Sed0006883 (gene) Chayote v1

Overview


Name	Sed0006883
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CCG-binding protein 1
Location	LG05: 44730251 .. 44732508 (+)
RNA-Seq Expression	Sed0006883
Synteny	Sed0006883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCATAATCTCTCTCAAATTCTGCTATCAGTTTCAGTTTTGATTTCGTTACGGCCATGGAATCACCGTTTCTCCGTTCCGTTTCATCGCCATTACTTCTCGAATCTACAGATCTTCATCGCTGGAGCGGATTCGCTCACCGTCCGAGACTTTCCTCCGCCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTATATTCCGAAGCTTGAGCCGTTTAGCCGCACGAAGCTTGATCGCGCCATCAAACAACCGCCTCTGATTGAGAAGTCTGAAAACGAGCTTGCAGGTTTGGTTGTTGATTTCAGAGGAATTTGTACTGTTTTGATTTGGAGTTTTTTGTGTTTCTGATGATCGTTCGCGATTTTCTTAGATTATTGTTCCACGATGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAGCTCAAGGATCTTGAAGTGAGTTTCTATGGATTATCGATTGATTTTGCTTTTAGGTTTTTCTGTTTTTTCGTGTTTGATTTCGTTAAATCTGGAGTACTTTTATTTCATGAATTAGACCTTGGATTAAGTGAAAGAAGAAACAAATGAGATTCAATCATGATCTTTATGGATTCAATTTCACCTCACTTTCTCTGCATCCAAACACGACGTTAACTCACCGAAATTAAAGAACTAAACTCCTTATCTGGATTCAATTTCACCCACTGGATTTGGAATTTTTGTTTTTCTGATAATCCTCTGATAACTATTTTATTTTTTGTTTTTGATTTTTGAAATTTAAGTTTATCCTTACTCAATCTTTTCTACGATCTATTCATATTTTTTTAAGAAAGTAAGTGAATGTTAAATAAATTTTAAAAACAATAACGAACATTTGAAAGCTATTTTTTGTTTCTGAATTGTTATTTGATTTTAAAAAATCTAGGTCGGATTATAGATATCTTACTAAGAAAAAACATATGTTAAGTCGTAGACTTAAATTTTAAAAATAAAATGATTATGATGCAGAACTAAATGGTTATCAAACGAAACCTTAAATTATTATTCTGGAAGGACACTATTTTTATAGCTGTTGCAGTGTTTCAAACTCAAAGATCTTGAAGTGAGTTTCTACAGATTATCGATTGATTGTGATTTAAGTTTTTTCTGTTTTTCCGCGTTTGATTTCCTATTTCTCTCAAATCTGGAGCACTTTTTACATAAATTAGACCAGGTTTAATTGGAAAGAAGAAACAAATGAGATTCAATCATGATATTCATAGATGAGCAAAACTTAAGTATTTACTATGCACAAATTTGAGGAGAGGAGATTCAAATCCATGACCTTCCACGAGAACCTATGACCTTTGAACCCATTACCTCTAGACCATGGGAATACACTTATATCACCGAGCACCGAGCTATTACTGTTGTTGCATCTCTCATTAATCAAATCTATCATTTTTAAAAAATGTATTTTAATACTTTTGCATTACTCAGGTAGGAAGTTATTGTCCTCACTATTTGTGAGAATTACGTATAGTTATCAAGTTTTGATAGTCCACACCGAAATCAAGGAACTAATCTCATTCTTTGTGATCAGAAAGAGTCGCCAAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGTGTGAAATCTCTGATCGGATGCTTACACGGCATCGCGGACATACACAAGAGCAAGGGAAGTGAATACGAGGCGACGATGCCATTGAACGGCGTGGAAGGAAGAGGAACGGATTGTCCAGTACCAGATGGATTGCCTAAATCTGCAGAGGAAATTGAGGAAGAAGAGCAATCGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTATTCCCCTGCACCGGATCACGAAACGGATTGAAACAGAATCTGTTCGTGAAATTTTGGTTTTTATTTTGGCAGATTCAACAGCGGAGTTGTTGAATTGCTCTGAAAATATTTGGTGTATACGTAGTTTTGACTTAGTTTTGGTGTGGCCATTATACATAATAGCTTTTGATTATTGTGCAAATTTTGTACTTTTTCAAACTTACAGAAATAGAATATTTTGGATGATTCTATTCTAGTTTGAGCGACTAAAGAGTTGTTTTGTTGTGATGAATTCAATAATATTTGAAACTTAAACAGTAGGAAACTAGTAAGTATTGGTTGGCCAAAAGAGGTTGGTTTTAAAGTTTAATTATAAGTAGACAATTGATTTTTATGACATTATTCTATCTAATAATTTACTAA

mRNA sequence

CTTCTTCATAATCTCTCTCAAATTCTGCTATCAGTTTCAGTTTTGATTTCGTTACGGCCATGGAATCACCGTTTCTCCGTTCCGTTTCATCGCCATTACTTCTCGAATCTACAGATCTTCATCGCTGGAGCGGATTCGCTCACCGTCCGAGACTTTCCTCCGCCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTATATTCCGAAGCTTGAGCCGTTTAGCCGCACGAAGCTTGATCGCGCCATCAAACAACCGCCTCTGATTGAGAAGTCTGAAAACGAGCTTGCAGATTATTGTTCCACGATGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAGCTCAAGGATCTTGAAAAAGAGTCGCCAAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGTGTGAAATCTCTGATCGGATGCTTACACGGCATCGCGGACATACACAAGAGCAAGGGAAGTGAATACGAGGCGACGATGCCATTGAACGGCGTGGAAGGAAGAGGAACGGATTGTCCAGTACCAGATGGATTGCCTAAATCTGCAGAGGAAATTGAGGAAGAAGAGCAATCGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTATTCCCCTGCACCGGATCACGAAACGGATTGAAACAGAATCTGTTCGTGAAATTTTGGTTTTTATTTTGGCAGATTCAACAGCGGAGTTGTTGAATTGCTCTGAAAATATTTGGTGTATACGTAGTTTTGACTTAGTTTTGGTGTGGCCATTATACATAATAGCTTTTGATTATTGTGCAAATTTTGTACTTTTTCAAACTTACAGAAATAGAATATTTTGGATGATTCTATTCTAGTTTGAGCGACTAAAGAGTTGTTTTGTTGTGATGAATTCAATAATATTTGAAACTTAAACAGTAGGAAACTAGTAAGTATTGGTTGGCCAAAAGAGGTTGGTTTTAAAGTTTAATTATAAGTAGACAATTGATTTTTATGACATTATTCTATCTAATAATTTACTAA

Coding sequence (CDS)

ATGGAATCACCGTTTCTCCGTTCCGTTTCATCGCCATTACTTCTCGAATCTACAGATCTTCATCGCTGGAGCGGATTCGCTCACCGTCCGAGACTTTCCTCCGCCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTATATTCCGAAGCTTGAGCCGTTTAGCCGCACGAAGCTTGATCGCGCCATCAAACAACCGCCTCTGATTGAGAAGTCTGAAAACGAGCTTGCAGATTATTGTTCCACGATGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAGCTCAAGGATCTTGAAAAAGAGTCGCCAAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGTGTGAAATCTCTGATCGGATGCTTACACGGCATCGCGGACATACACAAGAGCAAGGGAAGTGAATACGAGGCGACGATGCCATTGAACGGCGTGGAAGGAAGAGGAACGGATTGTCCAGTACCAGATGGATTGCCTAAATCTGCAGAGGAAATTGAGGAAGAAGAGCAATCGAGAATGCCAGATTCGCCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTATTCCCCTGCACCGGATCACGAAACGGATTGA

Protein sequence

MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDSPFTRLLRSKGTFPAWYSPAPDHETD

Homology

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BLAST of Sed0006883 vs. NCBI nr
Match: XP_038877912.1 (CCG-binding protein 1 [Benincasa hispida])

HSP 1 Score: 350.9 bits (899), Expect = 7.4e-93
Identity = 172/206 (83.50%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLH-RWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLD 60
           MES  LRSVSSPLLL++TDLH R  G +  PR SS VVRCSS++HAYIPKLEPFSRTKLD
Sbjct: 1   MESSVLRSVSSPLLLDNTDLHLRRIGLSSSPRFSSTVVRCSSKNHAYIPKLEPFSRTKLD 60

Query: 61  RAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120
           RAIK+PPLIEKSENELADYCST+EGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV
Sbjct: 61  RAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120

Query: 121 KSLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPD 180
           KSLIGCLHGI  I K KG E E   P  GVEGRG +CP+PDGLPKSAEEIEEEE+ RMPD
Sbjct: 121 KSLIGCLHGITAIQKRKGKEKETRKPWKGVEGRGRECPIPDGLPKSAEEIEEEEEGRMPD 180

Query: 181 SPFTRLLRSKGTFPAWYSPAPDHETD 206
           SPFTRLLRSKG FPAWYSPAPDHETD
Sbjct: 181 SPFTRLLRSKGAFPAWYSPAPDHETD 206

[Close]

BLAST of Sed0006883 vs. NCBI nr
Match: XP_022986608.1 (CCG-binding protein 1 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 9.7e-93
Identity = 175/205 (85.37%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES FLRSVSSPLLLESTDL R  G A  PR  S VVRCSSRSHA IPKL+PFSRTKLDR
Sbjct: 1   MESSFLRSVSSPLLLESTDLLRRIGSASSPRFPSTVVRCSSRSHASIPKLKPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK PPL+EKSENELADYCST++GDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIG LHGIA IHK K SE EA  PLNGVE R  DCP+PDGLPKSAEEIEEEE +RMPDS
Sbjct: 121 SLIGLLHGIAGIHKKKESENEAKKPLNGVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Sed0006883 vs. NCBI nr
Match: XP_023512041.1 (CCG-binding protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.8 bits (891), Expect = 6.3e-92
Identity = 174/205 (84.88%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES  LRSVSSPLLLESTDL R  G    PR  S VVRCSSRSHA IPKLEPFSRTKLDR
Sbjct: 1   MESSLLRSVSSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK PPL+EKSENELADYCST++GDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIG LHGIA IHK K SE EA  PLNGVE R  DCP+PDGLPKSAEEIEEEE +RMPDS
Sbjct: 121 SLIGLLHGIAGIHKRKESENEAKKPLNGVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Sed0006883 vs. NCBI nr
Match: XP_022148538.1 (CCG-binding protein 1 [Momordica charantia])

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 172/205 (83.90%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES  LRS+SSP LLE+TDL R +G A     SS+ VRCSSRSHAYIPKLEPFSRTKLDR
Sbjct: 1   MESFILRSISSPFLLEATDLRR-TGSA-----SSSAVRCSSRSHAYIPKLEPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK+PPLIEKSE+ELADYCST+EGDDSYSCWKAYFELKDLEK+SPKQEVEKLILQAGGVK
Sbjct: 61  AIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEKDSPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIGCLHGIA IHK KGSE  A  PLNG EGR T CP+PDGLPKSAEE+EEEE++RMPDS
Sbjct: 121 SLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEEERARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYSPAPDHETD 199

[Close]

BLAST of Sed0006883 vs. NCBI nr
Match: XP_022943281.1 (CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010960.1 CCG-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 172/205 (83.90%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES  LRS SSPLLLESTDL R  G    PR  S VVRCSSRSHA IPKLEPFSRTKLDR
Sbjct: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK PPL+EKSENELADYCST++GDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIG LHGIA IHK K SE EA  PLN VE R  DCP+PDGLPKSAEEIEEEE +RMPDS
Sbjct: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Sed0006883 vs. ExPASy Swiss-Prot
Match: Q9XIM0 (CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.1e-58
Identity = 120/210 (57.14%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRP---RLSSAVVRCSSRSHAYIPKLEPFSRTK 60
           ++S  LRS   P+    T       F  RP     S  VVRCSS     +PKLE FSR K
Sbjct: 2   IKSVTLRSFHLPIEFNDTK------FVSRPCFLARSFPVVRCSSTRD--VPKLELFSRGK 61

Query: 61  LDRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAG 120
            DR ++ PPLIEK+E+EL+DYCST+EGDDSYSCW+AYFELKDLE+E PK EVE LILQ G
Sbjct: 62  FDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTG 121

Query: 121 GVKSLIGCLHGIADIHKSKGSE--YEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQS 180
           G+KSLIGCLHG+A + K   ++         +  +G      +PDGLPKS +E+EEEE+S
Sbjct: 122 GLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEKS 181

Query: 181 RMPDSPFTRLLRSKGTFPAWYSPAPDHETD 206
           +MPDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 182 KMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of Sed0006883 vs. ExPASy TrEMBL
Match: A0A6J1JH09 (CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93
Identity = 175/205 (85.37%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES FLRSVSSPLLLESTDL R  G A  PR  S VVRCSSRSHA IPKL+PFSRTKLDR
Sbjct: 1   MESSFLRSVSSPLLLESTDLLRRIGSASSPRFPSTVVRCSSRSHASIPKLKPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK PPL+EKSENELADYCST++GDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIG LHGIA IHK K SE EA  PLNGVE R  DCP+PDGLPKSAEEIEEEE +RMPDS
Sbjct: 121 SLIGLLHGIAGIHKKKESENEAKKPLNGVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Sed0006883 vs. ExPASy TrEMBL
Match: A0A6J1D4D3 (CCG-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111017166 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 172/205 (83.90%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES  LRS+SSP LLE+TDL R +G A     SS+ VRCSSRSHAYIPKLEPFSRTKLDR
Sbjct: 1   MESFILRSISSPFLLEATDLRR-TGSA-----SSSAVRCSSRSHAYIPKLEPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK+PPLIEKSE+ELADYCST+EGDDSYSCWKAYFELKDLEK+SPKQEVEKLILQAGGVK
Sbjct: 61  AIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEKDSPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIGCLHGIA IHK KGSE  A  PLNG EGR T CP+PDGLPKSAEE+EEEE++RMPDS
Sbjct: 121 SLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEEERARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYSPAPDHETD 199

[Close]

BLAST of Sed0006883 vs. ExPASy TrEMBL
Match: A0A6J1FRB4 (CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.5e-91
Identity = 172/205 (83.90%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRPRLSSAVVRCSSRSHAYIPKLEPFSRTKLDR 60
           MES  LRS SSPLLLESTDL R  G    PR  S VVRCSSRSHA IPKLEPFSRTKLDR
Sbjct: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60

Query: 61  AIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK PPL+EKSENELADYCST++GDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRMPDS 180
           SLIG LHGIA IHK K SE EA  PLN VE R  DCP+PDGLPKSAEEIEEEE +RMPDS
Sbjct: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYSPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Sed0006883 vs. ExPASy TrEMBL
Match: A0A5A7TT03 (CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00750 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 169/209 (80.86%), Postives = 178/209 (85.17%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLH-RWSGFAHRPRLSSA-VVRCSSRSHAYIPKLEPFSRTKL 60
           MES  LRS+SSPLLLESTDLH R  G     R SS  VVR SS+SH+YIPKLEPFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPLIEKSENELADYCST+EGDDSYSCWKAYFELKDLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIADIHKSKGSEYEATMP-LNGVEGRGT-DCPVPDGLPKSAEEIEEEEQSR 180
           VKSLIGCLHGI  I KSKG E E       GVEGRG  +CP+PDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 206
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Sed0006883 vs. ExPASy TrEMBL
Match: A0A1S3C971 (CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 169/209 (80.86%), Postives = 178/209 (85.17%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLH-RWSGFAHRPRLSSA-VVRCSSRSHAYIPKLEPFSRTKL 60
           MES  LRS+SSPLLLESTDLH R  G     R SS  VVR SS+SH+YIPKLEPFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPLIEKSENELADYCST+EGDDSYSCWKAYFELKDLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCLHGIADIHKSKGSEYEATMP-LNGVEGRGT-DCPVPDGLPKSAEEIEEEEQSR 180
           VKSLIGCLHGI  I KSKG E E       GVEGRG  +CP+PDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYSPAPDHETD 206
           MPDS FTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Sed0006883 vs. TAIR 10
Match: AT2G15890.1 (maternal effect embryo arrest 14 )

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-59
Identity = 120/210 (57.14%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRP---RLSSAVVRCSSRSHAYIPKLEPFSRTK 60
           ++S  LRS   P+    T       F  RP     S  VVRCSS     +PKLE FSR K
Sbjct: 2   IKSVTLRSFHLPIEFNDTK------FVSRPCFLARSFPVVRCSSTRD--VPKLELFSRGK 61

Query: 61  LDRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAG 120
            DR ++ PPLIEK+E+EL+DYCST+EGDDSYSCW+AYFELKDLE+E PK EVE LILQ G
Sbjct: 62  FDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTG 121

Query: 121 GVKSLIGCLHGIADIHKSKGSE--YEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQS 180
           G+KSLIGCLHG+A + K   ++         +  +G      +PDGLPKS +E+EEEE+S
Sbjct: 122 GLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEKS 181

Query: 181 RMPDSPFTRLLRSKGTFPAWYSPAPDHETD 206
           +MPDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 182 KMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of Sed0006883 vs. TAIR 10
Match: AT2G15890.2 (maternal effect embryo arrest 14 )

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-49
Identity = 111/208 (53.37%), Postives = 132/208 (63.46%), Query Frame = 0


Query: 1   MESPFLRSVSSPLLLESTDLHRWSGFAHRP---RLSSAVVRCSSRSHAYIPKLEPFSRTK 60
           ++S  LRS   P+    T       F  RP     S  VVRCSS     +PKLE FSR K
Sbjct: 2   IKSVTLRSFHLPIEFNDTK------FVSRPCFLARSFPVVRCSSTRD--VPKLELFSRGK 61

Query: 61  LDRAIKQPPLIEKSENELADYCSTMEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAG 120
            DR ++ PPLIEK+E+EL+DYCST+EGDDSYSCW+AYFELKDLE+E PK EVE LILQ G
Sbjct: 62  FDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTG 121

Query: 121 GVKSLIGCLHGIADIHKSKGSEYEATMPLNGVEGRGTDCPVPDGLPKSAEEIEEEEQSRM 180
                             + S+ E  M L+          +PDGLPKS +E+EEEE+S+M
Sbjct: 122 ------------------EESDREKGMNLH--------IHIPDGLPKSEQELEEEEKSKM 175

Query: 181 PDSPFTRLLRSKGTFPAWYSPAPDHETD 206
           PDS FTRLLRSKGT PAW+S APDHETD
Sbjct: 182 PDSAFTRLLRSKGTIPAWFSHAPDHETD 175

The following BLAST results are available for this feature:

BLAST of Sed0006883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877912.1	7.4e-93	83.50	CCG-binding protein 1 [Benincasa hispida]	[more]
XP_022986608.1	9.7e-93	85.37	CCG-binding protein 1 [Cucurbita maxima]	[more]
XP_023512041.1	6.3e-92	84.88	CCG-binding protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022148538.1	4.1e-91	83.90	CCG-binding protein 1 [Momordica charantia]	[more]
XP_022943281.1	1.5e-90	83.90	CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, ...	[more]

BLAST of Sed0006883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIM0	8.1e-58	57.14	CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1	[more]

BLAST of Sed0006883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JH09	4.7e-93	85.37	CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1	[more]
A0A6J1D4D3	2.0e-91	83.90	CCG-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111017166 PE=4 SV=1	[more]
A0A6J1FRB4	7.5e-91	83.90	CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1	[more]
A0A5A7TT03	1.4e-84	80.86	CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A1S3C971	1.4e-84	80.86	CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1	[more]

BLAST of Sed0006883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15890.1	5.7e-59	57.14	maternal effect embryo arrest 14	[more]
AT2G15890.2	3.2e-49	53.37	maternal effect embryo arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..185
IPR037502	CCG-binding protein 1	PANTHER	PTHR36345	CCG-BINDING PROTEIN 1	coord: 7..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006883.1	Sed0006883.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010183	pollen tube guidance
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0036033	mediator complex binding