Sed0006694 (gene) Chayote v1

Overview
NameSed0006694
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin-conjugating enzyme E2
LocationLG04: 46902510 .. 46904779 (-)
RNA-Seq ExpressionSed0006694
SyntenySed0006694
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATAAACCAGCTTTTTCTTATTTTTCTTCATCATTTTAATTGTCCTCACTAAAATCAAAAGCTTAAGAATTGCAAAAATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTGAATTAATTTGATTTTGGCCAACTTCATGTGAAAATTATATAAAAATATTATAAATGTGAAAGTGATAAAACTTGTCAAATTAAAAATAAAACATCTTCAAACTTGTTTGAATTTTGAAAATATTTATAAACAACAAACAACCAAACAAAAGAAGAGTTGGACATAGGCAAAAATAGTATTTATGAACTTATTTTTTAAAAATTGAAATAGTTATTGAACCAATATTGGTATTAGTTTTGATTTAAATTTTTGATATATTAAATGTGAATTTATGTTATGGTTTATTTTTCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTAAAAAATATTAATAATAAAAAATAATAAATAAACATTTTTGAAATATTCATTCAATTTGTATAAATTAAAATTCAAAAGTTCGAACCCGACAATCAGTATTTATTCTCCTAATATGTACTAAAAAAAGATTTATTATAAATTTGTATCATTAATATTTAGAGCTATTAGGATGGGTCTGATAATAATTTGATTTTTTTTTCTTTAAAAATTCACTTTATTTTTTTCAGTTTCTCTATTATAATTGTTATCGGTCTAAGAAACCATTTAGATACTTTTAGTTAAATTGTAAAAACAAAATAAAATTTTGAAAACACTTTTTTTTTGTTCAACTACAATTAACAAGGAAGATTTAAATATATGACCAAGACATCATGAAAATATATTTGATGTGCTCAATTACATTTTTTTTAGTTTCTAAAACATGAATTGTTTTTTTAAAAATGTGAACAAAACTAACAACAACAAAAAATGAAAATTGTATTTATAAACTTAATTTTAAAAACGAAAAAAATATGAAACGTGACTAGATTTTTATCATTTAGATTCAATGAGCTAAATATCCCTTGAAATGAAAAAAGAAAAAAACAAATGAATTAATTAATTGTTGCCTCTCATTTGATTTTGTTGAAAATTGATGGTGGTTGTAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTAAGTTATCTAATGTGTTGACGGCGGATTGATTATCTTAATTTCACGGTAATGAATTTAATTTTGAAAATCCATATTTGACTTTTATTTTGTTTGAGAACAATAATACCTTCTAGGTAAGATTTATAGTTTTCCACCTTCAATTTTTTTAAAAAATTTGCTCAAAATACCTAGAATACCCGCACCTATTTCGAGGGTCGTACTTAGAATACAGAAAATAAATATCTCCAAAAATTTTTAAAAAAATTAGGATTAAATATCATTCTGGTTCTTGAACTTTGAATTTTGTTTCATTTCGATCTCTATACATTCAAAAGTTTAATTTTAGTGTCTGAATTTTAACCAAAAATAATATTTTATCCTTCAAATTACTTTTACTTAAGCTTTCATTCTTAATTCTCCGTCAGTGTTGATAGTGGAGAACGTGGAGCATGAATAAATTAATATCCAAATTTAGTCTAATTTAATACTAATTATTTATTTTTGTAGGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAAAAATAATATCTCATATTTACTAAACATTAAACCCCAATTATTCTTAAACTTTGTATTGATTGAATCCCTTTTGCTTAGTCTCCTCATATCACTCTTTTTCTTTCTCTTTTTTATCATTTAGAAAAATAATGAATTATTGGTGGCCTAAAAATTGGGCTATTGGCATCGTATTTAAACTAACATACTTGCTCGGAATAATAATGATAAAATATATATCCCAAAAACTTTTGGAGCTTTATTTTCTTATTTAATTGATTTCAATACATGGAGAAAGAAATTCAGCTTTTTTTTTTAATTGAGCTAATACACCA

mRNA sequence

TAATAAACCAGCTTTTTCTTATTTTTCTTCATCATTTTAATTGTCCTCACTAAAATCAAAAGCTTAAGAATTGCAAAAATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAAAAATAATATCTCATATTTACTAAACATTAAACCCCAATTATTCTTAAACTTTGTATTGATTGAATCCCTTTTGCTTAGTCTCCTCATATCACTCTTTTTCTTTCTCTTTTTTATCATTTAGAAAAATAATGAATTATTGGTGGCCTAAAAATTGGGCTATTGGCATCGTATTTAAACTAACATACTTGCTCGGAATAATAATGATAAAATATATATCCCAAAAACTTTTGGAGCTTTATTTTCTTATTTAATTGATTTCAATACATGGAGAAAGAAATTCAGCTTTTTTTTTTAATTGAGCTAATACACCA

Coding sequence (CDS)

ATGGCATCCAAGAGAATATTGAAGGAGCTTAAAGACTTGCAAAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTGGCAGAGGATATGTTTCATTGGCAAGCAACTATAATTGGTCCAAATGATAGTCCCTATGCTGGTGGGGTTTTTCTTGTCACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACGAAGGTGTTTCATCCAAACATAAATAACAATGGCAACATATGCTTAGATATTCTTAAGGAACAATGGAGCCCAGCCCTCACAATATCAAAAGTTTTGCTGTCAATATGCTCCCTGTTAACAGATCCAAACCCAGATGATCCATTGGTACCTGAAATTGCTCACATGTGCAAGATTGACAAAGACAAATATGAATCCACTGCTAGGAATTGGACCCACAAATATGCAATGGGTTAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKIDKDKYESTARNWTHKYAMG
Homology
[Close]
BLAST of Sed0006694 vs. NCBI nr
Match: PIA57421.1 (hypothetical protein AQUCO_00600267v1 [Aquilegia coerulea])

HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGP+AEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPIAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK D  KYESTARNWTHKYAMG
Sbjct: 121 PEIAHMCKTDTTKYESTARNWTHKYAMG 148

[Close]
BLAST of Sed0006694 vs. NCBI nr
Match: XP_022928354.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022928355.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022989069.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima] >XP_023529809.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >KAG7015272.1 hypothetical protein SDJN02_22907, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]
BLAST of Sed0006694 vs. NCBI nr
Match: KAF9622828.1 (hypothetical protein IFM89_034063 [Coptis chinensis])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPV EDMFHWQATIIGPNDSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVGEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAH+CK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHICKADKTKYESTARNWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. NCBI nr
Match: KAF9684490.1 (hypothetical protein SADUNF_Sadunf04G0123600 [Salix dunnii] >KAG5247934.1 ubiquitin-conjugating enzyme [Salix suchowensis])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPP+SCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPSSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHMCKADKIKYESTARNWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. NCBI nr
Match: XP_021603043.1 (ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG8655821.1 hypothetical protein MANES_04G076160v8 [Manihot esculenta])

HSP 1 Score: 306.2 bits (783), Expect = 1.5e-79
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMCKTDKIKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-79
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-78
Identity = 135/148 (91.22%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+N+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYE+TAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 135/148 (91.22%), Postives = 143/148 (96.62%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K D+ KYE+TARNWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A2G5EP03 (UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00600267v1 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 8.7e-81
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGP+AEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPIAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK D  KYESTARNWTHKYAMG
Sbjct: 121 PEIAHMCKTDTTKYESTARNWTHKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A2N9ISK0 (UBC core domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55005 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.3e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMCKTDKTKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6J1ERH1 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111435208 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6J1JNB6 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111486252 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRT+VFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTRVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTAR+WTHKYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTHKYAMG 148

[Close]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match: A0A6N2M0D8 (UBC core domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS242589 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.6e-80
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPP+SCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPSSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHMCK DK KYESTARNWT KYAMG
Sbjct: 121 PEIAHMCKADKIKYESTARNWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 144/148 (97.30%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR WT KYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Sed0006694 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINNNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNIN+NG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKIDKDKYESTARNWTHKYAMG 149
           PEIAHM K DK+KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

The following BLAST results are available for this feature:
BLAST of Sed0006694 vs. NCBI nr
Match NameE-valueIdentityDescription
PIA57421.11.8e-8096.62hypothetical protein AQUCO_00600267v1 [Aquilegia coerulea][more]
XP_022928354.11.2e-7995.95ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_022928355.1... [more]
KAF9622828.11.2e-7995.95hypothetical protein IFM89_034063 [Coptis chinensis][more]
KAF9684490.11.2e-7996.62hypothetical protein SADUNF_Sadunf04G0123600 [Salix dunnii] >KAG5247934.1 ubiqui... [more]
XP_021603043.11.5e-7996.62ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG86558... [more]
BLAST of Sed0006694 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P351332.7e-7992.57Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
P351322.7e-7992.57SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
Q94F471.3e-7891.22Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
P351353.9e-7891.22Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P351313.9e-7891.22Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
BLAST of Sed0006694 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2G5EP038.7e-8196.62UBC core domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_0060... [more]
A0A2N9ISK04.3e-8096.62UBC core domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55005... [more]
A0A6J1ERH15.6e-8095.95ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JNB65.6e-8095.95ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6N2M0D85.6e-8096.62UBC core domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS2425... [more]
BLAST of Sed0006694 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27960.11.9e-8092.57ubiquitin conjugating enzyme 9 [more]
AT4G27960.21.9e-8092.57ubiquitin conjugating enzyme 9 [more]
AT5G53300.11.9e-8092.57ubiquitin-conjugating enzyme 10 [more]
AT5G53300.21.9e-8092.57ubiquitin-conjugating enzyme 10 [more]
AT5G53300.41.9e-8092.57ubiquitin-conjugating enzyme 10 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..147
e-value: 1.5E-76
score: 270.3
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 3..145
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..145
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..141
e-value: 2.7E-52
score: 176.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..147
score: 60.825405
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..142
e-value: 1.36464E-72
score: 212.062
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..148
e-value: 5.3E-73
score: 245.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..147
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006694.1Sed0006694.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016746 acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity