Sed0006544 (gene) Chayote v1

Overview


Name	Sed0006544
Type	gene
Organism	Sechium edule (Chayote v1)
Description	prefoldin subunit 6-like
Location	LG08: 38928319 .. 38932118 (-)
RNA-Seq Expression	Sed0006544
Synteny	Sed0006544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAAACACCCCATCTTCACAAGTGGTAGGTAAGTGCATCATTTAAAATTGTCGATCAACGGCGTCTCCGATCAGCCTTCGAGGAAGTCGGCGATTCAGCGATGAGTTCCTCAGGCGCTGTTCGAGATCTACAGCGCGAGCTGGAGACCAAAGCCAACGATCTCACCAAGCTTCAGAAAGGCAAGCCCCGTTTCCACTCTCTTCATACGATTCGCACCATTTTTTGAAACACATCAATAATTTCAGTTCCAATACTTTGTCGATCTGAAAACCCTAATTTGGTGATGGATTCTTCAGATATTGCCAAAAACCACCAAGTGAGGAAGAAATACACCATTCAACTGGGTGAGAACGAGCTCGTACTTAAGGTTTTGCCTTCCCCGTCGCTTGTCTTTCTCCTATTTTCAAGTTTGTGAATAGTTTAGGTCCCGTTTGATAATCATTTTGTTTTTCGTTTTTTGTTTATGAAATTTAAGCCTACAACAACTAACTTTTTCCTTATTTGGATATTTACATTTTAATAAGCAAAACCAAAATTTGTAAATAAAAAAAAGTAGTGTTTATGTTTTTTAAATTTGGTTAGTATTATACTACTTTCTTAAGGAAAGATGGATGCATGATAGAAATAGGCTTAAATTTCATAAACAAAAACAAAAAACAAAATGGTTATCAAATGGGGCCTTAGTAGTTTTGCATAAGTTTTTTTAATTTTTCGTACTTTCAACCTAGACATTCCTGCGTAATTATGAGGTTTTTTGTTTTACTTGATTTAAGATATGACTCAGTCCCCAAGGGATAGTCCGACGGTTGAGGTTAAGGGCAATGCATGCTTCCTTCTGGAAAACGTTTAAACTAAAATACCCTGGTGTCGCAGTCTAGGACGGACTAGTGGTGTCCCGGGTATATGGAAGCGAAGCTCCGATCTCCCGGTTTTCAAAAAAAAAAAAAAAGAAGCTCGGACCTGGAACACGTAGATGAGAGAACAAGTTTATTAAAACTAAAAATTTTAGAACTTTAAGTAAAACAAGTGGTGAAGAGCTTAAGAATTTCTATGAAATTCGTAAAAGAATGTGAGAAAAACTACATGCACAAGTAGATGAGAGAAAAGATAACGAAATACAGAATGTCAATCAATTGAGGCCGAGTTTTAAGAAAGTTTATATTGTGTACTCTCATAAAACTATTACAAATAAGCCCAAAATTACATAAATGATGAGGCAGCTAGACCCCAGACTAAATAATCATGATGCATCAAACAATTCAAGACATAACTTAGATGATGGAATTTATTTAAGTCTATAATCTGGATTCTGGTATACAATAAGAATTTGAAGCATTCTTATTAGTGGACATTTTTTTATCAGCATAATTCTTTGCTACTAGGTGTGAACTTGTTTTGTTTCTTGCTTTGCTTGCATACACAGGAATTGGATCTACTCCAAGATAACGCAAACGTTTATAAGCTAATTGGTCCAGTGCTAGTGAAGCAGGATCTAGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGTATGTGTTTCGTTTTTCTTTCCTTTTTGATTTTGTAGGTCATGCATAGTAGTGATTAGAATACCATAATAACAATCATTTGAAAACCTTCATCCAGCTATTTACTTGATGAGTTTTTTTAAGTGCATTCTGACTATTATGTAACTCTTATATCTCTCGATAATATTTATCTTTTAAGTTCTACAATAATTAGGGTGGGAGGATTCAAACCTATGATCCCTTAGTCATTGGGTATACATTGATGTTGAGTTGAATTATTGCCCTGTTATCAAGTTGTTGCCTTGTTTTAAACGAGGTGTTTTTACCTTTTGGATGGCTCTAGCTTGCCATTATTGATTGTATTATGAACTCTGTATATGTTGAAACTATGTTGCATGTTTCGGGAAGCTATATGAAGGAGAAAAGATTGAGCTGATTGATTTGGATTTTGTCCTTCCCAATTAACAACCCCCTTGCGACCTAAGAGTATCGACTTATACGTTCTTGCCAAGCATACTTCTTGAAACATTAGCCATGATTGTGAAAATTGAAAAGTAAGGGAGCAAGTGAAACACCGTGTTGACAGCTTTTAAAGGCTTGATAAGACCCACATGCTTATTTTATTGTTGAGAAAGATGGAAAACAAATGTGAGCGATGCAAACATGCCTTCAAGATCCTCATTTGGAGCCAAACTCTTTCTTTCCAAGAACCTTAAGAAAATTTTGGTCTATCATGTATCAAACCTTTTCAAAGTCAATTTTCGTGTCCCACCTACTGACAAAGATGACAACCTTTTACCTGAATCTTCACATTGGTATGATATTGCCTTGAGATACACCCTCACGACTTGTTTTTTGTTTCACCCAAAAAGCCCCAAACCAACAAAAATGATTGTCATCACTTATATACCCATGATCCCTCGTCTAACCAATGTGAAAGAACATTGTTTGCATCCCAATACCTACCAACATGAGTATAACTTAGCATCTAAAACATATACTCCTTCACAACAAAGCATATCATTCACACATATACTTGCATTTTAGTCTTGATCATTCACACATATCCTTGCATTTTAGTCTTGATCATTCACATCAATCCTCTTCCATATACCTTAATAATAGTGATGTTATAGTTTTCTTTTACCAGTCACCATTTTCATGTGTTTTAATTCAACGATGTTTGCACAATTCAGGAAACGTCTTGATTCAACCCTCCAAGATTTGGAAGAGAAGCAAAACAGCAAGAGAGATGCGGTTTGTACTTTCCATACCTCTATTGATCTTAAAGCTAACCCATTGGCTGATATTTGCAGGACCTCAAAAAAAAAGCAATACAACAATTTTATTTTGTGCTTGATTCTTTCTCGTTTCTATGGTGGTCAGATGCTTCTTAGGATTAGGAGTCATCGTAAAGAGGATGAGAATGGGGTGGGGGGATGTTGGCCATGGTTTCCAGTGAGGGTGGCGGATGGGTTTTTGACGGTGGAGAGGAAAGGAGAGAGAGAAATAAGCCATTATCGGTTGAATTTATGAGTAGTTGTACTCTCTTCGAAGAGTTTGTGCCTTGTGATCCCCCTCCCCCAAATTGTACTAAAAAAAATCCATATGGAATGAATTCTAACATTTTTTTTAACCATATAGATCAAATTTGTAATTTAACTCATTCCAATAGGTTTTCTCATATTTCAGAACAATGGATTGGTTGGTTTGGTTTAGTAACTTTTCTACTGTAACTATAACTACCAAAATACTCTGCAAATTAATTACTTATTGTTGGTTTTCTGTTTTGCAGATATTGAAGTTACAGCAGAGAAGTCAATCTCTGCAGGCTGGAAAAGCTAAGGCGTAACTTGTTTATCGTTGTTTTTCAACCGTACGTCCTAAACTTCTGTTTATATATTTGCAATGTTGTACCAGTTAAAGATGCACTGCTCGCTCACCTGAACGTTTAACGTTCTTTTAATTGTTTCAATTTTGATAATTGATTTGTGCATTGTCTGTTGGTTTATATTTCTTGGGAGAACTTGACATCTCCAAATAGTATTTAGCATTTGTTATTTGGCATCTTGAAGGAAGAAGTATTTGTGGTAACTAAATTGCTTCTGAATTTCAAGGGTTGTGTCTGCCACACTTTAGTCTAAATGGACTTTTTGCCATAGATTGTATTTGCTTGTCTTTTTCTTGAAGAGGGAGCTCATGTGTACACATGAGTACTGAAACGGGCCTTATAGATTACTGTAATTTTATTTGATTTCGATCCATTTTTCAC

mRNA sequence

ACCAAACACCCCATCTTCACAAGTGGTAGGTAAGTGCATCATTTAAAATTGTCGATCAACGGCGTCTCCGATCAGCCTTCGAGGAAGTCGGCGATTCAGCGATGAGTTCCTCAGGCGCTGTTCGAGATCTACAGCGCGAGCTGGAGACCAAAGCCAACGATCTCACCAAGCTTCAGAAAGATATTGCCAAAAACCACCAAGTGAGGAAGAAATACACCATTCAACTGGGTGAGAACGAGCTCGTACTTAAGGAATTGGATCTACTCCAAGATAACGCAAACGTTTATAAGCTAATTGGTCCAGTGCTAGTGAAGCAGGATCTAGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGAAACGTCTTGATTCAACCCTCCAAGATTTGGAAGAGAAGCAAAACAGCAAGAGAGATGCGATATTGAAGTTACAGCAGAGAAGTCAATCTCTGCAGGCTGGAAAAGCTAAGGCGTAACTTGTTTATCGTTGTTTTTCAACCGTACGTCCTAAACTTCTGTTTATATATTTGCAATGTTGTACCAGTTAAAGATGCACTGCTCGCTCACCTGAACGTTTAACGTTCTTTTAATTGTTTCAATTTTGATAATTGATTTGTGCATTGTCTGTTGGTTTATATTTCTTGGGAGAACTTGACATCTCCAAATAGTATTTAGCATTTGTTATTTGGCATCTTGAAGGAAGAAGTATTTGTGGTAACTAAATTGCTTCTGAATTTCAAGGGTTGTGTCTGCCACACTTTAGTCTAAATGGACTTTTTGCCATAGATTGTATTTGCTTGTCTTTTTCTTGAAGAGGGAGCTCATGTGTACACATGAGTACTGAAACGGGCCTTATAGATTACTGTAATTTTATTTGATTTCGATCCATTTTTCAC

Coding sequence (CDS)

ATGAGTTCCTCAGGCGCTGTTCGAGATCTACAGCGCGAGCTGGAGACCAAAGCCAACGATCTCACCAAGCTTCAGAAAGATATTGCCAAAAACCACCAAGTGAGGAAGAAATACACCATTCAACTGGGTGAGAACGAGCTCGTACTTAAGGAATTGGATCTACTCCAAGATAACGCAAACGTTTATAAGCTAATTGGTCCAGTGCTAGTGAAGCAGGATCTAGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGAAACGTCTTGATTCAACCCTCCAAGATTTGGAAGAGAAGCAAAACAGCAAGAGAGATGCGATATTGAAGTTACAGCAGAGAAGTCAATCTCTGCAGGCTGGAAAAGCTAAGGCGTAA

Protein sequence

MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKAKA

Homology

[Close]

BLAST of Sed0006544 vs. NCBI nr
Match: XP_023541350.1 (prefoldin subunit 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-54
Identity = 120/130 (92.31%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+  +R+LQRELETKANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+D+AN
Sbjct: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQRS
Sbjct: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. NCBI nr
Match: XP_038895368.1 (prefoldin subunit 6 [Benincasa hispida] >XP_038895369.1 prefoldin subunit 6 [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 9.6e-54
Identity = 120/130 (92.31%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+ A+R+LQRELETKANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL D+AN
Sbjct: 1   MSSTSALRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           VYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQDLEEKQNSKRDAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. NCBI nr
Match: XP_022994921.1 (prefoldin subunit 6-like [Cucurbita maxima])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 119/130 (91.54%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+  +R+LQRELE+KANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+D+AN
Sbjct: 1   MSSTSVLRELQRELESKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQRS
Sbjct: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. NCBI nr
Match: XP_023001490.1 (prefoldin subunit 6-like [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 119/129 (92.25%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+ AVR+LQRELETKANDL+KLQKDIAKNHQ+RKKYTIQLGENELVLKEL+LL+D+AN
Sbjct: 1   MSSTSAVRELQRELETKANDLSKLQKDIAKNHQIRKKYTIQLGENELVLKELNLLKDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRI 120

Query: 121 QSLQAGKAK 130
           QSLQAGKAK
Sbjct: 121 QSLQAGKAK 129

[Close]

BLAST of Sed0006544 vs. NCBI nr
Match: XP_022954700.1 (prefoldin subunit 6-like [Cucurbita moschata] >KAG6573354.1 Prefoldin subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 119/130 (91.54%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+  +R+LQRELE+KANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+D+AN
Sbjct: 1   MSSTTVLRELQRELESKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQRS
Sbjct: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot
Match: Q17Q89 (Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 10  LQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL  +  V+KL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE++   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot
Match: Q5TJE6 (Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 10  LQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL  +  V+KL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot
Match: O15212 (Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 0


Query: 10  LQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL  +  V+KL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot
Match: Q03958 (Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 10  LQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL  +  V+KL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKA 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123

[Close]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot
Match: P52554 (Probable prefoldin subunit 6 OS=Caenorhabditis elegans OX=6239 GN=pfd-6 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 44/118 (37.29%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 13  ELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVYKLIGPVLVKQ 72
           + E + N L  L+KD  K    R++  ++L E++ V  ELDL++ ++ VYKLIG VLV+Q
Sbjct: 6   KFEEEVNKLRTLEKDREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQ 65

Query: 73  DLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQSLQAGKAKA 131
           DL EA + V KR+++I +E KR+++++ D+ +K   +RD ++ +Q+  Q +    A+A
Sbjct: 66  DLEEARSTVEKRLEFIDSETKRVEASISDISKKCTEQRDKVMNMQKSFQMMAQAAAQA 123

[Close]

BLAST of Sed0006544 vs. ExPASy TrEMBL
Match: A0A6J1K0L9 (prefoldin subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111490501 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.1e-54
Identity = 119/130 (91.54%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+  +R+LQRELE+KANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+D+AN
Sbjct: 1   MSSTSVLRELQRELESKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQRS
Sbjct: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. ExPASy TrEMBL
Match: A0A6J1KLC2 (prefoldin subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495611 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.9e-54
Identity = 119/129 (92.25%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+ AVR+LQRELETKANDL+KLQKDIAKNHQ+RKKYTIQLGENELVLKEL+LL+D+AN
Sbjct: 1   MSSTSAVRELQRELETKANDLSKLQKDIAKNHQIRKKYTIQLGENELVLKELNLLKDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRI 120

Query: 121 QSLQAGKAK 130
           QSLQAGKAK
Sbjct: 121 QSLQAGKAK 129

[Close]

BLAST of Sed0006544 vs. ExPASy TrEMBL
Match: A0A6J1GT51 (prefoldin subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111456879 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 119/130 (91.54%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+  +R+LQRELE+KANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+D+AN
Sbjct: 1   MSSTTVLRELQRELESKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQRS
Sbjct: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. ExPASy TrEMBL
Match: A0A6J1CEX4 (prefoldin subunit 6-like OS=Momordica charantia OX=3673 GN=LOC111010879 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MSS+ A+R+LQRELE KAN+L+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL D+AN
Sbjct: 1   MSSASALRELQRELEAKANELSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNDDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDS LQDLEEKQNSKRDAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. ExPASy TrEMBL
Match: A0A059C611 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E02397 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.0e-53
Identity = 118/130 (90.77%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MSSSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNAN 60
           MS+S A+RDLQR+LE KANDL+KLQKDIAKNHQVRKKYTIQLGENELVLKELDLL ++AN
Sbjct: 1   MSTSSALRDLQRDLENKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDAN 60

Query: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRS 120
           VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLD+TLQDLEEKQNSKRD ILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKRDMILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]

BLAST of Sed0006544 vs. TAIR 10
Match: AT1G29990.1 (prefoldin 6 )

HSP 1 Score: 201.4 bits (511), Expect = 4.3e-52
Identity = 106/128 (82.81%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 3   SSGAVRDLQRELETKANDLTKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDNANVY 62
           SS  VRDLQR+LE KANDL K+QKDI KNHQ+RKKYTIQLGENELVLKELDLL+++ANVY
Sbjct: 2   SSSTVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVY 61

Query: 63  KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSTLQDLEEKQNSKRDAILKLQQRSQS 122
           KLIGPVLVKQDLAEANANVRKRI+YISAELKRLD+ LQD+EEKQN+KR+ I+KLQQR Q+
Sbjct: 62  KLIGPVLVKQDLAEANANVRKRIEYISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQT 121

Query: 123 LQAGKAKA 131
           +QAGKAKA
Sbjct: 122 IQAGKAKA 129

The following BLAST results are available for this feature:

BLAST of Sed0006544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541350.1	4.3e-54	92.31	prefoldin subunit 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_038895368.1	9.6e-54	92.31	prefoldin subunit 6 [Benincasa hispida] >XP_038895369.1 prefoldin subunit 6 [Ben...	[more]
XP_022994921.1	1.3e-53	91.54	prefoldin subunit 6-like [Cucurbita maxima]	[more]
XP_023001490.1	1.6e-53	92.25	prefoldin subunit 6-like [Cucurbita maxima]	[more]
XP_022954700.1	2.1e-53	91.54	prefoldin subunit 6-like [Cucurbita moschata] >KAG6573354.1 Prefoldin subunit 6,...	[more]

BLAST of Sed0006544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q17Q89	1.1e-20	47.11	Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1	[more]
Q5TJE6	1.9e-20	47.11	Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1	[more]
O15212	1.9e-20	47.11	Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1	[more]
Q03958	2.5e-20	47.06	Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1	[more]
P52554	1.2e-14	37.29	Probable prefoldin subunit 6 OS=Caenorhabditis elegans OX=6239 GN=pfd-6 PE=2 SV=...	[more]

BLAST of Sed0006544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K0L9	6.1e-54	91.54	prefoldin subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111490501 PE=3 SV=1	[more]
A0A6J1KLC2	7.9e-54	92.25	prefoldin subunit 6-like OS=Cucurbita maxima OX=3661 GN=LOC111495611 PE=3 SV=1	[more]
A0A6J1GT51	1.0e-53	91.54	prefoldin subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111456879 PE=3 SV=1	[more]
A0A6J1CEX4	1.8e-53	91.54	prefoldin subunit 6-like OS=Momordica charantia OX=3673 GN=LOC111010879 PE=3 SV=...	[more]
A0A059C611	3.0e-53	90.77	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E02397 PE=3 SV...	[more]

BLAST of Sed0006544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29990.1	4.3e-52	82.81	prefoldin 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..119
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	PANTHER	PTHR21431	PREFOLDIN SUBUNIT 6	coord: 5..130
None	No IPR available	CDD	cd00632	Prefoldin_beta	coord: 14..118 e-value: 1.82803E-17 score: 70.1085
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 14..118
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 7..125 e-value: 1.9E-31 score: 110.2
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 17..118 e-value: 4.5E-21 score: 74.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006544.1	Sed0006544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0043622	cortical microtubule organization
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051082	unfolded protein binding