Sed0006830 (gene) Chayote v1

Overview


Name	Sed0006830
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein RTE1-HOMOLOG
Location	LG07: 14501188 .. 14504019 (-)
RNA-Seq Expression	Sed0006830
Synteny	Sed0006830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGACGTCGTTTTAAAAAAAATAATGAATATAAACAAAACAATTTCGAAACCCTCGATTTTGATCTACGATTCTTAGCTCGTTGAGACGATCTTTCTTCACCAAATTTGTTCTGATAGGTAATTTCCATTCAATCTCTTCTCTGAAAATCCTGTTTTGTATTTCAATTTCTTCGTGTAGTTTGCTTGTATTACCAGTTTGATTTTTCGATTTGTGCACTTGGTGTTTGGCTATTCCGAAAGTTGACGATATTTGGGAGTTTCATCCTTGTTCCTATTTCTGATTGATTATTGCTTCCGGGTTTTTTATGGTTGATGGATTTCCTTTGATTTTGCTTTTTCAATTGCTTTTTTTCATAGTATAAAAGAATCTACTGGTCAATGGGTGCTTGCATTTCTAGCCTATGGCTGATTCCCTGTTAATTACTGGAAAGCTGCAACTCAAGTTAGTCGTGAAATGAGTTGATGAAACGAACCCTAATTTTGATTCTTCATACATTGTGACCTTTTCTTTCTTCTTTAGTGATGATCCCACAGAAATAAGAGGATTGGATGAAATTGAGGGAACAAAATTGGGATTGTTAAGTTTATGTTAATTTTTCCTTGAAGCTCTGTTGAATTGAGGTTTTCTTTCATTTCATTTCATTTCAGGAAGCATCTTATGACTCTGGAAATGGAATTAAGTAAGGACCCTGAGAATCAGATGATGAATGAAGCAAATATTGCTCAAAATATGAAAATTGATCCCGAGAGGGCTCGGTTTCCGTGTTGTATTGTGTGGACGCCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCATATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGCCCTAATTTTGTGTGCGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAATAGCGAGAAGGTACATGCCAATTTCCATTTGTGAACTAAAGACCAATCCCTTACATCATATTTCCCTAAATTTCGCTATATTGATAGGAACCTTACCATTATGGTTTAGTCTAGTGGTCAAGAGGATTATTGATAGGAACTTAACTATTATGGGTAATCTAGTGGTCAAGAGAACCTTGGATGGCTAAAAGGTCATGAGTTCAATCCATACTGATCACTTAAGAACTAATTTCTTACCGATTTTCTTGACAACTAAATGTCGTAGGGTCCAGCGGTTGTCTCATAAGAATAGTCAAGGTGCACGTAAGCTTGCCCTAAAACCATTCCTTTTGAAGTTTAGGTATATTGTTTGGGGAAAAAAAATATTTGTAAAGAATGAGCCAAAAGGATTGAAAACCGAAAACCTCTCTCTAAACCTCCTCGGTCAAATAACTCTCCCCAACCCTAGTTTTTTTTTTATATATATAAACATTTCATCCTTTTCCTTCGATGGTGCATCTCACTAGTACCAGAGGGGGACCCTCGACTGTGCACAACTCACCAACTAACCACACTTTGTCGACATCCTGCCCTCTTTCGATAGAGTGTGAGAGATCTCTAATTCTCCATAGTTCATGAGTTTCATATTGCATTGGAGTGAGCGACTCTGCTCACCTAGTGTTTTAAAAAGCCCCAAAAAAGCCTCGAAAGGCCCGAGGTGCACTCCTTGGGCTTGCCTCGTAAAAGTCCAGCCCAGTTAATAAAGCGTGCCTTGTTCGCGCTTTTCAGGGGTTTTTTGTGAAGCCCTCAAGCGCCAAAGGCGCAGGCCTTGAGGGGCTTCCTTATTCTTTTTCAATTTTCAAAATTTTCAAAATGACATCGTTTACTTTGTTTTTATTTTTTTAACCAGTTTAAAATGACACCGTTTCATTTTTAACTTCTTTTTTAAAAAAAAAAAAAAAACTTAAATGTCTCTTCTTCCCATGGAAGATTTGTTTCGCCATGATTACGAACAAAATCATGCCACAATTCTTTGATTTCGTTTTCTTACAAAACTTGAAACTCTTGCCTCTTTTTATCCTACAATATTCGGGCCTTGTATTTTACGGATTTTGTCTTATGTATTTTGCTCTTTGATTGACACCTATCATTATTTCGATGTGTTTGTAATACTTTCACTTTATCACCGTAAATGTTTTTTTTCTGATTTTTTTGAAACCTCTTTCCCTTTGAATTTTTTTGGCCCATTCCTTACAGTTTTGATTGTAATCGACATGCAGTGTTGCACTTCCACTCGTAAAAATGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCAAATAATCTGAACAGACTTGGATTTCGCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATCTTTATTAAGGGTCGGTGGGTCGGTAAAGGAGCTTTGATCCGCACATTCTTACCATTTGTTGTGATACTTAGTATAGGACTTGCACTAGGGGGTACTACATTCCTAACCTTCTTGGCATTCTTCAATTGCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAATTTTCTACATTTTTACAGATTGGATACTGTGAATTAAATGAAGGTAGATTGATTTTCCTTGTTGCAACTGTCCTAATCTTTGTAATTGTGCTCTTTATATGTTGTATGATACACGTAGAAGGGACACTCTCGCAACCCTGGCTACTAGCAACCTGTTCTTAACGTTCATGAATTGTTGATCAGATAAGTGATAATGGTATGGCAAAATATCTTAACAATTCGACTTGAA

mRNA sequence

AAACGACGTCGTTTTAAAAAAAATAATGAATATAAACAAAACAATTTCGAAACCCTCGATTTTGATCTACGATTCTTAGCTCGTTGAGACGATCTTTCTTCACCAAATTTGTTCTGATAGGAAGCATCTTATGACTCTGGAAATGGAATTAAGTAAGGACCCTGAGAATCAGATGATGAATGAAGCAAATATTGCTCAAAATATGAAAATTGATCCCGAGAGGGCTCGGTTTCCGTGTTGTATTGTGTGGACGCCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCATATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGCCCTAATTTTGTGTGCGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAATAGCGAGAAGTGTTGCACTTCCACTCGTAAAAATGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCAAATAATCTGAACAGACTTGGATTTCGCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATCTTTATTAAGGGTCGGTGGGTCGGTAAAGGAGCTTTGATCCGCACATTCTTACCATTTGTTGTGATACTTAGTATAGGACTTGCACTAGGGGGTACTACATTCCTAACCTTCTTGGCATTCTTCAATTGCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAATTTTCTACATTTTTACAGATTGGATACTGTGAATTAAATGAAGGTAGATTGATTTTCCTTGTTGCAACTGTCCTAATCTTTGTAATTGTGCTCTTTATATGTTGTATGATACACGTAGAAGGGACACTCTCGCAACCCTGGCTACTAGCAACCTGTTCTTAACGTTCATGAATTGTTGATCAGATAAGTGATAATGGTATGGCAAAATATCTTAACAATTCGACTTGAA

Coding sequence (CDS)

ATGACTCTGGAAATGGAATTAAGTAAGGACCCTGAGAATCAGATGATGAATGAAGCAAATATTGCTCAAAATATGAAAATTGATCCCGAGAGGGCTCGGTTTCCGTGTTGTATTGTGTGGACGCCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCATATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGCCCTAATTTTGTGTGCGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAATAGCGAGAAGTGTTGCACTTCCACTCGTAAAAATGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCAAATAATCTGAACAGACTTGGATTTCGCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATCTTTATTAAGGGTCGGTGGGTCGGTAAAGGAGCTTTGATCCGCACATTCTTACCATTTGTTGTGATACTTAGTATAGGACTTGCACTAGGGGGTACTACATTCCTAACCTTCTTGGCATTCTTCAATTGCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL

Homology

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BLAST of Sed0006830 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 7.0e-116
Identity = 206/230 (89.57%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           M+LEME SKDPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCC S  ++E+E REVDH REISTWDD
Sbjct: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGAL 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KGA+
Sbjct: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187

Query: 181 IRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVV+ SIGLALG TTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237

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BLAST of Sed0006830 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 7.0e-116
Identity = 206/230 (89.57%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           M+LEME SKDPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCC S  ++E+E REVDH REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGAL 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KGA+
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVV+ SIGLALG TTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

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BLAST of Sed0006830 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 421.4 bits (1082), Expect = 5.0e-114
Identity = 201/226 (88.94%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 5   MELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           ME S DPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCC ST ++E+E REVDHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGALIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR GGWNVVNLAALIF+KGRWV KGA+IRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           LPFVV+ +IGLA+GGTTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

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BLAST of Sed0006830 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114
Identity = 201/226 (88.94%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 5   MELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           ME + DPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN EKCC ST ++EDE RE DHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGALIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIF+KGRWV  GA+IRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           LPFVV+ SIGLALGGTTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

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BLAST of Sed0006830 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 202/230 (87.83%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           M+LEME +KDPENQ+M E NIAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCC S  ++E+E REVD  REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGAL 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KGA+
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVV+ SIGLALG TTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

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BLAST of Sed0006830 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-75
Identity = 140/232 (60.34%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 6   ELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E + D E++MM    ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMM--IGLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINSE----KCCTSTRKNED---EFREVDHGREISTW 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E    +  +S   N +   E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 126 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 185
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 186 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A++++ LP +++ +IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

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BLAST of Sed0006830 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 0


Query: 17  NEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCV 76
           +EA++    +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ V
Sbjct: 34  DEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINV 93

Query: 77  DNFTFGAVARYLQINSEKCCTSTRKN----EDEFREVDHGREISTWDDALRRSTQEFQHR 136
           D+F FG  ARYLQ++  KCC          +  F+  D G    TWD+AL  ST+ F+H+
Sbjct: 94  DDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHK 153

Query: 137 AYNLLTCNCHSFVANNLNRLGFRTGG---WNVVNLAALIFIKGRWVGKGALIRTFLPFVV 196
            YN+ TCNCHSFVAN LNRL +  GG   WN+VN+A L+ IKG+W+   +++R+FLP  V
Sbjct: 154 TYNIFTCNCHSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAV 213

Query: 197 ILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLV 229
           + S+G+ L G  FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 214 VTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

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BLAST of Sed0006830 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 146
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFIKGRWVGKGALIRTFLPFVVILSIGLAL 198
             LN + +     WN+V L     + G++V  GA ++T+LPF+++L I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

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BLAST of Sed0006830 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 146
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFIKGRWVGKGALIRTFLPFVVILSIGLAL 198
             LN + +     WN+V L     I G++V  GA ++T+LPFV++L I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

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BLAST of Sed0006830 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.4e-116
Identity = 206/230 (89.57%), Postives = 216/230 (93.91%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           M+LEME SKDPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCC S  ++E+E REVDH REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGAL 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KGA+
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVV+ SIGLALG TTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Sed0006830 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.1e-114
Identity = 201/226 (88.94%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 5   MELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           ME + DPENQ+M E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN EKCC ST ++EDE RE DHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGALIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIF+KGRWV  GA+IRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           LPFVV+ SIGLALGGTTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of Sed0006830 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114
Identity = 202/230 (87.83%), Postives = 215/230 (93.48%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           M+LEME +KDPENQ+M E NIAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCCTSTRKNEDEFREVDHGREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCC S  ++E+E REVD  REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKGAL 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KGA+
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVV+ SIGLALG TTFLTFLAFF  FLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Sed0006830 vs. ExPASy TrEMBL
Match: A0A6J1JA62 (protein RTE1-HOMOLOG OS=Cucurbita maxima OX=3661 GN=LOC111482655 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.1e-112
Identity = 205/232 (88.36%), Postives = 212/232 (91.38%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MTLEME S DPENQMM E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MTLEMESSNDPENQMMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCC--TSTRKNEDEFREVDHGREISTW 120
           EDGVILDFAGPNFVCVDNFTFGAV RYLQINS+KCC   + R  EDEFRE     EISTW
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVVRYLQINSDKCCCIVTRRSEEDEFRE----GEISTW 120

Query: 121 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 180
           DDALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KG
Sbjct: 121 DDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 180

Query: 181 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A+IRT LPFVV+ SIGLALGGTTFLTFLAFFN FLVGWFILGTYVFKNLVQL
Sbjct: 181 AVIRTLLPFVVVFSIGLALGGTTFLTFLAFFNVFLVGWFILGTYVFKNLVQL 228

[Close]

BLAST of Sed0006830 vs. ExPASy TrEMBL
Match: A0A6J1ENB6 (protein RTE1-HOMOLOG isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436054 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 204/232 (87.93%), Postives = 213/232 (91.81%), Query Frame = 0


Query: 1   MTLEMELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MTLEME S DPENQMM E NIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MTLEMESSNDPENQMMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSEKCC--TSTRKNEDEFREVDHGREISTW 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQI+S+KCC   + R  EDEFR+     EISTW
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQISSDKCCCIVTRRSEEDEFRD----GEISTW 120

Query: 121 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 180
           DDALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIF+KGRWV KG
Sbjct: 121 DDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 180

Query: 181 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A+IRT LPFVV+ SIGLALGGTTFLTFLAFFN FLVGWFILGTYVFKNLVQL
Sbjct: 181 AVIRTLLPFVVVFSIGLALGGTTFLTFLAFFNVFLVGWFILGTYVFKNLVQL 228

[Close]

BLAST of Sed0006830 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76
Identity = 140/232 (60.34%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 6   ELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E + D E++MM    ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMM--IGLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINSE----KCCTSTRKNED---EFREVDHGREISTW 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E    +  +S   N +   E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 126 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 185
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 186 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A++++ LP +++ +IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Sed0006830 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76
Identity = 140/232 (60.34%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 6   ELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E + D E++MM    ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMM--IGLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINSE----KCCTSTRKNED---EFREVDHGREISTW 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E    +  +S   N +   E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 126 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 185
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 186 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A++++ LP +++ +IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Sed0006830 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76
Identity = 140/232 (60.34%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 6   ELSKDPENQMMNEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E + D E++MM    ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMM--IGLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINSE----KCCTSTRKNED---EFREVDHGREISTW 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E    +  +S   N +   E  E  H +E  TW
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKE-PTW 122

Query: 126 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFIKGRWVGKG 185
           DDALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV K 
Sbjct: 123 DDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKT 182

Query: 186 ALIRTFLPFVVILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLVQL 231
           A++++ LP +++ +IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 AIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Sed0006830 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 0


Query: 17  NEANIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCV 76
           +EA++    +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ V
Sbjct: 34  DEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINV 93

Query: 77  DNFTFGAVARYLQINSEKCCTSTRKN----EDEFREVDHGREISTWDDALRRSTQEFQHR 136
           D+F FG  ARYLQ++  KCC          +  F+  D G    TWD+AL  ST+ F+H+
Sbjct: 94  DDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHK 153

Query: 137 AYNLLTCNCHSFVANNLNRLGFRTGG---WNVVNLAALIFIKGRWVGKGALIRTFLPFVV 196
            YN+ TCNCHSFVAN LNRL +  GG   WN+VN+A L+ IKG+W+   +++R+FLP  V
Sbjct: 154 TYNIFTCNCHSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAV 213

Query: 197 ILSIGLALGGTTFLTFLAFFNCFLVGWFILGTYVFKNLV 229
           + S+G+ L G  FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 214 VTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

The following BLAST results are available for this feature:

BLAST of Sed0006830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	7.0e-116	89.57	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	7.0e-116	89.57	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
XP_038884143.1	5.0e-114	88.94	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_022136620.1	8.6e-114	88.94	protein RTE1-HOMOLOG [Momordica charantia]	[more]
XP_008452120.1	1.1e-113	87.83	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei...	[more]

BLAST of Sed0006830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	1.6e-75	60.34	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	1.6e-59	52.05	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9H0R3	1.9e-31	39.53	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]
Q8BVA2	2.5e-31	40.12	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]

BLAST of Sed0006830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	3.4e-116	89.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A6J1C4G0	4.1e-114	88.94	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A1S4DZL7	5.4e-114	87.83	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1JA62	5.1e-112	88.36	protein RTE1-HOMOLOG OS=Cucurbita maxima OX=3661 GN=LOC111482655 PE=4 SV=1	[more]
A0A6J1ENB6	1.5e-111	87.93	protein RTE1-HOMOLOG isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436054 PE...	[more]

BLAST of Sed0006830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	1.2e-76	60.34	RTE1-homolog	[more]
AT3G51040.2	1.2e-76	60.34	RTE1-homolog	[more]
AT3G51040.3	1.2e-76	60.34	RTE1-homolog	[more]
AT2G26070.1	1.2e-60	52.05	Protein of unknown function (DUF778)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 100..174 e-value: 2.3E-19 score: 70.5 coord: 43..96 e-value: 4.5E-21 score: 76.1
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 4..230
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 4..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006830.1	Sed0006830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane