Sed0007042 (gene) Chayote v1

Overview
NameSed0007042
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDelta(12)-fatty-acid desaturase
LocationLG05: 10422635 .. 10424426 (-)
RNA-Seq ExpressionSed0007042
SyntenySed0007042
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAATTTTTACTGGCTCTGATCAATAATTATGGGATAAAATCATCCTTACAACAGCAGCTTAGTTTATAAAATCAAAACTTCACAATAATTACCTAGTTATTGTCATTAATTGGCTCTCCTTCATGTAATTTTGCTAGTTTGCTCATTTCGCCCTTTTCTTAATGAAGTATCCATTTTCTATTTAAAAAAAACGAATAGAGAATGAATTAGCTATTTAATAGAGATATATTGCAAACCATAGTGCTAAGATGACTAGAGTCCCCATATCCTTTTATTTAGCATTCGAATATACATAATTATTAATTATTAAAACTATCGAGATCAATCTCTTTTTTTTTTCTCAATTTGAATCTAGTATGACTTTAATCTTCGATGGTAGATTTAAAAGATCGTATAGTTATCTGGTAACCAAGAAAATATTGCACTTTATTAGTCACACTCTCATCATATTCATGAAAAATCTAAATGTTGTTCTGATACTAATGTGTAGAATTTGAATTCAAATAACAAAACAATAAACACGGATAAACAATCGCTCAAGCTTTTGCCTCGAGATTGATGAGACAATACATACAACAATTTCTCTAAAACACTTTCGTTTATTTCTCAATGTTTTTTTCTATAACTCTCTTACCCAACTATTTTTCTCTTCACTCTCTTTTGCTTTATGATTGTCTCTACAATTCATAAGGAATGAACTCCCCATTACAAACTTGGTCTCCAAGTTCTTTCCATAAATATTTTCCACTAATTGCTAAAACAATAAAATCTACTAATTCCTTAATTACTCTCCTAAATTGACCATTCATTTATTTCTTAATTGTCTACCCATTAATTCCTAAATTAATTATTCCATATTCCAAAAATACATTTAAGTTTATTCCAACGATCACATTCCTCACTACATTCGTCATGAATTTGGTTATTTACTTTATAATAAATATAAAGTAAAAAAAAAAAAAAGATAGCAAGAAAGGCCTTACATGGGTAACATGATAGTAAAATTGTTGTTTACTTAAATACAGAGAGTAAAGATATAATTTAGGTTAGTTTTGGGTTTGTACTCGGTGGCATAGTTAAATGTAGTCCATGTCACCGTTTGAAAGTGGGGTGGAGTGATTGTGGTCCCCTTTGTCGTCCACGTTATAGAAGGTGCTGCTTTGAAATACCCAAACTGCACTCCGTGGAAAACTCCATAGAAGATATCAAGCATGGGAGAGGCAAAAAGGCGTGGTTCAGGAACGAGCTCCCCACGCAAAGCCTCCTTTCACTCTGAGCCAAATCAAGAAAGCTATTCCTCCCCACTGCTTCCACCGCTCTGTTCTCCGCTCCTTCTCCCCCTCCGCCTCCTCGCATGGCCCCTCTACTGGCGTCTGGGTCATCTCCCACGAGTGCGGCCACCACGCCTTCTCCGACTACCAGTTACTCGACGACTTAGTCGGCCTCTTCTTCCACTTGCAGCACACGCATCCGGCGCTGCCGCACTACGAGTGTTCGGAGTGGGACTGGCTGAGAGGCGCCTTGGCGACCATGGACAGAGACTACGGGGTGCTCAACACAGTGTACGGACACGCATGTGGTTCACCATTTGTTCTCCACCATGCCGCATTATCATGCCAAGGAGGCCACCGAAGCGGTGAAGCCGCTGCTGGGAGAGTATTACCGCTTCGATAGGACGCCTATTTGGAAGGCCATTTGGAGGGAGGCTAAAGAGTGCGTTTATGTTGAGCCCGATCACGGCCCTGTTTCTCATAAAGGAGTCTTCTGGTTCCGTAAGAATCTCTGA

mRNA sequence

ATGGGAGAATTTTTACTGGCTCTGATCAATAATTATGGGATAAAATCATCCTTACAACAGCAGCTTACATGGGAGAGGCAAAAAGGCGTGGTTCAGGAACGAGCTCCCCACGCAAAGCCTCCTTTCACTCTGAGCCAAATCAAGAAAGCTATTCCTCCCCACTGCTTCCACCGCTCTGTTCTCCGCTCCTTCTCCCCCTCCGCCTCCTCGCATGGCCCCTCTACTGGCGTCTGGGTCATCTCCCACGAGTGCGGCCACCACGCCTTCTCCGACTACCAGTTACTCGACGACTTAGTCGGCCTCTTCTTCCACTTGCAGCACACGCATCCGGCGCTGCCGCACTACGAGTGTTCGGAGTGGGACTGGCTGAGAGGCGCCTTGGCGACCATGGACAGAGACTACGGGTGTACGGACACGCATGTGGTTCACCATTTGTTCTCCACCATGCCGCATTATCATGCCAAGGAGGCCACCGAAGCGGTGAAGCCGCTGCTGGGAGAGTATTACCGCTTCGATAGGACGCCTATTTGGAAGGCCATTTGGAGGGAGGCTAAAGAGTGCGTTTATGTTGAGCCCGATCACGGCCCTGTTTCTCATAAAGGAGTCTTCTGGTTCCGTAAGAATCTCTGA

Coding sequence (CDS)

ATGGGAGAATTTTTACTGGCTCTGATCAATAATTATGGGATAAAATCATCCTTACAACAGCAGCTTACATGGGAGAGGCAAAAAGGCGTGGTTCAGGAACGAGCTCCCCACGCAAAGCCTCCTTTCACTCTGAGCCAAATCAAGAAAGCTATTCCTCCCCACTGCTTCCACCGCTCTGTTCTCCGCTCCTTCTCCCCCTCCGCCTCCTCGCATGGCCCCTCTACTGGCGTCTGGGTCATCTCCCACGAGTGCGGCCACCACGCCTTCTCCGACTACCAGTTACTCGACGACTTAGTCGGCCTCTTCTTCCACTTGCAGCACACGCATCCGGCGCTGCCGCACTACGAGTGTTCGGAGTGGGACTGGCTGAGAGGCGCCTTGGCGACCATGGACAGAGACTACGGGTGTACGGACACGCATGTGGTTCACCATTTGTTCTCCACCATGCCGCATTATCATGCCAAGGAGGCCACCGAAGCGGTGAAGCCGCTGCTGGGAGAGTATTACCGCTTCGATAGGACGCCTATTTGGAAGGCCATTTGGAGGGAGGCTAAAGAGTGCGTTTATGTTGAGCCCGATCACGGCCCTGTTTCTCATAAAGGAGTCTTCTGGTTCCGTAAGAATCTCTGA

Protein sequence

MGEFLLALINNYGIKSSLQQQLTWERQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASSHGPSTGVWVISHECGHHAFSDYQLLDDLVGLFFHLQHTHPALPHYECSEWDWLRGALATMDRDYGCTDTHVVHHLFSTMPHYHAKEATEAVKPLLGEYYRFDRTPIWKAIWREAKECVYVEPDHGPVSHKGVFWFRKNL
Homology
[Close]
BLAST of Sed0007042 vs. NCBI nr
Match: Q84UB9.1 (RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii] >AAO37752.1 delta-12 oleate desaturase [Trichosanthes kirilowii])

HSP 1 Score: 249.2 bits (635), Expect = 3.1e-62
Identity = 153/369 (41.46%), Postives = 163/369 (44.17%), Query Frame = 0 

Query: 27  QKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS---------------- 86
           +KG VQER PHAKPPFTLSQIKK +PPHCFHRS+LRSFS   S                 
Sbjct: 2   EKG-VQERVPHAKPPFTLSQIKKVVPPHCFHRSLLRSFSYLLSDLAFVSLFFYLAIAYFP 61

Query: 87  -----------------HGPS-TGVWVISHECGHHAFSDYQLLDDLVGLFFH-------- 146
                             G S TGVWVI+HECGHHAFSDYQL+DD+VGLFFH        
Sbjct: 62  LLPHPFPYIAWPLYWIFQGCSLTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPYF 121

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 122 SWKYSHRRHHSNTGSLERDEVFVPKPKSQIPWYLKYFNNPPGRLISLIGTLTLGWPLYLA 181

Query: 207 ------------------------------------------------------------ 210
                                                                       
Sbjct: 182 FNMSGRPYDRFACHYDPYSPIFTKREWIQVYISDAGILGMAFMLYRIGVEKGSFWVMRIY 241

[Close]
BLAST of Sed0007042 vs. NCBI nr
Match: XP_022943671.1 (delta(12)-oleate desaturase [Cucurbita moschata])

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-60
Identity = 148/370 (40.00%), Postives = 160/370 (43.24%), Query Frame = 0 

Query: 26  RQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS--------------- 85
           + +  V ER PHAKPPFTLSQIKKAIPPHCFHRS+LRSFS   S                
Sbjct: 6   KMEKAVHERVPHAKPPFTLSQIKKAIPPHCFHRSLLRSFSCLISDLAFVSLFFYLAIAYL 65

Query: 86  ----HGPS---------------TGVWVISHECGHHAFSDYQLLDDLVGLFFH------- 145
               H  S               TGVWVI+HECGHHAFSDYQL+DD+VGLFFH       
Sbjct: 66  PLIPHPASYIAWPLYWVFQGCILTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPY 125

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 126 FSWKYSHRRHHSNTVSLERDEVFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYL 185

Query: 206 ------------------------------------------------------------ 210
                                                                       
Sbjct: 186 AFNVSGRPYDRFACHYDPHGPIFTKREWVQIYISDTGILGMCFVLYRIGVAKGALWVMRI 245

[Close]
BLAST of Sed0007042 vs. NCBI nr
Match: XP_023512996.1 (delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo] >XP_023522472.1 delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 148/370 (40.00%), Postives = 160/370 (43.24%), Query Frame = 0 

Query: 26  RQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS--------------- 85
           + +  V ER PHAKPPFTLSQIKKAIPPHCFHRS+LRSFS   S                
Sbjct: 6   KMEKAVHERVPHAKPPFTLSQIKKAIPPHCFHRSLLRSFSCLISDLAFVSLFFYLAIAYL 65

Query: 86  ----HGPS---------------TGVWVISHECGHHAFSDYQLLDDLVGLFFH------- 145
               H  S               TGVWVI+HECGHHAFSDYQL+DD+VGLFFH       
Sbjct: 66  PLIPHPASYIAWPFYWVFQGCILTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPY 125

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 126 FSWKYSHRRHHSNTGSLERDEVFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYL 185

Query: 206 ------------------------------------------------------------ 210
                                                                       
Sbjct: 186 AFNVSGRPYDRFACHYDPHGPIFTKREWVQIYISDTGILGMCLVLYRISVAKGALWVMRI 245

[Close]
BLAST of Sed0007042 vs. NCBI nr
Match: KAG6570369.1 (Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 148/370 (40.00%), Postives = 160/370 (43.24%), Query Frame = 0 

Query: 26  RQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS--------------- 85
           + +  V ER PHAKPPFTLSQIKKAIPPHCFHRS+LRSFS   S                
Sbjct: 6   KMEKAVHERVPHAKPPFTLSQIKKAIPPHCFHRSLLRSFSCLISDLAFVSLFFYLAIAYL 65

Query: 86  ----HGPS---------------TGVWVISHECGHHAFSDYQLLDDLVGLFFH------- 145
               H  S               TGVWVI+HECGHHAFSDYQL+DD+VGLFFH       
Sbjct: 66  PLIPHPASYIAWPLYWVFQGCILTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPY 125

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 126 FSWKYSHRRHHSNTGSLERDEVFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYL 185

Query: 206 ------------------------------------------------------------ 210
                                                                       
Sbjct: 186 AFNVSGRPYDRFACHYDPHGPIFTKREWVQVYISDTGILGMCFVVYRIGVAKGALWVMRI 245

[Close]
BLAST of Sed0007042 vs. NCBI nr
Match: VAI48716.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-59
Identity = 131/284 (46.13%), Postives = 149/284 (52.46%), Query Frame = 0 

Query: 15  KSSLQQQLTWERQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS--------- 74
           K   +Q+       G   +R+P  KPPFTL QIKKAIPPHCF RS+++SFS         
Sbjct: 39  KEREKQEQLGRANGGAAYQRSPTDKPPFTLGQIKKAIPPHCFQRSIIKSFSYVVHDLVIV 98

Query: 75  --------------PSASSHGP-----------STGVWVISHECGHHAFSDYQLLDDLVG 134
                         PS    G             TGVWVI+HECGHHAFSDY LLDD VG
Sbjct: 99  AALLYAALVWIPTLPSVLQLGAWPLYWVVQGCVMTGVWVIAHECGHHAFSDYSLLDDTVG 158

Query: 135 LFFH---------------------------------------------------LQHTH 194
           L  H                                                     HTH
Sbjct: 159 LVLHSWLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKEALAWYTPYIYNNPVGRLHTH 218

Query: 195 PALPHYECSEWDWLRGALATMDRDYG--------CTDTHVVHHLFSTMPHYHAKEATEAV 206
           PALPHY+ +EWDWLRGALATMDRDYG         TDTHV HHLFSTMPHYHA EAT+A+
Sbjct: 219 PALPHYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSTMPHYHAMEATKAI 278

[Close]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match: Q84UB9 (Delta(12)-oleate desaturase OS=Trichosanthes kirilowii OX=3677 GN=FAD2 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-65
Identity = 153/369 (41.46%), Postives = 163/369 (44.17%), Query Frame = 0 

Query: 27  QKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS---------------- 86
           +KG VQER PHAKPPFTLSQIKK +PPHCFHRS+LRSFS   S                 
Sbjct: 2   EKG-VQERVPHAKPPFTLSQIKKVVPPHCFHRSLLRSFSYLLSDLAFVSLFFYLAIAYFP 61

Query: 87  -----------------HGPS-TGVWVISHECGHHAFSDYQLLDDLVGLFFH-------- 146
                             G S TGVWVI+HECGHHAFSDYQL+DD+VGLFFH        
Sbjct: 62  LLPHPFPYIAWPLYWIFQGCSLTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPYF 121

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 122 SWKYSHRRHHSNTGSLERDEVFVPKPKSQIPWYLKYFNNPPGRLISLIGTLTLGWPLYLA 181

Query: 207 ------------------------------------------------------------ 210
                                                                       
Sbjct: 182 FNMSGRPYDRFACHYDPYSPIFTKREWIQVYISDAGILGMAFMLYRIGVEKGSFWVMRIY 241

[Close]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match: Q8GZC3 (Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-55
Identity = 134/363 (36.91%), Postives = 153/363 (42.15%), Query Frame = 0 

Query: 31  VQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS-----------------------PS 90
           V +R PH+KPPFTL Q+KKAIPPHCF RSVLRSFS                       P 
Sbjct: 20  VLKRVPHSKPPFTLGQLKKAIPPHCFQRSVLRSFSYVVYDLTVAFIFYYIATNYFHLLPQ 79

Query: 91  ASSHGP-----------STGVWVISHECGHHAFSDYQLLDDLVGLFFH------------ 150
             S+              TGVWVI+HECGHHAFSDYQLLDD+VGL  H            
Sbjct: 80  PLSYVAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSCLLVPYFSWKH 139

Query: 151 ------------------------------------------------------------ 208
                                                                       
Sbjct: 140 SHRRHHSNTASLERDEVFVPKKKSSIRWFSKYLNNPPGRLFTLTITLTLGWPLYLAFNVS 199

[Close]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match: P48630 (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max OX=3847 GN=FAD2-1 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51
Identity = 127/358 (35.47%), Postives = 146/358 (40.78%), Query Frame = 0 

Query: 34  RAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS------------------------PSAS 93
           R P+ KPPFT+ Q+KKAIPPHCF RS+L SFS                        P + 
Sbjct: 28  RVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIFYIATTYFHLLPQPFSL 87

Query: 94  SHGP---------STGVWVISHECGHHAFSDYQLLDDLVGLFFH---------------- 153
              P          TGVWVI+HECGHHAFS YQ +DD+VGL  H                
Sbjct: 88  IAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRR 147

Query: 154 ------------------------------------------------------------ 207
                                                                       
Sbjct: 148 HHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRPY 207

[Close]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match: Q39287 (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea OX=3707 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.2e-50
Identity = 126/364 (34.62%), Postives = 146/364 (40.11%), Query Frame = 0 

Query: 33  ERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS-------------PSASSHGP------ 92
           +R P   PPFT+ ++KKAIPPHCF RS+ RSFS               A+++ P      
Sbjct: 22  KRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPL 81

Query: 93  ---------------STGVWVISHECGHHAFSDYQLLDDLVGLFFH-------------- 152
                           TGVWVI+HECGHHAFSDYQ LDD VGL FH              
Sbjct: 82  SYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSH 141

Query: 153 ------------------------------------------------------------ 210
                                                                       
Sbjct: 142 RRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGR 201

[Close]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match: A3F5L3 (Fatty acid desaturase DES2 OS=Sorghum bicolor OX=4558 GN=DES2 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-49
Identity = 124/362 (34.25%), Postives = 147/362 (40.61%), Query Frame = 0 

Query: 33  ERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS-----------------------PSAS 92
           +R+P  KPPFT+ QIKKAIPPHCF RSVL+SFS                       PS  
Sbjct: 27  QRSPVEKPPFTVGQIKKAIPPHCFQRSVLKSFSYVVRDLVIAAALLYFALAIIPALPSPL 86

Query: 93  SHGP-----------STGVWVISHECGHHAFSDYQLLDDLVGLFFH-------------- 152
            +                +WVI+HECGHHAFSDYQLLDD+VGL  H              
Sbjct: 87  HYAAWPLYWIAQGCVCFAMWVIAHECGHHAFSDYQLLDDIVGLVLHSSLMVPYFSWKYSH 146

Query: 153 ------------------------------------------------------------ 208
                                                                       
Sbjct: 147 RRHHSNTGSLERDEVFVPKTKGALAWYAPYVYNNPVGRLVHIVVQLTLGWPLYLATNVSG 206

[Close]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match: A0A6J1FSC4 (delta(12)-oleate desaturase OS=Cucurbita moschata OX=3662 GN=LOC111448353 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.8e-61
Identity = 148/370 (40.00%), Postives = 160/370 (43.24%), Query Frame = 0 

Query: 26  RQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFSPSASS--------------- 85
           + +  V ER PHAKPPFTLSQIKKAIPPHCFHRS+LRSFS   S                
Sbjct: 6   KMEKAVHERVPHAKPPFTLSQIKKAIPPHCFHRSLLRSFSCLISDLAFVSLFFYLAIAYL 65

Query: 86  ----HGPS---------------TGVWVISHECGHHAFSDYQLLDDLVGLFFH------- 145
               H  S               TGVWVI+HECGHHAFSDYQL+DD+VGLFFH       
Sbjct: 66  PLIPHPASYIAWPLYWVFQGCILTGVWVIAHECGHHAFSDYQLIDDIVGLFFHSALLVPY 125

Query: 146 ------------------------------------------------------------ 205
                                                                       
Sbjct: 126 FSWKYSHRRHHSNTVSLERDEVFVPKPKSQIPWFLKYFNNPPGRLISLLGTLTLGWPLYL 185

Query: 206 ------------------------------------------------------------ 210
                                                                       
Sbjct: 186 AFNVSGRPYDRFACHYDPHGPIFTKREWVQIYISDTGILGMCFVLYRIGVAKGALWVMRI 245

[Close]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match: A0A446VLG0 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Av1G175860 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 5.3e-60
Identity = 131/284 (46.13%), Postives = 149/284 (52.46%), Query Frame = 0 

Query: 15  KSSLQQQLTWERQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS--------- 74
           K   +Q+       G   +R+P  KPPFTL QIKKAIPPHCF RS+++SFS         
Sbjct: 39  KEREKQEQLGRANGGAAYQRSPTDKPPFTLGQIKKAIPPHCFQRSIIKSFSYVVHDLVIV 98

Query: 75  --------------PSASSHGP-----------STGVWVISHECGHHAFSDYQLLDDLVG 134
                         PS    G             TGVWVI+HECGHHAFSDY LLDD VG
Sbjct: 99  AALLYAALVWIPTLPSVLQLGAWPLYWVVQGCVMTGVWVIAHECGHHAFSDYSLLDDTVG 158

Query: 135 LFFH---------------------------------------------------LQHTH 194
           L  H                                                     HTH
Sbjct: 159 LVLHSWLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKEALAWYTPYIYNNPVGRLHTH 218

Query: 195 PALPHYECSEWDWLRGALATMDRDYG--------CTDTHVVHHLFSTMPHYHAKEATEAV 206
           PALPHY+ +EWDWLRGALATMDRDYG         TDTHV HHLFSTMPHYHA EAT+A+
Sbjct: 219 PALPHYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSTMPHYHAMEATKAI 278

[Close]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match: A0A446WJ46 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G164990 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.2e-59
Identity = 130/284 (45.77%), Postives = 149/284 (52.46%), Query Frame = 0 

Query: 15  KSSLQQQLTWERQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS--------- 74
           K   +Q+       G   +R+P  KPPFTL QIKKAIPPHCF RS+++SFS         
Sbjct: 39  KEREKQEQLGRANGGAAYQRSPTDKPPFTLGQIKKAIPPHCFQRSIIKSFSYVVHDLVIV 98

Query: 75  --------------PSASSHGP-----------STGVWVISHECGHHAFSDYQLLDDLVG 134
                         P+    G             TGVWVI+HECGHHAFSDY LLDD VG
Sbjct: 99  AALLYAALVWIPTLPTVLQLGAWPLYWIVQGCVMTGVWVIAHECGHHAFSDYSLLDDTVG 158

Query: 135 LFFH---------------------------------------------------LQHTH 194
           L  H                                                     HTH
Sbjct: 159 LVLHSWLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKEALAWYTPYIYNNPVGRLHTH 218

Query: 195 PALPHYECSEWDWLRGALATMDRDYG--------CTDTHVVHHLFSTMPHYHAKEATEAV 206
           PALPHY+ +EWDWLRGALATMDRDYG         TDTHV HHLFSTMPHYHA EAT+A+
Sbjct: 219 PALPHYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSTMPHYHAMEATKAI 278

[Close]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match: M8AK69 (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Triticum urartu OX=4572 GN=TRIUR3_28479 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.3e-58
Identity = 130/284 (45.77%), Postives = 150/284 (52.82%), Query Frame = 0 

Query: 15  KSSLQQQLTWERQKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS--------- 74
           K   +Q+       G   +R+P  KPPFTL QIKKAIPPHCF RS+++SFS         
Sbjct: 39  KEREKQEQLGRANGGAAYQRSPTDKPPFTLGQIKKAIPPHCFQRSIIKSFSYVVHDLVIV 98

Query: 75  --------------PSASSHGP-----------STGVWVISHECGHHAFSDYQLLDDLVG 134
                         PS    G             TGVWVI+HECGHHAFSDY LLDD VG
Sbjct: 99  AALLYAALVWIPTLPSVLQLGAWPLYWVVQGCVMTGVWVIAHECGHHAFSDYSLLDDTVG 158

Query: 135 L--------------FFHLQH-------------------------------------TH 194
           L              + H +H                                      H
Sbjct: 159 LVLHSWLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKEALAWYTPYIYNNPVGRLPPH 218

Query: 195 PALPHYECSEWDWLRGALATMDRDYG--------CTDTHVVHHLFSTMPHYHAKEATEAV 206
           PALPHY+ +EWDWLRGALATMDRDYG         TDTHV HHLFSTMPHYHA EAT+A+
Sbjct: 219 PALPHYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSTMPHYHAMEATKAI 278

[Close]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match: A0A6J1H0J3 (delta(12)-oleate desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111459302 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.5e-58
Identity = 144/369 (39.02%), Postives = 159/369 (43.09%), Query Frame = 0 

Query: 27  QKGVVQERAPHAKPPFTLSQIKKAIPPHCFHRSVLRS-------------FSPSASSH-- 86
           +KG V ER PHAKPPFTL+QIKKAIPPHCFHRS+LRS             FS  A +H  
Sbjct: 3   EKG-VHERVPHAKPPFTLTQIKKAIPPHCFHRSLLRSFTCLLSDLASVSLFSYLAIAHFR 62

Query: 87  -------------------GPSTGVWVISHECGHHAFSDYQLLDDLVGLFFH-------- 146
                                 TG+WVI+HECGHHAFSDYQL+DD+VG F H        
Sbjct: 63  LIPYPFPYIAWPLYWVFQGCTLTGIWVIAHECGHHAFSDYQLIDDIVGFFLHSALLVPYF 122

Query: 147 ------------------------------------------------------------ 206
                                                                       
Sbjct: 123 SWKYSHRRHHSNTGSLERDEVFVPKPKSQIPWYSKYFNNPPGRLISLIATLTLGWPLYLA 182

Query: 207 ------------------------------------------------------------ 210
                                                                       
Sbjct: 183 FNVSGRPYDRWACHYDPYAPIFTKREWIQVYISDAGILGMAFVLYRIAMAKGAFWVMRIY 242

[Close]
BLAST of Sed0007042 vs. TAIR 10
Match: AT3G12120.1 (fatty acid desaturase 2 )

HSP 1 Score: 191.0 bits (484), Expect = 9.3e-49
Identity = 122/363 (33.61%), Postives = 145/363 (39.94%), Query Frame = 0 

Query: 33  ERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS-----------------------PSAS 92
           +R P  KPPF++  +KKAIPPHCF RS+ RSFS                       P   
Sbjct: 22  KRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPL 81

Query: 93  SH-----------GPSTGVWVISHECGHHAFSDYQLLDDLVGLFFH-------------- 152
           S+              TG+WVI+HECGHHAFSDYQ LDD VGL FH              
Sbjct: 82  SYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSH 141

Query: 153 ------------------------------------------------------------ 210
                                                                       
Sbjct: 142 RRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGR 201

[Close]
BLAST of Sed0007042 vs. TAIR 10
Match: AT3G12120.2 (fatty acid desaturase 2 )

HSP 1 Score: 191.0 bits (484), Expect = 9.3e-49
Identity = 122/363 (33.61%), Postives = 145/363 (39.94%), Query Frame = 0 

Query: 33  ERAPHAKPPFTLSQIKKAIPPHCFHRSVLRSFS-----------------------PSAS 92
           +R P  KPPF++  +KKAIPPHCF RS+ RSFS                       P   
Sbjct: 22  KRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPL 81

Query: 93  SH-----------GPSTGVWVISHECGHHAFSDYQLLDDLVGLFFH-------------- 152
           S+              TG+WVI+HECGHHAFSDYQ LDD VGL FH              
Sbjct: 82  SYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSH 141

Query: 153 ------------------------------------------------------------ 210
                                                                       
Sbjct: 142 RRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGR 201

[Close]
BLAST of Sed0007042 vs. TAIR 10
Match: AT3G11170.1 (fatty acid desaturase 7 )

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17
Identity = 42/81 (51.85%), Postives = 49/81 (60.49%), Query Frame = 0 

Query: 97  DLVGLFFHLQHTHPALPHYECSEWDWLRGALATMDRDYGCTD-------THVVHHLFSTM 156
           D V    H  H    LP Y   EW +LRG L T+DRDYG  +       THV+HHLF  +
Sbjct: 317 DFVTYLHHHGH-EDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQI 376

Query: 157 PHYHAKEATEAVKPLLGEYYR 171
           PHYH  EATEA KP+LG+YYR
Sbjct: 377 PHYHLVEATEAAKPVLGKYYR 396

[Close]
BLAST of Sed0007042 vs. TAIR 10
Match: AT5G05580.1 (fatty acid desaturase 8 )

HSP 1 Score: 85.5 bits (210), Expect = 5.5e-17
Identity = 42/81 (51.85%), Postives = 49/81 (60.49%), Query Frame = 0 

Query: 97  DLVGLFFHLQHTHPALPHYECSEWDWLRGALATMDRDYGCTD-------THVVHHLFSTM 156
           D V    H  H    LP Y   EW +LRG L T+DRDYG  +       THV+HHLF  +
Sbjct: 310 DFVTYLHHHGH-EDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQI 369

Query: 157 PHYHAKEATEAVKPLLGEYYR 171
           PHYH  EATEA KP+LG+YYR
Sbjct: 370 PHYHLVEATEAAKPVLGKYYR 389

[Close]
BLAST of Sed0007042 vs. TAIR 10
Match: AT2G29980.1 (fatty acid desaturase 3 )

HSP 1 Score: 79.7 bits (195), Expect = 3.0e-15
Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 97  DLVGLFFHLQHTHPALPHYECSEWDWLRGALATMDRDYGCTD-------THVVHHLFSTM 156
           D V    H  H    LP Y   EW +LRG L T+DRDYG  +       THV+HHLF  +
Sbjct: 255 DAVTYLHHHGHDE-KLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQI 314

Query: 157 PHYHAKEATEAVKPLLGEYYRFDRT 175
           PHYH  +AT+A K +LG YYR  +T
Sbjct: 315 PHYHLVDATKAAKHVLGRYYREPKT 338


HSP 2 Score: 37.7 bits (86), Expect = 1.3e-02
Identity = 16/30 (53.33%), Postives = 21/30 (70.00%), Query Frame = 0 

Query: 36 PHAKPPFTLSQIKKAIPPHCFHRSVLRSFS 66
          P A+PPF +  I+ AIP HC+ +S LRS S
Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMS 57

The following BLAST results are available for this feature:
BLAST of Sed0007042 vs. NCBI nr
Match NameE-valueIdentityDescription
Q84UB9.13.1e-6241.46RecName: Full=Delta(12)-oleate desaturase; Short=PgFAD2 [Trichosanthes kirilowii... [more]
XP_022943671.11.0e-6040.00delta(12)-oleate desaturase [Cucurbita moschata][more]
XP_023512996.11.7e-6040.00delta(12)-oleate desaturase [Cucurbita pepo subsp. pepo] >XP_023522472.1 delta(1... [more]
KAG6570369.11.7e-6040.00Delta(12)-oleate desaturase, partial [Cucurbita argyrosperma subsp. sororia][more]
VAI48716.11.1e-5946.13unnamed protein product [Triticum turgidum subsp. durum][more]
BLAST of Sed0007042 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84UB94.1e-6541.46Delta(12)-oleate desaturase OS=Trichosanthes kirilowii OX=3677 GN=FAD2 PE=2 SV=1[more]
Q8GZC31.0e-5536.91Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV... [more]
P486303.3e-5135.47Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max OX... [more]
Q392878.2e-5034.62Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea OX=3707 ... [more]
A3F5L31.1e-4934.25Fatty acid desaturase DES2 OS=Sorghum bicolor OX=4558 GN=DES2 PE=2 SV=1[more]
BLAST of Sed0007042 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FSC44.8e-6140.00delta(12)-oleate desaturase OS=Cucurbita moschata OX=3662 GN=LOC111448353 PE=3 S... [more]
A0A446VLG05.3e-6046.13Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Av1G... [more]
A0A446WJ461.2e-5945.77Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G... [more]
M8AK691.3e-5845.77Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Triticum urartu OX=4572 ... [more]
A0A6J1H0J38.5e-5839.02delta(12)-oleate desaturase-like OS=Cucurbita moschata OX=3662 GN=LOC111459302 P... [more]
BLAST of Sed0007042 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12120.19.3e-4933.61fatty acid desaturase 2 [more]
AT3G12120.29.3e-4933.61fatty acid desaturase 2 [more]
AT3G11170.14.2e-1751.85fatty acid desaturase 7 [more]
AT5G05580.15.5e-1751.85fatty acid desaturase 8 [more]
AT2G29980.13.0e-1547.06fatty acid desaturase 3 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32100OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTICcoord: 104..208
NoneNo IPR availablePANTHERPTHR32100:SF40OLEATE HYDROXYLASE FAH12coord: 104..208
NoneNo IPR availablePANTHERPTHR32100:SF40OLEATE HYDROXYLASE FAH12coord: 31..65
coord: 75..104
NoneNo IPR availablePANTHERPTHR32100OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTICcoord: 31..65
coord: 75..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0007042.1Sed0007042.1mRNA