Sed0006501 (gene) Chayote v1

Overview
NameSed0006501
Typegene
OrganismSechium edule (Chayote v1)
DescriptionGlucose-fructose oxidoreductase domain-containing protein 2, putative
LocationLG14: 22886246 .. 22887685 (+)
RNA-Seq ExpressionSed0006501
SyntenySed0006501
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTTTGTAGGCTCTCTGCCCACAGTAACTGCTCTTTCTCTGTCTTTATCTCTGTAAGTTGATGGAATTTGAGAATTCCAACATAACTCCAACCAGAAAAGGCTGATCATCCAAAAGATTACACTTTGCTCTTTGCCTTTGCCTTTGCCCTTCTCTCTTATTTCTTGCTCTCCTCTTGTATTCAAAAAGGAGAAATCTTCTTTTGTTTCTTTAATTCTGACACTCCTCCATAACCCCTTGATTGCAACCTCTTTATAATCCCCCTCAAATACCCTGAAAAACATCACAACAAACACTTCATTTCAAGGCCTTTTTGGGATTAGTAACAAATTTTTTTAGAGTTTAGAGAGTTTGAAGAAGTTGTATAAATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGTGTTGGTACTGAAACTCTTGCAAAGATTCAAACTTGTTCTAATTTGAATCACTCTGCCATGTGTGTTTTTGTACTTTTGGTGAAATCTGAGTGAATTTTTCTTGATTGACTCTTTGCTTGTTCTTTTTTCTTTTGGATTCTTGATTAGAAACCTTCTAGTTTCATTTTTGTACATCTATGCTTGTGCTATGATCTTCAAATATTAATTGGGTTTGTTTTGAGAGGAAAAACTTATACTAAGGTTATGATTTTCATCCTTGATTCATCACTCAACTTCTCATAACTATTTTGCTTCTGATTGTCATCCTTGGGGAAATCTCAGTGTATAGTATTCACTAATTTACTTTTGCAAAAGTTTTTTGTTACAATCTCATAACTATTTTACTTCTGATTGCCATCTCTGTGATTAAGCAAAAGTTTTTTTTTTAGATGAAATTGATAAGAACTTTTGCTTCTGAATTCTTGATTAGAAGAGAAACCATTTTGTTGCATTTTTGTACATCTATGCTTGTGGTATGATCTTCAATATTAATTGGTTTTATTTGTGAAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGACTTGGGGACGGACGTGGTTGAACACGGACATAGTAGAGTGAAACTATGATATCCCGGTTTCCGAAAAAAAATAAACTTTTGATTGTCATCCTTGAGGCAATCTCAGTTTATGGTATTAACTAATTAGTTTTGCAGATAACCCCAGTTCTAGGGTAAGCAAAAGTTCATTTTTTCTTTCTAACAGATGAAATTGAAGATAACTCTGTGACAATCTTTTGCCAAAAGTTGTAAGAGCACAAAAACAGATGAGAAAGAAGATGAAGGAATG

mRNA sequence

GTCTTTGTAGGCTCTCTGCCCACAGTAACTGCTCTTTCTCTGTCTTTATCTCTGTAAGTTGATGGAATTTGAGAATTCCAACATAACTCCAACCAGAAAAGGCTGATCATCCAAAAGATTACACTTTGCTCTTTGCCTTTGCCTTTGCCCTTCTCTCTTATTTCTTGCTCTCCTCTTGTATTCAAAAAGGAGAAATCTTCTTTTGTTTCTTTAATTCTGACACTCCTCCATAACCCCTTGATTGCAACCTCTTTATAATCCCCCTCAAATACCCTGAAAAACATCACAACAAACACTTCATTTCAAGGCCTTTTTGGGATTAGTAACAAATTTTTTTAGAGTTTAGAGAGTTTGAAGAAGTTGTATAAATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGACTTGGGGACGGACGTGGTTGAACACGGACATAGTAGAGTGAAACTATGATATCCCGGTTTCCGAAAAAAAATAAACTTTTGATTGTCATCCTTGAGGCAATCTCAGTTTATGGTATTAACTAATTAGTTTTGCAGATAACCCCAGTTCTAGGGTAAGCAAAAGTTCATTTTTTCTTTCTAACAGATGAAATTGAAGATAACTCTGTGACAATCTTTTGCCAAAAGTTGTAAGAGCACAAAAACAGATGAGAAAGAAGATGAAGGAATG

Coding sequence (CDS)

ATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGA

Protein sequence

MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFCKFEGKTDPMVLIVILHSSLLHFGV
Homology
BLAST of Sed0006501 vs. NCBI nr
Match: KAF3451534.1 (hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis])

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17
Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFCK 60
          MG + SL W+N YSR+    LFWRVRAA+KKA+KN GK Q +FQYDPCSYALNFDDG CK
Sbjct: 5  MGLIASLVWVNTYSRKHCRSLFWRVRAALKKAVKNGGKQQIRFQYDPCSYALNFDDGGCK 64

Query: 61 F-EGKTDP 68
            E +T P
Sbjct: 65 LGEAQTTP 72

BLAST of Sed0006501 vs. NCBI nr
Match: QCD76710.1 (hypothetical protein DEO72_LG1g331 [Vigna unguiculata] >QCD76711.1 hypothetical protein DEO72_LG1g332 [Vigna unguiculata])

HSP 1 Score: 95.5 bits (236), Expect = 2.3e-16
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFC- 60
          MGF+  LEW+N YS++R   LFWR+RAA+KKA+KN GK + KFQYDP SYALNFDDGFC 
Sbjct: 1  MGFLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 --KFEGKTDPMVL 71
            KF G    M L
Sbjct: 61 AKKFIGDARLMEL 73

BLAST of Sed0006501 vs. NCBI nr
Match: EEF40896.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAI-KNRGKPQFKFQYDPCSYALNFDDGFC 60
          MGF+GSLEW+NN+S+++   LFWRVRAA+KKA+ KN GK Q KFQYDP SYALNFDDG C
Sbjct: 5  MGFIGSLEWVNNFSKKQCKSLFWRVRAAVKKAVKKNGGKQQVKFQYDPSSYALNFDDGGC 64

BLAST of Sed0006501 vs. NCBI nr
Match: OAY24759.1 (hypothetical protein MANES_17G041400v8 [Manihot esculenta])

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-16
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFCK 60
          MG +G LEWMN++S+++   LFWRV+AA+KKA+KN GK Q  FQYDP SYALNFDDG C 
Sbjct: 1  MGLIGRLEWMNSFSKKQCKSLFWRVKAAVKKAVKNGGKQQVNFQYDPSSYALNFDDGCCH 60

Query: 61 F 62
          F
Sbjct: 61 F 61

BLAST of Sed0006501 vs. NCBI nr
Match: XP_007148211.1 (hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris] >ESW20205.1 hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFC- 60
          MG +  LEW+N YS++R   LFWR+RAA+KKA+KN GK + KFQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 --KFEGKTDPMVL 71
            KF G    M L
Sbjct: 61 AKKFIGDARLMEL 73

BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: A0A4D6KJL7 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g331 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFC- 60
          MGF+  LEW+N YS++R   LFWR+RAA+KKA+KN GK + KFQYDP SYALNFDDGFC 
Sbjct: 1  MGFLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 --KFEGKTDPMVL 71
            KF G    M L
Sbjct: 61 AKKFIGDARLMEL 73

BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: B9S5Y7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1062440 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAI-KNRGKPQFKFQYDPCSYALNFDDGFC 60
          MGF+GSLEW+NN+S+++   LFWRVRAA+KKA+ KN GK Q KFQYDP SYALNFDDG C
Sbjct: 5  MGFIGSLEWVNNFSKKQCKSLFWRVRAAVKKAVKKNGGKQQVKFQYDPSSYALNFDDGGC 64

BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: A0A2C9U5L8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G041400 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.2e-16
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFCK 60
          MG +G LEWMN++S+++   LFWRV+AA+KKA+KN GK Q  FQYDP SYALNFDDG C 
Sbjct: 1  MGLIGRLEWMNSFSKKQCKSLFWRVKAAVKKAVKNGGKQQVNFQYDPSSYALNFDDGCCH 60

Query: 61 F 62
          F
Sbjct: 61 F 61

BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: V7BT41 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189400g PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16
Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFC- 60
          MG +  LEW+N YS++R   LFWR+RAA+KKA+KN GK + KFQYDP SYALNFDDGFC 
Sbjct: 1  MGLLERLEWVNAYSKKRCRSLFWRLRAALKKALKNGGKQRLKFQYDPSSYALNFDDGFCA 60

Query: 61 --KFEGKTDPMVL 71
            KF G    M L
Sbjct: 61 AKKFIGDARLMEL 73

BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: I1MED1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.3e-16
Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 0

Query: 1  MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFC- 60
          MG +  LEW+N Y ++R   LFWRVRAA+KKA+KN GK + KFQYDP SYALNFDDG C 
Sbjct: 1  MGLLERLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQRLKFQYDPSSYALNFDDGCCA 60

Query: 61 --KFEGKTDPMVLIVILHSSLLH 81
            KF G    M L  I +++L++
Sbjct: 61 AKKFIGDARLMELTDIHNNTLVY 83

BLAST of Sed0006501 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0

Query: 8  EWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDG 58
          E +N Y +    K+F R++AA+KK  K   K Q  FQYDP SYALNFDDG
Sbjct: 8  EAVNQYRK----KMFRRMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF3451534.11.2e-1766.18hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis][more]
QCD76710.12.3e-1663.01hypothetical protein DEO72_LG1g331 [Vigna unguiculata] >QCD76711.1 hypothetical ... [more]
EEF40896.13.9e-1671.67conserved hypothetical protein [Ricinus communis][more]
OAY24759.18.7e-1665.57hypothetical protein MANES_17G041400v8 [Manihot esculenta][more]
XP_007148211.11.1e-1561.64hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris] >ESW20205.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A4D6KJL71.1e-1663.01Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g331 PE=4 SV=1[more]
B9S5Y71.9e-1671.67Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1062440 PE=4 SV=1[more]
A0A2C9U5L84.2e-1665.57Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G041400 PE=4 SV=... [more]
V7BT415.5e-1661.64Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189400g PE=4 ... [more]
I1MED19.3e-1655.42Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11112.16.6e-0654.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538:SF10OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR34538EXPRESSED PROTEINcoord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006501.1Sed0006501.1mRNA