Homology
BLAST of Sed0006864 vs. NCBI nr
Match:
KAG7035533.1 (Nuclear pore complex protein NUP98A [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1369.8 bits (3544), Expect = 0.0e+00
Identity = 818/1121 (72.97%), Postives = 867/1121 (77.34%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG ST AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGSNT TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSNTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S FSMPFQ Q Q QAPTS FSNLG TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSSASFSMPFQ----QAQAQAPTSFFSNLGQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
+PRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 VPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1041
BLAST of Sed0006864 vs. NCBI nr
Match:
XP_022958352.1 (nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 815/1121 (72.70%), Postives = 865/1121 (77.16%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+++
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATNS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG S AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASAPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S FSMPFQ Q Q QAPTS FSNL TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSSASFSMPFQ----QAQAQAPTSFFSNLVQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1041
BLAST of Sed0006864 vs. NCBI nr
Match:
XP_023534368.1 (nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 816/1120 (72.86%), Postives = 863/1120 (77.05%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGSTSTPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSTSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPAF 240
AFG TS TPAFGATS S P FGTTSTPAFG TSTP FG ST AFG+T+TPAF
Sbjct: 181 PAFGTTS-TPAFGATS-------SAPAFGTTSTPAFGATSTPAFGAASTPAFGATSTPAF 240
Query: 241 GPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTPS 300
G T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+PS
Sbjct: 241 GSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSPS 300
Query: 301 FNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGGS 360
F+FGST A GQSTSAFGS+T TNTSPFGAQSSPFG QS TTF TS GQ FGGQRGGS
Sbjct: 301 FSFGSTPAFGQSTSAFGSSTFGTNTSPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGGS 360
Query: 361 RVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGHS 420
RV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG S
Sbjct: 361 RVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQS 420
Query: 421 TVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSSA 480
T GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSSA
Sbjct: 421 TGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSSA 480
Query: 481 PAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNPF 540
A PSS+SNPFASTT AS
Sbjct: 481 FA----------PSSSSNPFASTTAAS--------------------------------- 540
Query: 541 ASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAIS 600
++SSF SSTT Q G+SSLF SNAQP ASQPA S
Sbjct: 541 --------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAFS 600
Query: 601 STTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVGN 660
STTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG GN
Sbjct: 601 STTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGGN 660
Query: 661 LFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIAG 720
LFSSS SL TSSNP FGQ S FSMPFQ Q Q Q QAPTS FSNLG TQ GS S AG
Sbjct: 661 LFSSSPSLLTSSNPMGFGQSSASFSMPFQ--QAQAQAQAPTSFFSNLGQTQPIGSSSFAG 720
Query: 721 TSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMPV 780
TSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MPV
Sbjct: 721 TSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMPV 780
Query: 781 VDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLFI 840
VDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LFI
Sbjct: 781 VDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALFI 840
Query: 841 PREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAVA 900
PRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 PRENPRALVIRPTDQWPSRASSEKVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVVE 900
Query: 901 NGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMPK 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMPK
Sbjct: 901 NGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMPK 960
Query: 961 LRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIVQ 1020
LRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIVQ
Sbjct: 961 LRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIVQ 1020
Query: 1021 FNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRKK 1065
FNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRKK
Sbjct: 1021 FNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRKK 1035
BLAST of Sed0006864 vs. NCBI nr
Match:
XP_022995534.1 (nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1352.4 bits (3499), Expect = 0.0e+00
Identity = 814/1121 (72.61%), Postives = 863/1121 (76.98%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANAS-NLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANAS N FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASNNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGSTSTPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSTSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GS NQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSANQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGAT-SAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGAT SAPAFG TSTP FG TSTPAFG TSTP FG ST AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSAPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TNTSPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNTSPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P+YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPSYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SST+ Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTS-QFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL SSNP FGQ S FSMPFQ Q Q Q PTS FSNLG TQ GS S A
Sbjct: 661 NLFSSSPSL-LSSNPMGFGQSSASFSMPFQ----QAQAQGPTSFFSNLGQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQS FGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSIFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDG PRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGHPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMVVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKED RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNKKPNGVHEDHSAPKEDFYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVEDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1039
BLAST of Sed0006864 vs. NCBI nr
Match:
KAG6605623.1 (Nuclear pore complex protein NUP98A, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1352.0 bits (3498), Expect = 0.0e+00
Identity = 808/1109 (72.86%), Postives = 856/1109 (77.19%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG ST AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGSNT TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSNTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S Q QAPTS FSNLG TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSSA-------------QAQAPTSFFSNLGQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKWS------------------KDTSLRGNGNAVANGTTSNVSVHP 900
+PRE+PRALVI PTD+W KDT NGN V NGT+ + ++HP
Sbjct: 841 VPRENPRALVIRPTDQWPSRASKIAEGTSSMAVNNLKDT----NGNVVENGTSKD-NIHP 900
Query: 901 NKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPK 960
NKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPK
Sbjct: 901 NKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPK 960
Query: 961 IQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIVQFNNREVIVYLD 1020
+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIVQFNNREVIVYLD
Sbjct: 961 MQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIVQFNNREVIVYLD 1016
Query: 1021 ESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSH 1065
ESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSH
Sbjct: 1021 ESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSH 1016
BLAST of Sed0006864 vs. ExPASy Swiss-Prot
Match:
Q8RY25 (Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana OX=3702 GN=NUP98A PE=1 SV=1)
HSP 1 Score: 828.9 bits (2140), Expect = 6.3e-239
Identity = 583/1121 (52.01%), Postives = 710/1121 (63.34%), Query Frame = 0
Query: 1 MFSSANPFVQPI-SSPFPSQQVSGQTANAS--NLFAP-KPFGSTSTFGSQTGNSVFGGTS 60
MF S+NPF Q +SPF SQ + GQT+N S N FAP PFG+++ F +Q+G+S+FG TS
Sbjct: 1 MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTS 60
Query: 61 TGVFGATQSSSPFSSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSSLFGAFGSTNQQS 120
TGVFGA Q+SSPF+ST TFG SSSPAFG STPAFG+S +S FG ++
Sbjct: 61 TGVFGAPQTSSPFASTPTFGASSSPAFG--------NSTPAFGASPAS--SPFGGSSGFG 120
Query: 121 QPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASSTIAFGATSNTP 180
Q +G + QS P FG++ QQSQPAFG+ F SS+PFGAT+ AFGA ST +FGATS TP
Sbjct: 121 QKPLGFSTPQSNP-FGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATS-TP 180
Query: 181 AFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTP----------AF 240
+FGA+S PAFGAT+TP FG +++P+FG T+TP FG + T AFGST T AF
Sbjct: 181 SFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAF 240
Query: 241 GPTTTSAFGSTGN-AFGSLSTPGFGSGG--GFGASSTSAFGVSSTP-FGAPSASAFGPSS 300
G + T AFG++G AFG+ TP FG+ FGASST AFG SSTP FG S +FG S+
Sbjct: 241 GASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASN 300
Query: 301 TPSFNFGSTSALGQSTSAFGSNTSTNTSPFGAQSSPFGTQSAT--TFTTSSLGQTSFGGQ 360
T SF+FGS+ A GQSTSAFGS S FG+ SPFG A+ TF S GQ++FGGQ
Sbjct: 301 TSSFSFGSSPAFGQSTSAFGS------SAFGSTPSPFGGAQASTPTFGGSGFGQSTFGGQ 360
Query: 361 RGGSRVAPFAPTPEPD-AAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPA 420
+GGSR P+APT E D G K +S+SA+P YK+K++EELRWEDYQ GDKGGPLPA
Sbjct: 361 QGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLPA 420
Query: 421 GHSTVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSS 480
G S GFG+S SQP NPFS PS F S+
Sbjct: 421 GQSPGNAGFGISPSQP-------------NPFS-----------------PSPAFGQTSA 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTP--ASNPFASTTPAS 540
P TN FS S+++NPFA TP T AS+ F + T S+PF T +S
Sbjct: 481 NP-----TNPFS-SSTSTNPFAPQTP--------TIASSSFGTATSNFGSSPF-GVTSSS 540
Query: 541 NPFASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQP 600
N F S S+ S +S+ F +T P+ F SS+TP G+SS F S P
Sbjct: 541 NLFGS---GSSTTTSVFGSSSAFGTTTPSPL--FGSSSTPGFGSSSSI-------FGSAP 600
Query: 601 AISSTTSLG-TNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSG 660
+T + G + P+ N + Q+ F T + GQ G + A F Q S+F++PS+G
Sbjct: 601 GQGATPAFGNSQPSTLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTG 660
Query: 661 AVGNLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSL-FSNLGHTQLNGS 720
GN+FSSSS+L TSS+ + FGQ PFQ AQP QA F+N G Q +
Sbjct: 661 -FGNMFSSSSTLTTSSS-SPFGQTMPAGVTPFQSAQP---GQASNGFGFNNFGQNQAANT 720
Query: 721 ISIAGTSSIFGQSNFGQSPI-TQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGI 780
AG IFGQ NFGQSP S V+QP TNPFGTLP +PQ+SI+ + IQYGI
Sbjct: 721 TGNAGGLGIFGQGNFGQSPAPLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGI 780
Query: 781 STMPVVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----L 840
S+MPVVDK APVRISS LT HL HRR+R P RKY P +G P+VPFF++DE++
Sbjct: 781 SSMPVVDKPAPVRISSLLTSRHLLHRRVRLPARKYRPGENG-PKVPFFTDDEESSSTPKA 840
Query: 841 GPLFIPREDPRALVICPTDKW-SKDTSL-----------------------------RGN 900
LFIPRE+PRALVI P +W S+D S+ GN
Sbjct: 841 DALFIPRENPRALVIRPVQQWSSRDKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGN 900
Query: 901 GNAVANGTTSNVSVHPNKVNRKPNG-VHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADI 960
G A G + SV+ N+KPNG D ++ KE +T GHRAGEAAIVYEHGADI
Sbjct: 901 GELGATGERIHTSVN---ANQKPNGTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADI 960
Query: 961 EALMPKLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLD 1020
EALMPKLR SDY+TEP+IQELAAKERA+PG+C V+DFVVGRHGYGSIKF G TDVRRLD
Sbjct: 961 EALMPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLD 1020
Query: 1021 LESIVQFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYK 1060
LES+VQFN REVIVY+DESKKP VGQGLNKPAEVTLLNIKC +KKTG Q+TEG +VEKYK
Sbjct: 1021 LESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKYK 1037
BLAST of Sed0006864 vs. ExPASy Swiss-Prot
Match:
F4ID16 (Nuclear pore complex protein NUP98B OS=Arabidopsis thaliana OX=3702 GN=NUP98B PE=1 SV=1)
HSP 1 Score: 756.1 bits (1951), Expect = 5.2e-217
Identity = 543/1099 (49.41%), Postives = 685/1099 (62.33%), Query Frame = 0
Query: 3 SSANPFVQ-PISSPFPSQQVS--GQTAN--ASNLFAPKPFGSTSTFGSQTGNSVFGGTST 62
S+ NPF Q ISSPF +Q S GQT N ++N FA KPFG+++ FG+QTG+S+FGGTST
Sbjct: 5 SNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATKPFGTSTPFGAQTGSSMFGGTST 64
Query: 63 GVFGATQSSSPFSSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSSLFGAFGSTNQQSQ 122
GVFGA Q+SSPF G+S AFG+S FG++STP+FGSS+S FG T+ Q
Sbjct: 65 GVFGAPQTSSPF-------GASPQAFGSSTQAFGASSTPSFGSSNS----PFGGTSTFGQ 124
Query: 123 PAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASSTIAFGAT----- 182
+ G + QS P FGST QQSQPAFG++ F SS+PFGA++ AFGASST AFG +
Sbjct: 125 KSFGLSTPQSSP-FGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGASSTPAFGVSNTSGF 184
Query: 183 --SNTPAFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPAFGPTT 242
+NTP FGAT+ FG +STP FG +STPAFG+T+TP FG +ST FGS+++PAFG +
Sbjct: 185 GATNTPGFGATNTTGFGGSSTPGFGASSTPAFGSTNTPAFGASSTPLFGSSSSPAFGASP 244
Query: 243 TSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTPFGAPSASAFGPSSTPSFNFGS 302
AFGS+GNAFG+ + F SGG FG+SST FG S+T SAFG SS+PSFNFGS
Sbjct: 245 APAFGSSGNAFGNNT---FSSGGAFGSSSTPTFGASNT-------SAFGASSSPSFNFGS 304
Query: 303 TSALGQSTSAFGSNTSTNT-SPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGGSRVAPF 362
+ A GQSTSAFGS++ +T S G+ SPFG Q A T++ GQ++ GGQ+GGSRV P+
Sbjct: 305 SPAFGQSTSAFGSSSFGSTQSSLGSTPSPFGAQGAQASTSTFGGQSTIGGQQGGSRVIPY 364
Query: 363 APTPEPDAAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGHSTVGVGFG 422
APT + + + + + QS+SA+P +K K+ EELRWEDYQ GDKGG G S G GFG
Sbjct: 365 APTTDTASGTESKSERLQSISAMPAHKGKNMEELRWEDYQRGDKGGQRSTGQSPEGAGFG 424
Query: 423 VSTSQPNL-QASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSSAPAPSISTN 482
V+ SQP++ S FSQ+ NP TNP F +T S+ + +P+
Sbjct: 425 VTNSQPSIFSTSPAFSQTPVNP------TNP--------FSQTTPTSNTNFSPS------ 484
Query: 483 LFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNPFASTTPASN 542
FS P++ S F T S F ST SN +T+ + + TT S P S+ S
Sbjct: 485 -FSQPTTPS--FGQPTTPS--FRST--VSN---TTSVFGSSSSLTTNTSQPLGSSIFGST 544
Query: 543 PFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAISSTTSLGTN 602
P +TP S+ +N+Q S+ G+N
Sbjct: 545 PAHGSTP-------------------------GFSIGGFNNSQ---------SSPLFGSN 604
Query: 603 PTFPSNLNSNNTQSSPLF-QATTPSIGQTGSAFA----APFSQPSLFSQPSSGAVGNLFS 662
P+F N +Q+SPLF Q TTP++GQ+ S F Q + FS PS+G GN FS
Sbjct: 605 PSFAQNTTPAFSQTSPLFGQNTTPALGQSSSVFGQNTNPALVQSNTFSTPSTG-FGNTFS 664
Query: 663 SSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIAGTSS 722
SSSSL TS +P FGQ+ TP PFQ AQP QP F+N G TQ+ + IAG
Sbjct: 665 SSSSLTTSISP--FGQI-TPAVTPFQSAQP-TQPLGAFG-FNNFGQTQIANTTDIAGAMG 724
Query: 723 IFGQSNFGQSP-ITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGISTMPVVDK 782
F Q NF Q P + S V+QPTP TNPFGTLP LPQ+SI+ + IQYGIS+MPVVDK
Sbjct: 725 TFSQGNFKQQPALGNSAVMQPTPVTNPFGTLPALPQISIAQGGNSPSIQYGISSMPVVDK 784
Query: 783 AAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLFIPRE 842
APVR+S LT HL RR+R PTRKY P +DG P+VPFFS++E+ FIPRE
Sbjct: 785 PAPVRVSPLLTSRHLLQRRVRLPTRKYRPSDDG-PKVPFFSDEEENSSTPKADAFFIPRE 844
Query: 843 DPRALVICPTDKWSKD------TSLRGNG---NAVANG----TTSNVSVH---PNKVNRK 902
+PRAL I P ++ + T L+ NG N V NG T N ++ P KVN+K
Sbjct: 845 NPRALFIRPVERVKSEHPKDSPTPLQENGKRSNGVTNGANHETKDNGAIREAPPVKVNQK 904
Query: 903 PNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAA 962
NG HE+H K G H + GADIE+LMPKL HS+Y+TEP+IQELAA
Sbjct: 905 QNGTHENHGGDKN------GSHSS-------PSGADIESLMPKLHHSEYFTEPRIQELAA 964
Query: 963 KERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIVQFNNREVIVYLDESKKPP 1022
KER E G+C V+DFVVGRHGYGSIKF G TDV RLDLE +VQF NREV VY+DESKKPP
Sbjct: 965 KERVEQGYCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPP 997
Query: 1023 VGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSHDTVKGE 1061
VGQGLNKPA VTLLNIKC +KKTG Q EG +++KYKE+L++K QGA+FVS+D V GE
Sbjct: 1025 VGQGLNKPAVVTLLNIKCMDKKTGTQVMEGERLDKYKEMLKRKAGEQGAQFVSYDPVNGE 997
BLAST of Sed0006864 vs. ExPASy Swiss-Prot
Match:
Q9VCH5 (Nuclear pore complex protein Nup98-Nup96 OS=Drosophila melanogaster OX=7227 GN=Nup98-96 PE=1 SV=3)
HSP 1 Score: 114.4 bits (285), Expect = 8.0e-24
Identity = 296/1107 (26.74%), Postives = 437/1107 (39.48%), Query Frame = 0
Query: 146 VFSSSSP-FGAT-SQSAFGASSTIAFGATSNTP----AFGATSAPAFGATSTPVFGTTST 205
+F + P FGAT + ++FG S G T+ TP AFG +APAFG TST
Sbjct: 1 MFGGAKPSFGATPAATSFGGFS----GTTTTTPFGQSAFGKPAAPAFGNTSTFAAQPAQQ 60
Query: 206 PAFGTTSTP------VFGVTSTSAFGSTTTPAFGPTTTSAFG---STGNAFGSLSTPGFG 265
FG +TP +FG +++ FGST T PT AF T N FGS T
Sbjct: 61 SLFGAAATPAQPAGGLFGANTSTGFGSTATAQ--PTAFGAFSQPQQTSNIFGSTQT---- 120
Query: 266 SGGGFGASSTSAFGVSSTPFGAPSASAFGPSSTPSFNFGSTSALGQSTSAFGS-NTSTNT 325
A+STS FG S+ P AFG + FG T+A + S FG +T+T
Sbjct: 121 ------AASTSLFGQSTLP-------AFGAAKPTMTAFGQTAAAQPTGSLFGQPAAATST 180
Query: 326 SPFG--AQSSP-----FGTQSATTFTTSSLGQTSFGGQRGGSRVAPFAPTPEPD----AA 385
+ FG S+P FG+ +A+ F G G+ VA + PT D +
Sbjct: 181 TGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTAVAKYQPTIGTDTLMKSG 240
Query: 386 GANT-TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGHSTVGVGFGVSTSQPNL 445
AN+ +K ++A+ ++ KS EELR EDY G KG AG++ GFG +QP
Sbjct: 241 QANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGP--QAGNAPGAFGFGAQVTQPAQ 300
Query: 446 QASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSSAPAPSISTNLFSMPSSAS 505
AS S + P + G+FG + T N S T F + +
Sbjct: 301 PASGGLFGSTAQPST-------------GLFGQTVT--ENKS----MFGTTAFGQQPATN 360
Query: 506 NPFASTTPAS----YPFASTTPASNPFAS-TTPASNPFASTTPASNPFAS------TTPA 565
N F + T + PF +TT + PFA+ ASNPF + PA S T A
Sbjct: 361 NAFGAATQQNNFLQKPFGATT--TTPFAAPAADASNPFGA-KPAFGQGGSLFGQAPATSA 420
Query: 566 SNPFASTTPASNPFASTGPASTSSFPSSTTPQLG-NSSLFSLSNAQPFASQPAISSTTSL 625
+ F T F +T A+ S TP N S F L A A ++TT
Sbjct: 421 APAFGQTNTGFGGFGTTAGATQQSTLFGATPAADPNKSAFGLGTA-------ASAATTGF 480
Query: 626 GTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVGNLFSSS 685
G S + P P+ G T +A + PFS L + ++ G LF+S
Sbjct: 481 GFGAPATSTAGGGLFGNKPATSFAAPTFGATSTA-STPFSNFGL-NTSTAATGGGLFNSG 540
Query: 686 SSL----------QTSSNPTSFGQLSTPFSMPFQPAQP------------QPQPQAP--- 745
+ TS+ P +F +T S+ A+P AP
Sbjct: 541 LNKPATSGFGGFGATSAAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGG 600
Query: 746 -----TSLFSNLGHTQLNGSISIAGTSSIFG-----QSNFGQSPITQSPVVQPTPA--TN 805
T+ F +G + G + +S+ G Q G + P+ Q A T+
Sbjct: 601 LFGGGTTSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQILARVTS 660
Query: 806 PFGTLPTLPQMSISSRPGATPI---------------QYGISTMPVVDKAAPVRISSFLT 865
P+G P + +SS AT QY IST + AP+++ + +
Sbjct: 661 PYGDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTS---NNPAPMKVKALGS 720
Query: 866 PCHLSHRRMRYPTRKYNPKNDG------------RPRVPFF--SEDEDTLGPL-FIPRED 925
L+ + + +++ +G +P+V ++G P+
Sbjct: 721 T--LNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSVEGGNPSSSIGSAPNTPQSR 780
Query: 926 PRALVICPTDKW--------SKDTSLRGNGNAVANGTTSNVS------VHPNK------- 985
P+ P + S+ GN NG S + +HPN
Sbjct: 781 PKGAT--PNKERESFSGAIPSEPLPPAGNSPGATNGRESQDNGRRESWLHPNNLEKVRQH 840
Query: 986 -------------------VNRKPNGVHEDHSA-----------PKEDLC------RTFG 1045
V RKP + S P ED TF
Sbjct: 841 NIQTGMDQGSPHNSTLNELVPRKPLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFT 900
Query: 1046 GHRAGEAAI-----------VYEHGADIEALMPK------------LRHSDYYTEPKIQE 1063
+A E+ + + IEA + LR YYT P + +
Sbjct: 901 SQQANESVLSNRSNEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDD 960
BLAST of Sed0006864 vs. ExPASy Swiss-Prot
Match:
Q9UTK4 (Nucleoporin nup189 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nup189 PE=1 SV=2)
HSP 1 Score: 114.0 bits (284), Expect = 1.0e-23
Identity = 306/1092 (28.02%), Postives = 456/1092 (41.76%), Query Frame = 0
Query: 90 FGSTSTPAFGSSSSSLFGAFGSTNQQSQPAIGS-TNQQSQPAFGSTNQQSQPAFGSNVFS 149
FG ++ FG + GAFG NQQ+ GS +N FGS N S FG N
Sbjct: 2 FGQNNSSGFGGGT----GAFGQNNQQTGGLFGSNSNTPGNTLFGSQN-TSTTGFGQN--- 61
Query: 150 SSSPFGATSQSAFGASSTIA-FGATSNTPAFGATSAPAFGATS-TPVFGTTSTPAFGTTS 209
T+Q FG+++ FG +NT G T FG +S T +FG ++TPAFG T+
Sbjct: 62 -------TTQPLFGSNTNGGLFGNRNNTTTTGGT---GFGMSSGTGMFGQSNTPAFGGTN 121
Query: 210 TPVFGVTSTSAFGSTTTPAFGPTTTS-AFGSTGNAFGSLST-PGFGSGGG-FGASSTSAF 269
+ FGS T T TS +FGS + G +T G+GGG FG+ + +
Sbjct: 122 NAT-NPSGGGLFGSNTANNNANTGTSFSFGSNAGSTGFGNTASNTGTGGGLFGSQNNAGN 181
Query: 270 GVSSTPFGAPSASA--FGPSSTPSFNFGSTSALGQSTSAFGSN--TSTNTSPFGAQSSPF 329
+T FG+ FG S+TP+ +T+AFG++ S+N + ++P
Sbjct: 182 TAGNTGFGSQGTGGGLFGSSTTPA-----------TTNAFGTSGFVSSNANAVNGTANP- 241
Query: 330 GTQSATTFTTSSLGQTSFGGQRGGSRVAPFAPTPEPDAAGANTTSKFQSMSAIPNYKDKS 389
P+A T E D N TS FQS++ +P Y+ S
Sbjct: 242 ----------------------------PYAVTSEKDPQ-TNGTSVFQSITCMPAYRSYS 301
Query: 390 HEELRWEDYQLGDKGGPLPAGHSTVGVG----FGVSTSQPNLQASSTFSQSNSNPFSTAV 449
EELR +DY G + G + ++T G FG ST+ S T +N+ PF T+
Sbjct: 302 FEELRLQDYNQGRRFGNASSTNTTSAFGSTPAFGASTTPFGQNLSGT--TNNATPFGTSN 361
Query: 450 STNPPKSSGFGIFGPSTTFSSNSSAPAPSISTNLFSMPSSASNPFASTTPASYPFASTT- 509
+TN + G G+FG + F SN++ TN S N ++TP++ F +T
Sbjct: 362 ATN--TTPGSGLFGGGSAFGSNTTNTGFGSGTNNASGGLFGQNNNTTSTPSTGLFGGSTF 421
Query: 510 ----PASNPFASTTPASNP------FASTTPASNPFASTTPASNPFASTTPASNPFASTG 569
PA + F STT +N F S + TT A+T + +STG
Sbjct: 422 NQQKPAFSGFGSTTNTTNTGTGTGLFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSSTG 481
Query: 570 --PASTSSFPSSTTPQLG------------------------NSSLFSLSNAQPFASQPA 629
++T++ P+S T G NSS FS A++P+
Sbjct: 482 GFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAATKPS 541
Query: 630 ---ISSTTSLGTNPTFPSNLNSNNTQSSPLFQAT-------------------------T 689
STT+ + F N+NN P F +T T
Sbjct: 542 GFGFGSTTTTPASGGFSFGQNANNA-PKPAFGSTATTAPKPAGTGLFGGLGAGANTNTAT 601
Query: 690 PSIGQTGSAFA-APFSQPSLF-----SQPSSGAVGN-------------LFSSSSSLQTS 749
+ G GS F A + ++F S P +G G+ LF S+++ T+
Sbjct: 602 NATGTGGSLFGNANTAGSNMFGSANSSTPGTGLFGSTQTNNATSNTGTGLFGSNNANTTN 661
Query: 750 SNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIAGTSSIFGQSNFG 809
+ + F + ST F Q QP TS +T S GT +FG S G
Sbjct: 662 TGGSLFNKPSTTTGGLFGNTTAQ-QPSTTTSGLFGASNTNNQAQTSNFGT-GLFGGSQAG 721
Query: 810 QSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGISTMPVVDKAAPVRISS- 869
Q Q +Q + NP+G P S +S+ T IQ I++ P+ K P + +S
Sbjct: 722 Q----QQQPLQASIDQNPYGNNPLF--SSTTSQVAPTSIQEPIAS-PLTSKPTPKKAASL 781
Query: 870 ---FLTPCHLSHRRMRYPTRKYNPKN--------DGRPRV--PFFSEDEDTL--GPLFIP 929
+L+P SH R + K+ G+P+ F S ++D L F P
Sbjct: 782 PQFWLSP--RSHNTARLASISSFAKSAVMNSTSASGKPKSLHLFDSLNDDVLLSADAFTP 841
Query: 930 REDPRALVICPTDKWSKDTSLRGNGNAVANGTTSNVSVHPNKVNRKPNGVHEDHSAPKED 989
R++ + LVI T K SKD L+ N V NG N + +KV K D S K+
Sbjct: 842 RQNIKKLVI--THKISKDDILQ---NGVKNG---NDAKSDSKVQEKAPQNEADGSLKKD- 901
Query: 990 LCRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCCHVQD 1049
EH + DY+ +P I+EL+ + + C V
Sbjct: 902 -----------------EH---------VVLSDDYWMKPSIEELSKYPKEK---LCSVHQ 961
Query: 1050 FVVGRHGYGSIKFFGGTDVRRLD-LESI----VQFNNREVIVYLDESKKPPVGQGLNKPA 1063
F VGR GYG + F D+ + LE I V F + VY E PP+G+GLN PA
Sbjct: 962 FSVGRTGYGQVAFLKPVDLSGFEKLEDIPGKVVVFERKICAVYPVEGSSPPLGEGLNVPA 976
BLAST of Sed0006864 vs. ExPASy Swiss-Prot
Match:
Q6PFD9 (Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2)
HSP 1 Score: 113.6 bits (283), Expect = 1.4e-23
Identity = 271/962 (28.17%), Postives = 386/962 (40.12%), Query Frame = 0
Query: 194 FGTT---STPAFGTTSTPVFGVTSTSAFGSTTTPAFGPTTTSAFGSTGNAFGSLSTPGFG 253
FGT ST FGTTST FG + FG+T+ AFG TSAFGS+ N G
Sbjct: 6 FGTPFGGSTGGFGTTST--FG--QNTGFGTTSGGAFG---TSAFGSSNNTGGLFGNSQTK 65
Query: 254 SGGGFGASSTSAFGVS-STPFG-----APSASAFGPSSTPSFNFGSTSALGQSTSAFGSN 313
GG FG SS S S ST FG S S FG +ST TS +AF N
Sbjct: 66 PGGLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTAST------GTSLFSSQNNAFAQN 125
Query: 314 TSTNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGGS--RVAP------FAPTPEPD 373
T FG +S G T T++ G TS G G S AP F P D
Sbjct: 126 KPTGFGNFGTSTSSGGLFGTTNTTSNPFGSTS-GSLFGPSSFTAAPTGTTIKFNPPTGTD 185
Query: 374 -----AAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGHSTVGVGFGVS 433
N ++K Q ++A+ Y+ KS EELR EDYQ KG G T FG
Sbjct: 186 TMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGGGTTAGLFG-- 245
Query: 434 TSQPNLQASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTT-FSSNSS---APAPSIST 493
+S A+ FS S +N +A S K++ FG STT F +N +T
Sbjct: 246 SSPATSSATGLFSSSTTN---SAFSYGQNKTA----FGTSTTGFGTNPGGLFGQQNQQTT 305
Query: 494 NLFSMPSSASNPFASTTP-ASYPFASTTPASNPFAST------TPASNPFASTTPASNPF 553
+LFS P A+TTP + F +T+ P +T T AS P A+N
Sbjct: 306 SLFSKPFGQ----ATTTPNTGFSFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTS 365
Query: 554 ASTT--PASNPFASTTPASNPFAST--GPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQ 613
T + F ST G ++F +STT ++ F ++ F ++
Sbjct: 366 TGTAFGTGTGLFGQPNTGFGAVGSTLFGNNKLTTFGTSTT----SAPSFGTTSGGLFGNK 425
Query: 614 PAISSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPF------SQPSLF 673
P T +LGTN T SN S + P+ G G+ F Q SLF
Sbjct: 426 P----TLTLGTN-TNTSNFGFGTNNSGSSIFGSKPAAGTLGTGLGTGFGTALGAGQASLF 485
Query: 674 --SQPS-SGAVGNLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNL 733
+QP G +G + TS+ FG PQAP +L
Sbjct: 486 GNNQPKIGGPLGTGAFGAPGFNTSTAILGFG-----------------APQAPVAL---- 545
Query: 734 GHTQLNGSISIAGTSSIFGQ-------SNFGQSPITQSPVVQPTPATNPFGTLPTLPQMS 793
T N S A ++ Q S FG SP+ ++P+ P PT P
Sbjct: 546 --TDPNAS---AAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERL--KPTNP--- 605
Query: 794 ISSRPGATPIQYGISTMPVVDKAAPVRISSFLTPCHL---------SHRRMRYPTRKYNP 853
+ + TP Y ++ P ++ HL S + +K
Sbjct: 606 AAQKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIK 665
Query: 854 K------NDGRPRVPFFSEDEDTLGPLFIPREDPR-ALVICPTDKWSKDTSLRGNGNAVA 913
K N+ P + ED P P R + + P D ++ G +++
Sbjct: 666 KLVLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVD---ENNQQDGEDDSLV 725
Query: 914 NGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRA------GEAAIVYEHGADI 973
+ +N P + G + S+ ED A G + H +
Sbjct: 726 SRFYTNPIAKPIPQTPESVGNKNNSSSNVEDTIVALNMRAALRNGLEGSSEETSFHDESL 785
Query: 974 EALMPKLRHS--------------DYYTEPKIQELA--AKERAEPGFCCHVQDFVVGRHG 1033
+ ++ ++ YYT P + +LA E+ E C V DF +GR G
Sbjct: 786 QDDREEIENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGE----CIVSDFTIGRKG 845
Query: 1034 YGSIKFFGGTDVRRLDLESIVQFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNK 1063
YGSI F G ++ L+L+ IV +EVIVY+D+++KPPVG+GLN+ AEVTL + +K
Sbjct: 846 YGSIYFEGDVNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDK 893
BLAST of Sed0006864 vs. ExPASy TrEMBL
Match:
A0A6J1H1L4 (nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459600 PE=4 SV=1)
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 815/1121 (72.70%), Postives = 865/1121 (77.16%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+++
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATNS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG S AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASAPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S FSMPFQ Q Q QAPTS FSNL TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSSASFSMPFQ----QAQAQAPTSFFSNLVQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1041
BLAST of Sed0006864 vs. ExPASy TrEMBL
Match:
A0A6J1K642 (nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491040 PE=4 SV=1)
HSP 1 Score: 1352.4 bits (3499), Expect = 0.0e+00
Identity = 814/1121 (72.61%), Postives = 863/1121 (76.98%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANAS-NLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANAS N FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASNNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGSTSTPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSTSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GS NQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSANQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGAT-SAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGAT SAPAFG TSTP FG TSTPAFG TSTP FG ST AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSAPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TNTSPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNTSPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P+YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPSYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SST+ Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTS-QFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL SSNP FGQ S FSMPFQ Q Q Q PTS FSNLG TQ GS S A
Sbjct: 661 NLFSSSPSL-LSSNPMGFGQSSASFSMPFQ----QAQAQGPTSFFSNLGQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQS FGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSIFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDG PRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGHPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMVVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKED RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNKKPNGVHEDHSAPKEDFYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVEDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1039
BLAST of Sed0006864 vs. ExPASy TrEMBL
Match:
A0A6J1H2W1 (nuclear pore complex protein NUP98A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459600 PE=4 SV=1)
HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 809/1121 (72.17%), Postives = 859/1121 (76.63%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+++
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATNS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG S AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASAPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S Q Q QAPTS FSNL TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSS-----------EQAQAQAPTSFFSNLVQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1034
BLAST of Sed0006864 vs. ExPASy TrEMBL
Match:
A0A6J1H4V4 (nuclear pore complex protein NUP98A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111459600 PE=4 SV=1)
HSP 1 Score: 1345.9 bits (3482), Expect = 0.0e+00
Identity = 808/1121 (72.08%), Postives = 858/1121 (76.54%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANA-SNLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANA SN FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGS+STPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSSSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GSTNQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+++
Sbjct: 121 GGFGSTPAQTNP-FGSTNQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATNS 180
Query: 181 IAFGATSNTPAFGATSA-PAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGATS+ PAFG TSTP FG TSTPAFG TSTP FG S AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASAPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TN SPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SSTT Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL TSSNP FGQ S Q QAPTS FSNL TQ GS S A
Sbjct: 661 NLFSSSPSLLTSSNPMGFGQSSA-------------QAQAPTSFFSNLVQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQSNFGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSNFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDGRPRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKEDL RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNQKPNGVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1032
BLAST of Sed0006864 vs. ExPASy TrEMBL
Match:
A0A6J1K485 (nuclear pore complex protein NUP98A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491040 PE=4 SV=1)
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 808/1121 (72.08%), Postives = 857/1121 (76.45%), Query Frame = 0
Query: 1 MFSSANPFVQPISSPFPSQQVSGQTANAS-NLFAPKPFGSTSTFGSQTGNSVFGGTSTGV 60
MF S NPF QP SSPF SQ V GQTANAS N FAPKPFGSTS FGSQ GNSVFGGT+TGV
Sbjct: 1 MFGSPNPFGQPSSSPFGSQPVFGQTANASNNPFAPKPFGSTSPFGSQAGNSVFGGTATGV 60
Query: 61 FGATQSSSPF-SSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSS------------LF 120
FGA QSSSPF SSTTTFGGSSSPAFGA TFGSTSTPAFGSSSSS LF
Sbjct: 61 FGAAQSSSPFASSTTTFGGSSSPAFGA--PTFGSTSTPAFGSSSSSSFGGSSIFGQKPLF 120
Query: 121 GAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASST 180
G FGST Q+ P GS NQQSQPAFGST+QQSQPAFGSNVF SSPFGA SQ AFGA+S+
Sbjct: 121 GGFGSTPAQTNP-FGSANQQSQPAFGSTSQQSQPAFGSNVF-GSSPFGAPSQPAFGATSS 180
Query: 181 IAFGATSNTPAFGAT-SAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPA 240
AFG TS TPAFGAT SAPAFG TSTP FG TSTPAFG TSTP FG ST AFG+T+TPA
Sbjct: 181 PAFGTTS-TPAFGATSSAPAFGTTSTPAFGATSTPAFGATSTPAFGAASTPAFGATSTPA 240
Query: 241 FGPTTTSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTP-FGAPSASAFGPSSTP 300
FG T+T AFGSTG++FGSLSTP FGSGGGFGASST FGVSSTP FGA S AFG SS+P
Sbjct: 241 FGSTSTPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSP 300
Query: 301 SFNFGSTSALGQSTSAFGSNT-STNTSPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGG 360
SF+FGST A GQSTSAFGS+T TNTSPFGAQSSPFG QS TTF TS GQ FGGQRGG
Sbjct: 301 SFSFGSTPAFGQSTSAFGSSTFGTNTSPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGG 360
Query: 361 SRVAPFAPTPEPDAAGANT--TSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGH 420
SRV P+APT EPD+ +T K +S+SA+P+YKDKSHEELRWEDYQLGDKGGPLPAG
Sbjct: 361 SRVTPYAPTTEPDSGSGSTQAAGKLESISAMPSYKDKSHEELRWEDYQLGDKGGPLPAGQ 420
Query: 421 STVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNP--PKSSGFGIFGPSTTFSSNSS 480
ST GVGFGVST+QPNL ASSTFSQS+SNPFSTA STNP PK SGFG FGPSTTFS NSS
Sbjct: 421 STGGVGFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSS 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNP 540
A A PSS+SNPFASTT AS
Sbjct: 481 AFA----------PSSSSNPFASTTAAS-------------------------------- 540
Query: 541 FASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAI 600
++SSF SST+ Q G+SSLF SNAQP ASQPA
Sbjct: 541 ---------------------------TSSSFLSSTS-QFGSSSLFGSSNAQPLASQPAF 600
Query: 601 SSTTSLGTNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSGAVG 660
SSTTS GTN TFPS+LN +NTQSS LFQ+T PSIGQTGSAF APFSQPSLFSQPSSG G
Sbjct: 601 SSTTSPGTNLTFPSSLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGG 660
Query: 661 NLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIA 720
NLFSSS SL SSNP FGQ S Q Q Q PTS FSNLG TQ GS S A
Sbjct: 661 NLFSSSPSL-LSSNPMGFGQSS-----------EQAQAQGPTSFFSNLGQTQPIGSSSFA 720
Query: 721 GTSSIFGQSNFGQSPITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATP-IQYGISTMP 780
GTSSIFGQS FGQSPITQ+P+VQP PATNPFGTLP +PQMSI SRPGA P IQYGIS+MP
Sbjct: 721 GTSSIFGQSIFGQSPITQNPIVQPAPATNPFGTLPAMPQMSI-SRPGAAPSIQYGISSMP 780
Query: 781 VVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLF 840
VVDKAAPVRISSFLTP HLSHRRMR P RKYNPKNDG PRVPFFSEDE+T LF
Sbjct: 781 VVDKAAPVRISSFLTPRHLSHRRMRLPARKYNPKNDGHPRVPFFSEDEETPSTPKADALF 840
Query: 841 IPREDPRALVICPTDKW-----------SKDTSLR-------------------GNGNAV 900
IPRE+PRALVI PTD+W SKDTS+R NGN V
Sbjct: 841 IPRENPRALVIRPTDQWPSRASSERVLPSKDTSVRENGKIAEGTSSMVVNNLKDTNGNVV 900
Query: 901 ANGTTSNVSVHPNKVNRKPNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMP 960
NGT+ + ++HPNKVN+KPNGVHEDHSAPKED RTFGGHRAGEAAIVYEHGADIEALMP
Sbjct: 901 ENGTSKD-NIHPNKVNKKPNGVHEDHSAPKEDFYRTFGGHRAGEAAIVYEHGADIEALMP 960
Query: 961 KLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIV 1020
KLRHSDYYTEPK+QELAAKERAEPGFC HV+DFVVGRHG+GSIKFFG TDVRRLDLESIV
Sbjct: 961 KLRHSDYYTEPKMQELAAKERAEPGFCRHVEDFVVGRHGFGSIKFFGETDVRRLDLESIV 1020
Query: 1021 QFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRK 1065
QFNNREVIVYLDESKKPP GQGLNKPAEVT+LNIKCF+KKTGHQYTEGPKVEKYKELLRK
Sbjct: 1021 QFNNREVIVYLDESKKPPRGQGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRK 1032
BLAST of Sed0006864 vs. TAIR 10
Match:
AT1G10390.1 (Nucleoporin autopeptidase )
HSP 1 Score: 828.9 bits (2140), Expect = 4.5e-240
Identity = 583/1121 (52.01%), Postives = 710/1121 (63.34%), Query Frame = 0
Query: 1 MFSSANPFVQPI-SSPFPSQQVSGQTANAS--NLFAP-KPFGSTSTFGSQTGNSVFGGTS 60
MF S+NPF Q +SPF SQ + GQT+N S N FAP PFG+++ F +Q+G+S+FG TS
Sbjct: 1 MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTS 60
Query: 61 TGVFGATQSSSPFSSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSSLFGAFGSTNQQS 120
TGVFGA Q+SSPF+ST TFG SSSPAFG STPAFG+S +S FG ++
Sbjct: 61 TGVFGAPQTSSPFASTPTFGASSSPAFG--------NSTPAFGASPAS--SPFGGSSGFG 120
Query: 121 QPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASSTIAFGATSNTP 180
Q +G + QS P FG++ QQSQPAFG+ F SS+PFGAT+ AFGA ST +FGATS TP
Sbjct: 121 QKPLGFSTPQSNP-FGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATS-TP 180
Query: 181 AFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTP----------AF 240
+FGA+S PAFGAT+TP FG +++P+FG T+TP FG + T AFGST T AF
Sbjct: 181 SFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAF 240
Query: 241 GPTTTSAFGSTGN-AFGSLSTPGFGSGG--GFGASSTSAFGVSSTP-FGAPSASAFGPSS 300
G + T AFG++G AFG+ TP FG+ FGASST AFG SSTP FG S +FG S+
Sbjct: 241 GASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASN 300
Query: 301 TPSFNFGSTSALGQSTSAFGSNTSTNTSPFGAQSSPFGTQSAT--TFTTSSLGQTSFGGQ 360
T SF+FGS+ A GQSTSAFGS S FG+ SPFG A+ TF S GQ++FGGQ
Sbjct: 301 TSSFSFGSSPAFGQSTSAFGS------SAFGSTPSPFGGAQASTPTFGGSGFGQSTFGGQ 360
Query: 361 RGGSRVAPFAPTPEPD-AAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPA 420
+GGSR P+APT E D G K +S+SA+P YK+K++EELRWEDYQ GDKGGPLPA
Sbjct: 361 QGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLPA 420
Query: 421 GHSTVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSS 480
G S GFG+S SQP NPFS PS F S+
Sbjct: 421 GQSPGNAGFGISPSQP-------------NPFS-----------------PSPAFGQTSA 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTP--ASNPFASTTPAS 540
P TN FS S+++NPFA TP T AS+ F + T S+PF T +S
Sbjct: 481 NP-----TNPFS-SSTSTNPFAPQTP--------TIASSSFGTATSNFGSSPF-GVTSSS 540
Query: 541 NPFASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQP 600
N F S S+ S +S+ F +T P+ F SS+TP G+SS F S P
Sbjct: 541 NLFGS---GSSTTTSVFGSSSAFGTTTPSPL--FGSSSTPGFGSSSSI-------FGSAP 600
Query: 601 AISSTTSLG-TNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSG 660
+T + G + P+ N + Q+ F T + GQ G + A F Q S+F++PS+G
Sbjct: 601 GQGATPAFGNSQPSTLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTG 660
Query: 661 AVGNLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSL-FSNLGHTQLNGS 720
GN+FSSSS+L TSS+ + FGQ PFQ AQP QA F+N G Q +
Sbjct: 661 -FGNMFSSSSTLTTSSS-SPFGQTMPAGVTPFQSAQP---GQASNGFGFNNFGQNQAANT 720
Query: 721 ISIAGTSSIFGQSNFGQSPI-TQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGI 780
AG IFGQ NFGQSP S V+QP TNPFGTLP +PQ+SI+ + IQYGI
Sbjct: 721 TGNAGGLGIFGQGNFGQSPAPLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGI 780
Query: 781 STMPVVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----L 840
S+MPVVDK APVRISS LT HL HRR+R P RKY P +G P+VPFF++DE++
Sbjct: 781 SSMPVVDKPAPVRISSLLTSRHLLHRRVRLPARKYRPGENG-PKVPFFTDDEESSSTPKA 840
Query: 841 GPLFIPREDPRALVICPTDKW-SKDTSL-----------------------------RGN 900
LFIPRE+PRALVI P +W S+D S+ GN
Sbjct: 841 DALFIPRENPRALVIRPVQQWSSRDKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGN 900
Query: 901 GNAVANGTTSNVSVHPNKVNRKPNG-VHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADI 960
G A G + SV+ N+KPNG D ++ KE +T GHRAGEAAIVYEHGADI
Sbjct: 901 GELGATGERIHTSVN---ANQKPNGTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADI 960
Query: 961 EALMPKLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLD 1020
EALMPKLR SDY+TEP+IQELAAKERA+PG+C V+DFVVGRHGYGSIKF G TDVRRLD
Sbjct: 961 EALMPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLD 1020
Query: 1021 LESIVQFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYK 1060
LES+VQFN REVIVY+DESKKP VGQGLNKPAEVTLLNIKC +KKTG Q+TEG +VEKYK
Sbjct: 1021 LESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKYK 1037
BLAST of Sed0006864 vs. TAIR 10
Match:
AT1G10390.2 (Nucleoporin autopeptidase )
HSP 1 Score: 828.9 bits (2140), Expect = 4.5e-240
Identity = 583/1121 (52.01%), Postives = 710/1121 (63.34%), Query Frame = 0
Query: 1 MFSSANPFVQPI-SSPFPSQQVSGQTANAS--NLFAP-KPFGSTSTFGSQTGNSVFGGTS 60
MF S+NPF Q +SPF SQ + GQT+N S N FAP PFG+++ F +Q+G+S+FG TS
Sbjct: 1 MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTS 60
Query: 61 TGVFGATQSSSPFSSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSSLFGAFGSTNQQS 120
TGVFGA Q+SSPF+ST TFG SSSPAFG STPAFG+S +S FG ++
Sbjct: 61 TGVFGAPQTSSPFASTPTFGASSSPAFG--------NSTPAFGASPAS--SPFGGSSGFG 120
Query: 121 QPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASSTIAFGATSNTP 180
Q +G + QS P FG++ QQSQPAFG+ F SS+PFGAT+ AFGA ST +FGATS TP
Sbjct: 121 QKPLGFSTPQSNP-FGNSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATS-TP 180
Query: 181 AFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTP----------AF 240
+FGA+S PAFGAT+TP FG +++P+FG T+TP FG + T AFGST T AF
Sbjct: 181 SFGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAF 240
Query: 241 GPTTTSAFGSTGN-AFGSLSTPGFGSGG--GFGASSTSAFGVSSTP-FGAPSASAFGPSS 300
G + T AFG++G AFG+ TP FG+ FGASST AFG SSTP FG S +FG S+
Sbjct: 241 GASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASN 300
Query: 301 TPSFNFGSTSALGQSTSAFGSNTSTNTSPFGAQSSPFGTQSAT--TFTTSSLGQTSFGGQ 360
T SF+FGS+ A GQSTSAFGS S FG+ SPFG A+ TF S GQ++FGGQ
Sbjct: 301 TSSFSFGSSPAFGQSTSAFGS------SAFGSTPSPFGGAQASTPTFGGSGFGQSTFGGQ 360
Query: 361 RGGSRVAPFAPTPEPD-AAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPA 420
+GGSR P+APT E D G K +S+SA+P YK+K++EELRWEDYQ GDKGGPLPA
Sbjct: 361 QGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLPA 420
Query: 421 GHSTVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSS 480
G S GFG+S SQP NPFS PS F S+
Sbjct: 421 GQSPGNAGFGISPSQP-------------NPFS-----------------PSPAFGQTSA 480
Query: 481 APAPSISTNLFSMPSSASNPFASTTPASYPFASTTPASNPFASTTP--ASNPFASTTPAS 540
P TN FS S+++NPFA TP T AS+ F + T S+PF T +S
Sbjct: 481 NP-----TNPFS-SSTSTNPFAPQTP--------TIASSSFGTATSNFGSSPF-GVTSSS 540
Query: 541 NPFASTTPASNPFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQP 600
N F S S+ S +S+ F +T P+ F SS+TP G+SS F S P
Sbjct: 541 NLFGS---GSSTTTSVFGSSSAFGTTTPSPL--FGSSSTPGFGSSSSI-------FGSAP 600
Query: 601 AISSTTSLG-TNPTFPSNLNSNNTQSSPLFQATTPSIGQTGSAFAAPFSQPSLFSQPSSG 660
+T + G + P+ N + Q+ F T + GQ G + A F Q S+F++PS+G
Sbjct: 601 GQGATPAFGNSQPSTLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQNSIFNKPSTG 660
Query: 661 AVGNLFSSSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSL-FSNLGHTQLNGS 720
GN+FSSSS+L TSS+ + FGQ PFQ AQP QA F+N G Q +
Sbjct: 661 -FGNMFSSSSTLTTSSS-SPFGQTMPAGVTPFQSAQP---GQASNGFGFNNFGQNQAANT 720
Query: 721 ISIAGTSSIFGQSNFGQSPI-TQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGI 780
AG IFGQ NFGQSP S V+QP TNPFGTLP +PQ+SI+ + IQYGI
Sbjct: 721 TGNAGGLGIFGQGNFGQSPAPLNSVVLQPVAVTNPFGTLPAMPQISINQGGNSPSIQYGI 780
Query: 781 STMPVVDKAAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----L 840
S+MPVVDK APVRISS LT HL HRR+R P RKY P +G P+VPFF++DE++
Sbjct: 781 SSMPVVDKPAPVRISSLLTSRHLLHRRVRLPARKYRPGENG-PKVPFFTDDEESSSTPKA 840
Query: 841 GPLFIPREDPRALVICPTDKW-SKDTSL-----------------------------RGN 900
LFIPRE+PRALVI P +W S+D S+ GN
Sbjct: 841 DALFIPRENPRALVIRPVQQWSSRDKSILPKEQRPTAPLHDNGKSPDMATDAANHDRNGN 900
Query: 901 GNAVANGTTSNVSVHPNKVNRKPNG-VHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADI 960
G A G + SV+ N+KPNG D ++ KE +T GHRAGEAAIVYEHGADI
Sbjct: 901 GELGATGERIHTSVN---ANQKPNGTTRSDQASEKERPYKTLSGHRAGEAAIVYEHGADI 960
Query: 961 EALMPKLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLD 1020
EALMPKLR SDY+TEP+IQELAAKERA+PG+C V+DFVVGRHGYGSIKF G TDVRRLD
Sbjct: 961 EALMPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLD 1020
Query: 1021 LESIVQFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYK 1060
LES+VQFN REVIVY+DESKKP VGQGLNKPAEVTLLNIKC +KKTG Q+TEG +VEKYK
Sbjct: 1021 LESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKYK 1037
BLAST of Sed0006864 vs. TAIR 10
Match:
AT1G59660.1 (Nucleoporin autopeptidase )
HSP 1 Score: 756.1 bits (1951), Expect = 3.7e-218
Identity = 543/1099 (49.41%), Postives = 685/1099 (62.33%), Query Frame = 0
Query: 3 SSANPFVQ-PISSPFPSQQVS--GQTAN--ASNLFAPKPFGSTSTFGSQTGNSVFGGTST 62
S+ NPF Q ISSPF +Q S GQT N ++N FA KPFG+++ FG+QTG+S+FGGTST
Sbjct: 5 SNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATKPFGTSTPFGAQTGSSMFGGTST 64
Query: 63 GVFGATQSSSPFSSTTTFGGSSSPAFGASLSTFGSTSTPAFGSSSSSLFGAFGSTNQQSQ 122
GVFGA Q+SSPF G+S AFG+S FG++STP+FGSS+S FG T+ Q
Sbjct: 65 GVFGAPQTSSPF-------GASPQAFGSSTQAFGASSTPSFGSSNS----PFGGTSTFGQ 124
Query: 123 PAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATSQSAFGASSTIAFGAT----- 182
+ G + QS P FGST QQSQPAFG++ F SS+PFGA++ AFGASST AFG +
Sbjct: 125 KSFGLSTPQSSP-FGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGASSTPAFGVSNTSGF 184
Query: 183 --SNTPAFGATSAPAFGATSTPVFGTTSTPAFGTTSTPVFGVTSTSAFGSTTTPAFGPTT 242
+NTP FGAT+ FG +STP FG +STPAFG+T+TP FG +ST FGS+++PAFG +
Sbjct: 185 GATNTPGFGATNTTGFGGSSTPGFGASSTPAFGSTNTPAFGASSTPLFGSSSSPAFGASP 244
Query: 243 TSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTPFGAPSASAFGPSSTPSFNFGS 302
AFGS+GNAFG+ + F SGG FG+SST FG S+T SAFG SS+PSFNFGS
Sbjct: 245 APAFGSSGNAFGNNT---FSSGGAFGSSSTPTFGASNT-------SAFGASSSPSFNFGS 304
Query: 303 TSALGQSTSAFGSNTSTNT-SPFGAQSSPFGTQSATTFTTSSLGQTSFGGQRGGSRVAPF 362
+ A GQSTSAFGS++ +T S G+ SPFG Q A T++ GQ++ GGQ+GGSRV P+
Sbjct: 305 SPAFGQSTSAFGSSSFGSTQSSLGSTPSPFGAQGAQASTSTFGGQSTIGGQQGGSRVIPY 364
Query: 363 APTPEPDAAGANTTSKFQSMSAIPNYKDKSHEELRWEDYQLGDKGGPLPAGHSTVGVGFG 422
APT + + + + + QS+SA+P +K K+ EELRWEDYQ GDKGG G S G GFG
Sbjct: 365 APTTDTASGTESKSERLQSISAMPAHKGKNMEELRWEDYQRGDKGGQRSTGQSPEGAGFG 424
Query: 423 VSTSQPNL-QASSTFSQSNSNPFSTAVSTNPPKSSGFGIFGPSTTFSSNSSAPAPSISTN 482
V+ SQP++ S FSQ+ NP TNP F +T S+ + +P+
Sbjct: 425 VTNSQPSIFSTSPAFSQTPVNP------TNP--------FSQTTPTSNTNFSPS------ 484
Query: 483 LFSMPSSASNPFASTTPASYPFASTTPASNPFASTTPASNPFASTTPASNPFASTTPASN 542
FS P++ S F T S F ST SN +T+ + + TT S P S+ S
Sbjct: 485 -FSQPTTPS--FGQPTTPS--FRST--VSN---TTSVFGSSSSLTTNTSQPLGSSIFGST 544
Query: 543 PFASTTPASNPFASTGPASTSSFPSSTTPQLGNSSLFSLSNAQPFASQPAISSTTSLGTN 602
P +TP S+ +N+Q S+ G+N
Sbjct: 545 PAHGSTP-------------------------GFSIGGFNNSQ---------SSPLFGSN 604
Query: 603 PTFPSNLNSNNTQSSPLF-QATTPSIGQTGSAFA----APFSQPSLFSQPSSGAVGNLFS 662
P+F N +Q+SPLF Q TTP++GQ+ S F Q + FS PS+G GN FS
Sbjct: 605 PSFAQNTTPAFSQTSPLFGQNTTPALGQSSSVFGQNTNPALVQSNTFSTPSTG-FGNTFS 664
Query: 663 SSSSLQTSSNPTSFGQLSTPFSMPFQPAQPQPQPQAPTSLFSNLGHTQLNGSISIAGTSS 722
SSSSL TS +P FGQ+ TP PFQ AQP QP F+N G TQ+ + IAG
Sbjct: 665 SSSSLTTSISP--FGQI-TPAVTPFQSAQP-TQPLGAFG-FNNFGQTQIANTTDIAGAMG 724
Query: 723 IFGQSNFGQSP-ITQSPVVQPTPATNPFGTLPTLPQMSISSRPGATPIQYGISTMPVVDK 782
F Q NF Q P + S V+QPTP TNPFGTLP LPQ+SI+ + IQYGIS+MPVVDK
Sbjct: 725 TFSQGNFKQQPALGNSAVMQPTPVTNPFGTLPALPQISIAQGGNSPSIQYGISSMPVVDK 784
Query: 783 AAPVRISSFLTPCHLSHRRMRYPTRKYNPKNDGRPRVPFFSEDEDT-----LGPLFIPRE 842
APVR+S LT HL RR+R PTRKY P +DG P+VPFFS++E+ FIPRE
Sbjct: 785 PAPVRVSPLLTSRHLLQRRVRLPTRKYRPSDDG-PKVPFFSDEEENSSTPKADAFFIPRE 844
Query: 843 DPRALVICPTDKWSKD------TSLRGNG---NAVANG----TTSNVSVH---PNKVNRK 902
+PRAL I P ++ + T L+ NG N V NG T N ++ P KVN+K
Sbjct: 845 NPRALFIRPVERVKSEHPKDSPTPLQENGKRSNGVTNGANHETKDNGAIREAPPVKVNQK 904
Query: 903 PNGVHEDHSAPKEDLCRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKIQELAA 962
NG HE+H K G H + GADIE+LMPKL HS+Y+TEP+IQELAA
Sbjct: 905 QNGTHENHGGDKN------GSHSS-------PSGADIESLMPKLHHSEYFTEPRIQELAA 964
Query: 963 KERAEPGFCCHVQDFVVGRHGYGSIKFFGGTDVRRLDLESIVQFNNREVIVYLDESKKPP 1022
KER E G+C V+DFVVGRHGYGSIKF G TDV RLDLE +VQF NREV VY+DESKKPP
Sbjct: 965 KERVEQGYCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPP 997
Query: 1023 VGQGLNKPAEVTLLNIKCFNKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSHDTVKGE 1061
VGQGLNKPA VTLLNIKC +KKTG Q EG +++KYKE+L++K QGA+FVS+D V GE
Sbjct: 1025 VGQGLNKPAVVTLLNIKCMDKKTGTQVMEGERLDKYKEMLKRKAGEQGAQFVSYDPVNGE 997
BLAST of Sed0006864 vs. TAIR 10
Match:
AT1G80680.1 (SUPPRESSOR OF AUXIN RESISTANCE 3 )
HSP 1 Score: 150.6 bits (379), Expect = 7.1e-36
Identity = 81/170 (47.65%), Postives = 104/170 (61.18%), Query Frame = 0
Query: 889 AIVYEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCCHVQDFVVGRHGYGSIKF 948
A + EH +I +P L DY+ +P I EL +E P +C V DF +GR GYG I+F
Sbjct: 33 AALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDFTIGRIGYGYIRF 92
Query: 949 FGGTDVRRLDLESIVQFNNREVIVYLDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGHQY 1008
G TDVRRLDL+ IV+F+ EVIVY DES KP VG+GLNK AEVTL+ + + G Q
Sbjct: 93 LGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLV-VNIPDLTWGKQ- 152
Query: 1009 TEGPKVEKYKELLRKKTEAQGAEFVSHDTVKGEWKFRVDHFSRYNMEDNE 1059
+V L++ TE QGA F+S D G WKF V HFSR+ + D+E
Sbjct: 153 ----QVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDE 196
BLAST of Sed0006864 vs. TAIR 10
Match:
AT2G45000.1 (structural constituent of nuclear pore )
HSP 1 Score: 64.7 bits (156), Expect = 5.1e-10
Identity = 184/571 (32.22%), Postives = 279/571 (48.86%), Query Frame = 0
Query: 98 FGSSSSSLFGAFGSTNQQSQPAIGSTNQQSQPAFGSTNQQSQPAFGSNVFSSSSPFGATS 157
FG S+S +FGS++ + + ST +F ++ S FG SS+P +T+
Sbjct: 6 FGQSNSVGGFSFGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGFGSSVSSTPASSTT 65
Query: 158 QS-AFGASSTIAFG----ATSNTPAFG-ATSAPAFGATSTPVFGTTSTPAFGTTSTPVFG 217
S FGASST +FG A+S+TP+FG +SA A++TP FG FGT ++
Sbjct: 66 PSFGFGASSTPSFGFGSSASSSTPSFGFGSSASVTPASTTPSFG------FGTAASS--S 125
Query: 218 VTSTSAFGSTTTPAFGPTT-TSAFGSTGNAFGSLSTPGFGSGGGFGASSTSAFGVSSTPF 277
+ S FGS+TT A +S FG ++ S +TP S FGA ++SA SS+PF
Sbjct: 126 APAPSLFGSSTTNASSAAPGSSPFGFVTSSASSTATP---SSSLFGAPASSAATPSSSPF 185
Query: 278 GAPSASAFGP--SSTPSFNFGSTSALGQSTSAFGSNTS--TNTSP-FGAQSSPFGTQSAT 337
GA AS P S+PS +SA ++S FG+++S T+TSP FGA SS G +
Sbjct: 186 GAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSSAATSTSPLFGAPSSATGATPSF 245
Query: 338 TFTTSSLGQTS--FG--GQRGGSRVAPFAPTPEPDAAGANTTSKFQSMSAIPNYKDKSHE 397
+ +S+ G +S FG G VA A P GA +S F S+
Sbjct: 246 SVASSAPGSSSSIFGATGSSPSFSVASSASGSSPSIFGATGSSPFFGSSS---------- 305
Query: 398 ELRWEDYQLGDKGGPLPAGHSTVGVGFGVSTSQPNLQASSTFSQSNSNPFSTAVSTNPPK 457
G P+ ++ G +TS P+ STF+ S+++ S A ++
Sbjct: 306 -----------SAGSTPSLFAS--SSSGATTSSPSPFGVSTFNSSSTSNTSNASASPFSA 365
Query: 458 SSGFGIF---GPSTTFSSNSSAPAPSI-STNLFSMPSSASNPF-ASTTPASYPFASTTPA 517
S+GF STT S+ SAP + S++ FS +SA++ F ST ++ P +ST+ A
Sbjct: 366 STGFSFLKSTASSTTSSTTPSAPPQTASSSSSFSFGTSANSGFNLSTGSSAAPASSTSGA 425
Query: 518 --SNPFASTTPASNPFASTTPASNPFASTTPASNPFASTTPASN--PFASTGPASTSSFP 577
S +TT +S P A++ PAS+ AST A F T+ A+N P +S ST+ F
Sbjct: 426 VFSIATTTTTSSSTPAATSAPASSAPASTM-AFPSFGVTSSATNTTPASSAATFSTTGFG 485
Query: 578 -SSTTPQLGNSSLFS----------LSNAQPFASQPAISSTTSLGTNPTFPSNLNSNNTQ 633
+S+TP G+++ F+ S++QP + PA S + T+ T P+ ++ TQ
Sbjct: 486 LASSTPATGSTNSFTGFAVPKTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATSSATTTQ 537
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7035533.1 | 0.0e+00 | 72.97 | Nuclear pore complex protein NUP98A [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022958352.1 | 0.0e+00 | 72.70 | nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita moschata] | [more] |
| XP_023534368.1 | 0.0e+00 | 72.86 | nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022995534.1 | 0.0e+00 | 72.61 | nuclear pore complex protein NUP98A-like isoform X1 [Cucurbita maxima] | [more] |
| KAG6605623.1 | 0.0e+00 | 72.86 | Nuclear pore complex protein NUP98A, partial [Cucurbita argyrosperma subsp. soro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8RY25 | 6.3e-239 | 52.01 | Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana OX=3702 GN=NUP98A PE... | [more] |
| F4ID16 | 5.2e-217 | 49.41 | Nuclear pore complex protein NUP98B OS=Arabidopsis thaliana OX=3702 GN=NUP98B PE... | [more] |
| Q9VCH5 | 8.0e-24 | 26.74 | Nuclear pore complex protein Nup98-Nup96 OS=Drosophila melanogaster OX=7227 GN=N... | [more] |
| Q9UTK4 | 1.0e-23 | 28.02 | Nucleoporin nup189 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284... | [more] |
| Q6PFD9 | 1.4e-23 | 28.17 | Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1H1L4 | 0.0e+00 | 72.70 | nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita moschata OX=366... | [more] |
| A0A6J1K642 | 0.0e+00 | 72.61 | nuclear pore complex protein NUP98A-like isoform X1 OS=Cucurbita maxima OX=3661 ... | [more] |
| A0A6J1H2W1 | 0.0e+00 | 72.17 | nuclear pore complex protein NUP98A-like isoform X2 OS=Cucurbita moschata OX=366... | [more] |
| A0A6J1H4V4 | 0.0e+00 | 72.08 | nuclear pore complex protein NUP98A-like isoform X3 OS=Cucurbita moschata OX=366... | [more] |
| A0A6J1K485 | 0.0e+00 | 72.08 | nuclear pore complex protein NUP98A-like isoform X2 OS=Cucurbita maxima OX=3661 ... | [more] |
