Sed0007211 (gene) Chayote v1

Overview


Name	Sed0007211
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog A1C
Location	LG08: 35859308 .. 35863086 (+)
RNA-Seq Expression	Sed0007211
Synteny	Sed0007211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCAATTCAACAACCTCTAGGGCTAAGAAACCAAATAAAAAAACAAATTACCAAATCCAAAATTTGAAAAATAGACTTTGTCGTCCTCCTTGTCTAAGGAATTTTTTGTTCCAACATCACAATCTTCAACACACAGAAAAAAACAGGACCCCTAAAAAAGCGCACACTCACACAGAGATCTGATACTACCAATTCCACATTCCTCTCTTCACACTCCAAACGAAATTTGCAATGGCCGGTTACAAAGCTGAAGATGACTATGACTACCTCTTCAAGGTGGTTCTGATCGGAGATTCCGGTGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGTCTTGAATCCAAGTCCACCATTGGGGTTGAGTTCGCTACTCGGAGCTTGAATGTCGATGACAAGGTCGTTAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTTTGTCAAGTTTCTCTTCTTTTTACTCTGTTCATTTTTAGATCTGGGTGCTTCTTATTTTTGCTTAGATTTTTGTGGTGTTATTAGGAATGGCCAATAGAAGATTTGGGTAATGCTGTTTTTGAATGATTAGGCTTAATTGAGTGGTGAAATGTGAAGTTTATGATGGGTTACTTATATCATGTCTTTGCCTATTCACTAAATTGATGTTTTAGGCATTAAAACTGTAATGGGTTCTTACTAAATTAGTGGATCTGCTTTTTATGGTTACGTCTCTAATACATTGAACTTTGAAGTACGAAAATGGTTATAGTTCTGTAATTTTGTATGCAATGGGAGACATTTCAAGAGAAGTTAATCGAAAGGTTTTAGTACAACTATTATTAAGTTTCTGGAAACTGTTTAAGAGAATTTAGGCATCTTATCGCAATAGCTGAAGAATTGTTGCAATAGATGAATGTTGTATCTTACTTCAACTTGCCTCCCAAATAAAGATGATAATTTTTTTGTGGGATTTTTCATTAGTACAAATAACTTCATGAAATGCTGAGATCTGTCCGAAAACAATTGTGATTAGATCACGTAGCTTCCCAAGTCTGGGCCTGAGAAATTTTTTTTATAAAAGGATTGAAGGTTTGGTAGTTCCATAAAAACAAACTCGGGATCATCTGCAAGTTTAATTCTTTTGTTGGACATAGTGAGGTTGTATAGTTTGCTCATTGGAAAGATGTGGCACTAGGTATCGAGATTGAAACGACATCTATGAAGCTTAACTCGAAAGCTTCGATATCTTGACAAACATAAATTGATTTTGATATTGTTATTGCTGCTGAGTTTAGTTGTTTGTCATGGTTTCTTCAGATCATGGGCATAGAAATGGAGATCCATGTGTTATAGTGTGTCCCAACACAAGCGTGAGACAACATTATCTTTCCTTCATTATTGAATAATTATGGATATATCTTTCAAGTTTTAACTACCAGGGATTGGCCCAAAGGTCAAAACACGAGTTACAAAACTAGATAGATGCTTTTGAAGTATGGAATCAAACCATGATAACCCCTGCGCCTTGCCCCATATTTACGATTACTTTTCTTTATACATTTGTCTTTCCATTTCAATGATAAACAATGCAAGTTCAAGCAGTGCAGGCCCCTCAAGTTGAGACATAACCCAATGCTAACTGCTCACTTTGCTCTTCTGTCCATACGTATGCTTATGATGATGGTGCATGTATGTGTGCATGTGTCCATGAACTAACACCTACTCAACCCCCAACTAGCATGGCTTGGCCTAATGGTGAAGAGGGTCTTGGGGAACCAAAAGTTTATGGGTTCAATTCAATCCATAATAACCACCTACCTAGAAATTAATTTTCTACGGAGTTCCTTGACACCCAAATGTTATAGAGTCAAATGGGTTATTTTTTTAGAATAGTCAAAGTATGCGTAAGCTGACTCAGACATTCATAAATATCAAATTAAAAAACACCTACCCCCACTCTTCATGGTCTCCAACAGGTGGCATAGTGATTGAAGACTTAGGCTTTGAAGGTATGCTTCCTTTTCAAGATCCCAGTATCGAGACTCACCTGTGACATTACTCCTTCGATGTCTCCCGGTGCTTGGCTTAGGGATGGGCGTAGTTACCCTTGTTTCAAAAAAAAAATTGAAAATGTTTGCAGTTTTTTTTTCATGTTCAGAAGTTGTATTTTGTCCCTTCTATATTTCATATTTAGAGCATGTCCATTTCCAGTGCATTTTGTCATTATAAAGTATTGATTCTACCTATTCAGAGAGGTGCAAATCAATCCTCTTTGTAGATGTAAAGGGAATTACAAACAGGGCAAGAGATTTTTTTATTTCCTATTTTTTGACAAAATAAATATGCACCATCTTTCAACAAAAAGAGAAACATTTATCTCCCTTTGTCGACTGTAGGATTTTCTCAGATTGTCAGATGCAAAATATGAGCTTATCTTTGTGTTTGCTCAAACTCAAAGGAAAGTGTGACTTAAAACTCTTTATTCTAGTAGTTGTCAGCATTCCATGATTCTCATTGGTTTCAAACCTCGTAAGGTTGCATGTGATAAGCTATAACCTTAAAAATGAACTAATGATTTAATTGTATTCCTGCTATTATCTGTGGTAGAAAAGGAGAAAGAGTTGTATTGTAAACAAGATTTCTTTGCTGATCCAATTCTTTAGCTGATCATTAGTAGGGTTTATGATAGATTTGGGCTTTAGGAATATTAAAGAATAATACGAGGGCCTTTATGCAATTAGTTAGAGAGTTAGTTACATAGAGTTGTTATAAATAAAGAGGGTTACTTAGTGAGGAGGTATCTTTGAATTGTATGAGAATTAGGGCTTGAGAGATCTCAAGAGTCTAGGGAGGGTCGAAGTACCTCGAATCACTTGGTTTATCGTGTATGCTCGTGATGTTTTGCTAATAGATAGATCCAGATTCTATCAGTTTATTTTGATGTTACAATCAAGTGATTGATGTGATATTTCTAATTTTCCCCATTTTGTCTTCTGAACCATGAAGTTTCTTTAACACACATTCCTGCCTCACTCTCTGTGAACTGACCATCTCTTTTGGGGTTCATAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGCGCCATAGGTGCATTGCTTGTCTATGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAAGGAGTTGCGAGACCATACAGATCCCAACATTGTCGTCATGCTCATTGGTAACAAGTCAGATCTTCGACACCTTGTTGCAGTCTCAACAGAGGATGGGAAATCCTTTGCTGAGAAGGAGTCTCTGTATTACATGGAAACATCAGCACTCGAAGCAACCAATGTCGAGAACGCGTTTGCCGAAGTCCTTACTCAAATCTATCACATTGTAAGCAAGAAGGCCATGGAGGCTGGTGATGAGGCAGCTGCTGCCTCGGTTCCTTCGAAAGGAGAAAAAATCGATGTCGGTAAGGATGTTTCTGCTGTAAAGAAAGGTGGCTGCTGTTCAAGTTAGGCTTTTGATTTGCATTTGTTTGATGTGGCTGCTTTGATATTGCTGCATCCTCATGTGCCCCCATAGTTCAGTAGAAATTCTTCAGAGATGTCTTTTATATGAATCATTGATGCTGTATGGATTGGATTGCGTTTACATTAAAATATTTTTTAGGCCTGAAAATTTACAGTTTGAGCCGAGAGAGAGCTTGGTTAGGATGGATTACTATCATTAAACCAATTGTTAAGGTGACACATTCGTCTAATTCAAATTAACCCAATTAATTTAAATATTGACA

mRNA sequence

CGTCAATTCAACAACCTCTAGGGCTAAGAAACCAAATAAAAAAACAAATTACCAAATCCAAAATTTGAAAAATAGACTTTGTCGTCCTCCTTGTCTAAGGAATTTTTTGTTCCAACATCACAATCTTCAACACACAGAAAAAAACAGGACCCCTAAAAAAGCGCACACTCACACAGAGATCTGATACTACCAATTCCACATTCCTCTCTTCACACTCCAAACGAAATTTGCAATGGCCGGTTACAAAGCTGAAGATGACTATGACTACCTCTTCAAGGTGGTTCTGATCGGAGATTCCGGTGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGTCTTGAATCCAAGTCCACCATTGGGGTTGAGTTCGCTACTCGGAGCTTGAATGTCGATGACAAGGTCGTTAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGCGCCATAGGTGCATTGCTTGTCTATGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAAGGAGTTGCGAGACCATACAGATCCCAACATTGTCGTCATGCTCATTGGTAACAAGTCAGATCTTCGACACCTTGTTGCAGTCTCAACAGAGGATGGGAAATCCTTTGCTGAGAAGGAGTCTCTGTATTACATGGAAACATCAGCACTCGAAGCAACCAATGTCGAGAACGCGTTTGCCGAAGTCCTTACTCAAATCTATCACATTGTAAGCAAGAAGGCCATGGAGGCTGGTGATGAGGCAGCTGCTGCCTCGGTTCCTTCGAAAGGAGAAAAAATCGATGTCGGTAAGGATGTTTCTGCTGTAAAGAAAGGTGGCTGCTGTTCAAGTTAGGCTTTTGATTTGCATTTGTTTGATGTGGCTGCTTTGATATTGCTGCATCCTCATGTGCCCCCATAGTTCAGTAGAAATTCTTCAGAGATGTCTTTTATATGAATCATTGATGCTGTATGGATTGGATTGCGTTTACATTAAAATATTTTTTAGGCCTGAAAATTTACAGTTTGAGCCGAGAGAGAGCTTGGTTAGGATGGATTACTATCATTAAACCAATTGTTAAGGTGACACATTCGTCTAATTCAAATTAACCCAATTAATTTAAATATTGACA

Coding sequence (CDS)

ATGGCCGGTTACAAAGCTGAAGATGACTATGACTACCTCTTCAAGGTGGTTCTGATCGGAGATTCCGGTGTGGGCAAGTCCAATTTGCTCTCCAGGTTCACCAAAAACGAGTTCAGTCTTGAATCCAAGTCCACCATTGGGGTTGAGTTCGCTACTCGGAGCTTGAATGTCGATGACAAGGTCGTTAAGGCCCAGATTTGGGATACTGCTGGCCAGGAAAGGTATCGTGCAATAACCAGTGCTTACTATCGAGGCGCCATAGGTGCATTGCTTGTCTATGATGTCACACGACATTCCACTTTTGAAAACGTCGAGAGGTGGTTAAAGGAGTTGCGAGACCATACAGATCCCAACATTGTCGTCATGCTCATTGGTAACAAGTCAGATCTTCGACACCTTGTTGCAGTCTCAACAGAGGATGGGAAATCCTTTGCTGAGAAGGAGTCTCTGTATTACATGGAAACATCAGCACTCGAAGCAACCAATGTCGAGAACGCGTTTGCCGAAGTCCTTACTCAAATCTATCACATTGTAAGCAAGAAGGCCATGGAGGCTGGTGATGAGGCAGCTGCTGCCTCGGTTCCTTCGAAAGGAGAAAAAATCGATGTCGGTAAGGATGTTTCTGCTGTAAAGAAAGGTGGCTGCTGTTCAAGTTAG

Protein sequence

MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSKKAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS

Homology

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BLAST of Sed0007211 vs. NCBI nr
Match: XP_022954901.1 (ras-related protein RABA1c [Cucurbita moschata] >XP_023541694.1 ras-related protein RABA1c [Cucurbita pepo subsp. pepo] >KAG6573325.1 Ras-related protein RABA1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 211/218 (96.79%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAG++AAAASVPSKGEKIDVGKDVSAVKKGGCCSS
Sbjct: 181 KAMEAGEDAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. NCBI nr
Match: KAG7012493.1 (Ras-related protein RABA1c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 211/218 (96.79%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 607 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 666

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 667 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 726

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 727 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 786

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAG++AAAASVPSKGEKIDVGKDVSAVKKGGCCSS
Sbjct: 787 KAMEAGEDAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 824

[Close]

BLAST of Sed0007211 vs. NCBI nr
Match: XP_022994888.1 (ras-related protein RABA1c [Cucurbita maxima])

HSP 1 Score: 414.8 bits (1065), Expect = 4.5e-112
Identity = 210/218 (96.33%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           K MEAG++AAAASVPSKGEKIDVGKDVSAVKKGGCCSS
Sbjct: 181 KTMEAGEDAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. NCBI nr
Match: XP_038895845.1 (ras-related protein RABA1c [Benincasa hispida])

HSP 1 Score: 410.6 bits (1054), Expect = 8.4e-111
Identity = 208/218 (95.41%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLY+METSALEATNVEN+FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAGD AAAAS+PSKGEKIDVGKDVSAVKK GCCSS
Sbjct: 181 KAMEAGDGAAAASIPSKGEKIDVGKDVSAVKKAGCCSS 218

[Close]

BLAST of Sed0007211 vs. NCBI nr
Match: XP_007025321.1 (PREDICTED: ras-related protein RABA1c [Theobroma cacao] >XP_021293934.1 ras-related protein RABA1c [Herrania umbratica] >EOY27943.1 RAB GTPase A1C [Theobroma cacao])

HSP 1 Score: 407.1 bits (1045), Expect = 9.3e-110
Identity = 205/218 (94.04%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAVSTEDGKSFAEKESLY+METSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAME GDE AA++VPSKGEKIDV KDVSA+KKGGCCSS
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-107
Identity = 197/218 (90.37%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+A+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV TED KSFAEKESLY+METSALEATNVENAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEA  E  +A+VPSKG+KID+GKDVSAVKKGGCCS+
Sbjct: 181 KAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.1e-104
Identity = 191/218 (87.61%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+A+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNV++K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV TED KSFAE ESLY+METSALE+TNVENAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAG++  + +VPSKGEKIDV  DVSAVKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 8.8e-103
Identity = 189/216 (87.50%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 2   AGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKV 61
           AGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL VD KV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 121
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWLKELRDHTDPNIVV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSKK 181
           ML+GNKSDLRHLVAV T++GK+FAE+ESLY+METSALE+TNVENAFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCS 218
           ++EAGD+  A S P KGEKI++  DVSAVKKGGCCS
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216

[Close]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.8e-98
Identity = 178/218 (81.65%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           M GY+ +D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT++LNVD K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTR +TFEN  RWLKELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAV TEDGKSFAE+ESLY+METSALEATNVENAF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           +A+EAGD  +++ +PSKG+ I+V +D S +K+ GCCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 6.5e-98
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+A+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D+K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRH T+ENV RWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAVST++ K  AE+E LY+METSALEATNVENAF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KA+EAGDE A +S P KGE I++  + S+ KK GCCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy TrEMBL
Match: A0A6J1GS83 (ras-related protein RABA1c OS=Cucurbita moschata OX=3662 GN=LOC111457023 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.4e-113
Identity = 211/218 (96.79%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAG++AAAASVPSKGEKIDVGKDVSAVKKGGCCSS
Sbjct: 181 KAMEAGEDAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy TrEMBL
Match: A0A6J1K6C3 (ras-related protein RABA1c OS=Cucurbita maxima OX=3661 GN=LOC111490479 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 210/218 (96.33%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDSK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           K MEAG++AAAASVPSKGEKIDVGKDVSAVKKGGCCSS
Sbjct: 181 KTMEAGEDAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy TrEMBL
Match: A0A6J1B5U0 (ras-related protein RABA1c OS=Herrania umbratica OX=108875 GN=LOC110423856 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 205/218 (94.04%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAVSTEDGKSFAEKESLY+METSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAME GDE AA++VPSKGEKIDV KDVSA+KKGGCCSS
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy TrEMBL
Match: A0A061GEU5 (RAB GTPase A1C OS=Theobroma cacao OX=3641 GN=TCM_029653 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 205/218 (94.04%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+AEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAVSTEDGKSFAEKESLY+METSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAME GDE AA++VPSKGEKIDV KDVSA+KKGGCCSS
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. ExPASy TrEMBL
Match: A0A6P5X6Y8 (ras-related protein RABA1d OS=Durio zibethinus OX=66656 GN=LOC111280898 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.9e-110
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNVD K
Sbjct: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VMLIGNKSDLRHLVAVSTEDGKSFAEKESLY+METSALEATNVENAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAME GDE  A++VPSKGEKIDV KDVSA+KKGGCCSS
Sbjct: 181 KAMETGDEGGASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of Sed0007211 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 390.6 bits (1002), Expect = 8.4e-109
Identity = 197/218 (90.37%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+A+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV TED KSFAEKESLY+METSALEATNVENAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEA  E  +A+VPSKG+KID+GKDVSAVKKGGCCS+
Sbjct: 181 KAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Sed0007211 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 378.3 bits (970), Expect = 4.3e-105
Identity = 191/218 (87.61%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+A+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLNV++K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHSTFENVERWL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV TED KSFAE ESLY+METSALE+TNVENAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           KAMEAG++  + +VPSKGEKIDV  DVSAVKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Sed0007211 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-97
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MAGY+ EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTR +TFENV+RWLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHL+AV TEDGKS+AE+ESL +METSALEATNVE+AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGKDVSAVKKGGCCSS 219
           K +EAG++   ASVP KGEKI+V  DVSA+KK GCCS+
Sbjct: 181 KQVEAGED-GNASVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Sed0007211 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-94
Identity = 172/220 (78.18%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MA Y+A+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRH TFENVERWLKELRDHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           +M +GNK+DLRHL AVSTED K+FAE+E+ ++METSALE+ NVENAF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGK--DVSAVKKGGCCSS 219
           KA++ GD+ AA     KG+ I+VG   DVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAAL---PKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Sed0007211 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 335.5 bits (859), Expect = 3.2e-92
Identity = 169/220 (76.82%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAGYKAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
           MA Y+A+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAIGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGA+GALLVYDVTRH TFENVERWLKELRDHT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYYMETSALEATNVENAFAEVLTQIYHIVSK 180
           +ML+GNK+DLRHL AVSTED K+FAE+E+ ++METSALEA NVENAF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAMEAGDEAAAASVPSKGEKIDVGK--DVSAVKKGGCCSS 219
           KA++ GD+        KG+ I+VG   DVS VKK GCCSS
Sbjct: 181 KALDIGDDHTTL---PKGQSINVGSKDDVSEVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Sed0007211 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954901.1	1.5e-112	96.79	ras-related protein RABA1c [Cucurbita moschata] >XP_023541694.1 ras-related prot...	[more]
KAG7012493.1	1.5e-112	96.79	Ras-related protein RABA1c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022994888.1	4.5e-112	96.33	ras-related protein RABA1c [Cucurbita maxima]	[more]
XP_038895845.1	8.4e-111	95.41	ras-related protein RABA1c [Benincasa hispida]	[more]
XP_007025321.1	9.3e-110	94.04	PREDICTED: ras-related protein RABA1c [Theobroma cacao] >XP_021293934.1 ras-rela...	[more]

BLAST of Sed0007211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK68	1.2e-107	90.37	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q9SN35	6.1e-104	87.61	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]
P40393	8.8e-103	87.50	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]
Q40194	3.8e-98	81.65	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q01111	6.5e-98	81.65	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]

BLAST of Sed0007211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS83	7.4e-113	96.79	ras-related protein RABA1c OS=Cucurbita moschata OX=3662 GN=LOC111457023 PE=4 SV...	[more]
A0A6J1K6C3	2.2e-112	96.33	ras-related protein RABA1c OS=Cucurbita maxima OX=3661 GN=LOC111490479 PE=4 SV=1	[more]
A0A6J1B5U0	4.5e-110	94.04	ras-related protein RABA1c OS=Herrania umbratica OX=108875 GN=LOC110423856 PE=4 ...	[more]
A0A061GEU5	4.5e-110	94.04	RAB GTPase A1C OS=Theobroma cacao OX=3641 GN=TCM_029653 PE=4 SV=1	[more]
A0A6P5X6Y8	5.9e-110	94.04	ras-related protein RABA1d OS=Durio zibethinus OX=66656 GN=LOC111280898 PE=4 SV=...	[more]

BLAST of Sed0007211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45750.1	8.4e-109	90.37	RAB GTPase homolog A1C	[more]
AT4G18800.1	4.3e-105	87.61	RAB GTPase homolog A1D	[more]
AT1G16920.1	1.5e-97	83.49	RAB GTPase homolog A1B	[more]
AT5G60860.1	5.8e-94	78.18	RAB GTPase homolog A1F	[more]
AT3G15060.1	3.2e-92	76.82	RAB GTPase homolog A1G	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 40.75 coord: 55..77 score: 53.16 coord: 37..53 score: 36.77 coord: 117..130 score: 50.7 coord: 14..35 score: 55.22
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 9.0E-26 score: 101.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.1E-110 score: 383.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 7.0E-6 score: 34.0
None	No IPR available	PANTHER	PTHR24073:SF1151	RAS-RELATED PROTEIN RABA1C	coord: 1..218
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..218
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.54179
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..189 score: 10.731699
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 2.6875E-128 score: 356.87
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 8.0E-13 score: 44.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 1.8E-61 score: 206.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..218 score: 16.219355
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 4.3E-72 score: 243.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 4.7E-38 score: 128.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007211.1	Sed0007211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding