Sed0007070 (gene) Chayote v1

Overview


Name	Sed0007070
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CASP-like protein
Location	LG02: 49058913 .. 49060508 (-)
RNA-Seq Expression	Sed0007070
Synteny	Sed0007070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGTGGGAAGTTAGAAGTGATTCTTAGGGTTTGTGGGTTTGTGGTAGCCATTGTTGTGGGAGTTTCCAAACAAACCAAATTGGTTCCTGTTATTATCTCCCCCAATCTTCCTCCTCTTCACCTTCATGTGGTTGTTAAATGGCACTACTTGTCTGCTTTTCTGTAAGATTATGGTTTTCTTTTTTTAATCCATAATAAGCCCTCATTTGATAATCATTTTATTTTTATTTTTTTTTTTAAATTTAAGTCTACCATAATTACTTTACCTTATATTTTTCTTACTTATATATCTACATTTTATCTATATTTATAGAAATTAAACAAAAATTTAGAGAGAAAAAAAAACTTCAAAAAGTTTGTTTTTGTTTTTTTTTTAAATTTTATTACCATTCACATATTTTCTTCGGAAAAGGTAAAAATAAGTTTAAATTTCTAAAACAAAGAATCCAAGGATATCAAACGAGGCCTAAGATTTTTATGTTGAATCTAGATGTTCAAGTTTGAAATTATCTTTTAAAAAAGAAAGAGTTCTAATCTATTTGAACTTTTATGTATGTATTTTTCAAACTATTCTAGAAAGATAGGCTAATATAGTAAAGTTATTGTTTTTCTACCGATGGGATGGTGACCTCGTTGCTTGTCACGAGTTCGATCTCAAGATTTGAGATTTGACTCTCATTTATTTTAGAGTAGTAATATCTTCCATTTGTGGTCTTCCTCTCCCAACAATCATCGTATCATATATATTTTTTATTATTTAAATATCTATACCTTACCCATAATTTTAGAAACTAAAACAAAATTTGAAAAAAAAAAAAACTTCCAAAAAATTGTTATTGTTTTTTAATTTGATTAACATTCACATACTTTTTTAAGTAGAGATGGATATACCGTAAAAAAAAACACTTTTGAGGAACTTTTGAGTAAAAAAAAAACAAATGGTTATTAACCAGAACCTAAGATATTAATTAGATTTCATGGACGGATGCGAGTTCTGAATCTATCTTCTAAATTGTACTTAAAAATGTTAGTCGATATATTTTTTTTTAATTAAATAACTTTTTAGATTAATCTAATTCTACAACATTTGAATGTCAAAAAAATCTTAAAAAAAAATTAATTCATAAATATGTAGACACCATAAATCGAATTCATCACACCTTAACTTCTCAAAAATTAACTAGATTTTTTTTTTTTCAGTTATAATCATAATTATTAAACATTAAAATATTTTTTTTTTCTTTTGTGTAGGTACATTTTGGCGACAAATATAATAGCAAGTTTATATGGATTAATCTCGCTGATGATTACGTTAACAAACAAGAATAAGAGCAGTGTATTAACTTTAACGATCATCATTTTCGACACCGTGACGGTGGCGCTGCTCTCCTCCCGCGGCGGCGCCGTCATGGCCATCGGAATCATCGCCTACCACGGCAACTCGCACGTGAGGTGGAACAAAGTGTGCAACGCATTTGGTAGGTTTTGTAAGCTCGGGACTGTTTCTTCTGTTCTCTCCATTGTCGGAGCCGTAGTTTTTATGTTGCTAATTATATTGGCTGTTGTGGGCCTTCAGAAGAGGCCCAAATAA

mRNA sequence

ATGAGTGGTGGGAAGTTAGAAGTGATTCTTAGGGTTTGTGGGTTTGTGGTAGCCATTGTTGTGGGAGTTTCCAAACAAACCAAATTGGTTCCTGTTATTATCTCCCCCAATCTTCCTCCTCTTCACCTTCATGTGGTTGTTAAATGGCACTACTTGTCTGCTTTTCTGTACATTTTGGCGACAAATATAATAGCAAGTTTATATGGATTAATCTCGCTGATGATTACGTTAACAAACAAGAATAAGAGCAGTGTATTAACTTTAACGATCATCATTTTCGACACCGTGACGGTGGCGCTGCTCTCCTCCCGCGGCGGCGCCGTCATGGCCATCGGAATCATCGCCTACCACGGCAACTCGCACGTGAGGTGGAACAAAGTGTGCAACGCATTTGGTAGGTTTTGTAAGCTCGGGACTGTTTCTTCTGTTCTCTCCATTGTCGGAGCCGTAGTTTTTATGTTGCTAATTATATTGGCTGTTGTGGGCCTTCAGAAGAGGCCCAAATAA

Coding sequence (CDS)

ATGAGTGGTGGGAAGTTAGAAGTGATTCTTAGGGTTTGTGGGTTTGTGGTAGCCATTGTTGTGGGAGTTTCCAAACAAACCAAATTGGTTCCTGTTATTATCTCCCCCAATCTTCCTCCTCTTCACCTTCATGTGGTTGTTAAATGGCACTACTTGTCTGCTTTTCTGTACATTTTGGCGACAAATATAATAGCAAGTTTATATGGATTAATCTCGCTGATGATTACGTTAACAAACAAGAATAAGAGCAGTGTATTAACTTTAACGATCATCATTTTCGACACCGTGACGGTGGCGCTGCTCTCCTCCCGCGGCGGCGCCGTCATGGCCATCGGAATCATCGCCTACCACGGCAACTCGCACGTGAGGTGGAACAAAGTGTGCAACGCATTTGGTAGGTTTTGTAAGCTCGGGACTGTTTCTTCTGTTCTCTCCATTGTCGGAGCCGTAGTTTTTATGTTGCTAATTATATTGGCTGTTGTGGGCCTTCAGAAGAGGCCCAAATAA

Protein sequence

MSGGKLEVILRVCGFVVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK

Homology

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BLAST of Sed0007070 vs. NCBI nr
Match: XP_008438806.1 (PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein 1E1 [Cucumis melo var. makuwa] >TYK16123.1 CASP-like protein 1E1 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 7.5e-51
Identity = 120/174 (68.97%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MSG-GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAF 60
           MSG GKLEVILRV GF    V AIVVGV K+TK+VPV IS NLPP  + VV KW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  LYILATNIIASLYGLISLMITLTNKNKS-SVLTLTIIIFDTVTVALLSSRGGAVMAIGII 120
           +Y  ATN+IASLYGL+SLM+TL+NKN S +VLTL +I+ DTV+VALLSS  GA MAIG+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 AYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           AY GNSHVRWNKVC+ FG+FCK    S++LS+ GA+VF+LL+ILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Sed0007070 vs. NCBI nr
Match: XP_004134189.1 (CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009555 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 5.4e-49
Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MSG-GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAF 60
           MSG GKLEVILRV GF    V AIV+GV K+TK+VP+ IS NLPP  + VV KWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 61  LYILATNIIASLYGLISLMITLTNKNKS-SVLTLTIIIFDTVTVALLSSRGGAVMAIGII 120
           +Y+LATN+IAS YGL+SLM+TL+NKN+S +VLTL II+ DTVTVALLSS  GA +AIG++
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 121 AYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
            Y GNSHV WNKVC+ FGRFCK    S++LS+ GA+VF+LL+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

[Close]

BLAST of Sed0007070 vs. NCBI nr
Match: XP_023540313.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 9.2e-49
Identity = 112/170 (65.88%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 3   GGKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYI 62
           GGKLE +LRV GF    V AIVV + K+TK+VP  ISPNLP   + VV KWHYLSAF+Y+
Sbjct: 4   GGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYL 63

Query: 63  LATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 122
            A N+IASLYGL+SL I+L NKN+S++L L I I D V V LLSS  GA +AIGII YHG
Sbjct: 64  FAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHG 123

Query: 123 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           NSHVRWNKVC+ FGRFCK    +S LS+ GA+VFMLL+IL VVGLQKRPK
Sbjct: 124 NSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Sed0007070 vs. NCBI nr
Match: XP_022945099.1 (CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like protein 1E2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 3   GGKLEVILRVCGFVV----AIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYI 62
           GGKLE +LRV GFV+    AIVV + K+TK+VP  ISPNLP   + VV KWHYLSAF+Y+
Sbjct: 4   GGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAFVYL 63

Query: 63  LATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 122
            A N+IASLYGL++L I+L NKN+S++L L I I D V V LLSS  GA +AIGII YHG
Sbjct: 64  FAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHG 123

Query: 123 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           NSHVRWNKVC+ FGRFCK    +S LS+ GA+VFMLL+IL VVGLQKRPK
Sbjct: 124 NSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Sed0007070 vs. NCBI nr
Match: XP_022975464.1 (CASP-like protein 1E2 [Cucurbita maxima])

HSP 1 Score: 201.8 bits (512), Expect = 4.6e-48
Identity = 112/170 (65.88%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 3   GGKLEVILRVCGFVV----AIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYI 62
           GGKLE +LRV GFV+    AIVV + K+ K+VP  ISPNLP   + VV KWHYLSAF+Y+
Sbjct: 4   GGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAFVYL 63

Query: 63  LATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 122
            A N+IASL+GL+SL I+L NKN+S VL L I I D V V LLSS GGA +AIGII YHG
Sbjct: 64  FAANVIASLHGLLSLTISLANKNRSDVLALLITILDIVMVVLLSSSGGAAIAIGIIGYHG 123

Query: 123 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           NSHVRWNKVC+ FGRFCK    +S LS+ GA VFMLL+IL VVGLQKRPK
Sbjct: 124 NSHVRWNKVCDTFGRFCKQVAAASALSLAGATVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 79/167 (47.31%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 4   GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYIL 63
           G  +++LR+  F    V AIV+ V KQTKLVP+ +S + PPL++ +  KWH +SAF+Y L
Sbjct: 21  GVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFL 80

Query: 64  ATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGN 123
            TN IA  Y  +SL++ L N+ KS  L   I + DT  VALL S  GA  A+GI+ Y GN
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGN 140

Query: 124 SHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKR 167
           SHV WNKVCN FG+FC     S  +S++G++ F+LL+++ VV L +R
Sbjct: 141 SHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHRR 187

[Close]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 76/167 (45.51%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 4   GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYIL 63
           G  +++LR+  F    V AIV+ V KQTK+VP+ +S +LPPL + +  KWH +SA +Y L
Sbjct: 20  GVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFL 79

Query: 64  ATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGN 123
            TN IA  Y ++SL++ L N+ KS  L   I + D   VALL S  GA  A+G++ Y GN
Sbjct: 80  VTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGN 139

Query: 124 SHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKR 167
           SHV WNKVCN FG+FC     S  +S++G++ F+LL+I+  V L +R
Sbjct: 140 SHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHRR 186

[Close]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.9e-31
Identity = 76/165 (46.06%), Postives = 110/165 (66.67%), Query Frame = 0


Query: 8   VILRVCGFVV----AIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATNI 67
           ++LRV  FV+    AIV GV+ QT+ VP+ ++ ++PPL++ VV KWHYLSAF++ + +N 
Sbjct: 31  LVLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNA 90

Query: 68  IASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGNSHVR 127
           IA  Y  IS+M++   K     + LT+   D + VALL S  GA  AIG++ Y GNSHV+
Sbjct: 91  IACSYAAISVMLSFCGKKSMVPIILTL---DLLMVALLFSSNGAATAIGVMGYKGNSHVK 150

Query: 128 WNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           WNKVCN FG+FC     S VLS++G++VF+LL++L    L  + K
Sbjct: 151 WNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

[Close]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 0


Query: 1   MSGGKL---EVILRVCG----FVVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLS 60
           ++GGKL   +++LRV       V A+++GV KQTK+V + + P LPP+ + V  KW YLS
Sbjct: 22  VTGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLS 81

Query: 61  AFLYILATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGI 120
           AF+Y + +N IA  Y  +SL++++ N   +  L L I + D V VALL S  GA  AIG+
Sbjct: 82  AFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGL 141

Query: 121 IAYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKR 167
           + Y GNS VRW KVCN FG+FC    V+  LS  G + F LL+++A   L KR
Sbjct: 142 MGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

[Close]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-29
Identity = 74/163 (45.40%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 6   LEVILRVCGFVVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATNIIA 65
           L V+  V     AIV+GV KQTK+VP+ I   LP ++L V  KWHYLSAF Y +A+N IA
Sbjct: 34  LRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSVASNAIA 93

Query: 66  SLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGNSHVRWN 125
             Y  +SL++ ++   K  ++++ +I+ D + VA+L S  GA +AIG++ Y GNSHVRW 
Sbjct: 94  CSYAALSLVLAVS--GKKGIMSI-VIVLDLLMVAMLFSSNGAALAIGLMGYQGNSHVRWT 153

Query: 126 KVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           KVC+ FGRFC    VS  LS++G+++F+LL+ +  + L K+ K
Sbjct: 154 KVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

[Close]

BLAST of Sed0007070 vs. ExPASy TrEMBL
Match: A0A5A7U2H8 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00470 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.6e-51
Identity = 120/174 (68.97%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MSG-GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAF 60
           MSG GKLEVILRV GF    V AIVVGV K+TK+VPV IS NLPP  + VV KW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  LYILATNIIASLYGLISLMITLTNKNKS-SVLTLTIIIFDTVTVALLSSRGGAVMAIGII 120
           +Y  ATN+IASLYGL+SLM+TL+NKN S +VLTL +I+ DTV+VALLSS  GA MAIG+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 AYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           AY GNSHVRWNKVC+ FG+FCK    S++LS+ GA+VF+LL+ILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Sed0007070 vs. ExPASy TrEMBL
Match: A0A1S3AXE2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.6e-51
Identity = 120/174 (68.97%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MSG-GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAF 60
           MSG GKLEVILRV GF    V AIVVGV K+TK+VPV IS NLPP  + VV KW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  LYILATNIIASLYGLISLMITLTNKNKS-SVLTLTIIIFDTVTVALLSSRGGAVMAIGII 120
           +Y  ATN+IASLYGL+SLM+TL+NKN S +VLTL +I+ DTV+VALLSS  GA MAIG+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 AYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           AY GNSHVRWNKVC+ FG+FCK    S++LS+ GA+VF+LL+ILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Sed0007070 vs. ExPASy TrEMBL
Match: A0A0A0L8Y1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MSG-GKLEVILRVCGF----VVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAF 60
           MSG GKLEVILRV GF    V AIV+GV K+TK+VP+ IS NLPP  + VV KWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 61  LYILATNIIASLYGLISLMITLTNKNKS-SVLTLTIIIFDTVTVALLSSRGGAVMAIGII 120
           +Y+LATN+IAS YGL+SLM+TL+NKN+S +VLTL II+ DTVTVALLSS  GA +AIG++
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 121 AYHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
            Y GNSHV WNKVC+ FGRFCK    S++LS+ GA+VF+LL+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

[Close]

BLAST of Sed0007070 vs. ExPASy TrEMBL
Match: A0A6J1G003 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.6e-49
Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 3   GGKLEVILRVCGFVV----AIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYI 62
           GGKLE +LRV GFV+    AIVV + K+TK+VP  ISPNLP   + VV KWHYLSAF+Y+
Sbjct: 4   GGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAFVYL 63

Query: 63  LATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 122
            A N+IASLYGL++L I+L NKN+S++L L I I D V V LLSS  GA +AIGII YHG
Sbjct: 64  FAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHG 123

Query: 123 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           NSHVRWNKVC+ FGRFCK    +S LS+ GA+VFMLL+IL VVGLQKRPK
Sbjct: 124 NSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Sed0007070 vs. ExPASy TrEMBL
Match: A0A6J1IKK8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 112/170 (65.88%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 3   GGKLEVILRVCGFVV----AIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYI 62
           GGKLE +LRV GFV+    AIVV + K+ K+VP  ISPNLP   + VV KWHYLSAF+Y+
Sbjct: 4   GGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAFVYL 63

Query: 63  LATNIIASLYGLISLMITLTNKNKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 122
            A N+IASL+GL+SL I+L NKN+S VL L I I D V V LLSS GGA +AIGII YHG
Sbjct: 64  FAANVIASLHGLLSLTISLANKNRSDVLALLITILDIVMVVLLSSSGGAAIAIGIIGYHG 123

Query: 123 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKRPK 169
           NSHVRWNKVC+ FGRFCK    +S LS+ GA VFMLL+IL VVGLQKRPK
Sbjct: 124 NSHVRWNKVCDTFGRFCKQVAAASALSLAGATVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Sed0007070 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 6   LEVILRVCGFVVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATNIIA 65
           + V+  V   V A V+GV+KQTK+VP+ + P LPPL++    K  YLSAF+Y ++ N IA
Sbjct: 31  MRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIA 90

Query: 66  SLYGLISLMITLTNKNK-SSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGNSHVRW 125
             Y  IS++I + +K K S  L + ++I D + VALL S  GA  AIG++  HGN HV W
Sbjct: 91  CGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMW 150

Query: 126 NKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGL 164
            KVC  FG+FC    VS  ++++ +VVFMLL++L  + L
Sbjct: 151 KKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of Sed0007070 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 108.2 bits (269), Expect = 6.4e-24
Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 6   LEVILRVCGFVVAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATNIIA 65
           + V+  +     A V+GV+KQTK+V + + P LPPL +    K  YLSAF+Y ++ N IA
Sbjct: 31  MRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVNAIA 90

Query: 66  SLYGLISLMITLTNK-NKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGNSHVRW 125
             Y  IS+ I + ++  +S  L + +++ D V VALL S  GA  AIG++  HGN HV W
Sbjct: 91  CGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKHVMW 150

Query: 126 NKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGL 164
            KVC  FG+FC     S  L+++ AVVFM L++L  + L
Sbjct: 151 KKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of Sed0007070 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 39/162 (24.07%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 5   KLEVILRVCGFV----VAIVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILA 64
           KL + LR+  F+     AIV+ ++K+TK + V+ +    P+   +  K+ +  AF++ + 
Sbjct: 17  KLLLGLRIFAFMATLAAAIVMSLNKETKTL-VVATIGTVPIKATLTAKFQHTPAFVFFVI 76

Query: 65  TNIIASLYGLISLMITLTNK--NKSSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHG 124
            N++ S + L+ +++ + ++      +  L+I I D +   L+S+   A + +  +  +G
Sbjct: 77  ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNG 136

Query: 125 NSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAV 161
           N H +WNKVC+ F  +C  G  + + +  G ++ +L+  +++
Sbjct: 137 NKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSI 177

[Close]

BLAST of Sed0007070 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 57.8 bits (138), Expect = 9.9e-09
Identity = 48/167 (28.74%), Postives = 86/167 (51.50%), Query Frame = 0


Query: 7   EVILRVCGFVVA----IVVGVSKQTKLVPVIISPNLPPLHLHVVVKWHYLSAFLYILATN 66
           +V+LR   F       +V+  SKQTK + +  +P   P       ++    A +Y +   
Sbjct: 30  QVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIP-----AAEFTNSPALIYFVVAL 89

Query: 67  IIASLYGLISLMITLTNKNK---SSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIAYHGN 126
            +A  Y ++S  +T++   K   S+VL L + I D V V +++S  GA   +  +   GN
Sbjct: 90  SVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGN 149

Query: 127 SHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLIILAVVGLQKR 167
             VRW K+C+ + +FC+    +  +S+  +VV +LL I++V+ L K+
Sbjct: 150 KEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKK 191

[Close]

BLAST of Sed0007070 vs. TAIR 10
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 55.5 bits (132), Expect = 4.9e-08
Identity = 46/162 (28.40%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 5   KLEVILRVCGF----VVAIVVGVSKQTKL--VPVIISPNLPPLHLHVVVKWHYLSAFLYI 64
           K+++I RV  F       IV+  S QT++  +P + SP        V  +++   AF+Y 
Sbjct: 36  KIDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSP------APVSAEFNDSPAFIYF 95

Query: 65  LATNIIASLYGLISLMITLTNKNK---SSVLTLTIIIFDTVTVALLSSRGGAVMAIGIIA 124
           +   ++AS Y LIS +++++   K   ++  ++ +   D V + +L+S  G    +  IA
Sbjct: 96  VVALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIA 155

Query: 125 YHGNSHVRWNKVCNAFGRFCKLGTVSSVLSIVGAVVFMLLII 158
             GN  V WNK+CN + +FC+    S  LS+  +++ ++L I
Sbjct: 156 LKGNEEVGWNKICNVYDKFCRYIATSLALSLFASLLLLVLSI 191

The following BLAST results are available for this feature:

BLAST of Sed0007070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438806.1	7.5e-51	68.97	PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein ...	[more]
XP_004134189.1	5.4e-49	66.67	CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009...	[more]
XP_023540313.1	9.2e-49	65.88	CASP-like protein 1E2 [Cucurbita pepo subsp. pepo]	[more]
XP_022945099.1	1.6e-48	65.29	CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like ...	[more]
XP_022975464.1	4.6e-48	65.88	CASP-like protein 1E2 [Cucurbita maxima]	[more]

BLAST of Sed0007070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TBD0	1.1e-33	47.31	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6SZP8	1.1e-31	45.51	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9RT04	6.9e-31	46.06	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]
A7NW78	1.3e-29	44.51	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]
B9HMP6	3.8e-29	45.40	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]

BLAST of Sed0007070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2H8	3.6e-51	68.97	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXE2	3.6e-51	68.97	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1	[more]
A0A0A0L8Y1	2.6e-49	66.67	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1	[more]
A0A6J1G003	7.6e-49	65.29	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1	[more]
A0A6J1IKK8	2.2e-48	65.88	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1	[more]

BLAST of Sed0007070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	2.8e-27	44.65	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	6.4e-24	41.51	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	5.8e-09	24.07	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	9.9e-09	28.74	Uncharacterised protein family (UPF0497)	[more]
AT3G06390.1	4.9e-08	28.40	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..161 e-value: 1.0E-30 score: 104.6
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..150 e-value: 1.8E-27 score: 96.0
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 7..166
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0007070.1	Sed0007070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding