Sed0006486 (gene) Chayote v1

Overview


Name	Sed0006486
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Homeobox protein knotted-1, putative
Location	LG10: 3858229 .. 3863535 (+)
RNA-Seq Expression	Sed0006486
Synteny	Sed0006486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACACAGCCCACATTAATAAAAAGCACAAATTAATGAGACCAGGCTTTTGCAGTTTCTCAAAAGCCAGAACTTTTCGAAGCTAAAATCCCGGGAGTGCCCCAAAGAAACTAAAAAAAAAGAAGTGGATTAAATAGGAGAGAGAAAGAAATTAATACAACACCTCTCAAAAAAACACTCAATCCAAGTTTGGTTTTTTGTGAATGGATGGTTGTGGTGGAAGTTCTTGTTCTTCAGGTATGATGAATCATTTTGGAGATCAAATAAATAATGGGTTATCTTCCATGATGATGATGATGCCTTTATTGTCCTCCTCTCACAACAACTCCAATGGAGATCAAGATCATTCATGCAATCATCCATTGTTTCCTCTTCCCCCCAATTACACCAATAATTCCCATTCTAACCCTATTTGTTACTTCATGAATGAGGCTAATAATGCCAATTCCTCCTCCTCTTCTTCTTCTTCAAATGAACTCAAAGCTAAAATCATGTCCCATCCTCACTACCATCGCCTCCTCAACGCCTATGTCAATTGTCGTAAGGTAAAATTAATCAACCAAAAAAAAAAAACTTTTTTTTATAAAAAATTATTATCATTATTTTTTAAAGTTGGTGTAATTTATGCTCTATTAGTTATATACGCATACTTATGTCGGTTGAGTTATTGTCGTAGGTCGGGGCGCCACCGGAAGCGGTGGCGAGGCTCGAGGAGGTGTGTGCAACGGCAGCGGCGATGAGCGGAACGTCAACGGGGTGTGTTGGGGAAGATCCGGCGCTTGATCAGTTCATGGAGGCTTATTGTGAGATGCTCACTAAATATGAACAAGAACTTTCTAAACCCTTTAGAGATGCCATGCTTTTTCTTCAAAGGATTGAGTCCCAGTTCAAAGCCCTCTCTTTGTCCTCTGATGCTGGTCTATTTTTCTAACTACCTCTTTTTTTTTTGTTCATTTTAATGCATGTTTGTTTGATTGATGTGTTGCTATGTAGTTTAGTTTAGTTTAGTTTTTTTTTTTTAATTAGTTTGTTAATTATTATTATTGTTAGGATGTGAAGATCCCTAAAGTGGATGGATGGATGGATGGCCTCTTCCTCTCAACTTTAGTTTTTTTTCCCTTTCCATTTCTTGCTAGGGCATCAAGGAGTGAACCATTTCAATATATTTTTTTTTTAATTTAATAAAATAAAATTAAAATTTTTATTTTTATTGTTCTTGGTCAGTTTCTTCACTTTTATGCGAGTTTTAGTCTGTGGGTACTAGAACTGAGTTTTGTGTCCAAAACAATGATTTGTTCTTAGGGTTTATTGTAAGTTTCTAGGTTTGATGTATTGTACTGAGAGATTGGGACATCCTCACCATCATTAATTTACATAGTAATTAGTAGTCAAATGCAAAGACAAAATAGATTTTTGGTTCATTATATAAGAATTAATTTCTTATGGTTTTATTGATATTTCAGTGTTATAGTCGAGATGCCAGTCACTCACGACTCACAGATATTAAAAAAAATAAAGGAAAATAAGTTGGTAGTCAAATACACTATTGTTCTTAATCATTTAGTTGTTTAGAGATTATTCATTCAATCCATAGTAGATATATCCTCATATTTTTTCAAAATAAGAAAGAAAGATATCCACATGTAGTTTAATTAAATTTCTGTGACTCAACATGTTAACCAAGTATAATGTTAAGCCGGATTTGCTTTAGTTTGCTTAGATACTCACGGATATTATAAAAAAGAAGTATAGATGCTTAGCTAACAGTTTTTTTTGTTATTATTATTTTATTTGAGTTCAGCCTAGTAAATAGTTAGTGGTGTGGCCTTTCATGAATTTTCAATTAATGTTCTCATTTGTAACTTGAAAACTATTCAATTTTTTTCCGAACTACAAATTTGTTTTGATAAAATTGTATAATGATTTTTAAGCATAATTTTTTTTTTGAGAATGATTTTCAAGCATAATTAATTATTAGTTAAACCATCTGTGTTGTTCACAAGGCTTCATCTAGATGTTTGTGTCAACAACTGTCAATTAGAAATGAAGGAATCTATCTGTGTACAGTTGATTGACAACTAACAGGCCACTGGAGTGTTTCTATTTCACCCCTGTTGAATTCAAACCATCAATTCATAGTGTTTGTATTGCATTTTTGAAATGAATTAGAGACCATATGTTCATATTTTGTTGTTATTTGCTTTTGTTTTGATCTCTCATTCATGGCCATTGGATTATGTATGATCTACACGATCTTACATCTTCGATACTTCACCGTGGAGTTCATCTTTCTTCTTCTTATTGTGACACTTTCGAAATTGTTTCGATATATTCGAAGTGAGGACCTTTGATGTTATATCATAGTTTTTTTTATTGTAACATTTAACTTTCTTTTGTTTTTGTGCCAGTTTAATTGTGCACATTATTTTGGTGTCTGGCCTAGAGATGGGCGTGGTTACTCTTGTTTCAAAAAAAAAAAATTGTGCACATTATTTTGTAAATCTTTTTGGTTTTCTGATTTTGAATAATCCTTTATTACTAGTGTCAGTATTTTTTAATTGATATCTGAGGATAACAGATTTTAAATTTGTATTTTTGACATGCAATATGACTATGATTTTAGGTTGTACGTTTCTGCTACAGTCACATTGGCAAGTTTTCTTGTAATTTATAATAGTGAATTTTACCCTCAGCATCACATTTTATCTCTGGTATAATTCATCTGTAACACATAATTTTCTATCAGTGATAGAACTCAACCATTGATAGAACATAATTTTCTATCAGTGGTAGAACTCAACGAGTGATAGAATGAATGTATGACTAATTGAATTCTATTACTGATAGAATTCGACCAAGGATTGAACTTAATTTGGATTTTTTTTTTTGTTACATATGAATTAGTTTTGAATTTGTGTGTCCTTTTTTTTATACATGCAAATCCCGATTATAATATATATTGGTATCTGTTGATTAAAAAATGTGATTTTAGGTTGTATTTTATAGATAGTTTGTGAGAACTAGTATGAGCTTTCAGTTGCATGGATGATCATTTATGTAATTGTTGACACAGCTACATCTTATATTATTTTATATCTTGCTTTAGAAATGCCTCATTATGTTGTTTTGATAATTCAGGATTCTTTTTGTATTTGTTTAACAATATCCCAAAACTGAATTTTCATGTGTTTTGACTTGGAATTCAGAAAGTACACTTTAGTTTTTGGTTTTATTTGCTACCTATTACTTTTTGTTTATATCTGTTCCAATATATATGCATTCACTATAATAAATCATATATTGAAACATCTAGAATAGTTTCCATGTTGTCGTTTTCTTCTAAAAATATTGAAACATCATCCTTATGGTTCTAACTCTTGCCTGGGCCTTGTCTTATAAAATTAAATGTCCTGTCATTTTCTTGAAAAAGTTTGTGTTCTTATTGGATTAGGTCTAAACATTGCACTTAAATAATTATGGTAGCTGGTTACTTGATTTGTAAGCTTAATTAATCTTGTGCAGGAATAGTAGGCCTTAATTAGCTCCATTGTGACTTAACCTTGACGCAATCCGAATTATGTAAATCACCAATCAACCCTAAAGCTTAAATTGATGGATTGACTTTCTGCTCTGCTATTATGTTGAATTATATTAAATCGGCAATGAACTCAAAAGTTTTAAGCTTATGGACTGTGGTAAATTTAATTACATCAACCAACATCTACACATATGCTTGTTCATTTTGATCACATATGAAGACATGGTTTTATTATGATTTTACATATGTTTATTGATATTATTAAATTTATCCCAACTTGCTTGCTTCCGTAAATGGGTTGATTAGTGATTTAACACAATTTAATGGTATTCGAGTTGCTTTTTGATTGATTGGTGATTTTACATGATTCAACGATATTAACTTGGGAATTAGTACACTTTCTTTGATCACGTTTCTATGTTTACTTGTTCGATCTTTGGCTGACACATCTTATACGTGCCACCCAGCTAGTGGCGAAGCATTTGATAGGAATGGATCATCGGAAGATGAAGTCGATATCAATGGCCACTCCATCGACCCCCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTGCTCCGCAAGTACAGCGGATACTTGGGCAGTCTCAAGCAAGAATTCATGAAGAAGAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCTGTAAGTGTACTAATTCCTCTCAAAATCTCGTTTGATAAACATTTGATTTTGAATATTTTAGTTTATTATTTCTCAAATTTCATGTGTTTCATCTTTCCTTGCGAAGTATGTGAATCCAAATTTCATATACAAAAACAAACTTTTAAAAACTACTTTTTTTTTTAAAAAATTTTGTTTGGTTTTTTAAAATATGGGTAAAGTGTAAATATTCAAACAATAAAAGTTATATAATGAACTAGTTGTAGTACACTTAAATTTCATAAACCAAAAATTAAAAACATAATAGTTATCGGATGAGGCCTAAGTTAATATCAACCCAAGGGCAAGACAAAAGTTGAATATATTTTTGTTATTTATTTTATAATTTTAAATAAATTAAAATACATTCCAAAGACTTAAATATTGGTAAGAATTTTGAATCACCTTTCAAACTGGGTTGGGTTGGGTTGATGGAGTCATTCGAGAAGTTTGGACACCCCTAGTATGTACCCTCATTTAATTCGACACGATGTTGCGTCGATCTCGTTTTGTTGATGCAATGCTGTTTTTTTAACAGGAATCCCAGAAGCTAGCTTTAGCTCAATCAACAGGGTTAGATCAAAAGCAAATCAACAATTGGTTTATCAACCAAAGAAAGAGACATTGGAATCCATCAGAAGACATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGACCATGTCTTGGGAAATCCTTTTCCCTTGGATATCTCTCACACTCTACTCTAATTAATTAATTTCCAAAAATGTTATGATTTTAATATATGATAGCATTTTTCTCTTTTTTGTGTATGAATGTTTGAGGAATTATCCAACTGGTTTGACAGAACTTGTATGCCTTTTTTGTTTCTTCATATCATATTTGCCAACATGGAAGTTGGAAAATTGAACATGTTTTGTGAGTTCTAGGTTTGTTGTGCATGAAATTGATTTTGTACATGTACTGATGTTCATGGGAGTTCTTTGTTAGGATTTGGAGTTGTGGATCTTTGGATTTTTGGTGTATTTGTTACGATGATTTCAGAG

mRNA sequence

CAAACACAGCCCACATTAATAAAAAGCACAAATTAATGAGACCAGGCTTTTGCAGTTTCTCAAAAGCCAGAACTTTTCGAAGCTAAAATCCCGGGAGTGCCCCAAAGAAACTAAAAAAAAAGAAGTGGATTAAATAGGAGAGAGAAAGAAATTAATACAACACCTCTCAAAAAAACACTCAATCCAAGTTTGGTTTTTTGTGAATGGATGGTTGTGGTGGAAGTTCTTGTTCTTCAGGTATGATGAATCATTTTGGAGATCAAATAAATAATGGGTTATCTTCCATGATGATGATGATGCCTTTATTGTCCTCCTCTCACAACAACTCCAATGGAGATCAAGATCATTCATGCAATCATCCATTGTTTCCTCTTCCCCCCAATTACACCAATAATTCCCATTCTAACCCTATTTGTTACTTCATGAATGAGGCTAATAATGCCAATTCCTCCTCCTCTTCTTCTTCTTCAAATGAACTCAAAGCTAAAATCATGTCCCATCCTCACTACCATCGCCTCCTCAACGCCTATGTCAATTGTCGTAAGGTCGGGGCGCCACCGGAAGCGGTGGCGAGGCTCGAGGAGGTGTGTGCAACGGCAGCGGCGATGAGCGGAACGTCAACGGGGTGTGTTGGGGAAGATCCGGCGCTTGATCAGTTCATGGAGGCTTATTGTGAGATGCTCACTAAATATGAACAAGAACTTTCTAAACCCTTTAGAGATGCCATGCTTTTTCTTCAAAGGATTGAGTCCCAGTTCAAAGCCCTCTCTTTGTCCTCTGATGCTGCTAGTGGCGAAGCATTTGATAGGAATGGATCATCGGAAGATGAAGTCGATATCAATGGCCACTCCATCGACCCCCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTGCTCCGCAAGTACAGCGGATACTTGGGCAGTCTCAAGCAAGAATTCATGAAGAAGAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCTGAATCCCAGAAGCTAGCTTTAGCTCAATCAACAGGGTTAGATCAAAAGCAAATCAACAATTGGTTTATCAACCAAAGAAAGAGACATTGGAATCCATCAGAAGACATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGACCATGTCTTGGGAAATCCTTTTCCCTTGGATATCTCTCACACTCTACTCTAATTAATTAATTTCCAAAAATGTTATGATTTTAATATATGATAGCATTTTTCTCTTTTTTGTGTATGAATGTTTGAGGAATTATCCAACTGGTTTGACAGAACTTGTATGCCTTTTTTGTTTCTTCATATCATATTTGCCAACATGGAAGTTGGAAAATTGAACATGTTTTGTGAGTTCTAGGTTTGTTGTGCATGAAATTGATTTTGTACATGTACTGATGTTCATGGGAGTTCTTTGTTAGGATTTGGAGTTGTGGATCTTTGGATTTTTGGTGTATTTGTTACGATGATTTCAGAG

Coding sequence (CDS)

ATGGATGGTTGTGGTGGAAGTTCTTGTTCTTCAGGTATGATGAATCATTTTGGAGATCAAATAAATAATGGGTTATCTTCCATGATGATGATGATGCCTTTATTGTCCTCCTCTCACAACAACTCCAATGGAGATCAAGATCATTCATGCAATCATCCATTGTTTCCTCTTCCCCCCAATTACACCAATAATTCCCATTCTAACCCTATTTGTTACTTCATGAATGAGGCTAATAATGCCAATTCCTCCTCCTCTTCTTCTTCTTCAAATGAACTCAAAGCTAAAATCATGTCCCATCCTCACTACCATCGCCTCCTCAACGCCTATGTCAATTGTCGTAAGGTCGGGGCGCCACCGGAAGCGGTGGCGAGGCTCGAGGAGGTGTGTGCAACGGCAGCGGCGATGAGCGGAACGTCAACGGGGTGTGTTGGGGAAGATCCGGCGCTTGATCAGTTCATGGAGGCTTATTGTGAGATGCTCACTAAATATGAACAAGAACTTTCTAAACCCTTTAGAGATGCCATGCTTTTTCTTCAAAGGATTGAGTCCCAGTTCAAAGCCCTCTCTTTGTCCTCTGATGCTGCTAGTGGCGAAGCATTTGATAGGAATGGATCATCGGAAGATGAAGTCGATATCAATGGCCACTCCATCGACCCCCAAGCCGAAGACCGTGAACTGAAAGGTCAGCTGCTCCGCAAGTACAGCGGATACTTGGGCAGTCTCAAGCAAGAATTCATGAAGAAGAGGAAGAAAGGGAAGCTGCCTAAGGAGGCCAGACAACAGCTCCTTGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCTGAATCCCAGAAGCTAGCTTTAGCTCAATCAACAGGGTTAGATCAAAAGCAAATCAACAATTGGTTTATCAACCAAAGAAAGAGACATTGGAATCCATCAGAAGACATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGACCATGTCTTGGGAAATCCTTTTCCCTTGGATATCTCTCACACTCTACTCTAA

Protein sequence

MDGCGGSSCSSGMMNHFGDQINNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPLPPNYTNNSHSNPICYFMNEANNANSSSSSSSSNELKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTSTGCVGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASGEAFDRNGSSEDEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL

Homology

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BLAST of Sed0006486 vs. NCBI nr
Match: XP_038883370.1 (homeobox protein knotted-1-like LET6 [Benincasa hispida])

HSP 1 Score: 516.5 bits (1329), Expect = 1.7e-142
Identity = 280/357 (78.43%), Postives = 300/357 (84.03%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQINNG-------LSSMMMMMPLLSSSHNNSNGDQDHSCNHP 60
           MDG  GSS S GMMN FGDQ NN         S+MMMMMPL+SSS    NG    SC  P
Sbjct: 1   MDGPSGSS-SGGMMN-FGDQNNNNNNNNNGLCSTMMMMMPLISSSQQGGNG----SCT-P 60

Query: 61  LFPLPPNYTNNSH--SNPICYFMNEANNANSSSSSSSSN---ELKAKIMSHPHYHRLLNA 120
              LPPNY NN++  +N IC +  ++NN N++ SS+  N   E+KAKIM+HPHYHRLL A
Sbjct: 61  FLSLPPNYNNNNNTSNNSICNYFMDSNNNNNNESSNGGNSCCEVKAKIMAHPHYHRLLAA 120

Query: 121 YVNCRKVGAPPEAVARLEEVCATAAAMSGTSTGCVGEDPALDQFMEAYCEMLTKYEQELS 180
           YVNCRKVGAPPE VA LEE CA+AA MSG S+GC+GEDPALDQFMEAYCEML KYEQELS
Sbjct: 121 YVNCRKVGAPPEVVAGLEEACASAARMSGNSSGCIGEDPALDQFMEAYCEMLIKYEQELS 180

Query: 181 KPFRDAMLFLQRIESQFKALSLSSD--AASGEAFDRNGSSEDEVDINGHSIDPQAEDREL 240
           KPFRDAMLFLQRI+SQFKALS+SS    A GEAFDRNGSSE+EVDING+SIDPQAEDREL
Sbjct: 181 KPFRDAMLFLQRIDSQFKALSISSSYPPACGEAFDRNGSSEEEVDINGNSIDPQAEDREL 240

Query: 241 KGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQS 300
           KGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQS
Sbjct: 241 KGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQS 300

Query: 301 TGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           TGLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS TLL
Sbjct: 301 TGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL 350

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BLAST of Sed0006486 vs. NCBI nr
Match: XP_023518637.1 (homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.2 bits (1328), Expect = 2.2e-142
Identity = 289/366 (78.96%), Postives = 304/366 (83.06%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQ--INNGL-SSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPL 60
           MDG GGS  SSGMMN FGDQ   NNGL SSMMMMMPL+SS H++  GD   +CN P  PL
Sbjct: 1   MDGPGGS--SSGMMN-FGDQNNSNNGLCSSMMMMMPLMSSHHHHHQGD---ACN-PFPPL 60

Query: 61  P-PNYTNN--------SHSNPICYFMNE---------ANNANSSSSSSSSNELKAKIMSH 120
           P PNYT N        S SNPICYFM+E          N+    +++SSS ELKAKIM H
Sbjct: 61  PSPNYTTNNINNTNTSSSSNPICYFMDEHTTTTTTTNNNDHGCCNANSSSCELKAKIMGH 120

Query: 121 PHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTS-TGCVGEDPALDQFMEAYCE 180
           PHYHRLL AYVNCRKVGAPP+ VARLE  CA+A  MSGTS TGC+GEDPALDQFMEAYCE
Sbjct: 121 PHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTMSGTSCTGCIGEDPALDQFMEAYCE 180

Query: 181 MLTKYEQELSKPFRDAMLFLQRIESQFKALSL-SSDAASGEAFDRNGSSEDEVDINGHSI 240
           MLTKYEQELSKPFRDAMLFL RIE QFKALS+ SSDA  GEAF+RNGSSE+EVDINGHSI
Sbjct: 181 MLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAVCGEAFERNGSSEEEVDINGHSI 240

Query: 241 DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 300
           DPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE
Sbjct: 241 DPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 300

Query: 301 SQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLD 344
           SQKLALAQSTGLDQKQINNWFINQRKRHW PSEDMQFVVMD  HPQYYMD VLGNPFPLD
Sbjct: 301 SQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNPFPLD 359

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BLAST of Sed0006486 vs. NCBI nr
Match: XP_022132524.1 (homeobox protein SBH1 [Momordica charantia])

HSP 1 Score: 515.8 bits (1327), Expect = 2.9e-142
Identity = 285/356 (80.06%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 5   GGSSCSSGMMNHFGDQINNG--LSSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPLPP--N 64
           GG   SSGMMN FGDQ NN    SSMMMMMPL+SS      GD   S   PL P PP  N
Sbjct: 6   GGGGSSSGMMN-FGDQNNNNGLCSSMMMMMPLMSS----HGGDGACSSFLPLPPPPPPHN 65

Query: 65  Y---TNNSHSNPICYFM------NEANN--ANSSSSSSSSNELKAKIMSHPHYHRLLNAY 124
           Y    NN+ +NPI YFM      N +NN  AN+++SSSSS+++KAKIM+HPHYHRLL AY
Sbjct: 66  YEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPHYHRLLAAY 125

Query: 125 VNCRKVGAPPEAVARLEEVCATAAAMSGTSTGCVGEDPALDQFMEAYCEMLTKYEQELSK 184
           VNCRKVGAPPE VARLE+ CA+AA +SGTS+ C+GEDPALDQFMEAYCEMLTKYEQELSK
Sbjct: 126 VNCRKVGAPPEVVARLEQACASAATISGTSS-CIGEDPALDQFMEAYCEMLTKYEQELSK 185

Query: 185 PFRDAMLFLQRIESQFKALSL--SSDAASGEAFDRNGSSEDEVDINGHSIDPQAEDRELK 244
           PFRDAMLFLQRI+ QFKALS+  SSDAA GEAFDRNGSSE+EVDINGHSIDPQAEDRELK
Sbjct: 186 PFRDAMLFLQRIDCQFKALSISSSSDAACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 245

Query: 245 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 304
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 246 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 305

Query: 305 GLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           GLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS TLL
Sbjct: 306 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL 355

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BLAST of Sed0006486 vs. NCBI nr
Match: XP_008440041.1 (PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo])

HSP 1 Score: 515.4 bits (1326), Expect = 3.8e-142
Identity = 283/362 (78.18%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQ------INNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPL 60
           MDG  G +CS GMMN FGDQ       NNGL SMMMMMPL+S+S    +G    SC  P 
Sbjct: 1   MDGPSG-NCSGGMMN-FGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGS---SCT-PF 60

Query: 61  FPL-PPNYTN-NSHSNPIC-YFMNEANNANSSSSSSSSN-----ELKAKIMSHPHYHRLL 120
            PL PPNY N N+++N IC YFM+E NN N+++S SS+      E+KAKIM+HPHYHRLL
Sbjct: 61  LPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLL 120

Query: 121 NAYVNCRKVGAPPEAVARLEEVCATAAAMSGTST--GCVGEDPALDQFMEAYCEMLTKYE 180
            AYVNCRKVGAPPE VARLEE CA+A  MS  +   GC+GEDPALDQFMEAYCEMLTKYE
Sbjct: 121 TAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYE 180

Query: 181 QELSKPFRDAMLFLQRIESQFKALSLSSD---AASGEAFDRNGSSEDEVDINGHSIDPQA 240
           QELSKPFRDAMLFLQRI+SQFKALS+SS     A GEAFDRNGSSE+EVDINGHSIDPQA
Sbjct: 181 QELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQA 240

Query: 241 EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 300
           EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL
Sbjct: 241 EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 300

Query: 301 ALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHT 344
           ALAQSTGLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS  
Sbjct: 301 ALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPA 356

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BLAST of Sed0006486 vs. NCBI nr
Match: XP_004134981.2 (homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hypothetical protein Csa_003195 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 6.5e-142
Identity = 276/350 (78.86%), Postives = 296/350 (84.57%), Query Frame = 0


Query: 8   SCSSGMMNHFGDQ-----INNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPL-PPNY 67
           +CS GMMN FGDQ      NNGL SMMMMMPL+S+S    +G    SC  P  PL PPNY
Sbjct: 7   NCSGGMMN-FGDQNNNNNNNNGLCSMMMMMPLISASQQGGDGS---SCT-PFLPLPPPNY 66

Query: 68  TNNSHSNPICYFMNEANNANSSSSSSSSN---ELKAKIMSHPHYHRLLNAYVNCRKVGAP 127
            NN++++   YFM+E NN N+  SS+ +N   E+KAKIM+HPHYHRLL AYVNCRKVGAP
Sbjct: 67  NNNNNTSICNYFMDETNNNNNDESSNGANSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAP 126

Query: 128 PEAVARLEEVCATAAAMSGTST--GCVGEDPALDQFMEAYCEMLTKYEQELSKPFRDAML 187
           PE VARLEE CA+A  MS  +   GC+GEDPALDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 127 PEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAML 186

Query: 188 FLQRIESQFKALSLSSD---AASGEAFDRNGSSEDEVDINGHSIDPQAEDRELKGQLLRK 247
           FLQRI+SQFKALS+SS     A GEAFDRNGSSE+EVDINGHSIDPQAEDRELKGQLLRK
Sbjct: 187 FLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRK 246

Query: 248 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ 307
           YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ
Sbjct: 247 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ 306

Query: 308 INNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           INNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS  LL
Sbjct: 307 INNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPALL 351

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BLAST of Sed0006486 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.3e-121
Identity = 245/379 (64.64%), Postives = 288/379 (75.99%), Query Frame = 0


Query: 5   GGSSCSSG--MMNHFGDQINNGLSSMMMMMPLLSSSH---------NNSNGDQD------ 64
           GGSS S+G   +  FG+  + GL   M MMPL++S H         NN+N + +      
Sbjct: 3   GGSSSSNGTSYLLAFGENNSGGLCP-MTMMPLVTSHHAGHHPINPSNNNNVNTNCLFIPN 62

Query: 65  --HSCNHPLFPLPPNYTN-------NSHSNPICYFMNEA---------NNANSSSSSSSS 124
             +S   P   L  N+ N       N+++  + Y+  E+         NN N SSSSSSS
Sbjct: 63  CSNSTGTPSIMLHNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNNGSSSSSSS 122

Query: 125 NELKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSG----TSTGCVGE 184
           + +KAKIM+HPHYHRLL AYVNC+KVGAPPE VARLEE CA+AA M+G      + C+GE
Sbjct: 123 SAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGE 182

Query: 185 DPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSL-SSDAASGEAFDRNG 244
           DPALDQFMEAYCEMLTKYEQELSKP ++AMLFLQRIE QFK L++ SSD AS E  DRNG
Sbjct: 183 DPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNG 242

Query: 245 SSEDEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 304
           SSE++VD++ + IDPQAEDR+LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL+
Sbjct: 243 SSEEDVDLH-NMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLE 302

Query: 305 WWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQY 344
           WW+RHYKWPYPSESQKLALA+STGLDQKQINNWFINQRKRHW PSEDMQFVVMD +HP Y
Sbjct: 303 WWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHY 362

[Close]

BLAST of Sed0006486 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 6.2e-119
Identity = 234/358 (65.36%), Postives = 278/358 (77.65%), Query Frame = 0


Query: 5   GGSSCSSGMMNHFGDQINNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPLF----PLPPN 64
           G +S S  MM  +GD  NN  ++         + + N NG+    C  P+     P PP+
Sbjct: 7   GNTSTSCLMMMGYGDHENNNNNN--------GNGNGNGNGNVT-ICAPPMMMMMPPPPPS 66

Query: 65  YTNNSH----SNPICY--FMNEANNAN-SSSSSSSSNELKAKIMSHPHYHRLLNAYVNCR 124
            TNN++    +N I +  FM+  NN N    ++SSS+ +K+KIM+HPHYHRLL AY+NC+
Sbjct: 67  LTNNNNAETSNNNILFLPFMDNNNNNNPQEDNNSSSSSIKSKIMAHPHYHRLLTAYLNCQ 126

Query: 125 KVGAPPEAVARLEEVCATAAAMSGTST----GCVGEDPALDQFMEAYCEMLTKYEQELSK 184
           K+GAPPE VARLEE+CAT+A M  +S+    G +GEDPALDQFMEAYCEMLTKYEQELSK
Sbjct: 127 KIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKYEQELSK 186

Query: 185 PFRDAMLFLQRIESQFKALSL----SSDAASGEAFDRNGSSEDEVDINGHSIDPQAEDRE 244
           PF++AM+FL RIE QFKAL+L    S ++A GEA DRNGSS++EVD+N   IDPQAEDRE
Sbjct: 187 PFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSFIDPQAEDRE 246

Query: 245 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQ 304
           LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL+DWW RH KWPYPSESQKLALA+
Sbjct: 247 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAE 306

Query: 305 STGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           STGLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHP YYMD+VL N FP+D++ +LL
Sbjct: 307 STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLANHFPMDMTPSLL 355

[Close]

BLAST of Sed0006486 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 419.5 bits (1077), Expect = 3.7e-116
Identity = 244/379 (64.38%), Postives = 277/379 (73.09%), Query Frame = 0


Query: 6   GSSCSSGMMNHFGDQINNGLSSMMMMMPLLSSSHNNSNGDQD--------------HSCN 65
           GS+ +S  M   GD  +  +  MMMMMP + +SH +   D                H  +
Sbjct: 4   GSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQS 63

Query: 66  HPLF---PLPPNYTNN---SHSNPI----CYFMNE-------ANNANSSSSSSSSNELKA 125
             LF     PP  T N   S S+P      Y + E       A   N  SSSSSS  +KA
Sbjct: 64  SSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASVKA 123

Query: 126 KIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGT--STGCVGEDPALDQF 185
           KIM+HPHYHRLL AYVNC+KVGAPPE VARLEE C++AAA + +   TGC+GEDP LDQF
Sbjct: 124 KIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQF 183

Query: 186 MEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAA-SG---EAFDR--NGSS 245
           MEAYCEML KYEQELSKPF++AM+FLQR+E QFK+LSLSS ++ SG    A DR  NGSS
Sbjct: 184 MEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNGSS 243

Query: 246 EDEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 305
           E+EVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW
Sbjct: 244 EEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 303

Query: 306 SRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHP-QYY 344
           SRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHW PSEDMQFVVMDA HP  Y+
Sbjct: 304 SRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYF 363

[Close]

BLAST of Sed0006486 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 9.8e-109
Identity = 232/380 (61.05%), Postives = 267/380 (70.26%), Query Frame = 0


Query: 6   GSSCSSGMMNHFGDQINNGLSSMMMMMPLLSSSHNNSNG-DQDH-----------SCNHP 65
           GS+ +S  M   GD  +  +  MMMMM  + +SH   +G DQ H             +H 
Sbjct: 4   GSNSTSCPMAFAGDNSDGPMCPMMMMMMPVITSHQQHHGHDQQHQHQQQHDGYAYQSHHQ 63

Query: 66  LFPL-------PPNYTNNSHSNPIC--------YFMNEANNANS------SSSSSSSNEL 125
              L       PP+    +     C        Y   E N+ N        S   SS  +
Sbjct: 64  HSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELLAGGLQSPVLSSLLV 123

Query: 126 KAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGT--STGCVGEDPALD 185
           KAKIM+HPHYHRLL AYVNC+KVGAPPE  ARLEE C++AAA + +   TG +GEDP LD
Sbjct: 124 KAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPGLD 183

Query: 186 QFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASG---EAFDR--NGS 245
           QFMEAYCEML KYEQELSKPF++AM+FLQ +E QFK+LSLSS ++ G    A +R  NGS
Sbjct: 184 QFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNNNGS 243

Query: 246 SEDEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 305
           SE+EVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW
Sbjct: 244 SEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 303

Query: 306 WSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHP-QY 344
           WSRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHW PSEDMQFVVMDA HP  Y
Sbjct: 304 WSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPLHY 363

[Close]

BLAST of Sed0006486 vs. ExPASy Swiss-Prot
Match: Q41853 (Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.7e-74
Identity = 148/265 (55.85%), Postives = 188/265 (70.94%), Query Frame = 0


Query: 85  SSSSSNELKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTSTG-CV 144
           S++ +  +KAKI++HP Y  LL AY++C+KVGAPP+    LE + A AA +  ++ G   
Sbjct: 83  SAAEAEAIKAKIVAHPQYSALLAAYLDCQKVGAPPDV---LERLTAMAAKLDASAAGRHE 142

Query: 145 GEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASGE----- 204
             DP LDQFMEAYC ML KY +EL++P  +AM FL+R+E+Q   +S    ++S       
Sbjct: 143 PRDPELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLAD 202

Query: 205 -AFDRNGSSEDEVDINGH-----SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 264
              +  GSSED++D NG       IDP+AED+ELK QLL+KYSGYL SL+QEF KK+KKG
Sbjct: 203 GKSEGVGSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKG 262

Query: 265 KLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDM 324
           KLPKEARQ+LL WW  HYKWPYPSE++K+ALA+STGLDQKQINNWFINQRKRHW PSEDM
Sbjct: 263 KLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDM 322

Query: 325 QFVVMDAAHPQYYMDHVLGNPFPLD 338
            FV+M+  HPQ      +  PF  D
Sbjct: 323 PFVMMEGFHPQNAAALYMDGPFMRD 344

[Close]

BLAST of Sed0006486 vs. ExPASy TrEMBL
Match: A0A6J1BTA7 (homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.4e-142
Identity = 285/356 (80.06%), Postives = 304/356 (85.39%), Query Frame = 0


Query: 5   GGSSCSSGMMNHFGDQINNG--LSSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPLPP--N 64
           GG   SSGMMN FGDQ NN    SSMMMMMPL+SS      GD   S   PL P PP  N
Sbjct: 6   GGGGSSSGMMN-FGDQNNNNGLCSSMMMMMPLMSS----HGGDGACSSFLPLPPPPPPHN 65

Query: 65  Y---TNNSHSNPICYFM------NEANN--ANSSSSSSSSNELKAKIMSHPHYHRLLNAY 124
           Y    NN+ +NPI YFM      N +NN  AN+++SSSSS+++KAKIM+HPHYHRLL AY
Sbjct: 66  YEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPHYHRLLAAY 125

Query: 125 VNCRKVGAPPEAVARLEEVCATAAAMSGTSTGCVGEDPALDQFMEAYCEMLTKYEQELSK 184
           VNCRKVGAPPE VARLE+ CA+AA +SGTS+ C+GEDPALDQFMEAYCEMLTKYEQELSK
Sbjct: 126 VNCRKVGAPPEVVARLEQACASAATISGTSS-CIGEDPALDQFMEAYCEMLTKYEQELSK 185

Query: 185 PFRDAMLFLQRIESQFKALSL--SSDAASGEAFDRNGSSEDEVDINGHSIDPQAEDRELK 244
           PFRDAMLFLQRI+ QFKALS+  SSDAA GEAFDRNGSSE+EVDINGHSIDPQAEDRELK
Sbjct: 186 PFRDAMLFLQRIDCQFKALSISSSSDAACGEAFDRNGSSEEEVDINGHSIDPQAEDRELK 245

Query: 245 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 304
           GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST
Sbjct: 246 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQST 305

Query: 305 GLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           GLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS TLL
Sbjct: 306 GLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL 355

[Close]

BLAST of Sed0006486 vs. ExPASy TrEMBL
Match: A0A1S3B0X4 (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.8e-142
Identity = 283/362 (78.18%), Postives = 303/362 (83.70%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQ------INNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPL 60
           MDG  G +CS GMMN FGDQ       NNGL SMMMMMPL+S+S    +G    SC  P 
Sbjct: 1   MDGPSG-NCSGGMMN-FGDQNNNNNNNNNGLCSMMMMMPLISASQQGGDGS---SCT-PF 60

Query: 61  FPL-PPNYTN-NSHSNPIC-YFMNEANNANSSSSSSSSN-----ELKAKIMSHPHYHRLL 120
            PL PPNY N N+++N IC YFM+E NN N+++S SS+      E+KAKIM+HPHYHRLL
Sbjct: 61  LPLPPPNYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLL 120

Query: 121 NAYVNCRKVGAPPEAVARLEEVCATAAAMSGTST--GCVGEDPALDQFMEAYCEMLTKYE 180
            AYVNCRKVGAPPE VARLEE CA+A  MS  +   GC+GEDPALDQFMEAYCEMLTKYE
Sbjct: 121 TAYVNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYE 180

Query: 181 QELSKPFRDAMLFLQRIESQFKALSLSSD---AASGEAFDRNGSSEDEVDINGHSIDPQA 240
           QELSKPFRDAMLFLQRI+SQFKALS+SS     A GEAFDRNGSSE+EVDINGHSIDPQA
Sbjct: 181 QELSKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQA 240

Query: 241 EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 300
           EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL
Sbjct: 241 EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 300

Query: 301 ALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHT 344
           ALAQSTGLDQKQINNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS  
Sbjct: 301 ALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDAVLGNPFPLDISPA 356

[Close]

BLAST of Sed0006486 vs. ExPASy TrEMBL
Match: A0A0A0KJU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 3.1e-142
Identity = 276/350 (78.86%), Postives = 296/350 (84.57%), Query Frame = 0


Query: 8   SCSSGMMNHFGDQ-----INNGLSSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPL-PPNY 67
           +CS GMMN FGDQ      NNGL SMMMMMPL+S+S    +G    SC  P  PL PPNY
Sbjct: 7   NCSGGMMN-FGDQNNNNNNNNGLCSMMMMMPLISASQQGGDGS---SCT-PFLPLPPPNY 66

Query: 68  TNNSHSNPICYFMNEANNANSSSSSSSSN---ELKAKIMSHPHYHRLLNAYVNCRKVGAP 127
            NN++++   YFM+E NN N+  SS+ +N   E+KAKIM+HPHYHRLL AYVNCRKVGAP
Sbjct: 67  NNNNNTSICNYFMDETNNNNNDESSNGANSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAP 126

Query: 128 PEAVARLEEVCATAAAMSGTST--GCVGEDPALDQFMEAYCEMLTKYEQELSKPFRDAML 187
           PE VARLEE CA+A  MS  +   GC+GEDPALDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 127 PEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAML 186

Query: 188 FLQRIESQFKALSLSSD---AASGEAFDRNGSSEDEVDINGHSIDPQAEDRELKGQLLRK 247
           FLQRI+SQFKALS+SS     A GEAFDRNGSSE+EVDINGHSIDPQAEDRELKGQLLRK
Sbjct: 187 FLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDRELKGQLLRK 246

Query: 248 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ 307
           YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ
Sbjct: 247 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQ 306

Query: 308 INNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLDISHTLL 344
           INNWFINQRKRHW PSEDMQFVVMDAAHPQYYMD VLGNPFPLDIS  LL
Sbjct: 307 INNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPALL 351

[Close]

BLAST of Sed0006486 vs. ExPASy TrEMBL
Match: A0A6J1EG52 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111433869 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.0e-142
Identity = 289/366 (78.96%), Postives = 306/366 (83.61%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQ--INNGL-SSMMMMMPLLSSSHNNSNGDQDHSCNHPLFPL 60
           MDG GGS  SSGMMN FGDQ   NNGL SSMMMMMPL+SS H++ +  Q  +CN P  PL
Sbjct: 1   MDGPGGS--SSGMMN-FGDQNNSNNGLCSSMMMMMPLMSSHHHHHH-HQGDACN-PFPPL 60

Query: 61  P-PNYTNN--------SHSNPICYFMNE------ANNANSS---SSSSSSNELKAKIMSH 120
           P PNYT N        S SNPICYFM+E       NN N +   +++SSS ELKAKIM H
Sbjct: 61  PSPNYTTNNINNTNTSSSSNPICYFMDEHTTTTTTNNNNDNGCCNANSSSCELKAKIMGH 120

Query: 121 PHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTS-TGCVGEDPALDQFMEAYCE 180
           PHYHRLL AYVNCRKVGAPP+ VARLE  CA+A  +SGTS TGC+GEDPALDQFMEAYCE
Sbjct: 121 PHYHRLLAAYVNCRKVGAPPDVVARLEGACASALTISGTSCTGCIGEDPALDQFMEAYCE 180

Query: 181 MLTKYEQELSKPFRDAMLFLQRIESQFKALSL-SSDAASGEAFDRNGSSEDEVDINGHSI 240
           MLTKYEQELSKPFRDAMLFL RIE QFKALS+ SSDA  GEAF+RNGSSE+EVDINGHSI
Sbjct: 181 MLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAVCGEAFERNGSSEEEVDINGHSI 240

Query: 241 DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 300
           DPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE
Sbjct: 241 DPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 300

Query: 301 SQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPFPLD 344
           SQKLALAQSTGLDQKQINNWFINQRKRHW PSEDMQFVVMD  HPQYYMD VLGNPFPLD
Sbjct: 301 SQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTVLGNPFPLD 360

[Close]

BLAST of Sed0006486 vs. ExPASy TrEMBL
Match: A0A6J1KQV1 (homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111497440 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.5e-141
Identity = 289/369 (78.32%), Postives = 305/369 (82.66%), Query Frame = 0


Query: 1   MDGCGGSSCSSGMMNHFGDQ--INNGL-SSMMMMMPLLSS----SHNNSNGDQDHSCNHP 60
           MDG GGS  SSGMMN FGDQ   NNGL SSMMMMMPL+SS     H++ +  Q  +CN P
Sbjct: 1   MDGPGGS--SSGMMN-FGDQNNSNNGLCSSMMMMMPLMSSHQHHHHHHHHHHQGDACN-P 60

Query: 61  LFPLP-PNYTNN--------SHSNPICYFMNE---ANNANSSS-----SSSSSNELKAKI 120
             PLP PNYT N        S SNPICY M+E    NN N++      ++SSS ELKAKI
Sbjct: 61  FPPLPSPNYTTNNISNTNTSSSSNPICYLMDENTTINNNNNNDNGCGHANSSSCELKAKI 120

Query: 121 MSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTS-TGCVGEDPALDQFMEA 180
           M HPHYHRLL AYVNCRKVGAPPE VARLE  CA+A  MSGTS TGC+GEDPALDQFMEA
Sbjct: 121 MGHPHYHRLLAAYVNCRKVGAPPEVVARLEGACASALTMSGTSCTGCIGEDPALDQFMEA 180

Query: 181 YCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSL-SSDAASGEAFDRNGSSEDEVDING 240
           YCEMLTKYEQELSKPFRDAMLFL RIE QFKALS+ SSDA  GEAF+RNGSSE+EVDING
Sbjct: 181 YCEMLTKYEQELSKPFRDAMLFLHRIECQFKALSISSSDAVCGEAFERNGSSEEEVDING 240

Query: 241 HSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPY 300
           HSIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPY
Sbjct: 241 HSIDPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPY 300

Query: 301 PSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYYMDHVLGNPF 344
           PSESQKLALAQSTGLDQKQINNWFINQRKRHW PSEDMQFVVMD  HPQYYMD +LGNPF
Sbjct: 301 PSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGGHPQYYMDTMLGNPF 360

[Close]

BLAST of Sed0006486 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 419.5 bits (1077), Expect = 2.7e-117
Identity = 244/379 (64.38%), Postives = 277/379 (73.09%), Query Frame = 0


Query: 6   GSSCSSGMMNHFGDQINNGLSSMMMMMPLLSSSHNNSNGDQD--------------HSCN 65
           GS+ +S  M   GD  +  +  MMMMMP + +SH +   D                H  +
Sbjct: 4   GSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQS 63

Query: 66  HPLF---PLPPNYTNN---SHSNPI----CYFMNE-------ANNANSSSSSSSSNELKA 125
             LF     PP  T N   S S+P      Y + E       A   N  SSSSSS  +KA
Sbjct: 64  SSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASVKA 123

Query: 126 KIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGT--STGCVGEDPALDQF 185
           KIM+HPHYHRLL AYVNC+KVGAPPE VARLEE C++AAA + +   TGC+GEDP LDQF
Sbjct: 124 KIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQF 183

Query: 186 MEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAA-SG---EAFDR--NGSS 245
           MEAYCEML KYEQELSKPF++AM+FLQR+E QFK+LSLSS ++ SG    A DR  NGSS
Sbjct: 184 MEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNGSS 243

Query: 246 EDEVDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 305
           E+EVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW
Sbjct: 244 EEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 303

Query: 306 SRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHP-QYY 344
           SRHYKWPYPSE QKLALA+STGLDQKQINNWFINQRKRHW PSEDMQFVVMDA HP  Y+
Sbjct: 304 SRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYF 363

[Close]

BLAST of Sed0006486 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 279.6 bits (714), Expect = 3.3e-75
Identity = 162/325 (49.85%), Postives = 217/325 (66.77%), Query Frame = 0


Query: 28  MMMMMPLLSSSHNNSNGDQDHSCNHPLFPLPPNYTNNSHSNPICYFMNEANNANSSSSSS 87
           M  ++P  + +   S+ DQ ++ N+P      + +  +H + +   ++    AN++++ +
Sbjct: 68  MSSLLPQTTENCFRSDHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNNNNDN 127

Query: 88  SSN--ELKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCATAAAMSGTSTGCV-- 147
            S+   +KAKI++HPHY  LL AY++C+K+GAPP+ V R+        A    ST  V  
Sbjct: 128 VSDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSA 187

Query: 148 -GEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSS----DAASGE 207
              DP LDQFMEAYC+ML KY +EL++P ++AM F++RIESQ   L  S     +   G+
Sbjct: 188 SSRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGK 247

Query: 208 AFDRNGSSEDEVDING------HSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 267
           + D  GSS++E + N         IDP+AEDRELK  LL+KYSGYL SLKQE  KK+KKG
Sbjct: 248 S-DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKG 307

Query: 268 KLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDM 327
           KLPKEARQ+LL WW  HYKWPYPSES+K+ALA+STGLDQKQINNWFINQRKRHW PSEDM
Sbjct: 308 KLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDM 367

Query: 328 QFVVMDA-AHPQY---YMD-HVLGN 333
           QF+VMD   HP +   YMD H +G+
Sbjct: 368 QFMVMDGLQHPHHAALYMDGHYMGD 391

[Close]

BLAST of Sed0006486 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-65
Identity = 123/242 (50.83%), Postives = 165/242 (68.18%), Query Frame = 0


Query: 92  LKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVC--ATAAAMSGTSTGCVGEDPAL 151
           +KAKI  HP Y RLL AY++C+KVGAPPE    LEE+   +         + C G DP L
Sbjct: 85  IKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPEL 144

Query: 152 DQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASGEAFDRNGSSEDE 211
           D+FME YC++L KY+ +L++PF +A  FL +IE Q + L    ++A G + D   SS++E
Sbjct: 145 DEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEE 204

Query: 212 VDINGHSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 271
           +    H +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LLDW
Sbjct: 205 LSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDW 264

Query: 272 WSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQYY 328
           W+ HYKWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHW PSE+M F +MD +   ++
Sbjct: 265 WNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFF 324

[Close]

BLAST of Sed0006486 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 241.9 bits (616), Expect = 7.6e-64
Identity = 123/244 (50.41%), Postives = 165/244 (67.62%), Query Frame = 0


Query: 92  LKAKIMSHPHYHRLLNAYVNCRK--VGAPPEAVARLEEVC--ATAAAMSGTSTGCVGEDP 151
           +KAKI  HP Y RLL AY++C+K  VGAPPE    LEE+   +         + C G DP
Sbjct: 85  IKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADP 144

Query: 152 ALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASGEAFDRNGSSE 211
            LD+FME YC++L KY+ +L++PF +A  FL +IE Q + L    ++A G + D   SS+
Sbjct: 145 ELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSD 204

Query: 212 DEVDINGHSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL 271
           +E+    H +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LL
Sbjct: 205 EELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALL 264

Query: 272 DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAHPQ 328
           DWW+ HYKWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHW PSE+M F +MD +   
Sbjct: 265 DWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGS 324

[Close]

BLAST of Sed0006486 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 233.4 bits (594), Expect = 2.7e-61
Identity = 120/246 (48.78%), Postives = 164/246 (66.67%), Query Frame = 0


Query: 88  SSNELKAKIMSHPHYHRLLNAYVNCRKVGAPPEAVARLEEVCAT--AAAMSGTSTGCVGE 147
           S + +K+KI SHP Y RLL  Y++C+KVGAP E    LEE+               C G 
Sbjct: 65  SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGA 124

Query: 148 DPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIESQFKALSLSSDAASGEAFDRNGS 207
           DP LD+FME YC++L KY+ +L++PF +A  F+ +IE Q + L     +A+  + D   S
Sbjct: 125 DPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDGAVS 184

Query: 208 SEDEV----DINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQ 267
           S++E+    DI       ++ DR+LK QLLRK+  ++ SLK EF KK+KKGKLP+EARQ 
Sbjct: 185 SDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQA 244

Query: 268 LLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWNPSEDMQFVVMDAAH 327
           LLDWW+ H KWPYP+E  K++LA+ TGLDQKQINNWFINQRKRHW PSE+M F +MD ++
Sbjct: 245 LLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSN 304

The following BLAST results are available for this feature:

BLAST of Sed0006486 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883370.1	1.7e-142	78.43	homeobox protein knotted-1-like LET6 [Benincasa hispida]	[more]
XP_023518637.1	2.2e-142	78.96	homeobox protein knotted-1-like LET6 [Cucurbita pepo subsp. pepo]	[more]
XP_022132524.1	2.9e-142	80.06	homeobox protein SBH1 [Momordica charantia]	[more]
XP_008440041.1	3.8e-142	78.18	PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo]	[more]
XP_004134981.2	6.5e-142	78.86	homeobox protein knotted-1-like LET6 [Cucumis sativus] >KGN49079.1 hypothetical ...	[more]

BLAST of Sed0006486 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46608	1.3e-121	64.64	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
O22299	6.2e-119	65.36	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]
Q38874	3.7e-116	64.38	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
Q9M6D9	9.8e-109	61.05	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=...	[more]
Q41853	2.7e-74	55.85	Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1	[more]

BLAST of Sed0006486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTA7	1.4e-142	80.06	homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1	[more]
A0A1S3B0X4	1.8e-142	78.18	homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=...	[more]
A0A0A0KJU4	3.1e-142	78.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513430 PE=3 SV=1	[more]
A0A6J1EG52	7.0e-142	78.96	homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114338...	[more]
A0A6J1KQV1	4.5e-141	78.32	homeobox protein knotted-1-like LET6 OS=Cucurbita maxima OX=3661 GN=LOC111497440...	[more]

BLAST of Sed0006486 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62360.1	2.7e-117	64.38	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	3.3e-75	49.85	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G23380.1	2.4e-65	50.83	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	7.6e-64	50.41	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	2.7e-61	48.78	KNOTTED-like from Arabidopsis thaliana 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 139..190 e-value: 8.7E-25 score: 98.4
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 142..188 e-value: 7.6E-21 score: 73.4
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 225..246 e-value: 2.8E-8 score: 43.5
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 225..246 e-value: 3.5E-11 score: 42.9
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 225..245 score: 11.173647
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 90..134 e-value: 1.5E-19 score: 80.9
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 92..130 e-value: 8.6E-21 score: 73.4
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 247..312 e-value: 1.7E-12 score: 57.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 245..308 score: 12.648952
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 257..309 e-value: 4.11525E-12 score: 58.7941
None	No IPR available	GENE3D	1.10.10.60		coord: 243..314 e-value: 2.8E-26 score: 92.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..219
None	No IPR available	PANTHER	PTHR11850:SF297	SUBFAMILY NOT NAMED	coord: 2..332
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 2..332
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 265..304 e-value: 6.0E-17 score: 61.3
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 247..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006486.1	Sed0006486.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005768	endosome
cellular_component	GO:0015630	microtubule cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding