Sed0006491 (gene) Chayote v1

Overview


Name	Sed0006491
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 6-like
Location	LG09: 36931932 .. 36932540 (+)
RNA-Seq Expression	Sed0006491
Synteny	Sed0006491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAACAATAAGCAACAAAAAAAAAACAAAAACATATTTTGCAGTGTCCAATAAAATGTCCAATCAAAACCCCTCTTCCATTCTAAAGCTATTTGGATTCCCGCTGGTAGAACACGACGACATTCAGCCGGAAATGGGCGGCGGCGGAAACGACGGCGACGCCAACTCCGACGACGACAAAAAATTCCGGTGCCAATTCTGCCGCCGTGTGTTCGCCAACTCGCAAGCTCTCGGAGGGCATCAAAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCATTTATTTCCACGCCGCCGCCGCACTCCGGCCGCCGCAGATTTACTCAACCGGTTTCCCGACCAACATCGGCGGCGGCGGCGGCTCTCGCCTTCTGCCTCGGAGCGGTAAAGGCTACTTTGCGGCGGCGGCGTACGGAGGCGTACCGGCGGGGTCAGGGCGGTGGATGTTTGGAAATTCCGGCGAAGTGAAAATGGAAATTTCAAAAGAGCAAGTGGGTGTTGTTGATCTTCATCTTAAACTCTCTCCATCTGGTTCATGAATTTTAATTTAATTAATGTCTCTAACTTTATGAACATCAAGACCAATTAATGATGAATTAGA

mRNA sequence

GAAAAAAACAATAAGCAACAAAAAAAAAACAAAAACATATTTTGCAGTGTCCAATAAAATGTCCAATCAAAACCCCTCTTCCATTCTAAAGCTATTTGGATTCCCGCTGGTAGAACACGACGACATTCAGCCGGAAATGGGCGGCGGCGGAAACGACGGCGACGCCAACTCCGACGACGACAAAAAATTCCGGTGCCAATTCTGCCGCCGTGTGTTCGCCAACTCGCAAGCTCTCGGAGGGCATCAAAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCATTTATTTCCACGCCGCCGCCGCACTCCGGCCGCCGCAGATTTACTCAACCGGTTTCCCGACCAACATCGGCGGCGGCGGCGGCTCTCGCCTTCTGCCTCGGAGCGGTAAAGGCTACTTTGCGGCGGCGGCGTACGGAGGCGTACCGGCGGGGTCAGGGCGGTGGATGTTTGGAAATTCCGGCGAAGTGAAAATGGAAATTTCAAAAGAGCAAGTGGGTGTTGTTGATCTTCATCTTAAACTCTCTCCATCTGGTTCATGAATTTTAATTTAATTAATGTCTCTAACTTTATGAACATCAAGACCAATTAATGATGAATTAGA

Coding sequence (CDS)

ATGTCCAATCAAAACCCCTCTTCCATTCTAAAGCTATTTGGATTCCCGCTGGTAGAACACGACGACATTCAGCCGGAAATGGGCGGCGGCGGAAACGACGGCGACGCCAACTCCGACGACGACAAAAAATTCCGGTGCCAATTCTGCCGCCGTGTGTTCGCCAACTCGCAAGCTCTCGGAGGGCATCAAAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCATTTATTTCCACGCCGCCGCCGCACTCCGGCCGCCGCAGATTTACTCAACCGGTTTCCCGACCAACATCGGCGGCGGCGGCGGCTCTCGCCTTCTGCCTCGGAGCGGTAAAGGCTACTTTGCGGCGGCGGCGTACGGAGGCGTACCGGCGGGGTCAGGGCGGTGGATGTTTGGAAATTCCGGCGAAGTGAAAATGGAAATTTCAAAAGAGCAAGTGGGTGTTGTTGATCTTCATCTTAAACTCTCTCCATCTGGTTCATGA

Protein sequence

MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNIGGGGGSRLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSGS

Homology

[Close]

BLAST of Sed0006491 vs. NCBI nr
Match: XP_008451655.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 2.8e-58
Identity = 129/174 (74.14%), Postives = 138/174 (79.31%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI---GGGGGSRLLPRSGKG 120
           ALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+N    GGGGGSR+LPR+G G
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH-AAALRPPSLYSSVFPSNFGGDGGGGGSRILPRNGNG 120

Query: 121 YFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS 163
           YFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Sbjct: 121 YFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNS 173

[Close]

BLAST of Sed0006491 vs. NCBI nr
Match: KAA0046676.1 (zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger protein 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 6.1e-58
Identity = 129/177 (72.88%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI------GGGGGSRLLPRS 120
           ALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+N       GGGGGSR+LPR+
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH-AAALRPPSLYSSVFPSNFGGDGGGGGGGGSRILPRN 120

Query: 121 GKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS 163
           G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Sbjct: 121 GNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNS 176

[Close]

BLAST of Sed0006491 vs. NCBI nr
Match: XP_023004876.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 124/169 (73.37%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALG 60
           MSNQNPS+ILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSTILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGFPTNIGGGGGS---RLLPRSG 120
           GHQNAHKRERQRAKRA+YFHA     AAALRPP  YS+ FP +IGGGGG    R LPRS 
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPPPFYSSVFPAHIGGGGGHRGYRFLPRSD 120

Query: 121 KGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG 162
            GYF  AAYGGV AGSGRWMFGNSGE   + S + V VVDLHLKLSPSG
Sbjct: 121 HGYF-TAAYGGVSAGSGRWMFGNSGEGGEKGSTDDVDVVDLHLKLSPSG 168

[Close]

BLAST of Sed0006491 vs. NCBI nr
Match: KAG7025578.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57
Identity = 125/174 (71.84%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALG 60
           MSNQNPSSILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSSILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRAIYFH------------AAAALRPPQIYSTGFPTNIGGG-GGSRL 120
           GHQNAHKRERQRAKRA+YFH            AA ALRPP  YS+ FP NIGGG  G R 
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAAAAAAAVALRPPPFYSSVFPANIGGGHRGYRF 120

Query: 121 LPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG 162
           LPRS  GYF  AAYGGV AGSGRWMFGNSGE   + S + VGVVDLHLKLSPSG
Sbjct: 121 LPRSENGYF-TAAYGGVSAGSGRWMFGNSGEGGEKGSTDDVGVVDLHLKLSPSG 173

[Close]

BLAST of Sed0006491 vs. NCBI nr
Match: XP_023514545.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 8.9e-57
Identity = 123/169 (72.78%), Postives = 130/169 (76.92%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALG 60
           MSNQNPSSILKLFG PLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSSILKLFGVPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGFPTNIGGGGGS---RLLPRSG 120
           GHQNAHKRERQRAKRA+YFHA     AAALRP   YS+ FP NIGGGGG    R +PRS 
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPLPFYSSVFPANIGGGGGHRGYRFVPRSD 120

Query: 121 KGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG 162
            GYF  AAYGGV  GSGRWMFGNSGE   + S + VGVVDLHLKLSPSG
Sbjct: 121 NGYF-TAAYGGVSVGSGRWMFGNSGEGGEKGSTDDVGVVDLHLKLSPSG 168

[Close]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAH 66
          +S LKLFG  L+E   +Q         G  +  + +K+ CQ+C R FANSQALGGHQNAH
Sbjct: 5  TSSLKLFGINLLETTSVQ-NQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAH 64

Query: 67 KRERQRAKRA 77
          K+ERQ  KRA
Sbjct: 65 KKERQLLKRA 73

[Close]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 2   SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDAN 61
           S++  +S LKLFGF +   +D            + PE G          GGG  + G   
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 62  SDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA 77
              ++K+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRA 105

[Close]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 10 LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHK 69
          ++LFGF     H++ + +     N+     D+ +K+F+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 70 RERQRAKRAIYFHAAAA 85
          RERQ+ KR      AAA
Sbjct: 79 RERQQTKRFNLHSNAAA 95

[Close]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 33  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQ 92
           D D +++++++F C +C R F  SQALGGHQNAHKRERQ AKR     Y H      P  
Sbjct: 84  DKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHH 143

Query: 93  IYSTGFPTN 99
           IY  GF  N
Sbjct: 144 IY--GFLNN 150

[Close]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 40  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG 95
           D + F C +C+R F +SQALGGHQNAHKRER  AKR  Y+    +  P   ++ G
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

[Close]

BLAST of Sed0006491 vs. ExPASy TrEMBL
Match: A0A1S3BSU1 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 129/174 (74.14%), Postives = 138/174 (79.31%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI---GGGGGSRLLPRSGKG 120
           ALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+N    GGGGGSR+LPR+G G
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH-AAALRPPSLYSSVFPSNFGGDGGGGGSRILPRNGNG 120

Query: 121 YFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS 163
           YFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Sbjct: 121 YFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNS 173

[Close]

BLAST of Sed0006491 vs. ExPASy TrEMBL
Match: A0A5D3D1T3 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001500 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.0e-58
Identity = 129/177 (72.88%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMG---GGGNDGDANSDDDKKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD  PE     GGG D   NSDDD+KFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNI------GGGGGSRLLPRS 120
           ALGGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+N       GGGGGSR+LPR+
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH-AAALRPPSLYSSVFPSNFGGDGGGGGGGGSRILPRN 120

Query: 121 GKGYFA-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS 163
           G GYFA  AAYGGV A SGRWMFGNS E KME S  ++G      VDLHLKLSPS S
Sbjct: 121 GNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNS 176

[Close]

BLAST of Sed0006491 vs. ExPASy TrEMBL
Match: A0A6J1KTC7 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.1e-58
Identity = 124/169 (73.37%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALG 60
           MSNQNPS+ILKLFGFPLVEHDD+ P    GG   D NSD D+KFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSTILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRAIYFHA-----AAALRPPQIYSTGFPTNIGGGGGS---RLLPRSG 120
           GHQNAHKRERQRAKRA+YFHA     AAALRPP  YS+ FP +IGGGGG    R LPRS 
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPPPFYSSVFPAHIGGGGGHRGYRFLPRSD 120

Query: 121 KGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPSG 162
            GYF  AAYGGV AGSGRWMFGNSGE   + S + V VVDLHLKLSPSG
Sbjct: 121 HGYF-TAAYGGVSAGSGRWMFGNSGEGGEKGSTDDVDVVDLHLKLSPSG 168

[Close]

BLAST of Sed0006491 vs. ExPASy TrEMBL
Match: A0A0A0K5R1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 121/172 (70.35%), Postives = 131/172 (76.16%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDAN-SDDDKKFRCQFCRRVFANSQAL 60
           MSN NPSSILKLFGFPLVEHDD  PE   G    D   S+DD+KFRCQFCRRVFANSQAL
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTGFPTNIGG-GGGSRLLPR--SGKGYF 120
           GGHQNAHKRERQRAKRA+YFH AAALRPP +YS+ FP+NIGG GG SR+L R  +  GYF
Sbjct: 61  GGHQNAHKRERQRAKRALYFH-AAALRPPSLYSSVFPSNIGGDGGASRILHRNNNSNGYF 120

Query: 121 A-AAAYGGVPAGSGRWMFGNSGEVKMEISKEQVG-----VVDLHLKLSPSGS 163
              AAYGGV A SGRWMFGNS E  ME S  ++G      VDLHLKLSPS S
Sbjct: 121 TETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNS 171

[Close]

BLAST of Sed0006491 vs. ExPASy TrEMBL
Match: A0A6J1DIE9 (zinc finger protein GIS3-like OS=Momordica charantia OX=3673 GN=LOC111021368 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.4e-52
Identity = 122/175 (69.71%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALG 60
           MSNQNPSSILKLFGFPLV+HDD++PE   G      NSDDD+KFRCQFCRRVFANSQALG
Sbjct: 1   MSNQNPSSILKLFGFPLVDHDDVKPERSDG-----TNSDDDRKFRCQFCRRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRAIYFHAAAALR-------PPQ-IYSTGFPTNI---GGGGG----S 120
           GHQNAHKRERQRAKRA+YFH A ALR       PPQ +YS  F  NI   GGGGG    S
Sbjct: 61  GHQNAHKRERQRAKRALYFHTAHALRSPPSPPPPPQPLYSRVFAPNIDVVGGGGGVGASS 120

Query: 121 RLLPRSGKGYFAAAAYGGVPAGSGRWMFGNSGEVKMEISKEQVGVVDLHLKLSPS 161
           R LPR   GYF AAAYG V A SGRW+FGNSGE   + S + VGVVDLHLKLSPS
Sbjct: 121 RFLPRISNGYF-AAAYGSVSASSGRWIFGNSGE---KGSSDHVGVVDLHLKLSPS 166

[Close]

BLAST of Sed0006491 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDIQPEMGGGGNDGDANSDDDKKFRCQFCRRVFANSQALGGHQNAH 66
          +S LKLFG  L+E   +Q         G  +  + +K+ CQ+C R FANSQALGGHQNAH
Sbjct: 5  TSSLKLFGINLLETTSVQ-NQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAH 64

Query: 67 KRERQRAKRA 77
          K+ERQ  KRA
Sbjct: 65 KKERQLLKRA 73

[Close]

BLAST of Sed0006491 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 2   SNQNPSSILKLFGFPLVEHDD------------IQPEMG----------GGG--NDGDAN 61
           S++  +S LKLFGF +   +D            + PE G          GGG  + G   
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 62  SDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA 77
              ++K+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA
Sbjct: 67  GGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRA 105

[Close]

BLAST of Sed0006491 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 10 LKLFGFPL-VEHDDIQPEMGGGGNDGDANSDD-DKKFRCQFCRRVFANSQALGGHQNAHK 69
          ++LFGF     H++ + +     N+     D+ +K+F+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 70 RERQRAKRAIYFHAAAA 85
          RERQ+ KR      AAA
Sbjct: 79 RERQQTKRFNLHSNAAA 95

[Close]

BLAST of Sed0006491 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 33  DGDANSDDDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---AIYFHAAAALRPPQ 92
           D D +++++++F C +C R F  SQALGGHQNAHKRERQ AKR     Y H      P  
Sbjct: 84  DKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHH 143

Query: 93  IYSTGFPTN 99
           IY  GF  N
Sbjct: 144 IY--GFLNN 150

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BLAST of Sed0006491 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 40  DDKKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAIYFHAAAALRPPQIYSTG 95
           D + F C +C+R F +SQALGGHQNAHKRER  AKR  Y+    +  P   ++ G
Sbjct: 64  DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

The following BLAST results are available for this feature:

BLAST of Sed0006491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451655.1	2.8e-58	74.14	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
KAA0046676.1	6.1e-58	72.88	zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger pr...	[more]
XP_023004876.1	1.0e-57	73.37	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
KAG7025578.1	2.3e-57	71.84	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023514545.1	8.9e-57	72.78	zinc finger protein 6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0006491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	2.0e-11	51.43	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	1.7e-10	41.41	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q9FG05	1.2e-08	44.16	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	1.6e-08	49.28	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]
Q42485	7.9e-08	49.09	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]

BLAST of Sed0006491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSU1	1.3e-58	74.14	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1	[more]
A0A5D3D1T3	3.0e-58	72.88	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1KTC7	5.1e-58	73.37	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 S...	[more]
A0A0A0K5R1	1.9e-52	70.35	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 P...	[more]
A0A6J1DIE9	5.4e-52	69.71	zinc finger protein GIS3-like OS=Momordica charantia OX=3673 GN=LOC111021368 PE=...	[more]

BLAST of Sed0006491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	1.4e-12	51.43	zinc finger protein 6	[more]
AT1G68360.1	1.2e-11	41.41	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06650.1	8.7e-10	44.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	1.1e-09	49.28	zinc finger protein 8	[more]
AT1G80730.1	5.6e-09	49.09	zinc-finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 33..84 e-value: 2.2E-6 score: 29.3
None	No IPR available	PANTHER	PTHR46353:SF11	ZINC FINGER PROTEIN 6-LIKE	coord: 1..83
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 1..83
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 46..66
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 44..71 score: 11.447647
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 40..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006491.1	Sed0006491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding