Sed0006694 (gene) Chayote v1

Overview


Name	Sed0006694
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-conjugating enzyme E2
Location	LG04: 46902510 .. 46904779 (-)
RNA-Seq Expression	Sed0006694
Synteny	Sed0006694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAAACCAGCTTTTTCTTATTTTTCTTCATCATTTTAATTGTCCTCACTAAAATCAAAAGCTTAAGAATTGCAAAAATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTGAATTAATTTGATTTTGGCCAACTTCATGTGAAAATTATATAAAAATATTATAAATGTGAAAGTGATAAAACTTGTCAAATTAAAAATAAAACATCTTCAAACTTGTTTGAATTTTGAAAATATTTATAAACAACAAACAACCAAACAAAAGAAGAGTTGGACATAGGCAAAAATAGTATTTATGAACTTATTTTTTAAAAATTGAAATAGTTATTGAACCAATATTGGTATTAGTTTTGATTTAAATTTTTGATATATTAAATGTGAATTTATGTTATGGTTTATTTTTCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTAAAAAATATTAATAATAAAAAATAATAAATAAACATTTTTGAAATATTCATTCAATTTGTATAAATTAAAATTCAAAAGTTCGAACCCGACAATCAGTATTTATTCTCCTAATATGTACTAAAAAAAGATTTATTATAAATTTGTATCATTAATATTTAGAGCTATTAGGATGGGTCTGATAATAATTTGATTTTTTTTTCTTTAAAAATTCACTTTATTTTTTTCAGTTTCTCTATTATAATTGTTATCGGTCTAAGAAACCATTTAGATACTTTTAGTTAAATTGTAAAAACAAAATAAAATTTTGAAAACACTTTTTTTTTGTTCAACTACAATTAACAAGGAAGATTTAAATATATGACCAAGACATCATGAAAATATATTTGATGTGCTCAATTACATTTTTTTTAGTTTCTAAAACATGAATTGTTTTTTTAAAAATGTGAACAAAACTAACAACAACAAAAAATGAAAATTGTATTTATAAACTTAATTTTAAAAACGAAAAAAATATGAAACGTGACTAGATTTTTATCATTTAGATTCAATGAGCTAAATATCCCTTGAAATGAAAAAAGAAAAAAACAAATGAATTAATTAATTGTTGCCTCTCATTTGATTTTGTTGAAAATTGATGGTGGTTGTAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTAAGTTATCTAATGTGTTGACGGCGGATTGATTATCTTAATTTCACGGTAATGAATTTAATTTTGAAAATCCATATTTGACTTTTATTTTGTTTGAGAACAATAATACCTTCTAGGTAAGATTTATAGTTTTCCACCTTCAATTTTTTTAAAAAATTTGCTCAAAATACCTAGAATACCCGCACCTATTTCGAGGGTCGTACTTAGAATACAGAAAATAAATATCTCCAAAAATTTTTAAAAAAATTAGGATTAAATATCATTCTGGTTCTTGAACTTTGAATTTTGTTTCATTTCGATCTCTATACATTCAAAAGTTTAATTTTAGTGTCTGAATTTTAACCAAAAATAATATTTTATCCTTCAAATTACTTTTACTTAAGCTTTCATTCTTAATTCTCCGTCAGTGTTGATAGTGGAGAACGTGGAGCATGAATAAATTAATATCCAAATTTAGTCTAATTTAATACTAATTATTTATTTTTGTAGGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAAAAATAATATCTCATATTTACTAAACATTAAACCCCAATTATTCTTAAACTTTGTATTGATTGAATCCCTTTTGCTTAGTCTCCTCATATCACTCTTTTTCTTTCTCTTTTTTATCATTTAGAAAAATAATGAATTATTGGTGGCCTAAAAATTGGGCTATTGGCATCGTATTTAAACTAACATACTTGCTCGGAATAATAATGATAAAATATATATCCCAAAAACTTTTGGAGCTTTATTTTCTTATTTAATTGATTTCAATACATGGAGAAAGAAATTCAGCTTTTTTTTTTAATTGAGCTAATACACCA

mRNA sequence

TAATAAACCAGCTTTTTCTTATTTTTCTTCATCATTTTAATTGTCCTCACTAAAATCAAAAGCTTAAGAATTGCAAAAATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAAAAATAATATCTCATATTTACTAAACATTAAACCCCAATTATTCTTAAACTTTGTATTGATTGAATCCCTTTTGCTTAGTCTCCTCATATCACTCTTTTTCTTTCTCTTTTTTATCATTTAGAAAAATAATGAATTATTGGTGGCCTAAAAATTGGGCTATTGGCATCGTATTTAAACTAACATACTTGCTCGGAATAATAATGATAAAATATATATCCCAAAAACTTTTGGAGCTTTATTTTCTTATTTAATTGATTTCAATACATGGAGAAAGAAATTCAGCTTTTTTTTTTAATTGAGCTAATACACCA

Coding sequence (CDS)

ATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKIDKDKYESTARNWTHKYAMG

Homology

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BLAST of Sed0006694 vs. NCBI nr
Match: PIA57421.1 (hypothetical protein AQUCO_00600267v1 [Aquilegia coerulea])

HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGP+AEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPIAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK D  KYESTARNWTHKYAMG
Sbjct: 121 PEIAHMCKTDTTKYESTARNWTHKYAMG 148

[Close]

BLAST of Sed0006694 vs. NCBI nr
Match: XP_022928354.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022928355.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022989069.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima] >XP_023529809.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >KAG7015272.1 hypothetical protein SDJN02_22907, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]

BLAST of Sed0006694 vs. NCBI nr
Match: KAF9622828.1 (hypothetical protein IFM89_034063 [Coptis chinensis])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPV EDMFHWQATIIGPNDSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAH+CK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHICKADKTKYESTARNWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. NCBI nr
Match: KAF9684490.1 (hypothetical protein SADUNF_Sadunf04G0123600 [Salix dunnii] >KAG5247934.1 ubiquitin-conjugating enzyme [Salix suchowensis])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPP+SCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPSSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHMCKADKIKYESTARNWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. NCBI nr
Match: XP_021603043.1 (ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG8655821.1 hypothetical protein MANES_04G076160v8 [Manihot esculenta])

HSP 1 Score: 306.2 bits (783), Expect = 1.5e-79
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMCKTDKIKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-79
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-78
Identity = 135/148 (91.22%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+N+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYE+TAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYE+TARNWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A2G5EP03 (UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00600267v1 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 8.7e-81
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGP+AEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPIAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK D  KYESTARNWTHKYAMG
Sbjct: 121 PEIAHMCKTDTTKYESTARNWTHKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A2N9ISK0 (UBC core domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55005 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.3e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMCKTDKTKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6J1ERH1 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111435208 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6J1JNB6 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111486252 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]

BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6N2M0D8 (UBC core domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242589 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPP+SCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPSSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHMCKADKIKYESTARNWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]

BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of Sed0006694 vs. NCBI nr


Match Name	E-value	Identity	Description
PIA57421.1	1.8e-80	96.62	hypothetical protein AQUCO_00600267v1 [Aquilegia coerulea]	[more]
XP_022928354.1	1.2e-79	95.95	ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022928355.1...	[more]
KAF9622828.1	1.2e-79	95.95	hypothetical protein IFM89_034063 [Coptis chinensis]	[more]
KAF9684490.1	1.2e-79	96.62	hypothetical protein SADUNF_Sadunf04G0123600 [Salix dunnii] >KAG5247934.1 ubiqui...	[more]
XP_021603043.1	1.5e-79	96.62	ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG86558...	[more]

BLAST of Sed0006694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35133	2.7e-79	92.57	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
P35132	2.7e-79	92.57	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
Q94F47	1.3e-78	91.22	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35135	3.9e-78	91.22	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35131	3.9e-78	91.22	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]

BLAST of Sed0006694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G5EP03	8.7e-81	96.62	UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_0060...	[more]
A0A2N9ISK0	4.3e-80	96.62	UBC core domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55005...	[more]
A0A6J1ERH1	5.6e-80	95.95	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JNB6	5.6e-80	95.95	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6N2M0D8	5.6e-80	96.62	UBC core domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS2425...	[more]

BLAST of Sed0006694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27960.1	1.9e-80	92.57	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	1.9e-80	92.57	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	1.9e-80	92.57	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.2	1.9e-80	92.57	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.4	1.9e-80	92.57	ubiquitin-conjugating enzyme 10	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 1.5E-76 score: 270.3
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 2.7E-52 score: 176.2
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 60.825405
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..142 e-value: 1.36464E-72 score: 212.062
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 5.3E-73 score: 245.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..147
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006694.1	Sed0006694.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity