Sed0007104 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGATGTCTGTAATTTCATGTGGATAACATAATGCTGCCATTCCCGTGATGTTTCCAATCACCATTCCAACAGTCACCCACTCCAAAAAAAAAAAAAACTTGCTCTTTTAACTTGTTTATCCTCTGCATTTTAGGATATAATCTGTTTCTCTTCTTCATTGGGTTGCTAAAGCTTTCCTTACAGAGCTCTCTCTGACATCAATGGCTGCGGTTGTTGCCAGTGACACGGCCGCGGTTCTTGCTTTGTCTCTAGTTGTCTTCTTTGCCTTATCTCGAGCACCCGGCTCTGCCGGAGTTCAGCTTTCTCCAACCCCAGCTGTTTCATCTCACAGAACTTCACAAAATATGTCTTCCTTTTTCCCTTCTCCAGTTGATGAATGGTCTTCTCCCATTTCTGCAGCGCCACAGTCGCCGGTGCCGGTCTCGGGCGAGTTCGTGGGGAGGAGTGGGTTCAGCTCTGTGAAGCTCAGTTATGGCATTTCAGCTTTTGGTCTGAGCATTTGTACTTTTTTAGTTTAAGAATGTTTCTTGGTGTTTGATTGGTTTACAGTGATGCTTTAGCCTTTTCTTGTACTTTGGATTGAGGATTTCATGTGTTTGATTTCTGTGAACTGAGATTTCTTCTCTTGGTTGAAATAAATGGTGATTTCCATTTGAAA AAACGATGTCTGTAATTTCATGTGGATAACATAATGCTGCCATTCCCGTGATGTTTCCAATCACCATTCCAACAGTCACCCACTCCAAAAAAAAAAAAAACTTGCTCTTTTAACTTGTTTATCCTCTGCATTTTAGGATATAATCTGTTTCTCTTCTTCATTGGGTTGCTAAAGCTTTCCTTACAGAGCTCTCTCTGACATCAATGGCTGCGGTTGTTGCCAGTGACACGGCCGCGGTTCTTGCTTTGTCTCTAGTTGTCTTCTTTGCCTTATCTCGAGCACCCGGCTCTGCCGGAGTTCAGCTTTCTCCAACCCCAGCTGTTTCATCTCACAGAACTTCACAAAATATGTCTTCCTTTTTCCCTTCTCCAGTTGATGAATGGTCTTCTCCCATTTCTGCAGCGCCACAGTCGCCGGTGCCGGTCTCGGGCGAGTTCGTGGGGAGGAGTGGGTTCAGCTCTGTGAAGCTCAGTTATGGCATTTCAGCTTTTGGTCTGAGCATTTGTACTTTTTTAGTTTAAGAATGTTTCTTGGTGTTTGATTGGTTTACAGTGATGCTTTAGCCTTTTCTTGTACTTTGGATTGAGGATTTCATGTGTTTGATTTCTGTGAACTGAGATTTCTTCTCTTGGTTGAAATAAATGGTGATTTCCATTTGAAA ATGGCTGCGGTTGTTGCCAGTGACACGGCCGCGGTTCTTGCTTTGTCTCTAGTTGTCTTCTTTGCCTTATCTCGAGCACCCGGCTCTGCCGGAGTTCAGCTTTCTCCAACCCCAGCTGTTTCATCTCACAGAACTTCACAAAATATGTCTTCCTTTTTCCCTTCTCCAGTTGATGAATGGTCTTCTCCCATTTCTGCAGCGCCACAGTCGCCGGTGCCGGTCTCGGGCGAGTTCGTGGGGAGGAGTGGGTTCAGCTCTGTGAAGCTCAGTTATGGCATTTCAGCTTTTGGTCTGAGCATTTGTACTTTTTTAGTTTAA MAAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVGRSGFSSVKLSYGISAFGLSICTFLV Homology
BLAST of Sed0007104 vs. NCBI nr
Match: XP_022934640.1 (uncharacterized protein LOC111441775 [Cucurbita moschata]) HSP 1 Score: 91.3 bits (225), Expect = 5.4e-15 Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Sed0007104 vs. NCBI nr
Match: XP_022983589.1 (uncharacterized protein LOC111482150 [Cucurbita maxima]) HSP 1 Score: 87.4 bits (215), Expect = 7.9e-14 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0
BLAST of Sed0007104 vs. NCBI nr
Match: KAF3966928.1 (hypothetical protein CMV_009015 [Castanea mollissima]) HSP 1 Score: 65.9 bits (159), Expect = 2.4e-07 Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Sed0007104 vs. NCBI nr
Match: XP_015570786.1 (uncharacterized protein LOC107260786 [Ricinus communis]) HSP 1 Score: 65.1 bits (157), Expect = 4.2e-07 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Sed0007104 vs. NCBI nr
Match: KAE8021266.1 (hypothetical protein FH972_007173 [Carpinus fangiana]) HSP 1 Score: 64.3 bits (155), Expect = 7.1e-07 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Sed0007104 vs. ExPASy TrEMBL
Match: A0A6J1F8A3 (uncharacterized protein LOC111441775 OS=Cucurbita moschata OX=3662 GN=LOC111441775 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.6e-15 Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Sed0007104 vs. ExPASy TrEMBL
Match: A0A6J1J7U9 (uncharacterized protein LOC111482150 OS=Cucurbita maxima OX=3661 GN=LOC111482150 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.8e-14 Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0
BLAST of Sed0007104 vs. ExPASy TrEMBL
Match: A0A5N6QUU6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007173 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.4e-07 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of Sed0007104 vs. ExPASy TrEMBL
Match: A0A2N9I0C8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46014 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.7e-07 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Sed0007104 vs. ExPASy TrEMBL
Match: A0A7N2KYA4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.2e-06 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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