Sed0007072 (gene) Chayote v1

Overview


Name	Sed0007072
Type	gene
Organism	Sechium edule (Chayote v1)
Description	glucuronoxylan 4-O-methyltransferase 1
Location	LG06: 19367605 .. 19368362 (+)
RNA-Seq Expression	Sed0007072
Synteny	Sed0007072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTTACAAGAAACAAAATCATACCTGTTCTCATATTGGTTCTGTCCACTCTCTCCATTCTCAGACTTTTTAGGATTGCACTTACAACATCTTCTCCATTCTCAGACTTGTTAGGATTCCCATCCGGGTTCGCAAAAAATCACGAACCCACCATTTCAGAGAAGGAACTCAAGCTTCTTTCAGATCTGATTGCCAAAAAAGCACCTTGCAAGCTCCTTGTCTTTGGATTAGAATTACAGTACCTTAACCTCTTGGCAATCAATGATGGTGGAAACAATGTTTTTTTCTAGAGGATGATCCCTACAAAATGAGCACATTCAAAATCAATTCGAATCGCACGCGAATGTACAAAGTTGATTACAAGCTTCATGGAGAAGAAGCTTACAAGTTGTTAAAGCATTCAAGAGGAGACAAATCATGTGCACCAAACTCAAGGCTTGGGAAATCATCAAACTGCCAACTTTCCTTGACAGATCTTCCAAGAGAAGTTTATGAAGTAAAATGGGATGTTGTGGTTGTGGATGGACCAAGAGGAGATAGCCTCAGGCACCAAGAAGAATGGCAACAATTTACATTGCTGCTATCATAGCAAGAGAAGGGAACAACACGGATGTAGTTGTACACGATATCGATCGGGGAGTTCCTTTGTGATGAAAACTTGATTTCCTCAAAAGGGAAACTCTGGATTTTCAGGATTAGAAATGAGATCAATTCTACTAGATTCTGCTCTGATAAAAACATTGTGATCCAGTAA

mRNA sequence

ATGAACTTTACAAGAAACAAAATCATACCTGTTCTCATATTGGTTCTGTCCACTCTCTCCATTCTCAGACTTTTTAGGATTGCACTTACAACATCTTCTCCATTCTCAGACTTGTTAGGATTCCCATCCGGGTTCGCAAAAAATCACGAACCCACCATTTCAGAGAAGGAACTCAAGCTTCTTTCAGATCTGATTGCCAAAAAAGCACCTTGCAAGCTCCTTGATGATCCCTACAAAATGAGCACATTCAAAATCAATTCGAATCGCACGCGAATGTACAAAGTTGATTACAAGCTTCATGGAGAAGAAGCTTACAAGTTGTTAAAGCATTCAAGAGGAGACAAATCATGTGCACCAAACTCAAGGCTTGGGAAATCATCAAACTGCCAACTTTCCTTGACAGATCTTCCAAGAGAAGTTTATGAAGTAAAATGGGATGTTGTGGTTTTGTACACGATATCGATCGGGGAGTTCCTTTGTGATGAAAACTTGATTTCCTCAAAAGGGAAACTCTGGATTTTCAGGATTAGAAATGAGATCAATTCTACTAGATTCTGCTCTGATAAAAACATTGTGATCCAGTAA

Coding sequence (CDS)

ATGAACTTTACAAGAAACAAAATCATACCTGTTCTCATATTGGTTCTGTCCACTCTCTCCATTCTCAGACTTTTTAGGATTGCACTTACAACATCTTCTCCATTCTCAGACTTGTTAGGATTCCCATCCGGGTTCGCAAAAAATCACGAACCCACCATTTCAGAGAAGGAACTCAAGCTTCTTTCAGATCTGATTGCCAAAAAAGCACCTTGCAAGCTCCTTGATGATCCCTACAAAATGAGCACATTCAAAATCAATTCGAATCGCACGCGAATGTACAAAGTTGATTACAAGCTTCATGGAGAAGAAGCTTACAAGTTGTTAAAGCATTCAAGAGGAGACAAATCATGTGCACCAAACTCAAGGCTTGGGAAATCATCAAACTGCCAACTTTCCTTGACAGATCTTCCAAGAGAAGTTTATGAAGTAAAATGGGATGTTGTGGTTTTGTACACGATATCGATCGGGGAGTTCCTTTGTGATGAAAACTTGATTTCCTCAAAAGGGAAACTCTGGATTTTCAGGATTAGAAATGAGATCAATTCTACTAGATTCTGCTCTGATAAAAACATTGTGATCCAGTAA

Protein sequence

MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGFPSGFAKNHEPTISEKELKLLSDLIAKKAPCKLLDDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVVLYTISIGEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

Homology

[Close]

BLAST of Sed0007072 vs. NCBI nr
Match: XP_023000903.1 (glucuronoxylan 4-O-methyltransferase 1 [Cucurbita maxima] >XP_023000904.1 glucuronoxylan 4-O-methyltransferase 1 [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 150/273 (54.95%), Postives = 170/273 (62.27%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH--- 60
           M+ TRNKI+PVL+L+LS+LSI RL RIALTTS  SP   +   P      SGF++NH   
Sbjct: 1   MSSTRNKILPVLVLILSSLSIFRLVRIALTTSYTSPLLAIALPPKLQRPISGFSRNHSRT 60

Query: 61  ---EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMST 120
              E TISEKE KLLS+LIAKK PC LL                        DDPYK+S 
Sbjct: 61  SANEATISEKEFKLLSNLIAKKVPCNLLFFGIESQYLNLSAVNPGGKNVFLEDDPYKLSI 120

Query: 121 FKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYE 180
           FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYE
Sbjct: 121 FKVNSNHTRMYKVDYKLHAEKAYKLLKHARGNKSCAPNSGLRNSSRCQLALTDLPREVYE 180

Query: 181 VKWDVVV-----------------LYTISI------------------------GEFLCD 195
           VKWDVVV                 +Y+ +I                         EFLCD
Sbjct: 181 VKWDVVVVDGPRGDSPLAPGRMATIYSAAIIAREGNTTDVVVHDIDRMIEKWYSWEFLCD 240

[Close]

BLAST of Sed0007072 vs. NCBI nr
Match: KAG6584154.1 (Protein IRREGULAR XYLEM 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019746.1 Protein IRREGULAR XYLEM 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.2 bits (622), Expect = 9.3e-61
Identity = 149/273 (54.58%), Postives = 169/273 (61.90%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH--- 60
           M+ TRNKI+PVL+L+LS+L I RL RIALTTS  SP   +   P      SGF++NH   
Sbjct: 45  MSSTRNKILPVLVLILSSLCIFRLVRIALTTSYTSPILAIALPPKLQRPISGFSRNHSRT 104

Query: 61  ---EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMST 120
              E TISEKE KLLS+LIAKK PC LL                        DDPYK+S 
Sbjct: 105 SANEATISEKEFKLLSNLIAKKVPCNLLFFGIESQYLNLSAVNPGGKNVFLEDDPYKLSI 164

Query: 121 FKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYE 180
           FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYE
Sbjct: 165 FKVNSNHTRMYKVDYKLHAEKAYKLLKHARGNKSCAPNSGLRNSSRCQLALTDLPREVYE 224

Query: 181 VKWDVVV-----------------LYTISI------------------------GEFLCD 195
           VKWDVVV                 +Y+ +I                         EFLCD
Sbjct: 225 VKWDVVVVDGPRGDSPLAPGRMATIYSAAIIAREGNTTDVVVHDIDRMIEKWYSWEFLCD 284

[Close]

BLAST of Sed0007072 vs. NCBI nr
Match: XP_022137311.1 (glucuronoxylan 4-O-methyltransferase 1 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 9.6e-58
Identity = 148/273 (54.21%), Postives = 167/273 (61.17%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN---- 60
           MNFTR KIIPVL+LVLS+LSILRL RIALTTSS  S L +  P        GF+ N    
Sbjct: 44  MNFTRKKIIPVLVLVLSSLSILRLVRIALTTSSTSSLLAIALPPKLQRPIFGFSINQSRA 103

Query: 61  --HEPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMST 120
             +E  ISEKE KLLS+LIAKKAPC LL                        DDPYK+ST
Sbjct: 104 SANEVAISEKEFKLLSNLIAKKAPCNLLVFGLESQYLNLSAINDGGKNVFLEDDPYKLST 163

Query: 121 FKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYE 180
           FKI+SN TR+YKVDYK   E+AYKLLKH+R +K+CAPNS L   S CQL+LTDLPREVYE
Sbjct: 164 FKISSNHTRIYKVDYKHPAEKAYKLLKHARQNKACAPNSGLKNLSKCQLALTDLPREVYE 223

Query: 181 VKWDVVV-----------------LYTISI------------------------GEFLCD 195
           VKWDVVV                 +Y+ +I                         EFLCD
Sbjct: 224 VKWDVVVVDGPIGDAPQAPGRMATIYSAAIIAREGNTTDVVIHDIDRMIEKWYSWEFLCD 283

[Close]

BLAST of Sed0007072 vs. NCBI nr
Match: XP_038895890.1 (glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 141/272 (51.84%), Postives = 168/272 (61.76%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH--- 60
           M+FTRNKI+PVL+L+LS+LSILRL RIALTTS  SP   +   P      SGF++NH   
Sbjct: 43  MSFTRNKILPVLVLILSSLSILRLVRIALTTSYTSPLLAIALPPKLQRPLSGFSENHRTS 102

Query: 61  --EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMSTF 120
             E  ISE E KLLS+LI +KAPC LL                        DDPYK+STF
Sbjct: 103 ANEAAISETEFKLLSNLIGEKAPCNLLFFGIEPQYLNLSAVNDGGKNVFLEDDPYKLSTF 162

Query: 121 KINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEV 180
           +++SN TRMYK+DYK H E+AYKLLK +RG+KSCAP+S L  SS C+L+LTDLP+EVYEV
Sbjct: 163 RVDSNHTRMYKIDYKFHAEKAYKLLKQARGNKSCAPDSGLRNSSKCKLALTDLPKEVYEV 222

Query: 181 KWDVVV-----------------LYTISI------------------------GEFLCDE 195
           KWDVVV                 +Y+ +I                         EFLCDE
Sbjct: 223 KWDVVVVDGPRGDSPHAPGRMATIYSAAIMAREGNTTDVVVHDTDRMIERWYSWEFLCDE 282

[Close]

BLAST of Sed0007072 vs. NCBI nr
Match: XP_008446235.1 (PREDICTED: protein IRX15-LIKE [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 8.1e-57
Identity = 142/271 (52.40%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH-- 60
           M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H  
Sbjct: 1   MSFTRNKLLPVLVLILSSLSILRLVRIALTTSNT-SPLLAIALPPKLQRPKSGFSEKHNR 60

Query: 61  ----EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMS 120
               E  IS KE KLLS+LIA+K PC LL                        DDPYK+S
Sbjct: 61  TSANEAAISGKEFKLLSNLIAEKTPCNLLFFGIESQYLNLSAVNDGGNNVFLEDDPYKLS 120

Query: 121 TFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVY 180
           TFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVY
Sbjct: 121 TFKVNSNHTRMYKVDYKFHAEKAYKLLKHARGNKSCAPDSGLRNSSKCKLALTDLPREVY 180

Query: 181 EVKWDVVV-----------------LYTISI------------------------GEFLC 192
           EVKWDVVV                 +Y+ +I                         EFLC
Sbjct: 181 EVKWDVVVVDGPRGDSPQAPGRMATIYSAAIIAREGNTTDVVVHDTDRMIEKWYSWEFLC 240

[Close]

BLAST of Sed0007072 vs. ExPASy TrEMBL
Match: A0A6J1KL98 (glucuronoxylan 4-O-methyltransferase 1 OS=Cucurbita maxima OX=3661 GN=LOC111495203 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 150/273 (54.95%), Postives = 170/273 (62.27%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH--- 60
           M+ TRNKI+PVL+L+LS+LSI RL RIALTTS  SP   +   P      SGF++NH   
Sbjct: 1   MSSTRNKILPVLVLILSSLSIFRLVRIALTTSYTSPLLAIALPPKLQRPISGFSRNHSRT 60

Query: 61  ---EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMST 120
              E TISEKE KLLS+LIAKK PC LL                        DDPYK+S 
Sbjct: 61  SANEATISEKEFKLLSNLIAKKVPCNLLFFGIESQYLNLSAVNPGGKNVFLEDDPYKLSI 120

Query: 121 FKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYE 180
           FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYE
Sbjct: 121 FKVNSNHTRMYKVDYKLHAEKAYKLLKHARGNKSCAPNSGLRNSSRCQLALTDLPREVYE 180

Query: 181 VKWDVVV-----------------LYTISI------------------------GEFLCD 195
           VKWDVVV                 +Y+ +I                         EFLCD
Sbjct: 181 VKWDVVVVDGPRGDSPLAPGRMATIYSAAIIAREGNTTDVVVHDIDRMIEKWYSWEFLCD 240

[Close]

BLAST of Sed0007072 vs. ExPASy TrEMBL
Match: A0A6J1C675 (glucuronoxylan 4-O-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC111008808 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.6e-58
Identity = 148/273 (54.21%), Postives = 167/273 (61.17%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN---- 60
           MNFTR KIIPVL+LVLS+LSILRL RIALTTSS  S L +  P        GF+ N    
Sbjct: 44  MNFTRKKIIPVLVLVLSSLSILRLVRIALTTSSTSSLLAIALPPKLQRPIFGFSINQSRA 103

Query: 61  --HEPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMST 120
             +E  ISEKE KLLS+LIAKKAPC LL                        DDPYK+ST
Sbjct: 104 SANEVAISEKEFKLLSNLIAKKAPCNLLVFGLESQYLNLSAINDGGKNVFLEDDPYKLST 163

Query: 121 FKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYE 180
           FKI+SN TR+YKVDYK   E+AYKLLKH+R +K+CAPNS L   S CQL+LTDLPREVYE
Sbjct: 164 FKISSNHTRIYKVDYKHPAEKAYKLLKHARQNKACAPNSGLKNLSKCQLALTDLPREVYE 223

Query: 181 VKWDVVV-----------------LYTISI------------------------GEFLCD 195
           VKWDVVV                 +Y+ +I                         EFLCD
Sbjct: 224 VKWDVVVVDGPIGDAPQAPGRMATIYSAAIIAREGNTTDVVIHDIDRMIEKWYSWEFLCD 283

[Close]

BLAST of Sed0007072 vs. ExPASy TrEMBL
Match: A0A5A7UNX6 (Protein IRX15-LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001790 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.9e-57
Identity = 142/271 (52.40%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH-- 60
           M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H  
Sbjct: 43  MSFTRNKLLPVLVLILSSLSILRLVRIALTTSNT-SPLLAIALPPKLQRPKSGFSEKHNR 102

Query: 61  ----EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMS 120
               E  IS KE KLLS+LIA+K PC LL                        DDPYK+S
Sbjct: 103 TSANEAAISGKEFKLLSNLIAEKTPCNLLFFGIESQYLNLSAVNDGGNNVFLEDDPYKLS 162

Query: 121 TFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVY 180
           TFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVY
Sbjct: 163 TFKVNSNHTRMYKVDYKFHAEKAYKLLKHARGNKSCAPDSGLRNSSKCKLALTDLPREVY 222

Query: 181 EVKWDVVV-----------------LYTISI------------------------GEFLC 192
           EVKWDVVV                 +Y+ +I                         EFLC
Sbjct: 223 EVKWDVVVVDGPRGDSPQAPGRMATIYSAAIIAREGNTTDVVVHDTDRMIEKWYSWEFLC 282

[Close]

BLAST of Sed0007072 vs. ExPASy TrEMBL
Match: A0A5D3BHK3 (Protein IRX15-LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004720 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.9e-57
Identity = 142/271 (52.40%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH-- 60
           M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H  
Sbjct: 43  MSFTRNKLLPVLVLILSSLSILRLVRIALTTSNT-SPLLAIALPPKLQRPKSGFSEKHNR 102

Query: 61  ----EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMS 120
               E  IS KE KLLS+LIA+K PC LL                        DDPYK+S
Sbjct: 103 TSANEAAISGKEFKLLSNLIAEKTPCNLLFFGIESQYLNLSAVNDGGNNVFLEDDPYKLS 162

Query: 121 TFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVY 180
           TFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVY
Sbjct: 163 TFKVNSNHTRMYKVDYKFHAEKAYKLLKHARGNKSCAPDSGLRNSSKCKLALTDLPREVY 222

Query: 181 EVKWDVVV-----------------LYTISI------------------------GEFLC 192
           EVKWDVVV                 +Y+ +I                         EFLC
Sbjct: 223 EVKWDVVVVDGPRGDSPQAPGRMATIYSAAIIAREGNTTDVVVHDTDRMIEKWYSWEFLC 282

[Close]

BLAST of Sed0007072 vs. ExPASy TrEMBL
Match: A0A1S3BF86 (protein IRX15-LIKE OS=Cucumis melo OX=3656 GN=LOC103489024 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.9e-57
Identity = 142/271 (52.40%), Postives = 164/271 (60.52%), Query Frame = 0


Query: 1   MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH-- 60
           M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H  
Sbjct: 1   MSFTRNKLLPVLVLILSSLSILRLVRIALTTSNT-SPLLAIALPPKLQRPKSGFSEKHNR 60

Query: 61  ----EPTISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMS 120
               E  IS KE KLLS+LIA+K PC LL                        DDPYK+S
Sbjct: 61  TSANEAAISGKEFKLLSNLIAEKTPCNLLFFGIESQYLNLSAVNDGGNNVFLEDDPYKLS 120

Query: 121 TFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVY 180
           TFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVY
Sbjct: 121 TFKVNSNHTRMYKVDYKFHAEKAYKLLKHARGNKSCAPDSGLRNSSKCKLALTDLPREVY 180

Query: 181 EVKWDVVV-----------------LYTISI------------------------GEFLC 192
           EVKWDVVV                 +Y+ +I                         EFLC
Sbjct: 181 EVKWDVVVVDGPRGDSPQAPGRMATIYSAAIIAREGNTTDVVVHDTDRMIEKWYSWEFLC 240

[Close]

BLAST of Sed0007072 vs. TAIR 10
Match: AT4G24910.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 127.9 bits (320), Expect = 9.0e-30
Identity = 91/275 (33.09%), Postives = 138/275 (50.18%), Query Frame = 0


Query: 3   FTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLG-----FPSGFAK----NHEPT- 62
           FT  K+IP+LI VLS+LS+LRL RI+  +SS             P+  ++    N  PT 
Sbjct: 41  FTVRKLIPLLIFVLSSLSVLRLLRISYKSSSKSQSSSSTTFRLSPADSSQQLRANEGPTA 100

Query: 63  ISEKELKLLSDLIAKKAPCKLL------------------------DDPYKMSTFK--IN 122
           + EKELKLLSD + +++PC +L                        D+P K+   K  +N
Sbjct: 101 LMEKELKLLSDTVTRRSPCNILVFGFAPQYLMLSSINTRGITVILEDEPAKIMIPKAEVN 160

Query: 123 SNRTRMYKVDY-KLHGEEAYKLLKHSRGDKSCAP--NSRLGKSSNCQLSLTDLPREVYEV 182
            N TR+Y + Y ++    AY LL+H+R + +CAP  N++   SS+C+L L DLP++V+  
Sbjct: 161 PNNTRIYSLKYHQMEVRNAYNLLQHARANPACAPNMNNQHQGSSDCKLELRDLPQQVHNT 220

Query: 183 KWDVVV-----------------LYTISI---------------------------GEFL 195
           KWDV+V                 +YT ++                            EFL
Sbjct: 221 KWDVIVVDGPRGDDLETPGRMGSIYTAAVLARKGSSNSTTDVFVHDVHRTAEKWLSWEFL 280

[Close]

BLAST of Sed0007072 vs. TAIR 10
Match: AT1G67330.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 51.6 bits (122), Expect = 8.2e-07
Identity = 40/165 (24.24%), Postives = 66/165 (40.00%), Query Frame = 0


Query: 73  LLDDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSR--LGKSSNCQ 132
           L +DP  +     ++   R + V Y+ H  EA +LL   + +  C P     +  +  C 
Sbjct: 127 LEEDPEWIEAVLKDAPSLRAHHVQYRTHLSEAGRLLSTYKNEPMCLPAKAFPIRYNEKCP 186

Query: 133 LSLTDLPREVYEVKWDVVV-----------------LYTISI------------------ 187
           L+LT LP E Y+ +WD+++                 +++ +I                  
Sbjct: 187 LALTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAAIFSSAIMARNRKGDGTTHVFLHDV 246

[Close]

BLAST of Sed0007072 vs. TAIR 10
Match: AT2G15440.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 51.6 bits (122), Expect = 8.2e-07
Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 75  DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLT 134
           + PY +S F+ ++     Y+V Y     +A KLL + +    C P   L   S+C+L + 
Sbjct: 142 ESPYSVSKFEQSNPGVEAYEVVYSTKVSQAKKLLGYYKTRPECRPVQNL-LFSDCKLGIN 201

Query: 135 DLPREVYEVKWDVVVL 151
           DLP  VYE+ WDV+++
Sbjct: 202 DLPNFVYEIDWDVILI 216

[Close]

BLAST of Sed0007072 vs. TAIR 10
Match: AT5G67210.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 41.6 bits (96), Expect = 8.5e-04
Identity = 47/207 (22.71%), Postives = 76/207 (36.71%), Query Frame = 0


Query: 53  ISEKELKLLSDLIAK-KAPCKLL------------------------DDPYKMSTFKINS 112
           +S  E+K +SD++ +   PC LL                        ++ Y  + F+   
Sbjct: 98  MSYGEMKSISDVLRRCSPPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIH 157

Query: 113 NRTRMYKVDYKLHGEEAYKLLK--HSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKW 172
               ++ V Y     EA +L+          C P   L   S+C+L L DLP  VY+V W
Sbjct: 158 PEIEVFDVQYTTKAREARELVSAVKEAARNECRPVQNL-LFSDCKLGLNDLPNHVYDVDW 217

Query: 173 DVVV-----------------LYTISI----------------------------GEFLC 187
           DV++                 ++T ++                             EFLC
Sbjct: 218 DVILVDGPRGDGGDVPGRMSSIFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLC 277

The following BLAST results are available for this feature:

BLAST of Sed0007072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000903.1	2.4e-61	54.95	glucuronoxylan 4-O-methyltransferase 1 [Cucurbita maxima] >XP_023000904.1 glucur...	[more]
KAG6584154.1	9.3e-61	54.58	Protein IRREGULAR XYLEM 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022137311.1	9.6e-58	54.21	glucuronoxylan 4-O-methyltransferase 1 [Momordica charantia]	[more]
XP_038895890.1	1.6e-57	51.84	glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida]	[more]
XP_008446235.1	8.1e-57	52.40	PREDICTED: protein IRX15-LIKE [Cucumis melo]	[more]

BLAST of Sed0007072 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0007072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KL98	1.2e-61	54.95	glucuronoxylan 4-O-methyltransferase 1 OS=Cucurbita maxima OX=3661 GN=LOC1114952...	[more]
A0A6J1C675	4.6e-58	54.21	glucuronoxylan 4-O-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7UNX6	3.9e-57	52.40	Protein IRX15-LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00...	[more]
A0A5D3BHK3	3.9e-57	52.40	Protein IRX15-LIKE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0...	[more]
A0A1S3BF86	3.9e-57	52.40	protein IRX15-LIKE OS=Cucumis melo OX=3656 GN=LOC103489024 PE=4 SV=1	[more]

BLAST of Sed0007072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24910.1	9.0e-30	33.09	Protein of unknown function (DUF579)	[more]
AT1G67330.1	8.2e-07	24.24	Protein of unknown function (DUF579)	[more]
AT2G15440.1	8.2e-07	34.21	Protein of unknown function (DUF579)	[more]
AT5G67210.1	8.5e-04	22.71	Protein of unknown function (DUF579)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021148	Polysaccharide biosynthesis domain	PFAM	PF04669	Polysacc_synt_4	coord: 75..150 e-value: 2.7E-16 score: 59.7
None	No IPR available	PANTHER	PTHR31444:SF34	GLUCURONOXYLAN 4-O-METHYLTRANSFERASE-LIKE PROTEIN (DUF579)	coord: 74..149 coord: 157..189
None	No IPR available	PANTHER	PTHR31444:SF34	GLUCURONOXYLAN 4-O-METHYLTRANSFERASE-LIKE PROTEIN (DUF579)	coord: 6..74
IPR006514	IRX15/IRX15L/IGXM	PANTHER	PTHR31444	OS11G0490100 PROTEIN	coord: 74..149 coord: 157..189
IPR006514	IRX15/IRX15L/IGXM	PANTHER	PTHR31444	OS11G0490100 PROTEIN	coord: 6..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007072.1	Sed0007072.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle