Sed0006701 (gene) Chayote v1

Overview


Name	Sed0006701
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reticulon-like protein
Location	LG08: 30818046 .. 30827693 (-)
RNA-Seq Expression	Sed0006701
Synteny	Sed0006701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGACCTTCCCTGTCCAGACATTAACGTTTTGCTTGTTTGCATGTGAAAAGCTTTCTCAAATCCTTTTTAACCCCCCCAAAAAAATTAATTTCCATTTCCCCCAATCTTCCCCTTCTTCACTTTCCCTTCAGATTCCCAAAATTTCAAACCCAAAAATTCCAGAATCAGGCCCACTCTCCATTTGGCACCACAACCCAACAAATTATCTATTCGATTCATAGGATTTTCCTCTGTTTTTTCATCTTCCTGTCCGCCATTGTTGCTCTGTTTCAAAGCTCAGAGCTAGAGAAAACAAGAAACTCTCTTTTTTGGGTTCTATGGATTTGAGCCGGAGGCGGGCGACGGCGAAGGGGAACGTGGTGGCGGGTTCTGTCTGGGAGAGCAGAATCCGACTCGATGAAGTCCGTGGTGGGATTAGGGTTTTTAACGCCGACGACGAAAGTCCCCAATCCGAGGCTCCGGCCGCCGTTTCTTCCGCCGTCGGCGGCAGTGCAAGGAGGAAGACGTGGAAATCCGACGAGGGTTTTAGCTCGTTTCTCATCGCCGAGGAAAAACCGGAGTCGCCGAGTAGCGGAGATGAGCAGAGTCGGAAAAGCCCCATTCCGGTCCGGAGATTGAGATCCAGCGGCAGTCCGAACAAACCGGTTCAATTAACAGAGAGAAACTCTTCGAGAAAGAGGACCGAACCTTCTAGAAAACCGACCGTCGGGATTACTAAACCGGCGTCTAACGGAATCCGAAAAAATTCGCCAGAGAAGTCTATTTCATCAGCTCCACCTCAAGATTTCTTCGACGCATTTGAAGAAGTGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGCAAGAAAATCGTCGAAAAAACTTTCCCGGGAAACAAACAGAAACTACAGACATTAAGTGAGAAACCTTCCCTTTTCATTACAGAATCTCAAACTTCTGATTTTCAATTTCATTTCCCCTAATTCATTTTCTTGCAATCTTTGGTATGTTCCAGTTGATTTGATAATGTGGAGAGATTTGTCAAGATCCGGTCTAGTTTTTGGAGTGGGGAATTTGGTCATAATCGTCTCATATTTCATCAAGAACATCAATATCAGGTTTTTAAAAAAAAACCCAAATCCGCCATTGTTGAGATGATGAAGAACATGGGTTGATGATTTTTTGTTTTGATTTTGGTTTTTGCAGCTTTATCAGTGTGATTTCGCACATGGGTCTTGTTTATCTCGCTGCCATTTTCGTTTATAGCTCCATTTTTGGCAGGTACTTTATGGTTTACAGAATTTAAAAGAAGAAGCCATTACAGGGGAGTTTATTTTCTTTTGTGAGCTTTAATTTTTTATTTGGTAAAATTACAGGAAAAAAGGAATTGATTATGATGATGAAAATTGTGTGGTTGAAGAAGAAGAAGTGATTCGATTTGTTAAACAATTTGTTCCTTTGATCAATGAATTGTTGCGAAATTTTAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCATGAAGGTAATTTTCTTTCTTCTATTATAGAACATAATTAAATTCCATTTAAAAAAAAAAAATATATATATATATATATATATATTTTCATTTTCCAAGCTCATTGAGGAAAATAGAAACATTTTAGTTTCTTGTTCGAATTTCATTTAAGTATAGCTATGTAGATTAATTTTTTGTTCGTTTAACTATATTAAATAATGAACAAAAATAAATTGATGAGTAAAGAAATGATTCTGTACATGAAAGTTGATGAAAGTTGAGGTTAATGTATTGGCCATTTGAGTAGTTATGGAATGATTTTAATTGTAAGGACAGAAATGAATATGGTGTAGAAATATTTTATTGCATTTAATAATTTTTTTTGAATTGCTGTAGTAAAAAAATAATAAAAAGCTGAAACACATTCTAAGCTATTGGGAAAAGTAATTTGGCATTTAGGGACATGTTGTTTTTCTATTTGAAATAGTGTCGGTTGGATATTTTCGAGGGGTGGCGATAAGATAAATTATATTTTAAAATTGTTACATTACCATTTTAATTTCACTACGTGGTGAATTTGGCAAGCTTTGTAGGCCATTTTGGATTTATATAGGAGTCCATTTAATTTTCCAAAATTGTACTTTTATTCTTTCTAATTAATCCTTCCTAATAATCTCAAAAACAAAAAAAACCTTCCTAATAGGCATTTTTGTTTTTGTCCATCCTATCTAAACAAAGTTGTATTAAAAAAAATTTGAGTAAAAAAATATATTTGGACTAGTTAGTACTTAATAAAATATTTGAAATTTTAGTTAAATTCCAAAATATTAACTAGTTTTTGAAATCTTGGTGTGTTTTTGATATCTAGTTAAATTCCAAAAAAATGGAAACATGTTTTAGAATGTAATTCTTGTAGTTCTCTAAATTTTGTTGGTATTTATAGCATGTATGAATGGAATGTAGGTATTGGAATATTGAATAAAGCTTAATTTTAAAAACTAAAATTTAAAAAGATAAATGTGTCTGGATCCATGTATATAAGAATTGGCAAGTTTAGTAGATATTTTGACAATTGTATCATCAATTATGGGGGGTAAAGAAATCTATGGTTAATTTTAAAAAAGTTGATATAGTTATTTTGATGTTGTCATATGAATTTTATTTTTAAAGAAAAGTAATTTAAACAAACGAACTCAAAAGGACACTTAATTTATTTTTCCATTTAAAATAAAGTTCTATTTAAGGATATGAAAATTCTACATGGTTTGAGTTTTCTTGTTAATAAATATTGATGTTTGGTAATTTGCAGTTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGCAGCTTCATCACCCTTTGGAATCTTCTCAAATGTGGTAAAATATTAACTCCCATTTTTTATTTTGGTAAATTAGTTGCTCTTTTTATCTCTTTCTTTGGTTTCAATTAAGATCAATTTGGTTATAGTAAAAAGATGAAAAGGGAATAAATTGTAATTTAATTTTGGCCCAAAATACTTTTTTTGGTTCTACATTTTTAAGCTATGGTTCATTTTGGTCTCTCTTATTATTTCTTAATCACAATTTTAGCACAACATTATGGGTGTGTTTGGAATACCGAATTGGTTACGATAGACGGAAGATTAAAATAAATGGTGAGTTATTATAAATGGAGTTTGTGAGACATGTTATTATAATAAAGATTATAATAAATAGTGTTTGAAGGACTGATTATGCAACAAAAAGTAATTTATGTAAGGTTAGGTAAACGAGTACGTAAGTTTATATAAACGGACATAGATTTAGGTAATTATTGTATGGAATAAATATAAAATCTGATTTACATATATAGGCCCAAATACACCCTATGCTACAATTTATAATAAAAAATTATAAAATCCAGAACTTGTATGCACAATTTAGGGTATTAATTTAACATAAATAATGTGTAAATTGGAATACTGGTTTGTTTCTTTTTTATTATAATTTTTTTTTGGTTCTGACAAATGGATGTACTGATTTGACTGGCACAGGATTCGTTGGTGGTTTCACGGTGCCCAAACTGATTACCCACGGTAAAAACGCATCTCCACCGACTTAACTTTTCATCCCTCTTATATTAACTTTCGCCTATACGTCTTGTCGGGGTTACAATTCAATACGGGCGAGTACAACAAAACACCGTACGCCTTTGTCTTTCCGTCCGTCGATTTGGTTGACCCCTCTCCGACACCATCCTGACCCTCTTTTGTCCCTTTTACAAAACGTCTACGTTTCAACCCTCACGTCCCATCACAACTGAAAACCCATTATTTCTTTTTTTCTATTTATAGACTTATATATTTAGACTCAGTTTAGACGTCTAGTGGGGTCCACGCTAACCTTCACGAGCCGTTACTGTTTTTTATTTTATTTTCTGAATTTAAAAGTTTTATTTTTTTTTTTTAGTACATATTGGGGGAGGGGGGACAAATACCAATTCTCGGACTCAAATGTGTGATGCTGGTGTTGAACTGGTTTACAACCAAACAATGAAACCATTGCGCCACTCACTCATTCGGTGAATTTAAAAGATTTTGAAAAGTGGAACAAAATAGAATTATTAATTTCTTTGTCGGTAGCATCAATTTTTTCAATAGTATTTTGTCTCTTCAATTGTTTTTATTTATTTTATTTGAATCTTTGGAATTTTATATATATATATATAATTCAAACTAATTGGACACAGCTTATTTGGTTATAATAACCTAACATATGCCCTTACCTAATAATTAATTTTTTTTTTTTGAAAACTAACAATTTAAACATACAGGTTCATTACCTATCCTTCTAGAAAGACCACATACAGGTTCATTTGGTCGAAGAGTGACCACCCAAACCACATAAACCTACAACAGAGCCAATATTGTAATGAAAGCAATTCCTTCATGCCAAAGTCTTAACTCTTAACCATATTGGAATAGTGGGATTCCAATTGGAGCGACCCATAACTATCACTCCTCTTGATTCATTGAGTTTTTTGATAGACCTTGAGGAATAATTTGATGTCCATCTCGATGTCGGAAGGATCGGACTCCATCAAGGTTTAAAAGAGAAAGTAACTCTCATTTGAGTATTAAAAATCCCCAACCATGAAACCAACACCTTCTACAAACAATGCTTACCTTTGTCCATAAGTTCACTCAAGACCAATGCAACAAAAAAAACCCAAAATTCACACATAGTAAGGAACATATCTAGACCCCTCAGCCCACTGCCCTCCAAAGACTGACTACAAAAAGAATTAAAAGTAAATTTTGACTATAGACAACACTAAGAAAAAAAAAAAACAAACCCAGAACAAACCAAAAGCAGATCGAGAATGGCAGAAGACGTTGAAAAAATAAGTTTCCGATCCAAAGAACTGGCCGTTTCATTAGGACCAGACTTATGGACCCCAAACCCAATCGGTTTTGAAGAACCGAGGGTCTAATCAATGGACCTGACCGGTTTTTCTGAAGTATTGGTCCAGTTAGTGCAACCAACTGGATCCAACCGTCTAGTTTGCAATGGTCCACAAATCCAAAAACATGTTGCCCAAGCTTGCAATTTTGACAATCCTCATCATGTGGCTCGATGGCCTTAATCAATTGAAATGATGTGTTTTCACCATCTGTCATTTTCCTCTACAATCAAAATGACGCGTTGTCATCGGCGTTCTCACTAGACCCACCACCGTCTTCAACAATCGGTCTCTCCATCTCCTTTGGCCTTTTCTTCCTAAAAAAACCTTGATCTTTTTTGCATTGGACCGAACTGTTTAGTTAGCAATGGTACACAAATTGAAAAAACATTTTGCCCAAGTTTGCAATTATGACAGTCCTCATCATGTGGCTCGATGGCCTCGATCAACCCCCCATCTGTCGCTTTCCTTTACAACTGAAATGATGCGTTGTCATCGACATTCTCACTAAAGCCACCACCGTCTTCAACAACTGGTCTCATATTTTCCTCTTTGATACTCGCCATCCCCTTTGGCTTCTTCTTCCTAAAAAAACCTCGATATCTTTTGCACGGGTCCCAATTGTTTAGTTAGCAATGGTTCATAAATCCAATGAACATGCTGCCCAAGGTTGCAATTCTATCAGTCCTCATCACGTGGCTCAATGGTCTCGAACAACCGAAATGATGCGTTCTCACCATCTCTTGTTTTCCTCTACAACCGAAATGATGCATTCACCAATGTTTTCACTGGACCCACCACCATCTTCAACAATCAGTCTAAGATTTTCCTCTTTGCCAAGTATGTTGCCAGAATCGCCATCTCCTTCGACTTCCTTTTCCACAAAAAACCTTGATCTCTTTTGCCCTTGCAAAGGTCACCGTTAGAGTATCCAACATCTTCTAGAAACTCTTGTTGTGGAGGGGGTTTCCCCTATCGAACGGGGTTTTCCCCCTTCCTAGTCCCTTCTCCAACCTTCTGGGAGTCGAGATCTCAACCTCCAAGTTCTAGTCTTCTTCTCTCAAGAACTTTGCCTCTTTCAACTCTTTTTCGAACCAACACAAATCTCACAACCCCCAAGAAGATTTCAACCCAGTGAAGCAAAACGAAGAAGCGCTAACCTGAGCCTTACATGGCGTTAGATAATGAGTCTCTCAAAATGTAGAATGACCACGTCGACTAAAACCAACTAGCATCTCCGTGTAGGGATCAATAATGACTTCTTTGATCTCCTCCTTCTCGCTCCTTTAAGCTCCACCAACATTGCTCCCCACTAAGCCCCCTAACTGCTCAGGTCTCAACCTCTTAAGAGAGTGCAATGGAGCCTCGAAACGCACATACAAGTGCCCACAATTGCTCACAAGCGGATCTCCAGGGAGACCCAATTGGAGTCCATGGAGGCTTCGTCTTTCACTTGAACTTAGTGAGAGAGAACCTCATTTGTTTCTGTTTGTACATTTAACCTTACCTAATAATTAATTTTTTAAATATTCAAATGTTATAGATTCAAGCAGTATGTCATGTGAAAATAGTCGTAGTGCGTAAGTTGGCCAAGATATATATAAACATTCACCCATAACACTATAAATATAATGCCTTATACCCCAAATGTAGATTATTTTAACCATTGGTATAATAACCCACCATTTTAGATTAATACAATTGTTGTCGTAATCGAACTCTTAGGATTTTGTTTCATTTTAGGGTCAAACGTTTTATTTGGTTTAACCCTACCGCTTTCCTAGACATCCAAATGTTGTAGGGTCTGGTGGTATGCCCCGTGAGATTAGTCGAGGTGCGCACAAACTGGCCTGGAAAGCCACAGATTAAAGAAAAAAAGACATTTTAAAATTTACTAACCATTATGGGTTAGAGTTATTGCAAGAGAATTGAGGACTAAGAAGCTATTTGTTCAATCTACAATGATCAATTTTTTAGACCTCGTTTGATAAATATTTTGTTTTAAGTTTTTGGTTTTTGAAATTTAAGCTTACAACAACTATCTTACCATATGTTTTTCCTTCGTTGGATATCTACATCTGACCTATATTTCTAGAAACGAAACCAAAATTTGGAAACAAATAAAAGTAGCTTCCAAAAGTTTGTTTTTGTTTTGAAATTTGGTTAGCTTTCACCTACTTTCTTGAGGTAAGATGGATACATTGTATGAAAAATGAAACATATTGTAGGAAATTTTGAGTAAAAATAAACGTAAATTTCAAAAATAAAAAACAAAAAACCAAATGATTATCAAACGGGGCCTTAGAAACTAATTTCTTATAGATTTCATTGACATTCAATTGTTGTAGGGTCAAGATCTATAACTTTGGTTAGATTAATCGAGTTCGCATAAATTTATTCGGTCATTCATAGATACAAATAATACTAAACTCCACACAAATGAAACTTCGAGTCATTAAATTTGATTTTATATCTAAAAGAATATTTAGTCTTTAATTTTTTGAAGGTGCAAAAGTGAAATAATTAGGGATCTGAGAAACATTTCTAAAGCTCAAGAACCAATGAGACTTTTTATAGTTGGTTGTCCAAACATGTAATTTATTCTCTTTTTGTAGTTGAGTGACCAAATTTTTCCTTGAAGAATTCTTAGATCATTGGTTGAACCATCAACTTTTAGGATGGTAATAGTTGTCTTATCTATGGAAACTATATTTTGACTCAAGAGTACACATTTTAAAAGAATTATAATTTATCCAGTTGGTCCCACAAGGAAGCAAACCCTCCCCACCCAATGCTGCTCTTTATAGGATACCTAGCAAGTAGGTCCATAGGAATGGGCTGCCCTAAAACCACCATGTGACCTCTTTTTTTAACCTCTACTCAATTTTGATGGGTTTTGGCCTTCTAACCTAGGGACTAGTGTTTACAAGTCTTTGGCATACTTATGAAACTCACTTTTTATACTTTATATTAACTTTTACCAATCATAATTCTTCCTCAATAATTCAGGCTTTTATGTTCTTTTCACTTATGTTGTCTAAATATAGGTTACACTAACTTATACTTTATGTCTCACCACATATTGGAATTTTGAGCCAATTATTTTCAATGTTTGATATATTAGTTAAAAAAACATTTGGAATTGTGAGCCAATTATTATCTCTAATGTTTGATCTTTTAGTTAAAAAATCAATTGAGGGTTCATATGATATCTTGGTCACATGTCTAAATTTTATGCCTGGTTGAACTGTTCATTCGTAACTAAAATGTTTGTTAGGCCTTGTTAAAAATTAAATTTGTACTTTGATTTACTTATCTTAAAGCTAACCATAGTGGTCTAGTTGTTAAGTTGATTTACTTATCTTAAAGCTAACCATTAGAGTGGTCTAATTGTCAAGGGAGTTTTGTGGAATTGTCCCCAAGGGCACACTGGTTGAACAGTTGAGTTTGAAGGTATACCTTTAAAGTCTCAGGTTCGAGATTTAAAAAAAAAAAGAGTTTAGTGTACCTAAGAATTAACTTCTTATAGGTTTTTTTGAATATGTGTATGTTGGCACTAGTTAGGGATATTAAAAAAGAAAAAAATACAAAACATTTTGTTATTTTGTAATGTATTTTATAGAATCTCTTACACGTTAAAAAGTATTGGTGGGTTGGGATGCTCCATTGTAATGTACATTCATTGGATATGTGTTTATGCTTTCTCTTAGGTGAACATTGGTTGAAACTTTGTGGGAGTTCTTGGAAGCTATGTTCCCACAAGAAGGGGATGGCTGTTGCCCTTTTCTTTTTAGTGTGGAATTTCTCGTCGACTCTATATCGCTTTTGGGCGGGTAAGCTATTTTGAACTTAAATTTCTATCTATAAATTACAAATATACCTCATATTTAAATTGTCAAATTATTTTCAAAACATAGCTCAATGGTGTGGAACATGACTGATGTACTCGTTAGGGGACAGTTGATCGGTGTATTAGGCTGGATTATATAATCAACTATCATTTGGGCCATCGGTTATGATTACTTTGTGGCTTTCAACTTATAACGCTCCATCTTAACTATAATACTCTTTATATTAACTATTAAATCTCTGCTACAATATCCCTTGAATTTCAACCTCTGTACTTCAAACACGGTATTATAACCTTGCTTTTATATTAATTCGTTATTTATGAGAACTCAATCGTTGCCCAAAACGCACCCTTAATGAAAACAATAACTCAGAAGCGTTTCAAAACATATCCATATATGAAATTTGAAGCAAGATTTGTATAGGTTTCATTGTGTTCGTGAGCTTTCGGTACTATCAGGAGACTTCAAAGGGAGATGGTTGGGTTAGAAATGGAGAAGCAGCTCGACATAACGACATCGTTTCAGTAAGTTCAAAGCTCAAGAGACAATATTAATAGATTTTGAGGCAATTTTTCTCTTGTTTTGTTTTTTTGAGCTAGCTAGTTGATCATTACTTTGTAAATTAATGGGCTACATTAGATGCAATCTGAAGAGGGAAAAGGGGGAATGGTTGCCATTTTCCTTTATTGAAATCAATGAATACTTTTTCAGAAGTGAAAGTGAGTGAAGATGGAGAGAAATTATTGACTGTGGTCTCGTGAGTCTTGTCAGGGTAGCAAACAAATTTAGCAGCAAGGAAAACAAAAGTTAGCATTTTTGACTTTATATATTTATTATTTCATTTAAAGCAAAAAAATAT

mRNA sequence

CATGGACCTTCCCTGTCCAGACATTAACGTTTTGCTTGTTTGCATGTGAAAAGCTTTCTCAAATCCTTTTTAACCCCCCCAAAAAAATTAATTTCCATTTCCCCCAATCTTCCCCTTCTTCACTTTCCCTTCAGATTCCCAAAATTTCAAACCCAAAAATTCCAGAATCAGGCCCACTCTCCATTTGGCACCACAACCCAACAAATTATCTATTCGATTCATAGGATTTTCCTCTGTTTTTTCATCTTCCTGTCCGCCATTGTTGCTCTGTTTCAAAGCTCAGAGCTAGAGAAAACAAGAAACTCTCTTTTTTGGGTTCTATGGATTTGAGCCGGAGGCGGGCGACGGCGAAGGGGAACGTGGTGGCGGGTTCTGTCTGGGAGAGCAGAATCCGACTCGATGAAGTCCGTGGTGGGATTAGGGTTTTTAACGCCGACGACGAAAGTCCCCAATCCGAGGCTCCGGCCGCCGTTTCTTCCGCCGTCGGCGGCAGTGCAAGGAGGAAGACGTGGAAATCCGACGAGGGTTTTAGCTCGTTTCTCATCGCCGAGGAAAAACCGGAGTCGCCGAGTAGCGGAGATGAGCAGAGTCGGAAAAGCCCCATTCCGGTCCGGAGATTGAGATCCAGCGGCAGTCCGAACAAACCGGTTCAATTAACAGAGAGAAACTCTTCGAGAAAGAGGACCGAACCTTCTAGAAAACCGACCGTCGGGATTACTAAACCGGCGTCTAACGGAATCCGAAAAAATTCGCCAGAGAAGTCTATTTCATCAGCTCCACCTCAAGATTTCTTCGACGCATTTGAAGAAGTGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGCAAGAAAATCGTCGAAAAAACTTTCCCGGGAAACAAACAGAAACTACAGACATTAATTGATTTGATAATGTGGAGAGATTTGTCAAGATCCGGTCTAGTTTTTGGAGTGGGGAATTTGGTCATAATCGTCTCATATTTCATCAAGAACATCAATATCAGCTTTATCAGTGTGATTTCGCACATGGGTCTTGTTTATCTCGCTGCCATTTTCGTTTATAGCTCCATTTTTGGCAGGAAAAAAGGAATTGATTATGATGATGAAAATTGTGTGGTTGAAGAAGAAGAAGTGATTCGATTTGTTAAACAATTTGTTCCTTTGATCAATGAATTGTTGCGAAATTTTAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCATGAAGTTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGCAGCTTCATCACCCTTTGGAATCTTCTCAAATGTGGATTCGTTGGTGGTTTCACGGTGCCCAAACTGATTACCCACGGTGAACATTGGTTGAAACTTTGTGGGAGTTCTTGGAAGCTATGTTCCCACAAGAAGGGGATGGCTGTTGCCCTTTTCTTTTTAGTGTGGAATTTCTCGTCGACTCTATATCGCTTTTGGGCGGGTTTCATTGTGTTCGTGAGCTTTCGGTACTATCAGGAGACTTCAAAGGGAGATGGTTGGGTTAGAAATGGAGAAGCAGCTCGACATAACGACATCGTTTCAGTAAGTTCAAAGCTCAAGAGACAATATTAATAGATTTTGAGGCAATTTTTCTCTTGTTTTGTTTTTTTGAGCTAGCTAGTTGATCATTACTTTGTAAATTAATGGGCTACATTAGATGCAATCTGAAGAGGGAAAAGGGGGAATGGTTGCCATTTTCCTTTATTGAAATCAATGAATACTTTTTCAGAAGTGAAAGTGAGTGAAGATGGAGAGAAATTATTGACTGTGGTCTCGTGAGTCTTGTCAGGGTAGCAAACAAATTTAGCAGCAAGGAAAACAAAAGTTAGCATTTTTGACTTTATATATTTATTATTTCATTTAAAGCAAAAAAATAT

Coding sequence (CDS)

ATGGATTTGAGCCGGAGGCGGGCGACGGCGAAGGGGAACGTGGTGGCGGGTTCTGTCTGGGAGAGCAGAATCCGACTCGATGAAGTCCGTGGTGGGATTAGGGTTTTTAACGCCGACGACGAAAGTCCCCAATCCGAGGCTCCGGCCGCCGTTTCTTCCGCCGTCGGCGGCAGTGCAAGGAGGAAGACGTGGAAATCCGACGAGGGTTTTAGCTCGTTTCTCATCGCCGAGGAAAAACCGGAGTCGCCGAGTAGCGGAGATGAGCAGAGTCGGAAAAGCCCCATTCCGGTCCGGAGATTGAGATCCAGCGGCAGTCCGAACAAACCGGTTCAATTAACAGAGAGAAACTCTTCGAGAAAGAGGACCGAACCTTCTAGAAAACCGACCGTCGGGATTACTAAACCGGCGTCTAACGGAATCCGAAAAAATTCGCCAGAGAAGTCTATTTCATCAGCTCCACCTCAAGATTTCTTCGACGCATTTGAAGAAGTGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGCAAGAAAATCGTCGAAAAAACTTTCCCGGGAAACAAACAGAAACTACAGACATTAATTGATTTGATAATGTGGAGAGATTTGTCAAGATCCGGTCTAGTTTTTGGAGTGGGGAATTTGGTCATAATCGTCTCATATTTCATCAAGAACATCAATATCAGCTTTATCAGTGTGATTTCGCACATGGGTCTTGTTTATCTCGCTGCCATTTTCGTTTATAGCTCCATTTTTGGCAGGAAAAAAGGAATTGATTATGATGATGAAAATTGTGTGGTTGAAGAAGAAGAAGTGATTCGATTTGTTAAACAATTTGTTCCTTTGATCAATGAATTGTTGCGAAATTTTAAGGCTCTGTTCCGTGGAGATCCTTCCGCAACCATGAAGTTGGGTGTATTGCTGTTTGTGTTGGCAAAGTGGGGCAGCTTCATCACCCTTTGGAATCTTCTCAAATGTGGATTCGTTGGTGGTTTCACGGTGCCCAAACTGATTACCCACGGTGAACATTGGTTGAAACTTTGTGGGAGTTCTTGGAAGCTATGTTCCCACAAGAAGGGGATGGCTGTTGCCCTTTTCTTTTTAGTGTGGAATTTCTCGTCGACTCTATATCGCTTTTGGGCGGGTTTCATTGTGTTCGTGAGCTTTCGGTACTATCAGGAGACTTCAAAGGGAGATGGTTGGGTTAGAAATGGAGAAGCAGCTCGACATAACGACATCGTTTCAGTAAGTTCAAAGCTCAAGAGACAATATTAA

Protein sequence

MDLSRRRATAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAVGGSARRKTWKSDEGFSSFLIAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKSISSAPPQDFFDAFEEVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGDGWVRNGEAARHNDIVSVSSKLKRQY

Homology

[Close]

BLAST of Sed0006701 vs. NCBI nr
Match: XP_038890790.1 (reticulon-like protein B21 [Benincasa hispida] >XP_038890791.1 reticulon-like protein B21 [Benincasa hispida])

HSP 1 Score: 644.8 bits (1662), Expect = 5.2e-181
Identity = 338/446 (75.78%), Postives = 374/446 (83.86%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAVGGS 60
           MDLSRRRA   A+GNVVAGSVWESRIR DEVRGGI+VFN DD++ +   P   ++A GGS
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDDNAECGIPTTAAAATGGS 60

Query: 61  ARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQL----T 120
            RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSPIP RRLRS+GSPNKPVQ+    T
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPIPARRLRSNGSPNKPVQISGEKT 120

Query: 121 ERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAFE 180
           E+NS+RK+T+ SRK  VG+TKP +NGI K  PEKS           ISSAP QDFFDAFE
Sbjct: 121 EKNSTRKKTDQSRKSAVGLTKPPTNGIGKTPPEKSFKELNECREKVISSAPSQDFFDAFE 180

Query: 181 EVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVII 240
           E  EKESFDVKEINLPERKKIV KTFP NKQKLQTL+DLIMWRD SRS LVFGVGNLVII
Sbjct: 181 EEFEKESFDVKEINLPERKKIVAKTFPRNKQKLQTLMDLIMWRDFSRSALVFGVGNLVII 240

Query: 241 VSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQ 300
           +SYFIKNINISF+S+ISHMGL+YLAAIFV+ SIFGR+KGID +DEN  VEEE +IRF K+
Sbjct: 241 LSYFIKNINISFMSLISHMGLLYLAAIFVHRSIFGRRKGIDSNDENYAVEEENMIRFAKR 300

Query: 301 FVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLI 360
            VP +NELL+N KALFRGDPSATMK+GVLLFVLAKWGSFITLWN+LK GF+G FTVPKLI
Sbjct: 301 LVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTVPKLI 360

Query: 361 THGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKG 420
           THGEHWLKLCGSSWKLCSHKKG+ VA+FFLVWNFSS LYR WA FIVFVS RYYQE+S  
Sbjct: 361 THGEHWLKLCGSSWKLCSHKKGVFVAIFFLVWNFSSILYRVWAAFIVFVSVRYYQESSDR 420

Query: 421 DGWVRNGEAARHNDIVSVSSKLKRQY 429
           D WV+ GE    ND V+VSSKLKRQY
Sbjct: 421 DVWVKKGEVGPRNDTVTVSSKLKRQY 446

[Close]

BLAST of Sed0006701 vs. NCBI nr
Match: XP_008456496.1 (PREDICTED: reticulon-like protein B21 isoform X1 [Cucumis melo])

HSP 1 Score: 638.6 bits (1646), Expect = 3.7e-179
Identity = 339/447 (75.84%), Postives = 377/447 (84.34%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAP-AAVSSAVGG 60
           MDLSRRRA   A+GNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P  A S+A GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQL---- 120
           S RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+GSPNKPVQ+    
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAF 180
           TERNS+RK+T+ SRK  VG+TKP +NGI K S EKS           ISS+  QDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVI 240
           EE IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 IVSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVK 300
           I+S FIKNINISFIS+ISHMGL+YL AIFV+SSIFGR+K ID DDEN VVEEE++IRF K
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 QFVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKL 360
           + VP +NELL+N KALFRGD SATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKL
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ITHGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSK 420
           ITHGEHWLKLCGSSWKLCSHK+G+ VA+FFLVWNFSSTLYR WA FIV VSFRYYQE+ +
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420

Query: 421 GDGWVRNGEAARHNDIVSVSSKLKRQY 429
            D WV+NGE A  N+ VS SSKLKRQY
Sbjct: 421 RDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of Sed0006701 vs. NCBI nr
Match: KAA0063564.1 (reticulon-like protein B21 isoform X1 [Cucumis melo var. makuwa] >TYJ97890.1 reticulon-like protein B21 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 637.1 bits (1642), Expect = 1.1e-178
Identity = 338/447 (75.62%), Postives = 376/447 (84.12%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAP-AAVSSAVGG 60
           MDLSRRRA   A+GNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P  A S+A GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQL---- 120
           S RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+GSPNKPVQ+    
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAF 180
           TERNS+RK+T+ SRK  V +TKP +NGI K S EKS           ISS+  QDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVALTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVI 240
           EE IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 IVSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVK 300
           I+S FIKNINISFIS+ISHMGL+YL AIFV+SSIFGR+K ID DDEN VVEEE++IRF K
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 QFVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKL 360
           + VP +NELL+N KALFRGD SATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKL
Sbjct: 301 RLVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ITHGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSK 420
           ITHGEHWLKLCGSSWKLCSHK+G+ VA+FFLVWNFSSTLYR WA FIV VSFRYYQE+ +
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420

Query: 421 GDGWVRNGEAARHNDIVSVSSKLKRQY 429
            D WV+NGE A  N+ VS SSKLKRQY
Sbjct: 421 RDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of Sed0006701 vs. NCBI nr
Match: XP_004139257.1 (reticulon-like protein B18 isoform X1 [Cucumis sativus] >KGN60763.1 hypothetical protein Csa_019430 [Cucumis sativus])

HSP 1 Score: 625.9 bits (1613), Expect = 2.5e-175
Identity = 331/446 (74.22%), Postives = 372/446 (83.41%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAVGGS 60
           MDLSRRRA   AKGNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P   +SA  GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASA--GS 60

Query: 61  ARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLT---- 120
            RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+ SPNKPVQ++    
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAFE 180
           ERNS+RK+T+ SRK  VG+TKP +NGI K S EKS           ISS+  QDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVII 240
           E IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVII
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 VSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQ 300
           +S FIKNINIS IS+ISHMGL+YL  IFV+SSIFGR+K ID +DEN VVEEE++IRF K+
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKR 300

Query: 301 FVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLI 360
            VP +NELL+N KALFRGDPSATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKLI
Sbjct: 301 LVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKLI 360

Query: 361 THGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKG 420
           THGEHWLKLCGSSWKLCSHK+G+ +A+FFLVWNFSSTLYR WA FIV VSFRYYQE+ + 
Sbjct: 361 THGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPER 420

Query: 421 DGWVRNGEAARHNDIVSVSSKLKRQY 429
           D WV+NGE A  N  +S SSKLK+QY
Sbjct: 421 DVWVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of Sed0006701 vs. NCBI nr
Match: KAG6599344.1 (Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 604.7 bits (1558), Expect = 6.0e-169
Identity = 321/438 (73.29%), Postives = 363/438 (82.88%), Query Frame = 0


Query: 1   MDLSRRR--ATAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAV-GG 60
           MDL+R R  A A+GNVVAGSVWESRIRLDEVRGG++VFN DD + +   P A +S V GG
Sbjct: 40  MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 99

Query: 61  SARRKTWKSDEGFSSFLIAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNS 120
           S RRKTWKSDEGF+S LIAEEKPES SSGDEQSRKSPIP RRLRS+GSP KP + TERN 
Sbjct: 100 SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 159

Query: 121 SRKRTEPSRKPTVGITKPASNGIRKNSP------EKSISSAPPQDFFDAF-EEVIEKESF 180
           +RK+TE SRK  VG+TKP++N   K  P      EK+ISS P QDFFDAF EE IEKESF
Sbjct: 160 TRKKTEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEEIEKESF 219

Query: 181 DVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNI 240
           DVKEINLPERKKI  +TFP NKQ LQ L+DLIMWRD+SRS LVFGVGNLVII+ YF+KN+
Sbjct: 220 DVKEINLPERKKIGAETFPRNKQNLQRLLDLIMWRDISRSALVFGVGNLVIILCYFMKNM 279

Query: 241 NISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINEL 300
           NISFISVISHMGL+YLAAIFV+SS+FGR+KG+D DDE+  +EEEEVIRF K+ VP +N+L
Sbjct: 280 NISFISVISHMGLLYLAAIFVHSSVFGRRKGMDSDDEHYAIEEEEVIRFTKRLVPFLNQL 339

Query: 301 LRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLK 360
           L+N KALF GDPSATMKLGV LFVLA+WG+FITLWN++KCGF+G FT+PKLITHGE WL 
Sbjct: 340 LQNLKALFMGDPSATMKLGVTLFVLARWGNFITLWNVIKCGFIGVFTLPKLITHGEQWLT 399

Query: 361 LCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGDGWVRNGE 420
           LCGSSWKLCSHKK +AVALFFLVW+FSSTLYR WA F VFVSFRYYQE       V+NGE
Sbjct: 400 LCGSSWKLCSHKKAVAVALFFLVWSFSSTLYRVWAVFFVFVSFRYYQE-------VKNGE 459

Query: 421 AARHNDIVSVSSKLKRQY 429
            A  ND VSV SKLKRQY
Sbjct: 460 VAPKNDTVSVRSKLKRQY 470

[Close]

BLAST of Sed0006701 vs. ExPASy Swiss-Prot
Match: Q56X72 (Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 3.3e-53
Identity = 118/278 (42.45%), Postives = 166/278 (59.71%), Query Frame = 0


Query: 133 TKPASNGIRKNSP-----EKSISSAPPQDFFDAFEEVIEKESFDVKEINLPERKKIVEKT 192
           T P+ + +RK SP       S+ SAPP                     +  +R    E  
Sbjct: 178 TSPSPSSVRKISPPVIKRATSVYSAPP------------------NSTSSTDRFAEQEDN 237

Query: 193 FPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLA 252
           F  ++ KLQ+L+DL+MWRD+SRS LVFG G  +II S +  ++N SFISV+++MGL+YL 
Sbjct: 238 FTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLG 297

Query: 253 AIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMK 312
            +FV  S+  R    +   +   V EE+V R ++  +P +NE L   +ALF GDPS T+K
Sbjct: 298 LMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLK 357

Query: 313 LGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLI--------THGEHWLKLCGSSWKLC 372
           +GV+LFVLA+ GS ITLWNL K GF+G FT+PK+          +G  W++    +W+ C
Sbjct: 358 MGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESC 417

Query: 373 SHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQ 398
           +HKK +A+ALF LVWN SS   R WA F++ V+FRYYQ
Sbjct: 418 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

[Close]

BLAST of Sed0006701 vs. ExPASy Swiss-Prot
Match: Q6DR04 (Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-27
Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 196 QTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLAAIFVYSSI 255
           + + DL+MWRD+++S L FG G L  + S F K +N S  S +S++GLV L   F+ +++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 256 FGRKKGIDYDDENCV-VEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMKLGVLLFV 315
             RK   + D +    V E++V+R  ++ +P  N  +     LF G+PS T+K+   L +
Sbjct: 226 CQRK---NEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLL 285

Query: 316 LAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLK--------LCGSSWKLCSHKKGMA 375
            A++G  ITLW L   GF   FT+PKL +   H +           G +W +CSHKK +A
Sbjct: 286 GAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILA 345

Query: 376 VALFFLVWNFSSTLYRFWAGFIVFVSFRYYQE 399
            +     WN +S   R +A FI+ V FRY ++
Sbjct: 346 GSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQ 374

[Close]

BLAST of Sed0006701 vs. ExPASy Swiss-Prot
Match: Q8LDS3 (Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 5.7e-21
Identity = 94/360 (26.11%), Postives = 169/360 (46.94%), Query Frame = 0


Query: 75  IAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNSSRKRTEPSRKPTVGITK 134
           ++   P SP +  E    SP P+R+ R+  S    ++  E   + +R++        +  
Sbjct: 54  VSLSSPSSPVTLREILLLSPSPLRKSRTRLSNRFDMEAAEAAVTARRSKTKGGQNGLLAS 113

Query: 135 PASNGIRKNSPEKSISSAPPQDFFDAFEEVI----EKESFDVKEINLPERKKIVEKTFP- 194
           P+    R++     + S    D  +  E ++    EK+    K+  L   KK    + P 
Sbjct: 114 PSPRNFRRS----RLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPL 173

Query: 195 ----------------GNKQKL-QTLIDLIMWRDLSRSGLVFGVGNLVIIVSYF-IKNIN 254
                           G+ +++ + + DLIMWRD+++S L FG G +  + + F  K  N
Sbjct: 174 LASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFN 233

Query: 255 ISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELL 314
            S  S IS++GL++L   F+ +++  R++  +       + E++V+R  ++ +P+ N  +
Sbjct: 234 FSVFSAISYLGLLFLGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAI 293

Query: 315 RNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLKL 374
                LF G+P+ T+K+   + + A++G  ITLW L   GF   FT+PKL +     L  
Sbjct: 294 SKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQ 353

Query: 375 ---CG-----SSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGD 404
              C       +W +C+HKK +A +     WN +S   RF A FI+ V  RY ++  + D
Sbjct: 354 KVECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLD 407

[Close]

BLAST of Sed0006701 vs. ExPASy TrEMBL
Match: A0A1S3C3D4 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.8e-179
Identity = 339/447 (75.84%), Postives = 377/447 (84.34%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAP-AAVSSAVGG 60
           MDLSRRRA   A+GNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P  A S+A GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQL---- 120
           S RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+GSPNKPVQ+    
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAF 180
           TERNS+RK+T+ SRK  VG+TKP +NGI K S EKS           ISS+  QDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVI 240
           EE IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 IVSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVK 300
           I+S FIKNINISFIS+ISHMGL+YL AIFV+SSIFGR+K ID DDEN VVEEE++IRF K
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 QFVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKL 360
           + VP +NELL+N KALFRGD SATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKL
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ITHGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSK 420
           ITHGEHWLKLCGSSWKLCSHK+G+ VA+FFLVWNFSSTLYR WA FIV VSFRYYQE+ +
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420

Query: 421 GDGWVRNGEAARHNDIVSVSSKLKRQY 429
            D WV+NGE A  N+ VS SSKLKRQY
Sbjct: 421 RDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of Sed0006701 vs. ExPASy TrEMBL
Match: A0A5A7V8P0 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001050 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 5.2e-179
Identity = 338/447 (75.62%), Postives = 376/447 (84.12%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAP-AAVSSAVGG 60
           MDLSRRRA   A+GNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P  A S+A GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQL---- 120
           S RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+GSPNKPVQ+    
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAF 180
           TERNS+RK+T+ SRK  V +TKP +NGI K S EKS           ISS+  QDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVALTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVI 240
           EE IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 IVSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVK 300
           I+S FIKNINISFIS+ISHMGL+YL AIFV+SSIFGR+K ID DDEN VVEEE++IRF K
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 QFVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKL 360
           + VP +NELL+N KALFRGD SATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKL
Sbjct: 301 RLVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ITHGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSK 420
           ITHGEHWLKLCGSSWKLCSHK+G+ VA+FFLVWNFSSTLYR WA FIV VSFRYYQE+ +
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420

Query: 421 GDGWVRNGEAARHNDIVSVSSKLKRQY 429
            D WV+NGE A  N+ VS SSKLKRQY
Sbjct: 421 RDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of Sed0006701 vs. ExPASy TrEMBL
Match: A0A0A0LG57 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.2e-175
Identity = 331/446 (74.22%), Postives = 372/446 (83.41%), Query Frame = 0


Query: 1   MDLSRRRA--TAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAVGGS 60
           MDLSRRRA   AKGNVVAGSVWESRIR DEVRGGI+VFN DDE+ +   P   +SA  GS
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASA--GS 60

Query: 61  ARRKTWKSDEGFSSFLIAEEKPE-SPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLT---- 120
            RRKTWKSDEGF+  LIAEEKPE SPSSGDEQSRKSP P RRLRS+ SPNKPVQ++    
Sbjct: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKI 120

Query: 121 ERNSSRKRTEPSRKPTVGITKPASNGIRKNSPEKS-----------ISSAPPQDFFDAFE 180
           ERNS+RK+T+ SRK  VG+TKP +NGI K S EKS           ISS+  QDFFDAFE
Sbjct: 121 ERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFE 180

Query: 181 EVIEKESFDVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVII 240
           E IEKESFDVKEINLPERKKI+ +TFPGNKQKLQTL+DLIMWRD SRSGLVFGVGNLVII
Sbjct: 181 EEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVII 240

Query: 241 VSYFIKNINISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQ 300
           +S FIKNINIS IS+ISHMGL+YL  IFV+SSIFGR+K ID +DEN VVEEE++IRF K+
Sbjct: 241 LSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKR 300

Query: 301 FVPLINELLRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLI 360
            VP +NELL+N KALFRGDPSATMK+GVLLFVLAKWGSFITLWN+LK GF+G FT+PKLI
Sbjct: 301 LVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKLI 360

Query: 361 THGEHWLKLCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKG 420
           THGEHWLKLCGSSWKLCSHK+G+ +A+FFLVWNFSSTLYR WA FIV VSFRYYQE+ + 
Sbjct: 361 THGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPER 420

Query: 421 DGWVRNGEAARHNDIVSVSSKLKRQY 429
           D WV+NGE A  N  +S SSKLK+QY
Sbjct: 421 DVWVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of Sed0006701 vs. ExPASy TrEMBL
Match: A0A6J1KAN6 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493754 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.9e-169
Identity = 322/438 (73.52%), Postives = 364/438 (83.11%), Query Frame = 0


Query: 1   MDLSRRR--ATAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAV-GG 60
           MDL+R R  A A+GNVVAGSVWESRIRLDEVRGG++VFN DD + +   PAA +S V GG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNS 120
           S RRKTWKSDEGF+S LIAEEKPES SSGDEQSRKSPIP RRLRS+GSP KP + TERN 
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120

Query: 121 SRKRTEPSRKPTVGITKPASNGIRKNSP------EKSISSAPPQDFFDAFEEVIEKESFD 180
            RK+T+ SRK  VG+TKP++NG  K  P      EK+ISS P QDFFDAF+E IEKESFD
Sbjct: 121 MRKKTDQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSPPSQDFFDAFDEEIEKESFD 180

Query: 181 VKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNIN 240
           VKEINLPERKKI  +TFP NKQ LQ L+DLIMWRD+SRS LVFGVGNLVII+ YF+KN+N
Sbjct: 181 VKEINLPERKKIAAETFPRNKQILQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240

Query: 241 ISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELL 300
           ISFISVISHMGL+YLAAIFV+SSIFGR+KGID DDE+  +EEEEVIRF K+ VP +N+LL
Sbjct: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300

Query: 301 RNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLKL 360
           +N KALF GDPSATMKLGV LFVLA+WGSFITLWN++KCGF+G FT+PKLITHGE WL L
Sbjct: 301 QNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL 360

Query: 361 CGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGDGWVRNGEA 420
           CGSSWKLCSHKK +AVALFF+ W+FSSTLYR WA F VFVSF+YYQE       V+NGE 
Sbjct: 361 CGSSWKLCSHKKAVAVALFFIGWSFSSTLYRVWAVFFVFVSFQYYQE-------VKNGEV 420

Query: 421 ARHNDIVSV-SSKLKRQY 429
           A  ND VSV SSKLKRQY
Sbjct: 421 APKNDSVSVSSSKLKRQY 431

[Close]

BLAST of Sed0006701 vs. ExPASy TrEMBL
Match: A0A6J1G4A6 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450663 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.9e-169
Identity = 322/438 (73.52%), Postives = 363/438 (82.88%), Query Frame = 0


Query: 1   MDLSRRR--ATAKGNVVAGSVWESRIRLDEVRGGIRVFNADDESPQSEAPAAVSSAV-GG 60
           MDL+R R  A A+GNVVAGSVWESRIRLDEVRGG++VFN DD + +   P A +S V GG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60

Query: 61  SARRKTWKSDEGFSSFLIAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNS 120
           S RRKTWKSDEGF+S LIAEEKPE  SSGDEQSRKSPIP RRLRS+GSP KP +  ERN 
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPELSSSGDEQSRKSPIPARRLRSNGSPIKPGEKIERNP 120

Query: 121 SRKRTEPSRKPTVGITKPASNGIRKNSP------EKSISSAPPQDFFDAF-EEVIEKESF 180
           +RK+TE SRK  VG+TKP++NG  K  P      EK+ISS P QDFFDAF EE IEKESF
Sbjct: 121 TRKKTEQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSTPFQDFFDAFDEEEIEKESF 180

Query: 181 DVKEINLPERKKIVEKTFPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNI 240
           DVKEINLPERKKI  +TFP NKQ LQ L+DLIMWRD+SRS LVFGVGNLVII+ YF+KN+
Sbjct: 181 DVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240

Query: 241 NISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINEL 300
           NISFISVISHMGL+YLAAIFV+SSIFGR+KG+D DDE+  +EEEEVIRF K+ VP +N+L
Sbjct: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQL 300

Query: 301 LRNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLK 360
           L+N KALF GDPSATMKLGV LFVLA+WGSFITLWN++KCGF+G FT+PKLITHGE WL 
Sbjct: 301 LQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLT 360

Query: 361 LCGSSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGDGWVRNGE 420
           LCGSSWKLCSHKK +AVALFF+VW+FSSTLYR WA F VFVSFRYYQE       V+NGE
Sbjct: 361 LCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYYQE-------VKNGE 420

Query: 421 AARHNDIVSVSSKLKRQY 429
            A  ND VSVSSKLKRQY
Sbjct: 421 VAPKNDTVSVSSKLKRQY 431

[Close]

BLAST of Sed0006701 vs. TAIR 10
Match: AT5G58000.1 (Reticulon family protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-54
Identity = 118/278 (42.45%), Postives = 166/278 (59.71%), Query Frame = 0


Query: 133 TKPASNGIRKNSP-----EKSISSAPPQDFFDAFEEVIEKESFDVKEINLPERKKIVEKT 192
           T P+ + +RK SP       S+ SAPP                     +  +R    E  
Sbjct: 178 TSPSPSSVRKISPPVIKRATSVYSAPP------------------NSTSSTDRFAEQEDN 237

Query: 193 FPGNKQKLQTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLA 252
           F  ++ KLQ+L+DL+MWRD+SRS LVFG G  +II S +  ++N SFISV+++MGL+YL 
Sbjct: 238 FTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLG 297

Query: 253 AIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMK 312
            +FV  S+  R    +   +   V EE+V R ++  +P +NE L   +ALF GDPS T+K
Sbjct: 298 LMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLK 357

Query: 313 LGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLI--------THGEHWLKLCGSSWKLC 372
           +GV+LFVLA+ GS ITLWNL K GF+G FT+PK+          +G  W++    +W+ C
Sbjct: 358 MGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESC 417

Query: 373 SHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQ 398
           +HKK +A+ALF LVWN SS   R WA F++ V+FRYYQ
Sbjct: 418 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

[Close]

BLAST of Sed0006701 vs. TAIR 10
Match: AT2G20590.1 (Reticulon family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-28
Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 196 QTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLAAIFVYSSI 255
           + + DL+MWRD+++S L FG G L  + S F K +N S  S +S++GLV L   F+ +++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 256 FGRKKGIDYDDENCV-VEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMKLGVLLFV 315
             RK   + D +    V E++V+R  ++ +P  N  +     LF G+PS T+K+   L +
Sbjct: 226 CQRK---NEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLL 285

Query: 316 LAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLK--------LCGSSWKLCSHKKGMA 375
            A++G  ITLW L   GF   FT+PKL +   H +           G +W +CSHKK +A
Sbjct: 286 GAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILA 345

Query: 376 VALFFLVWNFSSTLYRFWAGFIVFVSFRYYQE 399
            +     WN +S   R +A FI+ V FRY ++
Sbjct: 346 GSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQ 374

[Close]

BLAST of Sed0006701 vs. TAIR 10
Match: AT4G28430.1 (Reticulon family protein )

HSP 1 Score: 103.6 bits (257), Expect = 4.0e-22
Identity = 94/360 (26.11%), Postives = 169/360 (46.94%), Query Frame = 0


Query: 75  IAEEKPESPSSGDEQSRKSPIPVRRLRSSGSPNKPVQLTERNSSRKRTEPSRKPTVGITK 134
           ++   P SP +  E    SP P+R+ R+  S    ++  E   + +R++        +  
Sbjct: 54  VSLSSPSSPVTLREILLLSPSPLRKSRTRLSNRFDMEAAEAAVTARRSKTKGGQNGLLAS 113

Query: 135 PASNGIRKNSPEKSISSAPPQDFFDAFEEVI----EKESFDVKEINLPERKKIVEKTFP- 194
           P+    R++     + S    D  +  E ++    EK+    K+  L   KK    + P 
Sbjct: 114 PSPRNFRRS----RLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPL 173

Query: 195 ----------------GNKQKL-QTLIDLIMWRDLSRSGLVFGVGNLVIIVSYF-IKNIN 254
                           G+ +++ + + DLIMWRD+++S L FG G +  + + F  K  N
Sbjct: 174 LASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFN 233

Query: 255 ISFISVISHMGLVYLAAIFVYSSIFGRKKGIDYDDENCVVEEEEVIRFVKQFVPLINELL 314
            S  S IS++GL++L   F+ +++  R++  +       + E++V+R  ++ +P+ N  +
Sbjct: 234 FSVFSAISYLGLLFLGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAI 293

Query: 315 RNFKALFRGDPSATMKLGVLLFVLAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLKL 374
                LF G+P+ T+K+   + + A++G  ITLW L   GF   FT+PKL +     L  
Sbjct: 294 SKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQ 353

Query: 375 ---CG-----SSWKLCSHKKGMAVALFFLVWNFSSTLYRFWAGFIVFVSFRYYQETSKGD 404
              C       +W +C+HKK +A +     WN +S   RF A FI+ V  RY ++  + D
Sbjct: 354 KVECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLD 407

[Close]

BLAST of Sed0006701 vs. TAIR 10
Match: AT2G20590.2 (Reticulon family protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-20
Identity = 57/159 (35.85%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 196 QTLIDLIMWRDLSRSGLVFGVGNLVIIVSYFIKNINISFISVISHMGLVYLAAIFVYSSI 255
           + + DL+MWRD+++S L FG G L  + S F K +N S  S +S++GLV L   F+ +++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 256 FGRKKGIDYDDENCV-VEEEEVIRFVKQFVPLINELLRNFKALFRGDPSATMKLGVLLFV 315
             RK   + D +    V E++V+R  ++ +P  N  +     LF G+PS T+K+   L +
Sbjct: 226 CQRK---NEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLL 285

Query: 316 LAKWGSFITLWNLLKCGFVGGFTVPKLITHGEHWLKLCG 354
            A++G  ITLW L   GF   FT+PKL +   H +   G
Sbjct: 286 GAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKG 321

The following BLAST results are available for this feature:

BLAST of Sed0006701 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890790.1	5.2e-181	75.78	reticulon-like protein B21 [Benincasa hispida] >XP_038890791.1 reticulon-like pr...	[more]
XP_008456496.1	3.7e-179	75.84	PREDICTED: reticulon-like protein B21 isoform X1 [Cucumis melo]	[more]
KAA0063564.1	1.1e-178	75.62	reticulon-like protein B21 isoform X1 [Cucumis melo var. makuwa] >TYJ97890.1 ret...	[more]
XP_004139257.1	2.5e-175	74.22	reticulon-like protein B18 isoform X1 [Cucumis sativus] >KGN60763.1 hypothetical...	[more]
KAG6599344.1	6.0e-169	73.29	Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0006701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X72	3.3e-53	42.45	Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2	[more]
Q6DR04	2.4e-27	35.38	Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1	[more]
Q8LDS3	5.7e-21	26.11	Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2	[more]

BLAST of Sed0006701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3D4	1.8e-179	75.84	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1	[more]
A0A5A7V8P0	5.2e-179	75.62	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A0A0LG57	1.2e-175	74.22	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G009500 PE=4 SV=1	[more]
A0A6J1KAN6	2.9e-169	73.52	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493754 PE=4 SV=1	[more]
A0A6J1G4A6	2.9e-169	73.52	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450663 PE=4 SV=1	[more]

BLAST of Sed0006701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58000.1	2.3e-54	42.45	Reticulon family protein	[more]
AT2G20590.1	1.7e-28	35.38	Reticulon family protein	[more]
AT4G28430.1	4.0e-22	26.11	Reticulon family protein	[more]
AT2G20590.2	2.2e-20	35.85	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 199..341 e-value: 3.3E-25 score: 88.9
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 198..341 score: 14.924762
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..151
None	No IPR available	PANTHER	PTHR46626:SF1	RETICULON-LIKE PROTEIN B21	coord: 186..385
None	No IPR available	PANTHER	PTHR46626:SF1	RETICULON-LIKE PROTEIN B21	coord: 1..183
IPR044647	Reticulon-like protein B17/18/21	PANTHER	PTHR46626	RETICULON-LIKE PROTEIN B17	coord: 1..183
IPR044647	Reticulon-like protein B17/18/21	PANTHER	PTHR46626	RETICULON-LIKE PROTEIN B17	coord: 186..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006701.1	Sed0006701.1	mRNA
Sed0006701.2	Sed0006701.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane