Sed0007091 (gene) Chayote v1

Overview
NameSed0007091
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRetrotransposon protein
LocationLG06: 10881444 .. 10883008 (-)
RNA-Seq ExpressionSed0007091
SyntenySed0007091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTAGGTCGTTTGATGAGTTTTATGATCCAGAAACAGTCTCGACGGGTTCGCAAGGTAAAAATATTGAGGTGGATAACATTGAGTATGTTGAGCAATCGAATGAGTGGACAACATTCCGAGAAATGGTAGCTTCACATATGATGGCTACTTTGTGATCATCTATTTTTTTCTGTTAACTGTTTAGATGTTTTTGTTGTTGTTGTTGTTGTTTTTCTTTTTTAAAGTGAACTGTTTTGAATACTTAAGAACACCTTGTTTGTATTTTGTTTGAATTTTTTGATGTTAGTAGAATATGTGTTATGCTATTATTATTATTATTTTACTGTTGTTATATCCAAAAACATTTTTGAATATTTTAATCTAATCTTGTATTCCATATTCCCATCCCTTCAAAAAGTAATATGGCAAAGAAAGCAGAAATCAAGTGCAAGACATCAATGGACGAGCATCGAAGATGCTATTTTATTTGATGCGTTATTGGGTTTAGAAGCTCAACATCTAACCGCACCAAATGGGACCTTCCGTCCCAGTTACTTAGGAGCCCTCTTATTGGATATTCAAACGAAGATGCCAAATACTACACTAAATACTACGAGTATTGAATGCAAGGTTCGTACCCTAAAAAAACAGTATGCTGCCATCAAGGAAATGGTGGCCCCGGGTGGAAGTGGTTTCGGTTGGAATGAGGCTAGACAGTGTGTTGATATTGATAAAGACACATTCGATCTTTGGGTCAAGGTGTTTATACTTAACTTTATTTTTCAGAATAAAATATAAATTAAGGTAAATGTAATTGACATGGAAAAAAATGAATATATTTATGAGAACAAAATTGTTTTCAAATTATTGCTAAAAAAATAAGAAGAAAGTCTACCCATAAAATATTAAATGAAACATATTTGAAATAATATTTTCTTTACAACATAAAGAAAACTTAATTGAAAAATGACTCTTGTGAAACATTAGTTATTATTTGTCATCGAAGAAGAGCATGCATGAAAAGTGTCTTGGGAAAATGCATTGTTTTAATATATGGACTTCTTTTTGTTTTTTTTATCGACCCTATCTTCTCCAGCCCTTCTTATTTTTTTTCTTTCTTCTTCTCCTTCTTTCCCTTCCGTCTATTCTTCTCCCCTTCAATTGTTTTTCCTTTTCTTGCCTAAAAAACATGGGGTTATTTCTTGATTTGTTTTTCATTTTCAATTCTTTTTTTTCCTGAAGGAACAGTTACGATTCAGTGGCCTATTTTACTATTCATATATTAAAACATATGATTCACTTAATTTTCGATTCAAAATACACGTTTTCCTCGTTTCAATTTGTATCTTGGGTTTCGAATTGTTTATCCCACTTTTTTTTATATAACATTGCATTAATCATCATGTAACATACTATTATATCTCATACATTGCAGTCGCACCCGAATGCCGAAGGCCTATGGAGCAAGCCGTTTCCTCATTACCATGCACTGTCCTTAATATTCGGGAATGATATGTTAAAAGTCATCACTAGCCCATTGAAGTTTAGCCCAAAAATTATAAAAGCCCAATCATCATGA

mRNA sequence

ATGGGAATTAGGTCGTTTGATGAGTTTTATGATCCAGAAACAGTCTCGACGGGTTCGCAAGAAGCTCAACATCTAACCGCACCAAATGGGACCTTCCGTCCCAGTTACTTAGGAGCCCTCTTATTGGATATTCAAACGAAGATGCCAAATACTACACTAAATACTACGAGTATTGAATGCAAGGTTCGTACCCTAAAAAAACAGTATGCTGCCATCAAGGAAATGGTGGCCCCGGGTGGAAGTGGTTTCGGTTGGAATGAGGCTAGACAGTGTGTTGATATTGATAAAGACACATTCGATCTTTGGGTCAAGTCGCACCCGAATGCCGAAGGCCTATGGAGCAAGCCGTTTCCTCATTACCATGCACTGTCCTTAATATTCGGGAATGATATGTTAAAAGTCATCACTAGCCCATTGAAGTTTAGCCCAAAAATTATAAAAGCCCAATCATCATGA

Coding sequence (CDS)

ATGGGAATTAGGTCGTTTGATGAGTTTTATGATCCAGAAACAGTCTCGACGGGTTCGCAAGAAGCTCAACATCTAACCGCACCAAATGGGACCTTCCGTCCCAGTTACTTAGGAGCCCTCTTATTGGATATTCAAACGAAGATGCCAAATACTACACTAAATACTACGAGTATTGAATGCAAGGTTCGTACCCTAAAAAAACAGTATGCTGCCATCAAGGAAATGGTGGCCCCGGGTGGAAGTGGTTTCGGTTGGAATGAGGCTAGACAGTGTGTTGATATTGATAAAGACACATTCGATCTTTGGGTCAAGTCGCACCCGAATGCCGAAGGCCTATGGAGCAAGCCGTTTCCTCATTACCATGCACTGTCCTTAATATTCGGGAATGATATGTTAAAAGTCATCACTAGCCCATTGAAGTTTAGCCCAAAAATTATAAAAGCCCAATCATCATGA

Protein sequence

MGIRSFDEFYDPETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLNTTSIECKVRTLKKQYAAIKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGNDMLKVITSPLKFSPKIIKAQSS
Homology
BLAST of Sed0007091 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-27
Identity = 58/102 (56.86%), Postives = 74/102 (72.55%), Query Frame = 0

Query: 29  NGTFRPSYLGALLLDIQTKMPNTTLNTTSIECKVRTLKKQYAAIKEMVAPGGSGFGWNEA 88
           NGTFRP YL  L   +  K+P   LN  +IECKVR+LKKQY A+ EM++   SGF WNE 
Sbjct: 36  NGTFRPGYLQHLEQILHEKVPGCALNKNTIECKVRSLKKQYNAVSEMLSQ--SGFNWNEE 95

Query: 89  RQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
            +CV ++++ FDLWV+SHPNA+G+W KPFPHY  LS +FG D
Sbjct: 96  FKCVQVEREIFDLWVRSHPNAKGMWKKPFPHYDDLSAVFGKD 135

BLAST of Sed0007091 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 5.8e-26
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 0

Query: 29  NGTFRPSYLGALLLDIQTKMPNTTLNTTSIECKVRTLKKQYAAIKEMVAPGGSGFGWNEA 88
           NGTFRP YL  L   +  K+P   LN  +IECKVR+LKKQY A+ EM++   SG GWNE 
Sbjct: 82  NGTFRPGYLQHLEQILHEKVPGCALNHNTIECKVRSLKKQYNAVSEMLSQ--SGLGWNEE 141

Query: 89  RQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
            +CV ++++ FDLWV SHPNA+ +W+KPFPHY  LS IFG D
Sbjct: 142 FKCVHVEREIFDLWVWSHPNAKRMWNKPFPHYDDLSTIFGKD 181

BLAST of Sed0007091 vs. NCBI nr
Match: XP_038902479.1 (uncharacterized protein At2g29880-like [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-25
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 29  NGTFRPSYLGALLLDIQTKMPNTTLNTTSIECKVRTLKKQYAAIKEMVAPGGSGFGWNEA 88
           NGTFRP YL  L   +  K+P  TLN  +IECKVR+LKKQY  + EM++   SGF WNE 
Sbjct: 36  NGTFRPGYLQHLERILHEKVPGCTLNQNTIECKVRSLKKQYNIVSEMLSQ--SGFDWNEE 95

Query: 89  RQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
            +CV ++++ FDLWV SHPNA+ +W+KPFPHY   S +FG D
Sbjct: 96  FKCVQVEREIFDLWVLSHPNAKRMWNKPFPHYDDFSTVFGKD 135

BLAST of Sed0007091 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 0

Query: 29  NGTFRPSYLGALLLDIQTKMPNTTLNTTSIECKVRTLKKQYAAIKEMVAPGGSGFGWNEA 88
           NGTFR  YL  L   +  K+P   LN  +IECKVR+LKKQY A+ EM++   SGFGWNE 
Sbjct: 36  NGTFRLGYLQYLERILHEKVPGCALNQNTIECKVRSLKKQYNAVSEMLSQ--SGFGWNEE 95

Query: 89  RQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGNDMLKVITSPLKFSPKIIKA 148
            +CV ++K+ FDLWV+SH NA+G+W+K F HY  LS +FG D     T      P++ +A
Sbjct: 96  FKCVQVEKEIFDLWVRSHLNAKGMWNKSFLHYDDLSTVFGKDRANCHT------PEVCQA 149

Query: 149 QS 151
           +S
Sbjct: 156 ES 149

BLAST of Sed0007091 vs. NCBI nr
Match: XP_024022021.1 (uncharacterized protein LOC112091787 [Morus notabilis])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-24
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 0

Query: 27  APNGTFRPSYLGALLLDIQTKMPNTTLNT-TSIECKVRTLKKQYAAIKEMVAPGGSGFGW 86
           A NGTF+P YL  L   +  K+P   L     I+ +V+ LKKQY AI EM+ P GSGFGW
Sbjct: 80  ADNGTFKPGYLQQLEKMMNEKIPQCGLKAQPHIDSRVKILKKQYHAISEMLGPAGSGFGW 139

Query: 87  NEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           N+  +CV ++KD FD WVKSHP+A+GL +KPFP++  L L+FGND
Sbjct: 140 NDKDKCVVVEKDVFDEWVKSHPSAKGLRNKPFPYHDELGLVFGND 184

BLAST of Sed0007091 vs. ExPASy TrEMBL
Match: A0A5A7TGP1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00540 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.8e-23
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0

Query: 13  ETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLN-TTSIECKVRTLKKQYAA 72
           E VS G  ++      NGTFRP YL  L+  +  K+P   +  TT I+C+++TLK+ + A
Sbjct: 26  ELVSMGGWKSD-----NGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQA 85

Query: 73  IKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           I EM  P  SGFGWN+  +C+ ++K+ FD WV+SHP A+GL +KPFP+Y  L+ +FG D
Sbjct: 86  IAEMWGPACSGFGWNDEEKCIVVEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRD 139

BLAST of Sed0007091 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0

Query: 13  ETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLN-TTSIECKVRTLKKQYAA 72
           E VS G  ++      NGTFRP YL  L+  +  K+P   +  TT I+C+++TLK+ + A
Sbjct: 26  ELVSMGGWKSD-----NGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQA 85

Query: 73  IKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           I EM  P  SGFGWN+  +C+  +K+ FD WV+SHP A+GL +KPFP+Y  L+ +FG D
Sbjct: 86  IAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRD 139

BLAST of Sed0007091 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0

Query: 13  ETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLN-TTSIECKVRTLKKQYAA 72
           E VS G  ++      NGTFRP YL  L+  +  K+P   +  TT I+C+++TLK+ + A
Sbjct: 26  ELVSMGGWKSD-----NGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQA 85

Query: 73  IKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           I EM  P  SGFGWN+  +C+  +K+ FD WV+SHP A+GL +KPFP+Y  L+ +FG D
Sbjct: 86  IAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRD 139

BLAST of Sed0007091 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0

Query: 13  ETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLN-TTSIECKVRTLKKQYAA 72
           E VS G  ++      NGTFRP YL  L+  +  K+P   +  TT I+C+++TLK+ + A
Sbjct: 26  ELVSMGGWKSD-----NGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQA 85

Query: 73  IKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           I EM  P  SGFGWN+  +C+  +K+ FD WV+SHP A+GL +KPFP+Y  L+ +FG D
Sbjct: 86  IAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRD 139

BLAST of Sed0007091 vs. ExPASy TrEMBL
Match: A0A5D3BCN9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001070 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0

Query: 13  ETVSTGSQEAQHLTAPNGTFRPSYLGALLLDIQTKMPNTTLN-TTSIECKVRTLKKQYAA 72
           E VS G  ++      NGTFRP YL  L+  +  K+P   +  TT I+C+++TLK+ + A
Sbjct: 26  ELVSMGGWKSD-----NGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQA 85

Query: 73  IKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHALSLIFGND 131
           I EM  P  SGFGWN+  +C+  +K+ FD WV+SHP A+GL +KPFP+Y  L+ +FG D
Sbjct: 86  IAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRD 139

BLAST of Sed0007091 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 7.8e-05
Identity = 19/69 (27.54%), Postives = 36/69 (52.17%), Query Frame = 0

Query: 63  RTLKKQYAAIKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHA 122
           +TL+  + ++  ++     GF W++ RQ V  D   +D ++K HP++     K  P Y  
Sbjct: 71  KTLRNLFKSVNNLLIE--DGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKD 130

Query: 123 LSLIFGNDM 132
           L L++ + M
Sbjct: 131 LCLVYSDGM 137

BLAST of Sed0007091 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 44.7 bits (104), Expect = 7.8e-05
Identity = 19/69 (27.54%), Postives = 36/69 (52.17%), Query Frame = 0

Query: 63  RTLKKQYAAIKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPFPHYHA 122
           +TL+  + ++  ++     GF W++ RQ V  D   +D ++K HP++     K  P Y  
Sbjct: 71  KTLRNLFKSVNNLLIE--DGFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKD 130

Query: 123 LSLIFGNDM 132
           L L++ + M
Sbjct: 131 LCLVYSDGM 137

BLAST of Sed0007091 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 23/71 (32.39%), Postives = 39/71 (54.93%), Query Frame = 0

Query: 58  IECKVRTLKKQYAAIKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPF 117
           ++ +   L KQY  +K ++  G  GF W++  Q V  D   + L++K+HP A    +KP 
Sbjct: 66  LKSRYTNLWKQYNDVKCLLDHG--GFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKPV 125

Query: 118 PHYHALSLIFG 129
            ++  L LI+G
Sbjct: 126 LNFSDLCLIYG 134

BLAST of Sed0007091 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 23/71 (32.39%), Postives = 39/71 (54.93%), Query Frame = 0

Query: 58  IECKVRTLKKQYAAIKEMVAPGGSGFGWNEARQCVDIDKDTFDLWVKSHPNAEGLWSKPF 117
           ++ +   L KQY  +K ++  G  GF W++  Q V  D   + L++K+HP A    +KP 
Sbjct: 66  LKSRYTNLWKQYNDVKCLLDHG--GFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKPV 125

Query: 118 PHYHALSLIFG 129
            ++  L LI+G
Sbjct: 126 LNFSDLCLIYG 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887234.11.8e-2756.86uncharacterized protein LOC120077425 [Benincasa hispida][more]
XP_038892629.15.8e-2656.86uncharacterized protein At2g29880-like [Benincasa hispida][more]
XP_038902479.11.3e-2554.90uncharacterized protein At2g29880-like [Benincasa hispida][more]
XP_038896380.11.9e-2449.18uncharacterized protein LOC120084641 [Benincasa hispida][more]
XP_024022021.15.4e-2453.33uncharacterized protein LOC112091787 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGP13.8e-2345.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CWL21.1e-2245.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TRV11.1e-2245.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DCZ11.1e-2245.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BCN91.1e-2245.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT4G02210.17.8e-0527.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.27.8e-0527.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24960.11.0e-0432.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.21.0e-0432.39unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 29..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007091.1Sed0007091.1mRNA