Sed0006827 (gene) Chayote v1

Overview


Name	Sed0006827
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Exo-poly-alpha-D-galacturonosidase
Location	LG12: 8855756 .. 8861119 (-)
RNA-Seq Expression	Sed0006827
Synteny	Sed0006827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCACTAGAAGGCCAAAAGATGATCTACAATTACATCGGTTAGGCTCACAATTTTGTGTTCATTTCCACTATTTTTACTAGACAATTGTCCAAATCTATTATATTGTTAAGGTAACTTGTTGGAGGAACAAGTCACCATGGTCAAACTTTTGACCGCCAACAAAAATTCAAAGTTCTGGTCTAGGGATGAGCGTGGTTACGCTTGTTTCGAAAAAAAGAAAAAAAAAACATTCGAAGTTCAAATTTGGTTGTATTTTTTAGTGGGATTTAATTCACCAACAAAATGAAATTGTGTGCAGCTTGCATCTTGTTCGATGTGAGAACACAGTCATTGAAGATGTTTCCATTTATGGAGATTTCAATACACCCAACAACGATGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATTGACACTGGGGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTTTTCAACTTAACTGCCACTGACTGCTGGATTGGAACTAAATCCTCTGCTATTAAGCTGGGTAGTGCCAGTTGGTTCAATTTCACCCGATTGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTCGGGTTCCAGCTGATGGCGGTAAGTTCTTGCTTCCCTTTTTAGTTGCTATGCTGAAACGTGTGATATTTGAAGCCATTTTAGATAACAGCATTCTGCTTTTTAGATCAAGATTTTGAGATTATTTCAGCGAGTTGGAAAACAAACGAAAGTTGTCTGTTTTTTTTTTTTTTTGTAATTGAGTGTTCGGGTCAGTTTACGCACACCTCGACTATTTTCATGAGATAGTCATATGACCTTACAACACTTAATTCTCAAGAAAATCCGTAGGTGGTCACCAATAATATCATAGATTGAAACCTTAGTCTCCAAGTTCCTCGTTGCCTTCTTGACCACTCGGTCAATTTGGAAAGTTGTGTAAAAAGTGAAAACAAAAACTATGGATATCTTCGAATAATATATGTAATTTCAATGAATAGTGATGATTTTTTGTAAGACGATCATTTTTGTTCAAAACCCATTGAATTGTGCAGTAGCTTTATTGGTATAAGTTTTGGTTTTTCTTTCCACTTTGAGTTGGATTGTAAAGTTAAATTTGACTCATGGATAAGGTTTTTTAATTTTATGTTTCAAAATAAAGTTTATATCTGGTTATTGAGCTTATCCTAGATTATAGATTGGTTGATTTCACATGCTACATGTTGAAGTTTGAGTTTTTTCTTTAATTAATTTTCAGTTTTTATTTAAGGTTTAAGTTTCTTTATATTTTAATTTTCAGTTTTTATTTAAGGTTTAAGTTTCTTTATATTTAATATTGATTAAGTTTTTGTTTTAAGTTTTTTTGATTTTATAACTCTATTGGAGTTATCTCTTTTAAGTTTTATTATGTTTTGTTTTTAAATGTTGTAAGTTATAGGCATTAATTAACTTCAACTTTTATACCTATATAAGGATGAACAATCCTTGAGAAAGTTTGTAACACCAATAACATACTTTTTTGGTACTACAATTGTGAAACCACATTTGAGTACACATATTTTGTGTTACAATTTTATAACAACATTTGTGTATCACCAATTTCCCCATTTCTATAGAAACATATTCATATTTGTTTCACTCTCACATTTTCTCTCTTTGTTCAACAAACATTGAGACTTTGATTTAACTTTTGCTTCCGCAATATTTCATTTCATATTCCATTTTTTTTTCCCAACAGTGGTATCAGAGCCTTAGATTTAAAGTCCTGTGATTTTATTTGAGAGTGAAATTTTTATTTTTTGTAATTGAATATGTCTTCAAATTTTGGTGTCACCTCTCCTCCACATTTTAGTGGTGAAAATTACCAATTTTGGGTTGTTAAAATGCAATCCTATCTCAAAGCCCTCGGCCTTTGGGAATGCGTTTCTACTGATGCTGATCCTCAACCATTAGGAGAAAATCCGACGTTGAATCATATCAGATTACATGAAGAGGAGAAATTGAAGAAGCCCAAAGCTCTATCTGTGATTCATGCCGCTTTATCAGATCCTATATTTGCTAGGATTATTGATTGTAAAACGGCAAAAGAAGCTTGGGATAAATTGCAAGAGGAATTTGAAGGTAGTGCAAGGGTGAAGGCTATCAAATTATTGACTCTCAAAAGAGAGTTTGAAATGCTAAAAATGAAGGATTCAGATTCTGTAAGGGCTACACAACAAAAGTGATGACAATTGTAAACCGAGATAAGACTTTTTGGTGAAACTTTTCTTGATCAAAGAGTTGTGGAAAAATAATGGTCGGTGTTCCTAGCAAATTTGAGTCAAAGATCTCAAAGAATAGAAGAGTCTTGATTTGACTACTCTTACCATTTCTCGAATTAATTAGCAAATTGCAAGCCCATGAGCAAAGGGATACAATACGTAATGAGGAGCATGTTGAGGGAGCATTTCATGCCATGTTTAAAAGTAATAAACTTGTTGCAGAAGATGGTAGACAAATAACCAAAGGTCAAGAAAGTAAGGAGAAAGGAGGAGCATCAGAAAAAACAAAATTTCCTCCATGTCGCTTTTGTAAAAGGACCAACCATGATGAAAAAAATTGTTGGTTCAAGAACAAACGATTCTACCACTGTGATTATTGCAACAAGGATGGGCATCTGAGAAAAGTTTTGTTATGCCAAACAAAACCAAACAAAAACCTCCAACAACAAGCAAATTGTGCAGTAAGACAATGAAGAAACAAACTTTTTATTTATGGCTTCTCATGTCGAGAGACAACAAGTCAACCTCTTGGCTTATTGTGGTGGATGCACTACCCATATGGCTAAAGATATCAATCTTTTTAGCCAAATTGACCGATCTATACAGTCCAAGGTGATTCTTGGACATGGTGAGACAAATACCAGAGAGAAGGCAAAGGTCTGTCATAATGAATACCAAACAAGGTGAACATAAAATATCTAATATTTTATATGTTCCAAGATTATCTCAAAACTTGCTTAGTATTGCTCAATTGTTGCATAATAATTTTTCTGTGGCATTTAAAGATCAAGTTTGTGTCATTCATGACCCTCAAGGAGTAGAGATCGCAAGGGTCAAAATGGTTGATAATGCCTTCATTTTAAATGGTGACTCGATAAGTCATCATGCACTAAACATCAAGTAGAAGAAAACAAAAGGTGGCATCATCATCTTGGTCACTACAATAACAAGGTTTTGAAATCCTTGAATTCTTCTAATAAGGTTGATGATTTTTCCAATTTTATCTCATTTGGTCAAATTTATGAAAGTTGCCTAGAATGGAAGATGCATAGATTACCTTTTTTAAAAGGTGGTAATTTTAGAGCCAACGACAAGCTTAAATTGGTTCACAATGAAGTTTGTGGTTCCATTTGCAACACATTTATTGGGAATAAATATTTTATTCCATTTATTGATTATTTTACCAAGATGACTTGGGAGTATTTTTTGATTGAGAGAACTCAAGTTTATGGTATTTTCAAGAAACTTGTGAATCTAGTTGGCATTAAGAATGCTTTCAAGATCAAAGCCTTGGGAATGACAAGTGATTTGAATTTGATTGGATGTGCTGATATCAATTGGACAGATTTAATTGATGGTTTTAAATTAAACGTTTCGACGTATGTTTCTTCTTTTGGAATTTCAAGAAGTCAAGAGCTTGTGGTTAGATTTATCGTTGAAATTGGATACGTTGTTTTTGCACAAGCTGCAAATCAAGCGATATGGATTTATAAATTGTTTGATAATTTTGGATGTGTACTAGAAGGACACACAAAAAGATTCTGTGATAAGAAATTTGTTGGTGCCTTTCATCAAATTCAACTTGGTAGACCAAAGCACATCCAAGTCAAAAATTTGTTTGTTGAAAGTCGAGAAAGAAAGAGAAAGAAGGCAAAATCAAACTTAATTGTTTGTTGTTATGAAGAGCACTTGCTGACATTCTCACAAAAGATTTGTCATTGACCAAATTTATGTTTCAACCTCAGAAGTCCAACGTCACAAAGAAAAACCTCAAGGAGGAGTGTTGAAGTTTGAGTTTTTTCTTTGATTAATTTTCAGTTTTTATTTAAGGTTTAAGTTTCTTTATATTTAATATTGATTAAGTTTTTGTTTTAAGTTTTTTGATTTTATAACTCTATTGGAGTTATCTCTTTTAAGTTTTATTATGTTTTGTTTTTAAATGTTGTAAGTTATAGGCATTAATTAACTTCAACTTTTATACCTATATAAGGATGAACAATCCTTGAGAAAGTTTGTAACACCAATAACATACTTTTTTGGTACTACAATTGTGAAACCACATTTGAGTACACATATTTTGTGATACAATTTTATAACAACATTTGTGTATCACCAATTTCCCTATTTCTATAGAAACATATTCATATTTGTTTCACTCTCACATTTTCTCTCTTTGTTCAACAAACATTGAGACTTTGATTTAACTTTTGCTTCCGCAATATTTCATTTCATATTCCATTTTTTTTTTCCCAACACTACATCTATTCCAATTACACTAAGTTCCAGAAAAATGAAACCTATTCTATTCTTCAACCTGAGGAAAATCTCAACTAGTTAAAACATATCTTCAACCAAAAGGTCGGAGGCTTGAATCTCCACTCTTTTCGAGGTGATGAGTTCGATCTGTGATGGTTAACCAAGCTAAGAATTATTTTATGAGTTTTCTTGACAACCAAATGTTGTAGGGTCAAACGACTCTCCTGTAAAAATAATCAAGGTACGCATAAGCTGACACGAACACTCATGTATTTATGAAAGAAAAGACTTTTTGACCTCATGTTTCTGAAATTCAATGTGCTAGTTCAACCTGAAAACTGGTGAGAGATTAATTTCCAGCCTTAAAGCTTTAAGAACCATATAATGCAATTCTCTGTTCCATATTCTCTTCTGCAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAACTAATTTACGTTACGACTTGCCCCAGAGATCCAGGCTCGAAGGAGGGTTCGATCTCAAACATAAACATCACGGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGGGTTCTGAGTAATCTGAGATTCACCAATGTGAAGCTGAGCTACAAAAGATGGACAAAATATGGTGGTGGTTTAGCAGACTACAGGCCAGGATGCCAAGGCTTTGTTAAGCATGGAATGGCAGGGATGATAATTAATTGAGCATATTGAAGGTTTGAGTTTTGAAAATGTTGACATGAAATGGTCTGATAATGTATCTTTACAGTGGAATAATCCAATGGACTTTCATTCAGGTTATTTAAGAGAATGA

mRNA sequence

ATGGTCACTAGAAGGCCAAAAGATGATCTACAATTACATCGCTTGCATCTTGTTCGATGTGAGAACACAGTCATTGAAGATGTTTCCATTTATGGAGATTTCAATACACCCAACAACGATGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATTGACACTGGGGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTTTTCAACTTAACTGCCACTGACTGCTGGATTGGAACTAAATCCTCTGCTATTAAGCTGGGTAGTGCCAGTTGGTTCAATTTCACCCGATTGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTCGGGTTCCAGCTGATGGCGGTAAATCCAGGCTCGAAGGAGGGTTCGATCTCAAACATAAACATCACGGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGGGTTCTGAGTAATCTGAGATTCACCAATGTGAAGCTGAGCTACAAAAGATGGACAAAATATGGTGGTGGTTTAGCAGACTACAGGCCAGGATGCCAAGGCTTTCATATTGAAGGTTTGAGTTTTGAAAATGTTGACATGAAATGGTCTGATAATGTATCTTTACAGTGGAATAATCCAATGGACTTTCATTCAGGTTATTTAAGAGAATGA

Coding sequence (CDS)

ATGGTCACTAGAAGGCCAAAAGATGATCTACAATTACATCGCTTGCATCTTGTTCGATGTGAGAACACAGTCATTGAAGATGTTTCCATTTATGGAGATTTCAATACACCCAACAACGATGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATTGACACTGGGGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTTTTCAACTTAACTGCCACTGACTGCTGGATTGGAACTAAATCCTCTGCTATTAAGCTGGGTAGTGCCAGTTGGTTCAATTTCACCCGATTGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTCGGGTTCCAGCTGATGGCGGTAAATCCAGGCTCGAAGGAGGGTTCGATCTCAAACATAAACATCACGGCAACCTCCGAAAACGGGGTTTTCTTGTCGGGATCGAAATCCGGGGTTCTGAGTAATCTGAGATTCACCAATGTGAAGCTGAGCTACAAAAGATGGACAAAATATGGTGGTGGTTTAGCAGACTACAGGCCAGGATGCCAAGGCTTTCATATTGAAGGTTTGAGTTTTGAAAATGTTGACATGAAATGGTCTGATAATGTATCTTTACAGTGGAATAATCCAATGGACTTTCATTCAGGTTATTTAAGAGAATGA

Protein sequence

MVTRRPKDDLQLHRLHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQLMAVNPGSKEGSISNINITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGFHIEGLSFENVDMKWSDNVSLQWNNPMDFHSGYLRE

Homology

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BLAST of Sed0006827 vs. NCBI nr
Match: XP_023538800.1 (uncharacterized protein LOC111799618 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.9 bits (938), Expect = 2.4e-97
Identity = 196/274 (71.53%), Postives = 205/274 (74.82%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF
Sbjct: 194 LHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 253

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 254 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 313

Query: 135 MAV-----------------------NPGSKEGSISN---INITATSENGVFLSGSKSGV 194
           M V                       +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 314 MNVSTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGV 373

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 374 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 433

[Close]

BLAST of Sed0006827 vs. NCBI nr
Match: KAG7027765.1 (Exo-poly-alpha-D-galacturonosidase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-97
Identity = 194/274 (70.80%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF
Sbjct: 195 LHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 254

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 255 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 314

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 315 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGV 374

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 375 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 434

[Close]

BLAST of Sed0006827 vs. NCBI nr
Match: XP_022931747.1 (uncharacterized protein LOC111437911 [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-97
Identity = 194/274 (70.80%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF
Sbjct: 194 LHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 253

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 254 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 313

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 314 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGV 373

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 374 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 433

[Close]

BLAST of Sed0006827 vs. NCBI nr
Match: KAG6596223.1 (Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.2 bits (936), Expect = 4.1e-97
Identity = 194/275 (70.55%), Postives = 203/275 (73.82%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF
Sbjct: 543 LHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 602

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 603 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 662

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 663 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGV 722

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 723 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 782

[Close]

BLAST of Sed0006827 vs. NCBI nr
Match: XP_022971216.1 (uncharacterized protein LOC111470006 [Cucurbita maxima])

HSP 1 Score: 361.3 bits (926), Expect = 6.0e-96
Identity = 192/274 (70.07%), Postives = 201/274 (73.36%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLV CENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPK SNGPVF
Sbjct: 195 LHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVF 254

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 255 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 314

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 315 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGV 374

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 375 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 434

[Close]

BLAST of Sed0006827 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGP 74
           +++ +C+N +I+DV++    ++PN DGI + DS+   IT   I  GDD I   P TS   
Sbjct: 187 MNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSK-- 246

Query: 75  VFNLTATDCWIGTKSSAIKLG 94
             N+T   C  G   S   LG
Sbjct: 247 -VNITGVTCGPGHGISIGSLG 264

[Close]

BLAST of Sed0006827 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04
Identity = 31/84 (36.90%), Postives = 41/84 (48.81%), Query Frame = 0


Query: 14  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNG 73
           + H+V     N  I+ V +  D N+PN DGI +E S++  IT  RI TGDD I     + 
Sbjct: 176 KFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGST 235

Query: 74  PVFNLTATDCWIGTKSSAIKLGSA 96
            VF +    C  G   S   LG A
Sbjct: 236 NVF-IQTIRCGPGHGISIGSLGRA 258

[Close]

BLAST of Sed0006827 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.5e-04
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGP 74
           +++ RC++ +I+DV++    ++PN DGI + DS+   IT   I  GDD I   P TS   
Sbjct: 187 MNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSK-- 246

Query: 75  VFNLTATDCWIGTKSSAIKLG 94
             N+T   C  G   S   LG
Sbjct: 247 -VNITGVTCGPGHGISIGSLG 264

[Close]

BLAST of Sed0006827 vs. ExPASy TrEMBL
Match: A0A6J1EUK0 (uncharacterized protein LOC111437911 OS=Cucurbita moschata OX=3662 GN=LOC111437911 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 194/274 (70.80%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF
Sbjct: 194 LHLVRCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 253

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 254 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 313

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 314 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNINFINITATSENGVFLSGSKSGV 373

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 374 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 433

[Close]

BLAST of Sed0006827 vs. ExPASy TrEMBL
Match: A0A6J1I2Q7 (uncharacterized protein LOC111470006 OS=Cucurbita maxima OX=3661 GN=LOC111470006 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 192/274 (70.07%), Postives = 201/274 (73.36%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLV CENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPK SNGPVF
Sbjct: 195 LHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVF 254

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 255 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 314

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 315 MNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGV 374

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWS- 224
           LSNLRF NVKL+YKRWTKYGGG+ADYRPGCQGF           HIEGLSFENVDMKWS 
Sbjct: 375 LSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSD 434

[Close]

BLAST of Sed0006827 vs. ExPASy TrEMBL
Match: A0A5A7TLI5 (Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00350 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.6e-94
Identity = 189/272 (69.49%), Postives = 198/272 (72.79%), Query Frame = 0


Query: 13  HRLHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGP 72
           H LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGP
Sbjct: 191 HCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGP 250

Query: 73  VFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL----------- 132
           VFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL           
Sbjct: 251 VFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITF 310

Query: 133 -------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKS 192
                                       +PGSKEGSISN   INITATSENGVFLSGSKS
Sbjct: 311 SNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKS 370

Query: 193 GVLSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKW 221
           GVLSNLRFTNVKL YKRWTKYGGG+ADYRPGCQGF           HIEGL+ ENVDM W
Sbjct: 371 GVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNW 430

[Close]

BLAST of Sed0006827 vs. ExPASy TrEMBL
Match: A0A5D3DP49 (Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005690 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.8e-93
Identity = 188/270 (69.63%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGPVF
Sbjct: 194 LHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGPVF 253

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 254 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 313

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 314 INITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKSGV 373

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWSD 221
           LSNLRFTNVKL YKRWTKYGGG+ADYRPGCQGF           HIEGL+ ENVDM WSD
Sbjct: 374 LSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNWSD 433

[Close]

BLAST of Sed0006827 vs. ExPASy TrEMBL
Match: A0A1S3B7Z6 (exo-poly-alpha-D-galacturonosidase OS=Cucumis melo OX=3656 GN=LOC103486792 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.8e-93
Identity = 188/270 (69.63%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGPVF
Sbjct: 194 LHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGPVF 253

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSHRGLGFQL             
Sbjct: 254 NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSN 313

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +PGSKEGSISN   INITATSENGVFLSGSKSGV
Sbjct: 314 INITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKSGV 373

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF-----------HIEGLSFENVDMKWSD 221
           LSNLRFTNVKL YKRWTKYGGG+ADYRPGCQGF           HIEGL+ ENVDM WSD
Sbjct: 374 LSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMNWSD 433

[Close]

BLAST of Sed0006827 vs. TAIR 10
Match: AT3G57790.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 6.9e-74
Identity = 141/255 (55.29%), Postives = 168/255 (65.88%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVF 74
           LH+VRCENT + DVSI GDFNTPNNDGIDIEDSNNT ITRC IDTGDDAICPKT  GP++
Sbjct: 199 LHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYTGPLY 258

Query: 75  NLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL------------- 134
           NLTATDCWI TKSSAIKLGSASWF+F  L+FDNITI +SHRGLG Q+             
Sbjct: 259 NLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDVTFSN 318

Query: 135 -----------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGV 194
                                     +  +KEGSISN   +NIT  SENGVFLSGS +G+
Sbjct: 319 INISTRYYDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDSENGVFLSGSPNGL 378

Query: 195 LSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGF------------HIEGLSFENVDMKWS 217
           LS+++F N+ L+++RW+ Y  GL DYRPGCQG             H+ G   ENVD+KWS
Sbjct: 379 LSDIKFKNMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHVNGFRVENVDLKWS 438

[Close]

BLAST of Sed0006827 vs. TAIR 10
Match: AT3G62110.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 50/199 (25.13%), Postives = 85/199 (42.71%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPK------- 74
           +H V C + V+++++I     +PN DG+D + S N  I  C I TGDD +  K       
Sbjct: 205 IHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYG 264

Query: 75  ------TSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQL 134
                 +S   +  LT       T SS I +GS      + +   ++ + +S+ G+  + 
Sbjct: 265 ISYARPSSKIKINRLTGQT----TSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKT 324

Query: 135 MAVNPGSKEGSISNINITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYGGGLAD- 194
            A     + G + N++I                   N++  NVK + +   KYG    + 
Sbjct: 325 SA----GRGGYVRNVHIL------------------NVKLDNVKKAIRFTGKYGEHPDEK 376

Query: 195 YRPGCQGFHIEGLSFENVD 200
           Y P      IE ++FENV+
Sbjct: 385 YDPKALP-AIEKITFENVN 376

[Close]

BLAST of Sed0006827 vs. TAIR 10
Match: AT4G33440.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 39/131 (29.77%), Postives = 59/131 (45.04%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS----- 74
           +H V C N VI +++I    N PN DGID + S N  I  C I++GDD +  K+      
Sbjct: 234 IHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYG 293

Query: 75  ---NGPVFNLTATDCWIGTKS-SAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQLMAVN 134
                P  N+        T++ S + +GS        +  ++I + DS  GL  +     
Sbjct: 294 MAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIK----T 353

Query: 135 PGSKEGSISNI 137
              + G ISNI
Sbjct: 354 DKGRGGYISNI 360

[Close]

BLAST of Sed0006827 vs. TAIR 10
Match: AT4G23820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.4e-07
Identity = 44/148 (29.73%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 15  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS----- 74
           +H V C N VI  V+I    ++PN DGID + S N  I    I TGDD +  K+      
Sbjct: 203 IHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYG 262

Query: 75  ---NGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSHRGLGFQLMAVNP 134
                P  N+T       +  + I +GS +      ++ ++IT+  S+ G+G  +   N 
Sbjct: 263 IAYGRPSSNITIRRITGSSPFAGIAIGSETSGGIKNIIAEHITL--SNMGVGVNI-KTNI 322

Query: 135 GSKEGSISNINIT----ATSENGVFLSG 151
           G + G I NI I+     T++ G+ ++G
Sbjct: 323 G-RGGYIKNIKISDVYVDTAKYGIKIAG 346

[Close]

BLAST of Sed0006827 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.2e-05
Identity = 31/84 (36.90%), Postives = 41/84 (48.81%), Query Frame = 0


Query: 14  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNG 73
           + H+V     N  I+ V +  D N+PN DGI +E S++  IT  RI TGDD I     + 
Sbjct: 176 KFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGST 235

Query: 74  PVFNLTATDCWIGTKSSAIKLGSA 96
            VF +    C  G   S   LG A
Sbjct: 236 NVF-IQTIRCGPGHGISIGSLGRA 258

The following BLAST results are available for this feature:

BLAST of Sed0006827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538800.1	2.4e-97	71.53	uncharacterized protein LOC111799618 [Cucurbita pepo subsp. pepo]	[more]
KAG7027765.1	3.2e-97	70.80	Exo-poly-alpha-D-galacturonosidase, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022931747.1	3.2e-97	70.80	uncharacterized protein LOC111437911 [Cucurbita moschata]	[more]
KAG6596223.1	4.1e-97	70.55	Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma ...	[more]
XP_022971216.1	6.0e-96	70.07	uncharacterized protein LOC111470006 [Cucurbita maxima]	[more]

BLAST of Sed0006827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35338	7.3e-04	35.80	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
O22818	7.3e-04	36.90	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
P26216	9.5e-04	35.80	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of Sed0006827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUK0	1.5e-97	70.80	uncharacterized protein LOC111437911 OS=Cucurbita moschata OX=3662 GN=LOC1114379...	[more]
A0A6J1I2Q7	2.9e-96	70.07	uncharacterized protein LOC111470006 OS=Cucurbita maxima OX=3661 GN=LOC111470006...	[more]
A0A5A7TLI5	4.6e-94	69.49	Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5D3DP49	1.8e-93	69.63	Exo-poly-alpha-D-galacturonosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B7Z6	1.8e-93	69.63	exo-poly-alpha-D-galacturonosidase OS=Cucumis melo OX=3656 GN=LOC103486792 PE=3 ...	[more]

BLAST of Sed0006827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57790.1	6.9e-74	55.29	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	2.5e-07	25.13	Pectin lyase-like superfamily protein	[more]
AT4G33440.1	9.4e-07	29.77	Pectin lyase-like superfamily protein	[more]
AT4G23820.1	9.4e-07	29.73	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	5.2e-05	36.90	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 151..192 e-value: 7100.0 score: 1.2 coord: 128..150 e-value: 700.0 score: 8.3 coord: 20..46 e-value: 71.0 score: 12.3 coord: 47..68 e-value: 1200.0 score: 6.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 11..139 e-value: 1.2E-9 score: 37.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 9..219 e-value: 6.7E-34 score: 119.4
None	No IPR available	PANTHER	PTHR31339:SF0	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 14..121 coord: 125..219
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 125..219
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 14..121
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 11..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006827.1	Sed0006827.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity