Sed0006784 (gene) Chayote v1

Overview


Name	Sed0006784
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VQ motif-containing protein 22-like
Location	LG06: 31807557 .. 31808979 (+)
RNA-Seq Expression	Sed0006784
Synteny	Sed0006784

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTTGAAAAAACTTTAACCAATTTTCTAATATTTTAATTGGTCGTTGACAATAGTACCTGAATACGCCGGTGATTGAGATAAAAACTCGAGACTGAACTGATTTGTAACACCCTCACTAAAAATAAAATACAAGAAAAAAGCATCTTTGACGACGTGAGAGCTACAACAAAACCATAATAAATGGTCTAATTTGACCCCTTGTATGCGGGTCGAAGATAAAATAATAAGTGGCTCCAAAAAGACCTAAAAAAAAGTTTGATTATGAGGTAAGCATTGAATTGCAGCAGGTTTCGAGGAAGCATGCAGTCCACAGTGGCAGCAACAAAATTTTACAAACTCTGCCCTCTCCAGAAGCTTTGAAACAATCCAACATCAGCAGCCCCACGTGCCCCCACACGTGACATCCCTCCTGATGTCACCCTAAAAAGCAAGGCAATATAAAAAAATAAAAATAATAATAATAAAGAAGAAACGGTGGGCGAGGGCAGTCCCCAATGAAATGGGCAATGACCAATTCCTCCTTTGAAACCTTAAAAATTACACGCAGCAGCCGTAGAAAATCTATATATATACTTTTGGGCTCTCCCCAAAACCACTCTTCATTTCCTCATACATCTTTTTTGTTCCTTTCAGATATGGGTGATGAGTGGATACAACATATGTACAACCAACAGCAACTCCCCTTCCACCTTTCCAATCACGATCAACACAACAACAATCCCAGCCTGGTTTCTGATTCCACCCCGCCGCACTCATCCGGCCGAGTCGCCAAGCCGGTCCGCAAGCGGTCAAGGGCCTCCCGACGGACCCCAACCACTTTGCTGAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAATTCACCGGTGGGCCCTCCCATAATCACACCGCCAATTCCGCTTTCGACCCCACCGCCGCCGCCTATCACCAGCCGCTGCAGCAACCGCCGTTTATGTTCTCGTTGGGGAATTCGAGTGAGGCGTTTTTTCAAGAGGGTGGAGGATTGAGGAGTGATAATAATAGTGTGGTAGATTACACGGGGCTCTTTCATGGGTACTCTCCCGCGGCGCACAATCCTCGCCCGGCGTCCTGACTCGATGGTAATTTCTTCGTTTTTTCTTGGGAAGTGAGTGGCGTGTAAAAGTAGAAGTTAGGCACCCATGTCGCCAACTCACAATTTCTTCCAAGGTGACTTTTTTATTTTCTTCTTTTCCTTTTTTTGAGTTCCACGTGTGAACTCGCTCCAATTCCACACATTGTATTCCACGCTTTGGAACCCGTTCCTTTTTTCCCCTTTTTAATTAATATTCCCAAAAATAAAAAAGGTATGGACTCGTATTTATTTATTTTTAATTATTAAATGTCCATTTTCTTTTTCACTTTTTTTTAATTACACTCCCCCCGCCTTTTCTTTTC

mRNA sequence

GAGTTTGAAAAAACTTTAACCAATTTTCTAATATTTTAATTGGTCGTTGACAATAGTACCTGAATACGCCGGTGATTGAGATAAAAACTCGAGACTGAACTGATTTGTAACACCCTCACTAAAAATAAAATACAAGAAAAAAGCATCTTTGACGACGTGAGAGCTACAACAAAACCATAATAAATGGTCTAATTTGACCCCTTGTATGCGGGTCGAAGATAAAATAATAAGTGGCTCCAAAAAGACCTAAAAAAAAGTTTGATTATGAGGTAAGCATTGAATTGCAGCAGGTTTCGAGGAAGCATGCAGTCCACAGTGGCAGCAACAAAATTTTACAAACTCTGCCCTCTCCAGAAGCTTTGAAACAATCCAACATCAGCAGCCCCACGTGCCCCCACACGTGACATCCCTCCTGATGTCACCCTAAAAAGCAAGGCAATATAAAAAAATAAAAATAATAATAATAAAGAAGAAACGGTGGGCGAGGGCAGTCCCCAATGAAATGGGCAATGACCAATTCCTCCTTTGAAACCTTAAAAATTACACGCAGCAGCCGTAGAAAATCTATATATATACTTTTGGGCTCTCCCCAAAACCACTCTTCATTTCCTCATACATCTTTTTTGTTCCTTTCAGATATGGGTGATGAGTGGATACAACATATGTACAACCAACAGCAACTCCCCTTCCACCTTTCCAATCACGATCAACACAACAACAATCCCAGCCTGGTTTCTGATTCCACCCCGCCGCACTCATCCGGCCGAGTCGCCAAGCCGGTCCGCAAGCGGTCAAGGGCCTCCCGACGGACCCCAACCACTTTGCTGAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAATTCACCGGTGGGCCCTCCCATAATCACACCGCCAATTCCGCTTTCGACCCCACCGCCGCCGCCTATCACCAGCCGCTGCAGCAACCGCCGTTTATGTTCTCGTTGGGGAATTCGAGTGAGGCGTTTTTTCAAGAGGGTGGAGGATTGAGGAGTGATAATAATAGTGTGGTAGATTACACGGGGCTCTTTCATGGGTACTCTCCCGCGGCGCACAATCCTCGCCCGGCGTCCTGACTCGATGGTAATTTCTTCGTTTTTTCTTGGGAAGTGAGTGGCGTGTAAAAGTAGAAGTTAGGCACCCATGTCGCCAACTCACAATTTCTTCCAAGGTGACTTTTTTATTTTCTTCTTTTCCTTTTTTTGAGTTCCACGTGTGAACTCGCTCCAATTCCACACATTGTATTCCACGCTTTGGAACCCGTTCCTTTTTTCCCCTTTTTAATTAATATTCCCAAAAATAAAAAAGGTATGGACTCGTATTTATTTATTTTTAATTATTAAATGTCCATTTTCTTTTTCACTTTTTTTTAATTACACTCCCCCCGCCTTTTCTTTTC

Coding sequence (CDS)

ATGAAATGGGCAATGACCAATTCCTCCTTTGAAACCTTAAAAATTACACGCAGCAGCCGTAGAAAATCTATATATATACTTTTGGGCTCTCCCCAAAACCACTCTTCATTTCCTCATACATCTTTTTTGTTCCTTTCAGATATGGGTGATGAGTGGATACAACATATGTACAACCAACAGCAACTCCCCTTCCACCTTTCCAATCACGATCAACACAACAACAATCCCAGCCTGGTTTCTGATTCCACCCCGCCGCACTCATCCGGCCGAGTCGCCAAGCCGGTCCGCAAGCGGTCAAGGGCCTCCCGACGGACCCCAACCACTTTGCTGAACACGGACGCGGCCAATTTCCGAGCCATGGTCCAGCAATTCACCGGTGGGCCCTCCCATAATCACACCGCCAATTCCGCTTTCGACCCCACCGCCGCCGCCTATCACCAGCCGCTGCAGCAACCGCCGTTTATGTTCTCGTTGGGGAATTCGAGTGAGGCGTTTTTTCAAGAGGGTGGAGGATTGAGGAGTGATAATAATAGTGTGGTAGATTACACGGGGCTCTTTCATGGGTACTCTCCCGCGGCGCACAATCCTCGCCCGGCGTCCTGA

Protein sequence

MKWAMTNSSFETLKITRSSRRKSIYILLGSPQNHSSFPHTSFLFLSDMGDEWIQHMYNQQQLPFHLSNHDQHNNNPSLVSDSTPPHSSGRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHNHTANSAFDPTAAAYHQPLQQPPFMFSLGNSSEAFFQEGGGLRSDNNSVVDYTGLFHGYSPAAHNPRPAS

Homology

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BLAST of Sed0006784 vs. NCBI nr
Match: KAG6608003.1 (VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037520.1 VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-38
Identity = 114/200 (57.00%), Postives = 126/200 (63.00%), Query Frame = 0


Query: 48  MGDEWIQHMY---NQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS--- 107
           M D+WI HMY   N QQL F+LS+H Q NN  N  +VSDST            P SS   
Sbjct: 1   MADQWI-HMYHQNNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAVSSATTLPTSSGLI 60

Query: 108 ---GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------HTAN 167
              GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N            +N
Sbjct: 61  PDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSNSN 120

Query: 168 SAFDPTAAAYH----------------QPLQQPPFMFSLGNS--SEAFFQEGGGLRSDNN 198
           + FDPT AAYH                 PLQQPPFMFSLGNS  SE FFQ+GGGLRS N+
Sbjct: 121 AVFDPTVAAYHLDAPPVFQFQNQAPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRS-ND 180

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BLAST of Sed0006784 vs. NCBI nr
Match: XP_022940097.1 (VQ motif-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 114/201 (56.72%), Postives = 126/201 (62.69%), Query Frame = 0


Query: 48  MGDEWIQHMY---NQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS--- 107
           M D+WI HMY   N QQL F+LS+H Q NN  N  +VSDST            P SS   
Sbjct: 1   MADQWI-HMYHQNNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAISSATTLPTSSGLI 60

Query: 108 ---GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------HTAN 167
              GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N            +N
Sbjct: 61  PDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSNSN 120

Query: 168 SAFDPTAAAYH-----------------QPLQQPPFMFSLGNS--SEAFFQEGGGLRSDN 198
           + FDPT AAYH                  PLQQPPFMFSLGNS  SE FFQ+GGGLRS N
Sbjct: 121 AVFDPTVAAYHLDAPPVFQFQNQAPPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRS-N 180

[Close]

BLAST of Sed0006784 vs. NCBI nr
Match: XP_023525782.1 (VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 112/199 (56.28%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 48  MGDEWIQ--HMYNQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS---- 107
           M D+WI+  H  N QQL F+LS+H Q NN  N  +VSDST            P SS    
Sbjct: 1   MADQWIRMYHQNNNQQLSFNLSDHRQLNNDDNSGVVSDSTVVTAAVSSATTLPTSSGLIP 60

Query: 108 --GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------HTANS 167
             GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N            +N+
Sbjct: 61  DGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSNSNA 120

Query: 168 AFDPTAAAY----------------HQPLQQPPFMFSLGNS--SEAFFQEGGGLRSDNNS 198
            FDPT AAY                H PLQQPPFMFSLGNS  SE FFQ+GGGLRS N+S
Sbjct: 121 VFDPTVAAYHLEAPPVFQFQNQPPPHAPLQQPPFMFSLGNSAASETFFQQGGGLRS-NDS 180

[Close]

BLAST of Sed0006784 vs. NCBI nr
Match: XP_022981901.1 (VQ motif-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 164.9 bits (416), Expect = 7.4e-37
Identity = 112/203 (55.17%), Postives = 126/203 (62.07%), Query Frame = 0


Query: 48  MGDEWIQHMY------NQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS 107
           M D+WI HMY      N QQL F+LS+H Q NN  N  +VSDST            P SS
Sbjct: 1   MADQWI-HMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSS 60

Query: 108 ------GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------H 167
                 GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N           
Sbjct: 61  GLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSS 120

Query: 168 TANSAFDPTAAAYH----------------QPLQQPPFMFSLGNS--SEAFFQEGGGLRS 198
            +N+ FDP+ AAY+                 PLQQ PFMFSLGNS  SE FFQ+GGGLRS
Sbjct: 121 NSNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRS 180

[Close]

BLAST of Sed0006784 vs. NCBI nr
Match: XP_038898930.1 (VQ motif-containing protein 22-like [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-32
Identity = 105/208 (50.48%), Postives = 120/208 (57.69%), Query Frame = 0


Query: 48  MGDEWIQHMYNQQ-----QLPFHLSNHDQ--HNNNPSLVSDS-----------TPPHSS- 107
           M + W+ HMY+Q      QLPFHLS+HDQ   NNN   VSDS           TPP S+ 
Sbjct: 1   MSNRWL-HMYHQNNLSNTQLPFHLSDHDQVNTNNNSDTVSDSTVVTAAVSSATTPPASTG 60

Query: 108 ----GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPS------HNH------ 167
               G   KPVRKRSRASRRTPTT+LNTDAANFRAMVQQFTGGPS      HN       
Sbjct: 61  LNPDGSRVKPVRKRSRASRRTPTTVLNTDAANFRAMVQQFTGGPSNANNNLHNFPTFGFP 120

Query: 168 -TANSAFDPTAAAYH-----------------QPLQQPPFMFSLGNSS--EAFFQE--GG 199
               + FDP AAAYH                  PLQQPPFMFSL NS+   AFFQ+  GG
Sbjct: 121 GNCQALFDPAAAAYHLQDPPQQPTLFQFQSQPPPLQQPPFMFSLSNSAAGAAFFQQPHGG 180

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BLAST of Sed0006784 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-15
Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 50  DEWIQHMYNQQQLPFHLSNHDQHNNNPSLVSDSTPPHS-----SGRVAKPVRKRSRASRR 109
           +EW Q  YN  Q  F  S         +   D+T   S     +GRV KP R+RSRASRR
Sbjct: 5   NEWSQ-FYNNNQTFFTTSTTASTAVTTTTAGDTTSIDSRLSPETGRVTKPTRRRSRASRR 64

Query: 110 TPTTLLNTDAANFRAMVQQFTGGP------SHNHTA----NSAFDPTAAAY--------- 169
           TPTTLLNTD +NFRAMVQQ+TGGP      S N T+     S+ DP+A +          
Sbjct: 65  TPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSAGSSQQAPWQYNF 124

Query: 170 --HQPLQQP--PFMFSLGNSSEAFFQEGGGLRSDNNSVVDYTGLF 187
             H PLQ P  P+MFSL N +        G  + NN     +G+F
Sbjct: 125 QPHAPLQPPQRPYMFSLNNVNPVV-----GYSNMNNPNTMVSGVF 163

[Close]

BLAST of Sed0006784 vs. ExPASy TrEMBL
Match: A0A6J1FIN8 (VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111445815 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.5e-39
Identity = 114/201 (56.72%), Postives = 126/201 (62.69%), Query Frame = 0


Query: 48  MGDEWIQHMY---NQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS--- 107
           M D+WI HMY   N QQL F+LS+H Q NN  N  +VSDST            P SS   
Sbjct: 1   MADQWI-HMYHQNNNQQLSFNLSDHRQVNNDDNSGVVSDSTVVTAAISSATTLPTSSGLI 60

Query: 108 ---GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------HTAN 167
              GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N            +N
Sbjct: 61  PDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFPSNSN 120

Query: 168 SAFDPTAAAYH-----------------QPLQQPPFMFSLGNS--SEAFFQEGGGLRSDN 198
           + FDPT AAYH                  PLQQPPFMFSLGNS  SE FFQ+GGGLRS N
Sbjct: 121 AVFDPTVAAYHLDAPPVFQFQNQAPPPPPPLQQPPFMFSLGNSAASETFFQQGGGLRS-N 180

[Close]

BLAST of Sed0006784 vs. ExPASy TrEMBL
Match: A0A6J1IXU5 (VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111480903 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.6e-37
Identity = 112/203 (55.17%), Postives = 126/203 (62.07%), Query Frame = 0


Query: 48  MGDEWIQHMY------NQQQLPFHLSNHDQHNN--NPSLVSDSTP-----------PHSS 107
           M D+WI HMY      N QQL F+LS+H Q NN  N  +VSDST            P SS
Sbjct: 1   MADQWI-HMYHQDNLSNNQQLSFNLSDHHQVNNDDNSGVVSDSTVVTAAVSSATTLPTSS 60

Query: 108 ------GRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHN----------H 167
                 GRV+KPVRKR+RASRRTPTTL NTDAANFRAMVQQFTGGPS+N           
Sbjct: 61  GLIPDGGRVSKPVRKRTRASRRTPTTLFNTDAANFRAMVQQFTGGPSNNASNFSTFGFSS 120

Query: 168 TANSAFDPTAAAYH----------------QPLQQPPFMFSLGNS--SEAFFQEGGGLRS 198
            +N+ FDP+ AAY+                 PLQQ PFMFSLGNS  SE FFQ+GGGLRS
Sbjct: 121 NSNAVFDPSVAAYNLNAPPVFQFQNQAPPPAPLQQQPFMFSLGNSAASETFFQQGGGLRS 180

[Close]

BLAST of Sed0006784 vs. ExPASy TrEMBL
Match: A0A6J1CCZ8 (VQ motif-containing protein 22-like OS=Momordica charantia OX=3673 GN=LOC111010357 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 100/197 (50.76%), Postives = 117/197 (59.39%), Query Frame = 0


Query: 48  MGDEWI----QHMYNQQQLPFHLSNHDQHNNNPSLVSDS-----------TPPHS----- 107
           M D+W+    Q++ NQ  L   LS+H+  N+   LVSDS           TPP S     
Sbjct: 1   MADQWLNIYHQNLSNQPPL---LSDHEIRNS--GLVSDSTVVTAAVSSATTPPGSGPSLS 60

Query: 108 -SGRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHNHTAN----------S 167
             GRV KPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGP+ N+ +N          S
Sbjct: 61  PDGRVGKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPTSNNASNFTFGFPGSTHS 120

Query: 168 AFDP-TAAAYHQPL-------------QQPPFMFSLGNSSEAFFQEGGGLRSDNNSVVDY 200
            +DP +AAAYH P              Q PPFMFSLG+S   F   GGG R+DNN+V DY
Sbjct: 121 VYDPSSAAAYHIPAPPQQAQLFQYQGQQPPPFMFSLGDSPALFQTHGGGPRNDNNNVADY 180

[Close]

BLAST of Sed0006784 vs. ExPASy TrEMBL
Match: A0A6J1FCY7 (VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111442869 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29
Identity = 86/133 (64.66%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 82  STPPHSSG--RVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHNHTANSAFD 141
           +TPP SS   RVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSH     +AFD
Sbjct: 16  TTPPPSSDGVRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHTLHNFAAFD 75

Query: 142 PTAAAY-------------HQPLQQPPFMFSLGNSSEAFFQEGGGLRSDNNSVVDYTGLF 200
           PT AAY             H P  QPPFMFS G   E FF EG   RS+NNS VDY GL+
Sbjct: 76  PTPAAYHLQQPPYLFPFQNHPPPHQPPFMFSAG---EGFFLEGS--RSNNNSNVDYMGLY 135

[Close]

BLAST of Sed0006784 vs. ExPASy TrEMBL
Match: A0A0A0L4D1 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618460 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 100/194 (51.55%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 48  MGDEWIQHMYNQQ-----QLPFHLSNHD--QHNNNPSLVSDS-----------TPPHSSG 107
           M ++W+ +MYNQ      QLPFHLS+HD    NNN  +VSDS           TPP SS 
Sbjct: 1   MANQWL-NMYNQNNLSNTQLPFHLSHHDHLSSNNNSDVVSDSTVVTTAVSSANTPPASSS 60

Query: 108 -------RVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPS------HNH---- 167
                  RVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPS      HN     
Sbjct: 61  GLNPDGTRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSNANNNLHNFATFG 120

Query: 168 ---TANSAFDPTAAAYHQ---PLQQ-----------PPFMFSLGNS--SEAFFQEGGGLR 187
               + + FDP +AA +Q   P QQ           PP MFSL NS   +AF+Q+GGG R
Sbjct: 121 FPCNSQTLFDPASAAAYQVQDPAQQQSVLQFQNQPPPPLMFSLSNSGGGDAFYQQGGGSR 180

[Close]

BLAST of Sed0006784 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-16
Identity = 68/165 (41.21%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 50  DEWIQHMYNQQQLPFHLSNHDQHNNNPSLVSDSTPPHS-----SGRVAKPVRKRSRASRR 109
           +EW Q  YN  Q  F  S         +   D+T   S     +GRV KP R+RSRASRR
Sbjct: 5   NEWSQ-FYNNNQTFFTTSTTASTAVTTTTAGDTTSIDSRLSPETGRVTKPTRRRSRASRR 64

Query: 110 TPTTLLNTDAANFRAMVQQFTGGP------SHNHTA----NSAFDPTAAAY--------- 169
           TPTTLLNTD +NFRAMVQQ+TGGP      S N T+     S+ DP+A +          
Sbjct: 65  TPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSAGSSQQAPWQYNF 124

Query: 170 --HQPLQQP--PFMFSLGNSSEAFFQEGGGLRSDNNSVVDYTGLF 187
             H PLQ P  P+MFSL N +        G  + NN     +G+F
Sbjct: 125 QPHAPLQPPQRPYMFSLNNVNPVV-----GYSNMNNPNTMVSGVF 163

[Close]

BLAST of Sed0006784 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 45  LSDMGDEWIQHMYNQQQLPFHLSNHDQHNNNPSLVSDSTPPHSSGRVAKPVRKRSRASRR 104
           +++  ++W Q  YN Q      ++        +  +DS     + RVAKP R+RSRASRR
Sbjct: 1   MANSNNDWSQ-FYNNQTFFTTATSTVTTTTTTATSADSPLSPDNRRVAKPTRRRSRASRR 60

Query: 105 TPTTLLNTDAANFRAMVQQFTGGPS---HNHTANSAF-----DPTAAAYHQP-------- 162
           TPTTL NTD ANFRAMVQQFTGGPS      + +S F     DPTA     P        
Sbjct: 61  TPTTLFNTDTANFRAMVQQFTGGPSAVAFGSSPSSGFSLTSSDPTAGVSSSPWQYANLQN 120

[Close]

BLAST of Sed0006784 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 58  NQQQLPFHLSNHDQHNNNPSLVSDSTPPHSSGRVAKPVRKRSRASRRTPTTLLNTDAANF 117
           NQQ  P       Q +   S  + S PP ++  V K  +KRSRASRR PTT+L TD +NF
Sbjct: 82  NQQPDPI-----SQLDLRTSSATSSLPPTNNIGVIKKTKKRSRASRRAPTTVLTTDTSNF 141

Query: 118 RAMVQQFTGGPS 130
           RAMVQ+FTG P+
Sbjct: 142 RAMVQEFTGIPA 148

[Close]

BLAST of Sed0006784 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-07
Identity = 31/68 (45.59%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 73  NNNPSLVSDSTPPHSSGRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGPSHNH 132
           N    + S  T   +     +  +KRSR SRR PTT+L TD +NFRAMVQ+FTG PS   
Sbjct: 117 NTTSPICSVPTDKKNGLATTRNPKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPF 176

Query: 133 TANSAFDP 141
           T  S+  P
Sbjct: 177 TGLSSSFP 184

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BLAST of Sed0006784 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 49/141 (34.75%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 29  GSPQNHSSF-------PHTSFLFLSDMGDEWIQHMYNQQQLPF--HLSNHDQHNNNPSLV 88
           G+PQ+HSSF       P +S  +  D          +   L F  +L + D  N    L 
Sbjct: 22  GAPQDHSSFFLPPFQPPPSSSTYYGDPTTLSSSSSSSATYLNFVNNLISDDILNQTHLLP 81

Query: 89  SD--STPPHSSGRVAKPVRKRSRASRRTPTTLLNTDAANFRAMVQQFTGGP----SHNHT 148
                 PP      ++  RKR+RASRR PTT+L TD +NFRAMVQ+FTG P    SH  +
Sbjct: 82  PQPPPPPPPPPPSSSRNPRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSHPFS 141

Query: 149 ANSAFDPTAAAYHQPLQQPPF 155
           + +       +   PL   PF
Sbjct: 142 STTRRFDIFRSPSDPLTYNPF 162

The following BLAST results are available for this feature:

BLAST of Sed0006784 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608003.1	1.3e-38	57.00	VQ motif-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022940097.1	1.8e-38	56.72	VQ motif-containing protein 22-like [Cucurbita moschata]	[more]
XP_023525782.1	1.8e-38	56.28	VQ motif-containing protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981901.1	7.4e-37	55.17	VQ motif-containing protein 22-like [Cucurbita maxima]	[more]
XP_038898930.1	2.5e-32	50.48	VQ motif-containing protein 22-like [Benincasa hispida]	[more]

BLAST of Sed0006784 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	4.8e-15	41.21	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Sed0006784 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIN8	8.5e-39	56.72	VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC11144581...	[more]
A0A6J1IXU5	3.6e-37	55.17	VQ motif-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111480903 ...	[more]
A0A6J1CCZ8	2.0e-32	50.76	VQ motif-containing protein 22-like OS=Momordica charantia OX=3673 GN=LOC1110103...	[more]
A0A6J1FCY7	2.1e-29	64.66	VQ motif-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC11144286...	[more]
A0A0A0L4D1	2.7e-29	51.55	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618460 PE=4 SV=...	[more]

BLAST of Sed0006784 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22160.1	3.4e-16	41.21	VQ motif-containing protein	[more]
AT4G15120.1	1.4e-14	40.43	VQ motif-containing protein	[more]
AT4G39720.1	1.2e-08	50.00	VQ motif-containing protein	[more]
AT5G65170.1	3.8e-07	45.59	VQ motif-containing protein	[more]
AT1G35830.1	1.1e-06	34.75	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 104..130 e-value: 6.3E-12 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..106
None	No IPR available	PANTHER	PTHR33179:SF29	VQ MOTIF-CONTAINING PROTEIN	coord: 75..140
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 75..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006784.1	Sed0006784.1	mRNA