Sed0006804 (gene) Chayote v1

Overview
NameSed0006804
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncysteine proteinase inhibitor A-like
LocationLG11: 1405377 .. 1405688 (+)
RNA-Seq ExpressionSed0006804
SyntenySed0006804
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGTTCAACTATTCCAAGTGTGATAAAGGATGTGGGTTCTCCAATTGTGAGAGAAGTTGGAGAGTTTGCGGTGAATGAGCATAACAAGAAAACACAAGAGAATTTGATATTCAACCGCGTGGTGAATGGTTTGGTATATCCAAGTCCTGCTCATGTTATTACTCCATTTTCCGAATATGATATTGTAGCGGAGGTTCAAGTTCCTGATGGGTTTAAGTGGACATATGTGGCTAAAGTGATTGTCTATACTGATTCAGTTCTCCCCAAGAATTTCATCTCTTTTGACCCTGTCCTCCAGTACAAGTAA

mRNA sequence

ATGAGTGGTTCAACTATTCCAAGTGTGATAAAGGATGTGGGTTCTCCAATTGTGAGAGAAGTTGGAGAGTTTGCGGTGAATGAGCATAACAAGAAAACACAAGAGAATTTGATATTCAACCGCGTGGTGAATGGTTTGGTATATCCAAGTCCTGCTCATGTTATTACTCCATTTTCCGAATATGATATTGTAGCGGAGGTTCAAGTTCCTGATGGGTTTAAGTGGACATATGTGGCTAAAGTGATTGTCTATACTGATTCAGTTCTCCCCAAGAATTTCATCTCTTTTGACCCTGTCCTCCAGTACAAGTAA

Coding sequence (CDS)

ATGAGTGGTTCAACTATTCCAAGTGTGATAAAGGATGTGGGTTCTCCAATTGTGAGAGAAGTTGGAGAGTTTGCGGTGAATGAGCATAACAAGAAAACACAAGAGAATTTGATATTCAACCGCGTGGTGAATGGTTTGGTATATCCAAGTCCTGCTCATGTTATTACTCCATTTTCCGAATATGATATTGTAGCGGAGGTTCAAGTTCCTGATGGGTTTAAGTGGACATATGTGGCTAAAGTGATTGTCTATACTGATTCAGTTCTCCCCAAGAATTTCATCTCTTTTGACCCTGTCCTCCAGTACAAGTAA

Protein sequence

MSGSTIPSVIKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSEYDIVAEVQVPDGFKWTYVAKVIVYTDSVLPKNFISFDPVLQYK
Homology
BLAST of Sed0006804 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-09
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0

Query: 10  IKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE-----YDIV 69
           IKD+  P V+E+G   V++HNKKT ENL F RVVNGL     A  + PFS      Y++V
Sbjct: 10  IKDINDPQVQEIGNLTVDDHNKKTGENLKFVRVVNGLF----AGFVDPFSPLGGTVYELV 69

Query: 70  AEVQVPDGFKWTYVAKVIVYTDSVLP----KNFISFDPVLQYK 104
            E        WTY  KV   T ++ P     NF SF+PVLQY+
Sbjct: 70  LEAINAGKINWTYKVKVSAST-TIRPLGVVYNFQSFEPVLQYE 107

BLAST of Sed0006804 vs. NCBI nr
Match: KAE8648095.1 (hypothetical protein Csa_004720 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 4.4e-09
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 9   VIKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVI-TPFSEYDIVAEV 68
           +IKDV SP V E G+ AV+EHNKK  +NL+F RVV+GL   +P  +I T    Y +V E 
Sbjct: 13  LIKDVHSPNVIEAGKIAVDEHNKKENDNLVFTRVVSGL---APRAIIGTILWSYILVIEA 72

Query: 69  QVPDGFKWTYVAKVIVYTDSVLPKN---FISFDPVLQYK 104
           +  DG+   YVAK++ Y    +P+N    +SF  +L YK
Sbjct: 73  KNCDGYPVAYVAKIVKYL--TIPENSYELVSFQAILGYK 106

BLAST of Sed0006804 vs. NCBI nr
Match: KAE8648094.1 (hypothetical protein Csa_004738 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query: 9   VIKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSEYDIVAEVQ 68
           +IKDV SP V E G+ AV EHNKK  +NL+F RVV+ +     A +      + +V E +
Sbjct: 13  LIKDVHSPDVVEAGKVAVEEHNKKENDNLVFIRVVSAIA--PRALIFIKLWSFILVIEAK 72

Query: 69  VPDGFKWTYVAKVIVYTDSVLPK---NFISFDPVLQYK 104
             +GF  TYV ++  Y    +P+     I F+ VL+YK
Sbjct: 73  TCNGFPVTYVVEIDKYL--TIPEESYKLIRFEAVLEYK 106

BLAST of Sed0006804 vs. NCBI nr
Match: XP_008442277.1 (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa] >TYK05422.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 10  IKDVGSPI-VREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE--YDIVAE 69
           I+D+   + V+++G   V++HNKKT ENL F RVVNGL   S +  I+P     Y++V E
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLA-ASFSDPISPLGGVLYELVLE 69

Query: 70  VQVPDGFKWTYVAKVIVYTDSVLPK-----NFISFDPVLQYK 104
                   WTY A+V   + ++ P      +F SF PVL+Y+
Sbjct: 70  AITTSKINWTYKARV-SKSKAITPPFHMLYSFQSFKPVLEYE 109

BLAST of Sed0006804 vs. NCBI nr
Match: KGN54823.1 (hypothetical protein Csa_012607 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0

Query: 10  IKDVGSPIVREVGEFAV-NEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE---YDIVA 69
           I D+  P V+ +GE AV N ++K + E L F RVVNGL   S  ++   F+E   Y +V 
Sbjct: 13  IIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGL--KSDKYIGPGFTEVILYHLVL 72

Query: 70  EVQVPDGFKWTYVAKVIVYTDSVLPKNFISFDPVLQY 103
           E +  +   WTY  K+   +  ++   F+SF+PVL Y
Sbjct: 73  EAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPY 107

BLAST of Sed0006804 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 10  IKDVGSPI-VREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE--YDIVAE 69
           I+D+   + V+++G   V++HNKKT ENL F RVVNGL   S +  I+P     Y++V E
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLA-ASFSDPISPLGGVLYELVLE 69

Query: 70  VQVPDGFKWTYVAKVIVYTDSVLPK-----NFISFDPVLQYK 104
                   WTY A+V   + ++ P      +F SF PVL+Y+
Sbjct: 70  AITTSKINWTYKARV-SKSKAITPPFHMLYSFQSFKPVLEYE 109

BLAST of Sed0006804 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 10  IKDVGSPI-VREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE--YDIVAE 69
           I+D+   + V+++G   V++HNKKT ENL F RVVNGL   S +  I+P     Y++V E
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLA-ASFSDPISPLGGVLYELVLE 69

Query: 70  VQVPDGFKWTYVAKVIVYTDSVLPK-----NFISFDPVLQYK 104
                   WTY A+V   + ++ P      +F SF PVL+Y+
Sbjct: 70  AITTSKINWTYKARV-SKSKAITPPFHMLYSFQSFKPVLEYE 109

BLAST of Sed0006804 vs. ExPASy TrEMBL
Match: A0A0A0L3W1 (Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.0e-05
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 21  VGEFAVNEHNKKTQENLIFNRVVNGL-----VYPSPAHVITPFSEYDIVAEVQVPDGFKW 80
           +G+ AV +HNKKT +NL    VVNGL     V P   H       Y ++ E +  +G  W
Sbjct: 35  IGQLAVEDHNKKTGDNLELVDVVNGLRSGIFVQPGSTH---EGILYHLLVEAKTIEGINW 94

Query: 81  TYVAKVI-VYTDSVLPKNFISFDPVLQY 103
           TYVAK++ +Y    +   F SF+P+L Y
Sbjct: 95  TYVAKLLELYVGCRIRYEFKSFEPLLPY 119

BLAST of Sed0006804 vs. ExPASy TrEMBL
Match: A0A0A0KZ98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.2e-05
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0

Query: 10  IKDVGSPIVREVGEFAV-NEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSE---YDIVA 69
           I D+  P V+ +GE AV N ++K + E L F RVVNGL   S  ++   F+E   Y +V 
Sbjct: 13  IIDINDPHVQALGELAVENLYSKNSGEKLKFVRVVNGL--KSDKYIGPGFTEVILYHLVL 72

Query: 70  EVQVPDGFKWTYVAKVIVYTDSVLPKNFISFDPVLQY 103
           E +  +   WTY  K+   +  ++   F+SF+PVL Y
Sbjct: 73  EAKTNEEINWTYATKLEEVSGGLIRHVFLSFEPVLPY 107

BLAST of Sed0006804 vs. ExPASy TrEMBL
Match: A0A0A0KRZ8 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-04
Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 0

Query: 10  IKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSEYDIVAEVQV 69
           IKDV S  +R  GEFAV+EHN+ T ENL F +V+NGL        I    ++ +V   + 
Sbjct: 17  IKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRGFRI----DFTLVLSAKN 76

Query: 70  PDGFKWTYVAKVIVYTDSVLPKNFISFDPVL 101
             G  WTY  KV V+ +       + F+ VL
Sbjct: 77  SIGIIWTY--KVKVFLNQRAGVRLLEFEAVL 101

BLAST of Sed0006804 vs. TAIR 10
Match: AT5G47550.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 41.6 bits (96), Expect = 4.5e-04
Identity = 30/92 (32.61%), Postives = 46/92 (50.00%), Query Frame = 0

Query: 8   SVIKDVGSPIVREVGEFAVNEHNKKTQENLIFNRVVNGLVYPSPAHVITPFSEYDIVAEV 67
           S I +V  P V E+GEFAV+E+NK+++  L F  VV+G         +   + Y +    
Sbjct: 32  SPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQ------VVSGTNYRLKVAA 91

Query: 68  QVPDGFKWTYVAKVIVYTDSVLP-KNFISFDP 99
              DG    Y+A  IV+    +  +N  SF+P
Sbjct: 92  NDGDGVSKNYLA--IVWDKPWMKFRNLTSFEP 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649716.13.3e-0944.66hypothetical protein Csa_012476 [Cucumis sativus][more]
KAE8648095.14.4e-0944.44hypothetical protein Csa_004720 [Cucumis sativus][more]
KAE8648094.11.3e-0538.78hypothetical protein Csa_004738 [Cucumis sativus][more]
XP_008442277.11.1e-0438.24PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cys... [more]
KGN54823.11.9e-0437.11hypothetical protein Csa_012607 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TJK05.4e-0538.24Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3B5B95.4e-0538.24cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=... [more]
A0A0A0L3W17.0e-0538.64Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE... [more]
A0A0A0KZ989.2e-0537.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1[more]
A0A0A0KRZ87.8e-0438.46Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE... [more]
Match NameE-valueIdentityDescription
AT5G47550.14.5e-0432.61Cystatin/monellin superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 10..96
e-value: 7.4E-11
score: 42.2
NoneNo IPR availableGENE3D3.10.450.10coord: 4..103
e-value: 3.3E-9
score: 38.6
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 15..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006804.1Sed0006804.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity