Sed0006692 (gene) Chayote v1

Overview


Name	Sed0006692
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein FAM33A
Location	LG13: 24393335 .. 24399710 (+)
RNA-Seq Expression	Sed0006692
Synteny	Sed0006692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATATCCCCCATCACCTCATCTGCTCTTTCATTTGAAAGAAAGCAAATACAGAATCCATTGGCGCCGAAGAAACTTCAAAAAATCGAGAGAGCGCGAAAACCCTAGCGGAGAGATCGAGAGAGAATGGGGGCCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCGAATCACGATCTCTCGTTGGTTCAGCACAGGCTCGAGAAGGAGTTTCAGGAAATCTATTCTGATAGCGTAAGAACAACTCGATCTTCTTCTTCTTCTTCATCTTCTCGTTTATTGAATTGATGAATTGATTGGATTTAGGATGAAGTTCTAGGGCTGGAATTGAATGTAGAATTGTTTAGATCTTTCTTTGCTGTTGGTATCTCATAGTTCTGGTGTCAGATCTTTGAGCTTAGAGTAGAATTATATCATTATCTCTTTCTTTTATCACAATCGAGGCACTATTTGGTTTGAGGATGAAGTTTCGAAATCTAGACCTGAATTTGAATGATTTCTTTCTCTCTTTGCTGTTATTTCACTGTGCTAACACAAGATCATGAGCTTAATGTATAATTATTCAATTCTACGGCGTAGGAGCCGGTAATCGATCCTGACAGCGTTAGAGCAACATAGATTTTTCTTCTTCTCCTTCTCAGTTGAGCCACTATTGAATTATTTCATTCTGCAGCATAAGAACAAGGAATCTGTCCTCGCAGAATTAGTGAAACATTGTTCTCTTTTGAGTCGAGGCACTATTTGGTTTTAGGAGGAAGTACTAGCTTTTCAGCATAATGTCGAATTGTTTCCTTCTCTCTTGCTTGGCAGTATTTCACTGTACAAATCAACAATTTGCTGTAGTTTTTTAATTTTAAAACGTTCATTTGCTTTAGAAACATTGTTGTTCTGAGAATGGAACGCATAGCTTTCTGGTTTAAGTTTTTGGAAAATTTGATGACCTGCAATTTCTCCTTATTAACGAAATTATGATTCAAAAAACATCTGATTAAAAATTTCCATGTTTTCATCGATAATATATGCAACTATGTTGACAGAAAGAGATCGTAAATCTTCGTTTGACGATTGAGACTAGAAATCCTGTTAGAACATGTAATGAGAACGAGACTGAAATTTATTTTGTGGTACGAAGTATACGTCTATTCAATACAAAGTTAATCACAGAATAATATAGAATTTAATCTCAATTTTTCTTCCAGATTCTTTTCGGAGAAAAATGAATACGAACCTGGTGTTGCTCAACTGGTGTTTTTCATTCAAGAGTTTGTCAATTGTTTGCAGGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGGAGTGTCGTGAAGTTTTGATGGCCAAGCAGGTACTTTTTTTATTTTACATTCTCCAGGTATTTTAGTGGAAACACGCCCATTTAAACTGCTTGAATTCGTGCTTTATGTTTGGTTGAAGTCTTTTTTCTTTTTCCATGTAATGAAATGTTAAGTATTATCTTAATAAAATGAATTTATGAAGTTTGATGATAATCGGATGAAATTTTTAGGTGGGTGAAAATGTGATTTAGATTTTTATTTATTTATAATAATAAAATTATATAGACAATACTTTGACTTATGTATTTGTTGGTTAGTATAATTAAATTTACTTCAATCCATGAGCTTAGGCTTTTGGATTGATTGGTGATTTAACATAATTCAACATGGTATCGGAGCAGGAGGTCATGAGTTCGAATCCCTGTCAAGTCATTTCATCCCCAATTAAAATTCAAGTCCACTTGTAGGGCATTTCTCAAATTTCAAAGCCCACAAGTGAGGGGGAGTGTTGGTTAGTATAATTAAATTTACTTCAATCCATGAGCTTAGGCTTTTGGATTGATTGGTGGTTTAACATAATTCAACACTATTAGAGAATATGAGGTTCAACCTCAAAACCAATTGGTAATGAGGGGAGTAACTCGTATCCTTTATAAATGTGTTGAAGAATCCTCACCTTATCAATGTGGGATAATTGCACCACAATGAGTATCTCCAACATGCCCCCTCAAGATGGTGGCCATATATTGGGAAATGTCATCTTGAATTGGATCCAAATTTGTGGCCGAAATACCCGCTTGGGTGGGGTCCACACCTGCTTTTTTGAATTCAAAGCATTTTTGGGTCGGATCAGAATTTGGGAGGACCAATAACCCACATGGGCTCTGATACCATATTAGAGAATATGAGGTTCAACCTCAAAATCAATTGGTAATGAGGGGAGTAACTCATATCCTTTATAAATGTGTTGAAGAATCCTCACCTTATCAATATGGGATAATTGCACCACAATGAGTATCTCCAACAGTATTACGGCACACTGAATTTTTAACGCTAATGCTGACTGCTGAGACTTGGACTGATAACCATTTATTTTTTTTTATTTTTGAAAAGTAAGTTTGTTTTCTCTTAATTTCTATACGATAGTTTTTGTCTCCCATAAAGAAGCATATCAAAATTAAATTTAAAAAGCAAAACAAGTTTTTTATAACTATTTTCTTTTTAGTTTTGATTTTTGAAGACACATGTAGATAGAATATAGCAGAACAAATCAACCAATTTTTATATCAATTATTTTTGTAGATCTAAAATGCCAATGCTTGATAGAACTTAGAAGCATTATAAACCTCTCTTGAAGGTAGGTTTGTATACTCTTGAACTTTATAAATGTCTTGATAGTTGATGCGTCTTTTGTTGTTTTATCGGACAACGAGTGAAAAAGACATTGATAATAGGAAGAACGCTCTGACATGCACAATATTTACTCTTGTTCTGGAACTGAGGTTGAGTGATCCCCATACCTATTGCTAAGTTTATGCGATGATGATGTGCTGTTCAAATGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTAGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGCCGATGATCCTGCATTTTCGCAATTCAAACAGGTATCCATTGCTAATGTCCCTTGGTTTTCATTTTGTGGTTAGTAGTACTAGTTCAACGCATCGATTATTCCGTGGCCCTAAGCCTGAATTGCGTTACTATGCTTATGCAAAGGATTGAAGCTTTTATATTTGATATCACCCAGCAAGTATTAAGCTTGTGCTTCTTGTTTGTGTCATTTTCCATTTATCACCTTCCCCAATGTAAGTAATGTGAGGGTACAATTGGGGCATTTAGAACTAAAATAATGCCAGGGTTACGTTTATATATTAGCTACAAGAAAGAATAAAGCCGTGAAATGGTCATTTAGCTCCCTTTTTTTTTCTCAATTGCTCTATCATCTGCTTTATTGTGATTTTAAAACGTTGTTATTTCAATCCATCCGTGGATTAAGTGGGTAAAAATTAATTTCTTACGAGTTATTTTGACCTTCATTAATATTAAAATGAAAATTGTACCACATATTCAAGATGCTAAAGGCTTTTCTTACGGGTGAATATCCACATTAGATGATGTAAGGGTACTTCGATCTTTTGGATAAAGCAAAGATCGAGCTTACATACTCAAATGTCTTACCATCTCCAAGTAAGAGTGTCATATTTTTTTTAGCAGTTGTAGAATTATTTTTGTAACCATCATGAAGTGGCCTAGAAAATCATTTCTTACAAATTTCTTTGACATCCAAATGTTGTAAGATCAGATAACAAATATATCTTATGAAAATAGTTGAGGTGGCGTAAACTGATCCAAACAGTCACTATATATATATAGGTCTCTAAACCATCATGGATATAAACGCTCAAGTGGCTAAATGAAGGCCTTAGAAACTATCGAAGTGTTCAGAGGGAACAAGGGCAATCTACAATTAAAATCAGGTGTTTAAATGAGGGCCTTGGAAACCGTCCAGTGTTAAGAGGGAGTAAGCTGTAAGGGCAATCCATAAAAATAAAAATTAGGACGTTCATTTGTTTTAATGATTTAGCGGTTAAATAAGGGGATTGGAAACCATCAATTGTTTAAAAGGATCAAGTTCAATCACATTAATGACATCTTTAGAAATTAATTTTTTACAAGTTCATAACTAAACGTAGTTCAGTCTGTCTTAATTGTCTTGTGAGATTAATCAGGTGTTCGTATGCAACATAGGTATACATAGATAATCATTGAATGTTTCTAAACAATATCCTGAATCTGTCTACTGCAGATCACTGAAGAGTGGACAGCACAAGTTCAATCAAAAATTGGTAAGGATTCTTTTCAAGCTTTATTCAAAATTTATTTTGCGGGTAAAGGCATGTGTAGTTCGTTACTTGCTGCTTGTTAAAATCAGTATTTACAATCTCAATTTAGAACCAATTTGAATTCTAACTTTCTACTTGTCTCTAAGGAGTGGCACCGTGGTTAAAAACTTAGTTTTTTAGAGTATACTCCCTTCAAGGTCCTGGATTCGAGACTCACTTGTGATATTACTCCTTCGATGTCTCCGGTGCTTAGCCTAGGGATGGGTGTGGTTACCCTTTGTTTCAAAAAAAATTCCAACTTTCCACCTCCCTAGCATACAAGTTACGACCCGTTAAACCATTGGTTACAGTTCTCTTGACCTTTTCTTGCACTTCGTGTTTAGACCTACTCTATCTTCTAAATCCTAGCTTACAATGTATTGAAAATATTGTTTGATTTTAAAATATGAAATCCGTTTCTAGATATTAATAAAAATAATGATTGATATCAGACTCTGTTGCGACGACCGTAAAAAGTTGCAGCGTAGAAACTAGAAGCTTTTTGTCTTCTTTTTTGGAAAACTAATTTCTAATAGCTGCCAATTGAATCCATAATTTCTTTAACTTCCCATAGATTTCTTGACTTTTAAGCTTCGTATTTGCTCACTTCGTTTAGAAGTTCTAAGTTACTCTTCTCACCCTCATTAACAATTGATTTTAAAATACAATCTCATGTTATTTAATATGATATCATAAGGCATCAAATTCAAGTGATATTTAATCCAACCTAAGTGAGTATAATATTATATTCACAAATTTCAATTTAACCTAAACATGTATAATTTGGATATGACTTAAGATTAGTGAACTAAAAAAGACATTATTTTGAGAAAGATCATCACTTGGTCTTATATTGGAAAATGAGTATGTTAGAAGTCTTCACTGCCTTTATATCTTTTTAAGAAACGCAGATTACTATCCTAATTATCAATCGGTTTTTGAGATAGAATTCTTGTTATTTAATAGTACTTCTTATATTGGAAAATGAGTATGTTACAAGACTTCAAAAGTACTTTTTTTTTTACATATCAATGTTTTTTAATATGAATGATCAACTTTCTCGCAGGTGAAGATGGCCAAGAGGACGCTGACTCTAATGACGTCAACAAGTTGCTATTCTCAGCTGTAGTACAGGCATAGTCCAAAGAGTTTCTCGGGGGAAAATTGTTGCACCTAAGTAAGCAGGTATCTAGTTAGTGAAATATTAAACTCTCTTGACAATCATTTAATTTTTTAATTTTAAATTTATTTTTACCCAAATTTTCTACGATAATATTCCATCTTTTCTATGATCTATCTTTCTTCTTTAAAAAAATATAAATCCCGACTAAATTTTAGAAACAGAAACTATTTTTTTGTTTTCAAATTTTGATTTAATTTCTAAAAACATATTCAAATAAGGAAAAATACATTGTAAATTAGTTGCTGTGATCTTAAATTTTAAAAATCAAAAATAAAATTGTTATAAAACAAGTATTAATTATCCACATTTTTATCAGTATTGTCAAATTTCTGAAGAATCCATGGCTAAGCAGAAAATTCAAACGATACAATAGCCATTATCTGAGGGCAAAAAATAATGAAAATTTTCCAAAATTTCTAGTTTAGTTATCCATTGCCTATTAAATATTAAAAAAATCGGATCTCAATTAAATATTTTAAAAAAAAAAAACTAATAATGACGGCAATGATTTATTTCCCCTGATAATTTACTCATTTTGTGTATGTGTGGTTTCTCTATGTTTCTTAGATTTTCTTCACCATCCTTCGTTCTGTTTGAAAAGAAACATTTGTGGAAACTGGAAAGTACAGAAATTTTGAAGAAAAATGATGGGTTTTCTGTGGTGAAGATGTGGCTTTTAGGGTTCAGATCTCATCGTACAGAAAGGTTTATGCTCTATTCAAATTGTGGCTTTTAAGTTCTCTTTCATTCTCGGTGCTCGTCTTATGAGCTGACTTCAACTCTCACAATATTTCAGTAATAATAGTAATATAGTTCCAAATGTGTGATTGCCACAAATATAATGGAACAAAACTCCAATTTCTTGATGTG

mRNA sequence

ATTCATATCCCCCATCACCTCATCTGCTCTTTCATTTGAAAGAAAGCAAATACAGAATCCATTGGCGCCGAAGAAACTTCAAAAAATCGAGAGAGCGCGAAAACCCTAGCGGAGAGATCGAGAGAGAATGGGGGCCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCGAATCACGATCTCTCGTTGGTTCAGCACAGGCTCGAGAAGGAGTTTCAGGAAATCTATTCTGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGGAGTGTCGTGAAGTTTTGATGGCCAAGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTAGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGCCGATGATCCTGCATTTTCGCAATTCAAACAGATCACTGAAGAGTGGACAGCACAAGTTCAATCAAAAATTGGTGAAGATGGCCAAGAGGACGCTGACTCTAATGACGTCAACAAGTTGCTATTCTCAGCTGTAGTACAGGCATAGTCCAAAGAGTTTCTCGGGGGAAAATTGTTGCACCTAAGTAAGCAGATTTTCTTCACCATCCTTCGTTCTGTTTGAAAAGAAACATTTGTGGAAACTGGAAAGTACAGAAATTTTGAAGAAAAATGATGGGTTTTCTGTGGTGAAGATGTGGCTTTTAGGGTTCAGATCTCATCGTACAGAAAGGTTTATGCTCTATTCAAATTGTGGCTTTTAAGTTCTCTTTCATTCTCGGTGCTCGTCTTATGAGCTGACTTCAACTCTCACAATATTTCAGTAATAATAGTAATATAGTTCCAAATGTGTGATTGCCACAAATATAATGGAACAAAACTCCAATTTCTTGATGTG

Coding sequence (CDS)

ATGGGGGCCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCGAATCACGATCTCTCGTTGGTTCAGCACAGGCTCGAGAAGGAGTTTCAGGAAATCTATTCTGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGGAGTGTCGTGAAGTTTTGATGGCCAAGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTAGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGCCGATGATCCTGCATTTTCGCAATTCAAACAGATCACTGAAGAGTGGACAGCACAAGTTCAATCAAAAATTGGTGAAGATGGCCAAGAGGACGCTGACTCTAATGACGTCAACAAGTTGCTATTCTCAGCTGTAGTACAGGCATAG

Protein sequence

MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQA

Homology

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BLAST of Sed0006692 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.9e-70
Identity = 139/155 (89.68%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. NCBI nr
Match: XP_038898183.1 (spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1 spindle and kinetochore-associated protein 2 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 8.8e-70
Identity = 139/156 (89.10%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           M  DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY +SANPMKLVSRIKKIRD
Sbjct: 1   MVLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNMLQK+QASMG PFVSD DDPAF++FKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKLQASMGVPFVSDLDDPAFAEFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQA 157
           TEEWT QVQSK GEDGQEDAD NDVNKLLFSAVVQA
Sbjct: 121 TEEWTRQVQSKFGEDGQEDADYNDVNKLLFSAVVQA 156

[Close]

BLAST of Sed0006692 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 138/155 (89.03%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+ +DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. NCBI nr
Match: XP_023534877.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-69
Identity = 138/155 (89.03%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNML KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. NCBI nr
Match: XP_022977128.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-68
Identity = 137/155 (88.39%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 139/155 (89.68%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. ExPASy TrEMBL
Match: A0A6J1IP41 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.0e-69
Identity = 137/155 (88.39%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQ 155

[Close]

BLAST of Sed0006692 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.2e-68
Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           MG  HLHQHHQAADGL NLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTL+E+CRE+LMAKQDVIDKARTVLV NRNMLQKMQASMG P VSD DD AF+QFK+I
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVV 155
           TEEWT QVQSKIG+DGQEDADSNDVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 154

[Close]

BLAST of Sed0006692 vs. ExPASy TrEMBL
Match: A0A6J1FBS9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 137/155 (88.39%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKI  DGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVVQ 153

[Close]

BLAST of Sed0006692 vs. ExPASy TrEMBL
Match: A0A6J1IQK7 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.9e-66
Identity = 135/155 (87.10%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRD 60
           M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQI 120
           DISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQASMGKPFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ 156
           TEEWT QVQSKI  DGQEDA+S+DVNKLLFSAVVQ
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVVQ 153

[Close]

BLAST of Sed0006692 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39
Identity = 79/148 (53.38%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 7   HQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLK 66
           + HHQA D L N+F++A+HDL++V  +L+KEFQ++Y  +ANPMKL+ RIKK+++D++ LK
Sbjct: 4   NHHHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDVTLLK 63

Query: 67  EECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDADDPAFSQFKQITEEWTA 126
            +C ++L AKQD+IDKA+T LV N N++QKM AS+G+    D DD A + F QI +EWT 
Sbjct: 64  HQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIIDEWTM 123

Query: 127 QVQSK-IGEDGQEDADSNDVNKLLFSAV 154
           QV+S+ +GE   EDAD  D+NK+LFSA+
Sbjct: 124 QVRSRTVGE--TEDADKEDINKMLFSAI 148

The following BLAST results are available for this feature:

BLAST of Sed0006692 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935897.1	3.9e-70	89.68	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_038898183.1	8.8e-70	89.10	spindle and kinetochore-associated protein 2 [Benincasa hispida] >XP_038898184.1...	[more]
KAG6591515.1	1.5e-69	89.03	hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534877.1	7.4e-69	89.03	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022977128.1	1.7e-68	88.39	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0006692 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6V9	1.9e-70	89.68	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]
A0A6J1IP41	8.0e-69	88.39	Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1	[more]
A0A6J1CJF1	5.2e-68	87.66	Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1	[more]
A0A6J1FBS9	1.2e-67	88.39	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]
A0A6J1IQK7	4.9e-66	87.10	Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1	[more]

BLAST of Sed0006692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24970.1	2.9e-39	53.38	unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.250.1380		coord: 10..124 e-value: 1.3E-25 score: 91.6
IPR042091	Ska2, N-terminal	PFAM	PF16740	SKA2	coord: 10..118 e-value: 1.5E-40 score: 137.5
IPR026762	Spindle and kinetochore-associated protein 2	PANTHER	PTHR32017	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	coord: 12..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006692.1	Sed0006692.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000940	outer kinetochore
cellular_component	GO:0005876	spindle microtubule
molecular_function	GO:0008017	microtubule binding