Sed0007035 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGCCATCAAACCAAGAATCTCCACCGTACGATAATTCATCAATCAGTGATGTTCTGTATGTACTCAATTCCCGCGTTTCATGTGAATATTTCCCATCGCAGTTGCAGCAGCATCGATTCCAAAACCCCCACTCGCGTCATTTCCCACGCGCATTCACGCGCCGACAACCCAAATAAAAACTCTGTTTCTTTTCTCACTCCAATCCTTTCGCTCACTCTGTTTATTTTTCTCTCCGATGAAGAAGCTCTACCGGCGAAGGGGAACGGTCCACCCGTCGCCGCCGGCAATCTCCGACCACCTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCACGGCGGCACTATCGCCGGCGGACCGCCAGGTATTGGCCTACCTGATTTCCTCCGCCGTCAACAACCACTCCGGCCGCCGCGTTTCCGATCACCCTCCGGTAAACTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGATCCGATGGGACTCGTCTCCGAATCGGCAACTCATCCACGAAATCATCGAAGCTTATGAAGAAAAACTGGCTCAAACCCTAACCGGCAAAAACAAAAAAGAAAGGAAGAAGAGGAGTACCGGGTCGGGTCAGTGTACGGGGCCCGAACCGAGCTCGAATGAAGAAGAATCGAGGCTGGCGACGGAAATGGAGGCGGTGGGAGACGGCGGCGATGGCGGTGGCGGTGAGGAAGAGGCGGAGAAAGGATCAGTGAGGAAGTTTTTGAGTTTCATAGGGGAAAGAATTTGGGGAAGATGAATTTTGGGGTTTTTTTTTTCTATGATTTACTTCCAGTAATTATTATGGGGAAATATGGGAATTAAAGAAGAAGAAAAAAGTTATCATGAACTAATTAATTAGCTGCCTTTCTTCTTTTGGTTCTTAATTGTAAATAGGAATCTTTAAGTTTTGC CTGCCATCAAACCAAGAATCTCCACCGTACGATAATTCATCAATCAGTGATGTTCTGTATGTACTCAATTCCCGCGTTTCATGTGAATATTTCCCATCGCAGTTGCAGCAGCATCGATTCCAAAACCCCCACTCGCGTCATTTCCCACGCGCATTCACGCGCCGACAACCCAAATAAAAACTCTGTTTCTTTTCTCACTCCAATCCTTTCGCTCACTCTGTTTATTTTTCTCTCCGATGAAGAAGCTCTACCGGCGAAGGGGAACGGTCCACCCGTCGCCGCCGGCAATCTCCGACCACCTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCACGGCGGCACTATCGCCGGCGGACCGCCAGGTATTGGCCTACCTGATTTCCTCCGCCGTCAACAACCACTCCGGCCGCCGCGTTTCCGATCACCCTCCGGTAAACTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGATCCGATGGGACTCGTCTCCGAATCGGCAACTCATCCACGAAATCATCGAAGCTTATGAAGAAAAACTGGCTCAAACCCTAACCGGCAAAAACAAAAAAGAAAGGAAGAAGAGGAGTACCGGGTCGGGTCAGTGTACGGGGCCCGAACCGAGCTCGAATGAAGAAGAATCGAGGCTGGCGACGGAAATGGAGGCGGTGGGAGACGGCGGCGATGGCGGTGGCGGTGAGGAAGAGGCGGAGAAAGGATCAGTGAGGAAGTTTTTGAGTTTCATAGGGGAAAGAATTTGGGGAAGATGAATTTTGGGGTTTTTTTTTTCTATGATTTACTTCCAGTAATTATTATGGGGAAATATGGGAATTAAAGAAGAAGAAAAAAGTTATCATGAACTAATTAATTAGCTGCCTTTCTTCTTTTGGTTCTTAATTGTAAATAGGAATCTTTAAGTTTTGC ATGAAGAAGCTCTACCGGCGAAGGGGAACGGTCCACCCGTCGCCGCCGGCAATCTCCGACCACCTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCACGGCGGCACTATCGCCGGCGGACCGCCAGGTATTGGCCTACCTGATTTCCTCCGCCGTCAACAACCACTCCGGCCGCCGCGTTTCCGATCACCCTCCGGTAAACTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGATCCGATGGGACTCGTCTCCGAATCGGCAACTCATCCACGAAATCATCGAAGCTTATGAAGAAAAACTGGCTCAAACCCTAACCGGCAAAAACAAAAAAGAAAGGAAGAAGAGGAGTACCGGGTCGGGTCAGTGTACGGGGCCCGAACCGAGCTCGAATGAAGAAGAATCGAGGCTGGCGACGGAAATGGAGGCGGTGGGAGACGGCGGCGATGGCGGTGGCGGTGAGGAAGAGGCGGAGAAAGGATCAGTGAGGAAGTTTTTGAGTTTCATAGGGGAAAGAATTTGGGGAAGATGA MKKLYRRRGTVHPSPPAISDHLSFLPAAVLTLTAALSPADRQVLAYLISSAVNNHSGRRVSDHPPVNSCGCFRCYTSYWIRWDSSPNRQLIHEIIEAYEEKLAQTLTGKNKKERKKRSTGSGQCTGPEPSSNEEESRLATEMEAVGDGGDGGGGEEEAEKGSVRKFLSFIGERIWGR Homology
BLAST of Sed0007035 vs. NCBI nr
Match: XP_022994256.1 (uncharacterized protein LOC111490045 [Cucurbita maxima]) HSP 1 Score: 231.9 bits (590), Expect = 4.3e-57 Identity = 130/193 (67.36%), Postives = 142/193 (73.58%), Query Frame = 0
BLAST of Sed0007035 vs. NCBI nr
Match: XP_023520004.1 (uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.1 bits (588), Expect = 7.4e-57 Identity = 133/204 (65.20%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Sed0007035 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothetical protein SDJN03_19695, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224.9 bits (572), Expect = 5.3e-55 Identity = 129/204 (63.24%), Postives = 144/204 (70.59%), Query Frame = 0
BLAST of Sed0007035 vs. NCBI nr
Match: XP_023001610.1 (uncharacterized protein LOC111495687 [Cucurbita maxima]) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 129/204 (63.24%), Postives = 145/204 (71.08%), Query Frame = 0
BLAST of Sed0007035 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida]) HSP 1 Score: 223.0 bits (567), Expect = 2.0e-54 Identity = 128/201 (63.68%), Postives = 143/201 (71.14%), Query Frame = 0
BLAST of Sed0007035 vs. ExPASy TrEMBL
Match: A0A6J1JYL3 (uncharacterized protein LOC111490045 OS=Cucurbita maxima OX=3661 GN=LOC111490045 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57 Identity = 130/193 (67.36%), Postives = 142/193 (73.58%), Query Frame = 0
BLAST of Sed0007035 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55 Identity = 129/204 (63.24%), Postives = 144/204 (70.59%), Query Frame = 0
BLAST of Sed0007035 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 5.7e-55 Identity = 129/204 (63.24%), Postives = 145/204 (71.08%), Query Frame = 0
BLAST of Sed0007035 vs. ExPASy TrEMBL
Match: A0A6J1EBG8 (uncharacterized protein LOC111432628 OS=Cucurbita moschata OX=3662 GN=LOC111432628 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53 Identity = 125/193 (64.77%), Postives = 137/193 (70.98%), Query Frame = 0
BLAST of Sed0007035 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.1e-49 Identity = 108/195 (55.38%), Postives = 130/195 (66.67%), Query Frame = 0
BLAST of Sed0007035 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-35 Identity = 99/226 (43.81%), Postives = 127/226 (56.19%), Query Frame = 0
BLAST of Sed0007035 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34 Identity = 95/193 (49.22%), Postives = 119/193 (61.66%), Query Frame = 0
BLAST of Sed0007035 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 7.7e-20 Identity = 61/153 (39.87%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Sed0007035 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19 Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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