Sed0006501 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTTGTAGGCTCTCTGCCCACAGTAACTGCTCTTTCTCTGTCTTTATCTCTGTAAGTTGATGGAATTTGAGAATTCCAACATAACTCCAACCAGAAAAGGCTGATCATCCAAAAGATTACACTTTGCTCTTTGCCTTTGCCTTTGCCCTTCTCTCTTATTTCTTGCTCTCCTCTTGTATTCAAAAAGGAGAAATCTTCTTTTGTTTCTTTAATTCTGACACTCCTCCATAACCCCTTGATTGCAACCTCTTTATAATCCCCCTCAAATACCCTGAAAAACATCACAACAAACACTTCATTTCAAGGCCTTTTTGGGATTAGTAACAAATTTTTTTAGAGTTTAGAGAGTTTGAAGAAGTTGTATAAATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGTGTTGGTACTGAAACTCTTGCAAAGATTCAAACTTGTTCTAATTTGAATCACTCTGCCATGTGTGTTTTTGTACTTTTGGTGAAATCTGAGTGAATTTTTCTTGATTGACTCTTTGCTTGTTCTTTTTTCTTTTGGATTCTTGATTAGAAACCTTCTAGTTTCATTTTTGTACATCTATGCTTGTGCTATGATCTTCAAATATTAATTGGGTTTGTTTTGAGAGGAAAAACTTATACTAAGGTTATGATTTTCATCCTTGATTCATCACTCAACTTCTCATAACTATTTTGCTTCTGATTGTCATCCTTGGGGAAATCTCAGTGTATAGTATTCACTAATTTACTTTTGCAAAAGTTTTTTGTTACAATCTCATAACTATTTTACTTCTGATTGCCATCTCTGTGATTAAGCAAAAGTTTTTTTTTTAGATGAAATTGATAAGAACTTTTGCTTCTGAATTCTTGATTAGAAGAGAAACCATTTTGTTGCATTTTTGTACATCTATGCTTGTGGTATGATCTTCAATATTAATTGGTTTTATTTGTGAAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGACTTGGGGACGGACGTGGTTGAACACGGACATAGTAGAGTGAAACTATGATATCCCGGTTTCCGAAAAAAAATAAACTTTTGATTGTCATCCTTGAGGCAATCTCAGTTTATGGTATTAACTAATTAGTTTTGCAGATAACCCCAGTTCTAGGGTAAGCAAAAGTTCATTTTTTCTTTCTAACAGATGAAATTGAAGATAACTCTGTGACAATCTTTTGCCAAAAGTTGTAAGAGCACAAAAACAGATGAGAAAGAAGATGAAGGAATG GTCTTTGTAGGCTCTCTGCCCACAGTAACTGCTCTTTCTCTGTCTTTATCTCTGTAAGTTGATGGAATTTGAGAATTCCAACATAACTCCAACCAGAAAAGGCTGATCATCCAAAAGATTACACTTTGCTCTTTGCCTTTGCCTTTGCCCTTCTCTCTTATTTCTTGCTCTCCTCTTGTATTCAAAAAGGAGAAATCTTCTTTTGTTTCTTTAATTCTGACACTCCTCCATAACCCCTTGATTGCAACCTCTTTATAATCCCCCTCAAATACCCTGAAAAACATCACAACAAACACTTCATTTCAAGGCCTTTTTGGGATTAGTAACAAATTTTTTTAGAGTTTAGAGAGTTTGAAGAAGTTGTATAAATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGACTTGGGGACGGACGTGGTTGAACACGGACATAGTAGAGTGAAACTATGATATCCCGGTTTCCGAAAAAAAATAAACTTTTGATTGTCATCCTTGAGGCAATCTCAGTTTATGGTATTAACTAATTAGTTTTGCAGATAACCCCAGTTCTAGGGTAAGCAAAAGTTCATTTTTTCTTTCTAACAGATGAAATTGAAGATAACTCTGTGACAATCTTTTGCCAAAAGTTGTAAGAGCACAAAAACAGATGAGAAAGAAGATGAAGGAATG ATGGGATTTGTGGGAAGTTTAGAATGGATGAATAATTACAGTAGGAGGAGATTCAACAAACTGTTTTGGAGGGTGAGAGCTGCTATGAAGAAAGCCATCAAGAACAGGGGAAAGCCACAGTTCAAGTTCCAATATGATCCTTGCAGCTATGCTCTTAATTTTGATGATGGGTTTTGCAAATTTGAAGGAAAAACTGATCCTATGGTTTTGATTGTCATCCTTCATTCATCACTCCTTCATTTCGGTGTCTGA MGFVGSLEWMNNYSRRRFNKLFWRVRAAMKKAIKNRGKPQFKFQYDPCSYALNFDDGFCKFEGKTDPMVLIVILHSSLLHFGV Homology
BLAST of Sed0006501 vs. NCBI nr
Match: KAF3451534.1 (hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis]) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17 Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Sed0006501 vs. NCBI nr
Match: QCD76710.1 (hypothetical protein DEO72_LG1g331 [Vigna unguiculata] >QCD76711.1 hypothetical protein DEO72_LG1g332 [Vigna unguiculata]) HSP 1 Score: 95.5 bits (236), Expect = 2.3e-16 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Sed0006501 vs. NCBI nr
Match: EEF40896.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16 Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Sed0006501 vs. NCBI nr
Match: OAY24759.1 (hypothetical protein MANES_17G041400v8 [Manihot esculenta]) HSP 1 Score: 93.6 bits (231), Expect = 8.7e-16 Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Sed0006501 vs. NCBI nr
Match: XP_007148211.1 (hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris] >ESW20205.1 hypothetical protein PHAVU_006G189400g [Phaseolus vulgaris]) HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: A0A4D6KJL7 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g331 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16 Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: B9S5Y7 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1062440 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16 Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: A0A2C9U5L8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G041400 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-16 Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: V7BT41 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G189400g PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of Sed0006501 vs. ExPASy TrEMBL
Match: I1MED1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.3e-16 Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Sed0006501 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06 Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|