Sed0006973 (gene) Chayote v1

Overview


Name	Sed0006973
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MYB domain protein-like
Location	LG01: 21578964 .. 21579686 (+)
RNA-Seq Expression	Sed0006973
Synteny	Sed0006973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACCAATGATCACAACGGGTCCATGGAGCGGATAAAGGGTCCATGGGGCCCCGACGAGGACGAGCTGTTGCGCCGCCTTGTGCGCAGCCACGGCCCCAAGAATTGGTCTGTTATAGGCAGGTCCATTCCCGGAAGATCCGGCAAGTCCTGCCGCCTGCGGTGGTGCAACCAGCTCTCCCCGGAGGTGGAGCACCGCCCCTTCACTGCCGATGAGGACCACGCCATCATCCAGGCTCACTCCAGATTCGGCAACAAATGGGCCACCATTGCTCGTCTTCTCAACGCCCGCACCGACAACGCCATTAAAAACCACTGGAACTCCACTCTCAAGCGCAAATCCTCCTCCGTTGCTCATTACCCTTTCAAGAGATCCGCCAGCAGCCCATCCGGCTCCGAATTGAGCGATTCGAGCCTGCCCGATTTGTCTTCTCAATCTCCGCTGCATCAGCCGCCCATAGAGACCTCTCTCAGTCTCTGCCTGCCTGGATCCGGATCCGGGTCCGGGTCCTCGGAGGTACCGAAGCGGGCCCCGGAAACCAATCCGAGGATTGAGAAGCAGTTCTTCAGCGACGAGTTCTTGGGTGTGATGCAGGAAATGATAAGAAAAGAAGTGCACAGCTACATGTCTGGAATGGAGCAAAATGGTGTGTGCGTGAAGACGGAGGCGATCAGAAACGCAGTCGCAAAACGGATTGGGATTAGGAAGCTGGATTAG

mRNA sequence

ATGGCTTCCACCAATGATCACAACGGGTCCATGGAGCGGATAAAGGGTCCATGGGGCCCCGACGAGGACGAGCTGTTGCGCCGCCTTGTGCGCAGCCACGGCCCCAAGAATTGGTCTGTTATAGGCAGGTCCATTCCCGGAAGATCCGGCAAGTCCTGCCGCCTGCGGTGGTGCAACCAGCTCTCCCCGGAGGTGGAGCACCGCCCCTTCACTGCCGATGAGGACCACGCCATCATCCAGGCTCACTCCAGATTCGGCAACAAATGGGCCACCATTGCTCGTCTTCTCAACGCCCGCACCGACAACGCCATTAAAAACCACTGGAACTCCACTCTCAAGCGCAAATCCTCCTCCGTTGCTCATTACCCTTTCAAGAGATCCGCCAGCAGCCCATCCGGCTCCGAATTGAGCGATTCGAGCCTGCCCGATTTGTCTTCTCAATCTCCGCTGCATCAGCCGCCCATAGAGACCTCTCTCAGTCTCTGCCTGCCTGGATCCGGATCCGGGTCCGGGTCCTCGGAGGTACCGAAGCGGGCCCCGGAAACCAATCCGAGGATTGAGAAGCAGTTCTTCAGCGACGAGTTCTTGGGTGTGATGCAGGAAATGATAAGAAAAGAAGTGCACAGCTACATGTCTGGAATGGAGCAAAATGGTGTGTGCGTGAAGACGGAGGCGATCAGAAACGCAGTCGCAAAACGGATTGGGATTAGGAAGCTGGATTAG

Coding sequence (CDS)

ATGGCTTCCACCAATGATCACAACGGGTCCATGGAGCGGATAAAGGGTCCATGGGGCCCCGACGAGGACGAGCTGTTGCGCCGCCTTGTGCGCAGCCACGGCCCCAAGAATTGGTCTGTTATAGGCAGGTCCATTCCCGGAAGATCCGGCAAGTCCTGCCGCCTGCGGTGGTGCAACCAGCTCTCCCCGGAGGTGGAGCACCGCCCCTTCACTGCCGATGAGGACCACGCCATCATCCAGGCTCACTCCAGATTCGGCAACAAATGGGCCACCATTGCTCGTCTTCTCAACGCCCGCACCGACAACGCCATTAAAAACCACTGGAACTCCACTCTCAAGCGCAAATCCTCCTCCGTTGCTCATTACCCTTTCAAGAGATCCGCCAGCAGCCCATCCGGCTCCGAATTGAGCGATTCGAGCCTGCCCGATTTGTCTTCTCAATCTCCGCTGCATCAGCCGCCCATAGAGACCTCTCTCAGTCTCTGCCTGCCTGGATCCGGATCCGGGTCCGGGTCCTCGGAGGTACCGAAGCGGGCCCCGGAAACCAATCCGAGGATTGAGAAGCAGTTCTTCAGCGACGAGTTCTTGGGTGTGATGCAGGAAATGATAAGAAAAGAAGTGCACAGCTACATGTCTGGAATGGAGCAAAATGGTGTGTGCGTGAAGACGGAGGCGATCAGAAACGCAGTCGCAAAACGGATTGGGATTAGGAAGCTGGATTAG

Protein sequence

MASTNDHNGSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVAHYPFKRSASSPSGSELSDSSLPDLSSQSPLHQPPIETSLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSDEFLGVMQEMIRKEVHSYMSGMEQNGVCVKTEAIRNAVAKRIGIRKLD

Homology

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BLAST of Sed0006973 vs. NCBI nr
Match: XP_004141275.1 (transcription factor MYB44 [Cucumis sativus] >KGN55237.1 hypothetical protein Csa_012129 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-84
Identity = 178/263 (67.68%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW PDEDELLRRLV ++GP+NWS+I +SIPGRSGKSCRLRWCNQLSPEVEHRPFT
Sbjct: 6   DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 65

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA---HYPFKRSA 131
           +DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRKSSS A    +P KRS 
Sbjct: 66  SDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPLKRST 125

Query: 132 -----------SSPSGSELSDSSLPDLSSQ-------------SPLHQPPIE-------T 191
                      SSPSGS+LSDSSL  +SS              S  + PP++       T
Sbjct: 126 SASAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKPFPPVPPLISHSNHPPMDTTSIDPPT 185

Query: 192 SLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSDEFLGVMQEMIRKEVHSYMSGMEQN 241
           SL+L LPGS SG    + PK   E N RIEKQFFS EFLGVMQEMIRKEV SYMSGMEQN
Sbjct: 186 SLTLSLPGSDSG----DAPKHMSEAN-RIEKQFFSAEFLGVMQEMIRKEVQSYMSGMEQN 245

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BLAST of Sed0006973 vs. NCBI nr
Match: XP_038897438.1 (transcription factor MYB44-like [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.4e-82
Identity = 180/279 (64.52%), Postives = 202/279 (72.40%), Query Frame = 0


Query: 3   STNDHNGSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLS 62
           +T  +   ++RIKGPW PDEDELLRRLV ++GP+NWS+I +SIPGRSGKSCRLRWCNQLS
Sbjct: 2   ATTSNTILVDRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLS 61

Query: 63  PEVEHRPFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVAH 122
           PEVEHRPFT+DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRK SSS+A 
Sbjct: 62  PEVEHRPFTSDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSSIAE 121

Query: 123 --YPFKRSA----------SSPSGSELSDSSLPDLSSQ------------SPLHQPPIE- 182
             +P KRSA          SSPSGS+LSDSSL  +SS             S   QPP++ 
Sbjct: 122 HDHPLKRSASVGAPLYFSPSSPSGSDLSDSSLSGMSSSQLCKAFPSASLISQSDQPPMDT 181

Query: 183 -----TSLSLCLPGSGSGSGSSEVPKRAPETNPR----------IEKQFFSDEFLGVMQE 241
                TSL+L LPGS +G    EVPK   E              IEKQFFS EFLGVMQE
Sbjct: 182 SIDPPTSLTLSLPGSDAG----EVPKLVSEPKQAVVVQSGNKMGIEKQFFSAEFLGVMQE 241

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BLAST of Sed0006973 vs. NCBI nr
Match: XP_008452606.1 (PREDICTED: transcription factor MYB44-like [Cucumis melo] >KAA0064419.1 transcription factor MYB44-like [Cucumis melo var. makuwa] >TYK20168.1 transcription factor MYB44-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 9.0e-82
Identity = 178/267 (66.67%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW PDEDELLRRLV ++GP+NWS+I +SI GRSGKSCRLRWCNQLSPEVEHRPFT
Sbjct: 5   DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEHRPFT 64

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA---HYPFKRSA 131
            DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRKSSS A    +P KRSA
Sbjct: 65  PDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPLKRSA 124

Query: 132 -----------SSPSGSELSDSSLPDLSSQ------------SPLHQPPIE-------TS 191
                      SSPSGS+LSDSSL  +SS             S  +Q P+E       TS
Sbjct: 125 SVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSIDPPTS 184

Query: 192 LSLCLPGSGSGSGSSEVPKRAPETNPR------IEKQFFSDEFLGVMQEMIRKEVHSYMS 240
           L+L LPGS SG    E PK   E N +      IEKQFFS EFLGVMQEMIRKEV SYMS
Sbjct: 185 LTLSLPGSDSG----EAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 244

[Close]

BLAST of Sed0006973 vs. NCBI nr
Match: KAG6608445.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301.2 bits (770), Expect = 7.9e-78
Identity = 174/283 (61.48%), Postives = 195/283 (68.90%), Query Frame = 0


Query: 10  SMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRP 69
           +++RIKGPW P+EDELLRRLV S+G +NWS+I +SIPGRSGKSCRLRWCNQLSPEVEH P
Sbjct: 9   AVDRIKGPWSPEEDELLRRLVHSYGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHHP 68

Query: 70  FTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA----HYPF 129
           FT  ED  IIQAHSRFGNKWA IARLLN RTDNAIKNHWNSTLKRK SSS+A    H+P 
Sbjct: 69  FTPYEDDTIIQAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKCSSSIADDFKHHPP 128

Query: 130 KRSA-----------------SSPSGSELSDSSLPDLSSQ------------SPLHQPPI 189
           KRSA                 SSPS S+LSDSSLP +SS             S   QPP+
Sbjct: 129 KRSASVGAAPTTVASPFYFNHSSPSDSDLSDSSLPGMSSSQVCKSFSPDALISQSDQPPM 188

Query: 190 E------TSLSLCLPGSGSGSGSSEVPKRAPETNP------------RIEKQFFSDEFLG 241
           E      TSL+LC P    GS SSEVPK A E +             RIE +FFS EFL 
Sbjct: 189 ETSTDPLTSLTLCPP----GSDSSEVPKLASEPDQAPQQPVQSADKLRIESKFFSSEFLA 248

[Close]

BLAST of Sed0006973 vs. NCBI nr
Match: XP_022940006.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 174/283 (61.48%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 10  SMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRP 69
           +++RIKGPW P+EDELLRRLV ++G +NWS+I +SIPGRSGKSCRLRWCNQLSPEVEH P
Sbjct: 9   AVDRIKGPWSPEEDELLRRLVHTYGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHHP 68

Query: 70  FTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA----HYPF 129
           FT  ED  IIQAHSRFGNKWA IARLLN RTDNAIKNHWNSTLKRK SSS+A    H+P 
Sbjct: 69  FTPYEDDTIIQAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKCSSSIADDFKHHPP 128

Query: 130 KRSA-----------------SSPSGSELSDSSLPDLSSQ------------SPLHQPPI 189
           KRSA                 SSPS S+LSDSSLP +SS             S   QPP+
Sbjct: 129 KRSASVGAAPTTVASPFYFNHSSPSDSDLSDSSLPGMSSSQVCKSFSPDALISQSDQPPM 188

Query: 190 E------TSLSLCLPGSGSGSGSSEVPKRAPETNP------------RIEKQFFSDEFLG 241
           E      TSL+LC P    GS SSEVPK A E +             RIE +FFS EFL 
Sbjct: 189 ETSTDPLTSLTLCPP----GSDSSEVPKLASEPDQAPQQPVQSSDKLRIESKFFSSEFLA 248

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BLAST of Sed0006973 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.3e-54
Identity = 128/277 (46.21%), Postives = 159/277 (57.40%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW P+EDE LRRLV  +GP+NW+VI +SIPGRSGKSCRLRWCNQLSP+VEHRPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK---------SSSVAHY 131
           A+ED  I +AH++FGNKWATIARLLN RTDNA+KNHWNSTLKRK           S  H 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 132 PFKRSAS---------------SPSGSELSDSS----LPDLSSQSPLHQP-------PIE 191
           P KRS S               SP+GS++SDSS    LP +    P+ +P       PIE
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPIE 182

Query: 192 ---------TSLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSD-------------- 218
                    TSLSL LPG+     S+   +     N    +   ++              
Sbjct: 183 TSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGA 242

[Close]

BLAST of Sed0006973 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.0e-53
Identity = 127/282 (45.04%), Postives = 162/282 (57.45%), Query Frame = 0


Query: 4   TNDHNGSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSP 63
           +N    +MERIKGPW P+ED+LL+RLV+ HGP+NWS+I +SIPGRSGKSCRLRWCNQLSP
Sbjct: 2   SNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 64  EVEHRPFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA--- 123
           EVEHR F+ +ED  II+AH+RFGNKWATI+RLLN RTDNAIKNHWNSTLKRK S      
Sbjct: 62  EVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSC 121

Query: 124 --------------HYPFKRSAS--------------SPSGSELSDSS-----------L 183
                           P KR+AS              SPSGS++S+ S            
Sbjct: 122 DFGGNGGYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVR 181

Query: 184 PDLSSQSPLHQPPIETSLSLCLPGSG-----------------SGSGSSEVPKRAPETNP 220
            ++++ S    PP  T LSL LP +                   G  ++E+     E   
Sbjct: 182 SEVTASSSGEDPP--TYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQV 241

[Close]

BLAST of Sed0006973 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-49
Identity = 127/270 (47.04%), Postives = 156/270 (57.78%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +R+KGPW  +EDE LRR+V  +GP+NWS I +SIPGRSGKSCRLRWCNQLSPEVEHRPF+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA---------- 131
            +ED  I+ A ++FGNKWATIARLLN RTDNA+KNHWNSTLKRK S  VA          
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEED 122

Query: 132 -HYPFKR------------------SASSPSGSELSDSS-LPDLSSQ-SPLHQP------ 191
              P KR                  S  SP+G ++SDSS +P  SS  + L +P      
Sbjct: 123 QDRPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSPSSPVAQLFKPMPISGG 182

Query: 192 --------PIE---------TSLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSD--- 217
                   P+E         TSLSL LPG+ + S S      A    PR E Q   +   
Sbjct: 183 FTVVPQPLPVEMSSSSEDPPTSLSLSLPGAENTSSSHNNNNNA-LMFPRFESQMKINVEE 242

[Close]

BLAST of Sed0006973 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-36
Identity = 75/156 (48.08%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 1   MASTNDHNGSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQ 60
           +A ++ + G   ++KGPW P++DE L RLV+  GP+NW++I R IPGRSGKSCRLRWCNQ
Sbjct: 36  LAKSDANGGGKSKVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSCRLRWCNQ 95

Query: 61  LSPEVEHRPFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA 120
           L P ++ +PF+ +E+H I+ A +  GNKW+ IA+LL  RTDNAIKNHWNS L+RK +   
Sbjct: 96  LDPILKRKPFSDEEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLRRKPAEQW 155

Query: 121 HYPFKRSASSPSGSELSDSSLPDLSSQSPLHQPPIE 157
             P   S ++    +L  S +  +S+ SP    P E
Sbjct: 156 KIPLLMS-NTEIVYQLYPSMVRRISNASPKEHLPQE 190

[Close]

BLAST of Sed0006973 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.9e-35
Identity = 73/132 (55.30%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 9   GSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHR 68
           G  +R+KGPW  +ED++L  LV+  G +NWS I RSIPGRSGKSCRLRWCNQL+P +   
Sbjct: 49  GRRDRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRN 108

Query: 69  PFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVAHYPFKRSA 128
            FT  ED AII AH+  GNKWA IA+LL  RTDNAIKNHWNS L+R+        F+++ 
Sbjct: 109 SFTEVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRR-----FIDFEKAK 168

Query: 129 SSPSGSELSDSS 141
           +  +GS + D S
Sbjct: 169 NIGTGSLVVDDS 175

[Close]

BLAST of Sed0006973 vs. ExPASy TrEMBL
Match: A0A0A0L3P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641690 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 9.4e-85
Identity = 178/263 (67.68%), Postives = 197/263 (74.90%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW PDEDELLRRLV ++GP+NWS+I +SIPGRSGKSCRLRWCNQLSPEVEHRPFT
Sbjct: 6   DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 65

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA---HYPFKRSA 131
           +DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRKSSS A    +P KRS 
Sbjct: 66  SDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPLKRST 125

Query: 132 -----------SSPSGSELSDSSLPDLSSQ-------------SPLHQPPIE-------T 191
                      SSPSGS+LSDSSL  +SS              S  + PP++       T
Sbjct: 126 SASAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKPFPPVPPLISHSNHPPMDTTSIDPPT 185

Query: 192 SLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSDEFLGVMQEMIRKEVHSYMSGMEQN 241
           SL+L LPGS SG    + PK   E N RIEKQFFS EFLGVMQEMIRKEV SYMSGMEQN
Sbjct: 186 SLTLSLPGSDSG----DAPKHMSEAN-RIEKQFFSAEFLGVMQEMIRKEVQSYMSGMEQN 245

[Close]

BLAST of Sed0006973 vs. ExPASy TrEMBL
Match: A0A5D3D9I8 (Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003000 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.4e-82
Identity = 178/267 (66.67%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW PDEDELLRRLV ++GP+NWS+I +SI GRSGKSCRLRWCNQLSPEVEHRPFT
Sbjct: 5   DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEHRPFT 64

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA---HYPFKRSA 131
            DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRKSSS A    +P KRSA
Sbjct: 65  PDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPLKRSA 124

Query: 132 -----------SSPSGSELSDSSLPDLSSQ------------SPLHQPPIE-------TS 191
                      SSPSGS+LSDSSL  +SS             S  +Q P+E       TS
Sbjct: 125 SVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSIDPPTS 184

Query: 192 LSLCLPGSGSGSGSSEVPKRAPETNPR------IEKQFFSDEFLGVMQEMIRKEVHSYMS 240
           L+L LPGS SG    E PK   E N +      IEKQFFS EFLGVMQEMIRKEV SYMS
Sbjct: 185 LTLSLPGSDSG----EAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 244

[Close]

BLAST of Sed0006973 vs. ExPASy TrEMBL
Match: A0A1S3BTM6 (transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103493578 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.4e-82
Identity = 178/267 (66.67%), Postives = 195/267 (73.03%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW PDEDELLRRLV ++GP+NWS+I +SI GRSGKSCRLRWCNQLSPEVEHRPFT
Sbjct: 5   DRIKGPWSPDEDELLRRLVHNYGPRNWSLISKSISGRSGKSCRLRWCNQLSPEVEHRPFT 64

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA---HYPFKRSA 131
            DED  IIQAHSRFGNKWATIARLLN RTDNAIKNHWNSTLKRKSSS A    +P KRSA
Sbjct: 65  PDEDDTIIQAHSRFGNKWATIARLLNGRTDNAIKNHWNSTLKRKSSSSAPEDDHPLKRSA 124

Query: 132 -----------SSPSGSELSDSSLPDLSSQ------------SPLHQPPIE-------TS 191
                      SSPSGS+LSDSSL  +SS             S  +Q P+E       TS
Sbjct: 125 SVGAPPLYFNPSSPSGSDLSDSSLSGMSSSQVCKTFPPVPLISHSNQHPMETTSIDPPTS 184

Query: 192 LSLCLPGSGSGSGSSEVPKRAPETNPR------IEKQFFSDEFLGVMQEMIRKEVHSYMS 240
           L+L LPGS SG    E PK   E N +      IEKQFFS EFLGVMQEMIRKEV SYMS
Sbjct: 185 LTLSLPGSDSG----EAPKHMSEGNHQSGKKAGIEKQFFSAEFLGVMQEMIRKEVQSYMS 244

[Close]

BLAST of Sed0006973 vs. ExPASy TrEMBL
Match: A0A6J1FHB8 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111445770 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.5e-78
Identity = 174/283 (61.48%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 10  SMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRP 69
           +++RIKGPW P+EDELLRRLV ++G +NWS+I +SIPGRSGKSCRLRWCNQLSPEVEH P
Sbjct: 9   AVDRIKGPWSPEEDELLRRLVHTYGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHHP 68

Query: 70  FTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA----HYPF 129
           FT  ED  IIQAHSRFGNKWA IARLLN RTDNAIKNHWNSTLKRK SSS+A    H+P 
Sbjct: 69  FTPYEDDTIIQAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKCSSSIADDFKHHPP 128

Query: 130 KRSA-----------------SSPSGSELSDSSLPDLSSQ------------SPLHQPPI 189
           KRSA                 SSPS S+LSDSSLP +SS             S   QPP+
Sbjct: 129 KRSASVGAAPTTVASPFYFNHSSPSDSDLSDSSLPGMSSSQVCKSFSPDALISQSDQPPM 188

Query: 190 E------TSLSLCLPGSGSGSGSSEVPKRAPETNP------------RIEKQFFSDEFLG 241
           E      TSL+LC P    GS SSEVPK A E +             RIE +FFS EFL 
Sbjct: 189 ETSTDPLTSLTLCPP----GSDSSEVPKLASEPDQAPQQPVQSSDKLRIESKFFSSEFLA 248

[Close]

BLAST of Sed0006973 vs. ExPASy TrEMBL
Match: A0A6J1IW83 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481155 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 9.4e-77
Identity = 173/282 (61.35%), Postives = 193/282 (68.44%), Query Frame = 0


Query: 11  MERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPF 70
           ++RIKGPW P+EDELLRRLV S+G +NWS+I +SIPGRSGKSCRLRWCNQLSPEVEH PF
Sbjct: 10  VDRIKGPWSPEEDELLRRLVHSYGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHHPF 69

Query: 71  TADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA----HYPFK 130
           T  ED  IIQAHSRFGNKWA IARLLN RTDNAIKNHWNSTLKRK SSS+A    H+P K
Sbjct: 70  TPYEDDTIIQAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKYSSSIADDFKHHPPK 129

Query: 131 RSA-----------------SSPSGSELSDSSLPDLSSQ------------SPLHQPPIE 190
           RSA                 SSPS S+LSDSSL  +SS             S   QPP+E
Sbjct: 130 RSASVGAAPTTVASPFYFNHSSPSDSDLSDSSLLGMSSSQVCKSVSPDALISRSDQPPME 189

Query: 191 ------TSLSLCLPGSGSGSGSSEVPKRAPETNP------------RIEKQFFSDEFLGV 241
                 TSL+LC P    GS SSEVPK A E +             RIE +FFS EFL V
Sbjct: 190 TSTDPLTSLTLCPP----GSDSSEVPKLASEPDQAPQQPVQSADKLRIESKFFSSEFLAV 249

[Close]

BLAST of Sed0006973 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 212.2 bits (539), Expect = 4.5e-55
Identity = 128/277 (46.21%), Postives = 159/277 (57.40%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +RIKGPW P+EDE LRRLV  +GP+NW+VI +SIPGRSGKSCRLRWCNQLSP+VEHRPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK---------SSSVAHY 131
           A+ED  I +AH++FGNKWATIARLLN RTDNA+KNHWNSTLKRK           S  H 
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 132 PFKRSAS---------------SPSGSELSDSS----LPDLSSQSPLHQP-------PIE 191
           P KRS S               SP+GS++SDSS    LP +    P+ +P       PIE
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPIE 182

Query: 192 ---------TSLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSD-------------- 218
                    TSLSL LPG+     S+   +     N    +   ++              
Sbjct: 183 TSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGA 242

[Close]

BLAST of Sed0006973 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 208.8 bits (530), Expect = 5.0e-54
Identity = 127/282 (45.04%), Postives = 162/282 (57.45%), Query Frame = 0


Query: 4   TNDHNGSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSP 63
           +N    +MERIKGPW P+ED+LL+RLV+ HGP+NWS+I +SIPGRSGKSCRLRWCNQLSP
Sbjct: 2   SNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 64  EVEHRPFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSSVA--- 123
           EVEHR F+ +ED  II+AH+RFGNKWATI+RLLN RTDNAIKNHWNSTLKRK S      
Sbjct: 62  EVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSC 121

Query: 124 --------------HYPFKRSAS--------------SPSGSELSDSS-----------L 183
                           P KR+AS              SPSGS++S+ S            
Sbjct: 122 DFGGNGGYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVR 181

Query: 184 PDLSSQSPLHQPPIETSLSLCLPGSG-----------------SGSGSSEVPKRAPETNP 220
            ++++ S    PP  T LSL LP +                   G  ++E+     E   
Sbjct: 182 SEVTASSSGEDPP--TYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQV 241

[Close]

BLAST of Sed0006973 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-51
Identity = 126/266 (47.37%), Postives = 152/266 (57.14%), Query Frame = 0


Query: 11  MERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPF 70
           M+RIKGPW P+ED+LL+ LV+ HGP+NWS+I +SIPGRSGKSCRLRWCNQLSPEVEHR F
Sbjct: 9   MDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGF 68

Query: 71  TADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRKSSS------------ 130
           TA+ED  II AH+RFGNKWATIARLLN RTDNAIKNHWNSTLKRK S             
Sbjct: 69  TAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGGGEEGQSCD 128

Query: 131 -----------VAHYPFKRSAS-----------SPSGSELSDSS------LPDLSSQSPL 190
                          P KR AS           SP+GS++S+ S      LP +SS   +
Sbjct: 129 FGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLP-VSSSCHV 188

Query: 191 HQP-------------PIE------TSLSLCLPGSGSGSGSSEV--PKRAPETNPRIEKQ 216
            +P             P E      T L L LP     +   E+   KR  E     E  
Sbjct: 189 FKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREIS 248

[Close]

BLAST of Sed0006973 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 196.8 bits (499), Expect = 2.0e-50
Identity = 127/270 (47.04%), Postives = 156/270 (57.78%), Query Frame = 0


Query: 12  ERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHRPFT 71
           +R+KGPW  +EDE LRR+V  +GP+NWS I +SIPGRSGKSCRLRWCNQLSPEVEHRPF+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 72  ADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK-SSSVA---------- 131
            +ED  I+ A ++FGNKWATIARLLN RTDNA+KNHWNSTLKRK S  VA          
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEED 122

Query: 132 -HYPFKR------------------SASSPSGSELSDSS-LPDLSSQ-SPLHQP------ 191
              P KR                  S  SP+G ++SDSS +P  SS  + L +P      
Sbjct: 123 QDRPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSPSSPVAQLFKPMPISGG 182

Query: 192 --------PIE---------TSLSLCLPGSGSGSGSSEVPKRAPETNPRIEKQFFSD--- 217
                   P+E         TSLSL LPG+ + S S      A    PR E Q   +   
Sbjct: 183 FTVVPQPLPVEMSSSSEDPPTSLSLSLPGAENTSSSHNNNNNA-LMFPRFESQMKINVEE 242

[Close]

BLAST of Sed0006973 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 158.3 bits (399), Expect = 7.7e-39
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 9   GSMERIKGPWGPDEDELLRRLVRSHGPKNWSVIGRSIPGRSGKSCRLRWCNQLSPEVEHR 68
           G   ++KGPW  +ED +L +LVR  GP+NWS+I R IPGRSGKSCRLRWCNQL P ++ +
Sbjct: 50  GIRSKVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRK 109

Query: 69  PFTADEDHAIIQAHSRFGNKWATIARLLNARTDNAIKNHWNSTLKRK 116
           PF+ +ED  II AH+  GNKWA IA+LL  RTDNAIKNHWNSTL+RK
Sbjct: 110 PFSDEEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

The following BLAST results are available for this feature:

BLAST of Sed0006973 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141275.1	1.9e-84	67.68	transcription factor MYB44 [Cucumis sativus] >KGN55237.1 hypothetical protein Cs...	[more]
XP_038897438.1	1.4e-82	64.52	transcription factor MYB44-like [Benincasa hispida]	[more]
XP_008452606.1	9.0e-82	66.67	PREDICTED: transcription factor MYB44-like [Cucumis melo] >KAA0064419.1 transcri...	[more]
KAG6608445.1	7.9e-78	61.48	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940006.1	1.8e-77	61.48	transcription factor MYB44-like [Cucurbita moschata]	[more]

BLAST of Sed0006973 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDW1	6.3e-54	46.21	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
O23160	7.0e-53	45.04	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9SN12	2.8e-49	47.04	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
O04192	2.0e-36	48.08	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]
Q42575	3.9e-35	55.30	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]

BLAST of Sed0006973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3P9	9.4e-85	67.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641690 PE=4 SV=1	[more]
A0A5D3D9I8	4.4e-82	66.67	Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BTM6	4.4e-82	66.67	transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103493578 PE=4 SV=...	[more]
A0A6J1FHB8	8.5e-78	61.48	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111445770 PE...	[more]
A0A6J1IW83	9.4e-77	61.35	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481155 PE=4...	[more]

BLAST of Sed0006973 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67300.1	4.5e-55	46.21	myb domain protein r1	[more]
AT4G37260.1	5.0e-54	45.04	myb domain protein 73	[more]
AT2G23290.1	1.0e-51	47.37	myb domain protein 70	[more]
AT3G50060.1	2.0e-50	47.04	myb domain protein 77	[more]
AT3G55730.1	7.7e-39	64.49	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 14..63 e-value: 1.7E-15 score: 67.4 coord: 66..114 e-value: 2.4E-11 score: 53.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 10..61 score: 11.300273
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.01263
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..59 e-value: 2.32447E-14 score: 63.3634
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 2.51395E-9 score: 49.8814
None	No IPR available	GENE3D	1.10.10.60		coord: 14..66 e-value: 1.5E-20 score: 74.9
None	No IPR available	GENE3D	1.10.10.60		coord: 69..115 e-value: 6.2E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..186
None	No IPR available	PANTHER	PTHR45614:SF116	TRANSCRIPTION FACTOR MYB44-LIKE	coord: 12..159
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 12..159
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 15..60 e-value: 3.3E-15 score: 56.0 coord: 69..110 e-value: 5.4E-13 score: 48.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 67..116 score: 21.521025
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 10..65 score: 24.703398
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006973.1	Sed0006973.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding