Sed0006500 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAAGTCTCATCAGCCACTTCCCTCCTCCTACTCTTCAACCTCCTTTTCTTCACTATGGTCAGCTCCACCTACGTCCCGTGCCCGCCCCCGCCACCAAAATACAACAAGCCCTCACCCTCGCACCAGCCGACGCCACTCCCCCAGTGCCCTAGGGACACCCTCAAGCTCGGTGTCTGCGCCGACTTGCTGGGCGGTCTAGTCCACGTGGTGATCGGGAGCCCACCGAAACCCCATGCTGCAGCCTGA ATGGCTTCCAAAGTCTCATCAGCCACTTCCCTCCTCCTACTCTTCAACCTCCTTTTCTTCACTATGGTCAGCTCCACCTACGTCCCGTGCCCGCCCCCGCCACCAAAATACAACAAGCCCTCACCCTCGCACCAGCCGACGCCACTCCCCCAGTGCCCTAGGGACACCCTCAAGCTCGGTGTCTGCGCCGACTTGCTGGGCGGTCTAGTCCACGTGGTGATCGGGAGCCCACCGAAACCCCATGCTGCAGCCTGA ATGGCTTCCAAAGTCTCATCAGCCACTTCCCTCCTCCTACTCTTCAACCTCCTTTTCTTCACTATGGTCAGCTCCACCTACGTCCCGTGCCCGCCCCCGCCACCAAAATACAACAAGCCCTCACCCTCGCACCAGCCGACGCCACTCCCCCAGTGCCCTAGGGACACCCTCAAGCTCGGTGTCTGCGCCGACTTGCTGGGCGGTCTAGTCCACGTGGTGATCGGGAGCCCACCGAAACCCCATGCTGCAGCCTGA MASKVSSATSLLLLFNLLFFTMVSSTYVPCPPPPPKYNKPSPSHQPTPLPQCPRDTLKLGVCADLLGGLVHVVIGSPPKPHAAA Homology
BLAST of Sed0006500 vs. NCBI nr
Match: XP_022944278.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata]) HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28 Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Sed0006500 vs. NCBI nr
Match: XP_022944335.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata]) HSP 1 Score: 134.0 bits (336), Expect = 5.9e-28 Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Sed0006500 vs. NCBI nr
Match: XP_038905266.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida]) HSP 1 Score: 132.1 bits (331), Expect = 2.2e-27 Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of Sed0006500 vs. NCBI nr
Match: XP_023540294.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.6 bits (327), Expect = 6.5e-27 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0006500 vs. NCBI nr
Match: XP_004147199.1 (14 kDa proline-rich protein DC2.15 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26 Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.6e-12 Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy Swiss-Prot
Match: Q00451 (36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.5e-07 Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy Swiss-Prot
Match: Q8RW93 (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.0e-06 Identity = 37/79 (46.84%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-05 Identity = 33/110 (30.00%), Postives = 50/110 (45.45%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy TrEMBL
Match: A0A6J1FXW6 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111448770 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28 Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy TrEMBL
Match: A0A6J1FYL5 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111448805 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28 Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy TrEMBL
Match: A0A0A0L2A4 (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_3G021150 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy TrEMBL
Match: A0A6J1KTK4 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111498536 PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 63/79 (79.75%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0006500 vs. ExPASy TrEMBL
Match: A0A6J1KVF0 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111498535 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Sed0006500 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 2.5e-16 Identity = 47/79 (59.49%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Sed0006500 vs. TAIR 10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 7.4e-13 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Sed0006500 vs. TAIR 10
Match: AT5G46900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of Sed0006500 vs. TAIR 10
Match: AT4G22460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 6.9e-11 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of Sed0006500 vs. TAIR 10
Match: AT1G12090.1 (extensin-like protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-10 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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