Sed0006483 (gene) Chayote v1

Overview


Name	Sed0006483
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein TIC 214
Location	Contig00297: 84112 .. 85555 (-)
RNA-Seq Expression	Sed0006483
Synteny	Sed0006483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGGAACTGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATACAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTGGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGATATACAGCAAAATAATTTATTAGATCTAATGTACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTGATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATACTGTCACCCATTCTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGCAAAGGGGGAAAGGAGAAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAGGAACAGGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGAAACTTCTTACCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAGAAAAATATCTCTTCTGGTTTGAAAACCTCTTGTGACTATTCTTTCGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGATAAATTTGAAAATGCGATTAGAACTCAAATGTCACAATATTTTTTTTATACATGTAAAAGTGACGGAAAAGACAGAATCGTTTTTACACATCCACCTAGTGTATCAACTTTTTTTGAAATGATACAAAAAAAGATATCTTTGTTCACAAGAGAAAAACTTTCGTATGATGAATTGGATAATCCGTGGAATTATCTCAATGAACAAAAAAAAATAAATTTAAACAAAAAATTTATAACTAGAATTCAAATTCTGGATAAGGGATCCCTTATTCTAGCTCGGGATGTACTGGAAAAAAGGACTCATTTATGTAATGATAAAACTCAAAAGTACTATTTACCAAAAATATATGATCCTTTGTTGAGCGGCCCTTACCGCAAACGAATCCTTTTTTTTTTTTTCATTGAGAATGAAAAAAAAAACTTCTATAAAAAATGA

mRNA sequence

ATGGAAGAAGGAACTGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGACTCATTTATGTAATGATAAAACTCAAAAGTACTATTTACCAAAAATATATGATCCTTTGTTGAGCGGCCCTTACCGCAAACGAATCCTTTTTTTTTTTTTCATTGAGAATGAAAAAAAAAACTTCTATAAAAAATGA

Coding sequence (CDS)

ATGGAAGAAGGAACTGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGACTCATTTATGTAATGATAAAACTCAAAAGTACTATTTACCAAAAATATATGATCCTTTGTTGAGCGGCCCTTACCGCAAACGAATCCTTTTTTTTTTTTTCATTGAGAATGAAAAAAAAAACTTCTATAAAAAATGA

Protein sequence

MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRILFFFFIENEKKNFYKK

Homology

[Close]

BLAST of Sed0006483 vs. NCBI nr
Match: QJC13097.1 (hypothetical chloroplast RF19 [Glycyrrhiza inflata] >QJQ76805.1 hypothetical chloroplast RF19 [Glycyrrhiza inflata] >QJQ76881.1 hypothetical chloroplast RF19 [Glycyrrhiza inflata])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. NCBI nr
Match: YP_009828130.1 (hypothetical chloroplast RF19 [Glycyrrhiza aspera] >QJQ76895.1 hypothetical chloroplast RF19 [Glycyrrhiza laxissima] >QJC13173.1 hypothetical chloroplast RF19 [Glycyrrhiza aspera] >QJQ74981.1 hypothetical chloroplast RF19 [Glycyrrhiza aspera] >QJQ75057.1 hypothetical chloroplast RF19 [Glycyrrhiza aspera] >QJQ75133.1 hypothetical chloroplast RF19 [Glycyrrhiza aspera])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. NCBI nr
Match: QJQ75665.1 (hypothetical chloroplast RF19 [Glycyrrhiza echinata] >QJQ75679.1 hypothetical chloroplast RF19 [Glycyrrhiza echinata])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. NCBI nr
Match: YP_009766299.1 (Ycf1 [Acacia podalyriifolia] >YP_009766319.1 Ycf1 [Acacia podalyriifolia] >QIS96659.1 Ycf1 [Acacia podalyriifolia] >QIS96679.1 Ycf1 [Acacia podalyriifolia])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHL----CNDKTQ 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTIT +ALP  L    CND   
Sbjct: 50  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITFIALPYFLFHFFCNDNNN 109

[Close]

BLAST of Sed0006483 vs. NCBI nr
Match: AOV83520.1 (Ycf1 [Glycyrrhiza glabra])

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 50 MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 50 MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 96

[Close]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot
Match: Q3C1P6 (Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 50 MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 96

HSP 2 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 40  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI 77
           ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Sbjct: 491 SLDILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTI 527

[Close]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot
Match: Q33BW4 (Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 50 MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 96

HSP 2 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 40  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI 77
           ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Sbjct: 488 SLDILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTI 524

[Close]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot
Match: Q2MIC9 (Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-19
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 50 MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 96

HSP 2 Score: 50.1 bits (118), Expect = 1.6e-05
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 40  TITVLALPTHLCNDKTQKYYLPKIYDPLLSGPYRKRI 77
           ++ +L   T LCND T+K Y+PK+YDPLL+GPYR  I
Sbjct: 491 SMDILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTI 527

[Close]

BLAST of Sed0006483 vs. ExPASy TrEMBL
Match: A0A6M4ECN4 (Protein TIC 214 OS=Meristotropis bucharica OX=2731868 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. ExPASy TrEMBL
Match: A0A6M4ECK1 (Protein TIC 214 OS=Meristotropis xanthioides OX=2699351 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. ExPASy TrEMBL
Match: A0A6M4EBW8 (Protein TIC 214 OS=Glycyrrhiza triphylla OX=754883 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. ExPASy TrEMBL
Match: A0A6M4EAJ0 (Protein TIC 214 OS=Glycyrrhiza yunnanensis OX=912971 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. ExPASy TrEMBL
Match: A0A6M4E446 (Protein TIC 214 OS=Glycyrrhiza echinata OX=46348 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPTHLCN--DKTQKY 60
           MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITV+ LP  L +  DK  K+
Sbjct: 49  MEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVITLPYLLFHFFDKNSKH 108

Query: 61  YLPKIYDP 67
           +L +  +P
Sbjct: 109 FLNRYKNP 116

[Close]

BLAST of Sed0006483 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 54 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALP 99

[Close]

BLAST of Sed0006483 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 2   EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
           EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 55  EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALP 100

[Close]

BLAST of Sed0006483 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 2   EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
           EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 55  EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALP 100

[Close]

BLAST of Sed0006483 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0


Query: 2  EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALP 48
          EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLALP
Sbjct: 54 EEGTEKKVSATTGFIAGQLMMFISIYYAPLHLALGRPHTITVLALP 99

The following BLAST results are available for this feature:

BLAST of Sed0006483 vs. NCBI nr


Match Name	E-value	Identity	Description
QJC13097.1	1.3e-17	75.00	hypothetical chloroplast RF19 [Glycyrrhiza inflata] >QJQ76805.1 hypothetical chl...	[more]
YP_009828130.1	1.3e-17	75.00	hypothetical chloroplast RF19 [Glycyrrhiza aspera] >QJQ76895.1 hypothetical chlo...	[more]
QJQ75665.1	1.3e-17	75.00	hypothetical chloroplast RF19 [Glycyrrhiza echinata] >QJQ75679.1 hypothetical ch...	[more]
YP_009766299.1	1.3e-17	79.69	Ycf1 [Acacia podalyriifolia] >YP_009766319.1 Ycf1 [Acacia podalyriifolia] >QIS96...	[more]
AOV83520.1	1.3e-17	75.00	Ycf1 [Glycyrrhiza glabra]	[more]

BLAST of Sed0006483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM95	2.5e-19	100.00	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A0A393	2.5e-19	100.00	Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1	[more]
Q3C1P6	2.5e-19	100.00	Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1	[more]
Q33BW4	2.5e-19	100.00	Protein TIC 214 OS=Nicotiana tomentosiformis OX=4098 GN=TIC214 PE=3 SV=1	[more]
Q2MIC9	2.5e-19	100.00	Protein TIC 214 OS=Solanum bulbocastanum OX=147425 GN=TIC214 PE=3 SV=1	[more]

BLAST of Sed0006483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M4ECN4	6.5e-18	75.00	Protein TIC 214 OS=Meristotropis bucharica OX=2731868 GN=ycf1 PE=3 SV=1	[more]
A0A6M4ECK1	6.5e-18	75.00	Protein TIC 214 OS=Meristotropis xanthioides OX=2699351 GN=ycf1 PE=3 SV=1	[more]
A0A6M4EBW8	6.5e-18	75.00	Protein TIC 214 OS=Glycyrrhiza triphylla OX=754883 GN=ycf1 PE=3 SV=1	[more]
A0A6M4EAJ0	6.5e-18	75.00	Protein TIC 214 OS=Glycyrrhiza yunnanensis OX=912971 GN=ycf1 PE=3 SV=1	[more]
A0A6M4E446	6.5e-18	75.00	Protein TIC 214 OS=Glycyrrhiza echinata OX=46348 GN=ycf1 PE=3 SV=1	[more]

BLAST of Sed0006483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07739.1	2.6e-19	97.83	Ycf1 protein	[more]
ATCG01130.1	2.6e-19	97.83	Ycf1 protein	[more]
ATCG01000.1	2.6e-19	97.83	Ycf1 protein	[more]
ATMG00370.1	2.6e-19	97.83	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 48..83 e-value: 1.9E-8 score: 32.7 coord: 2..48 e-value: 1.9E-28 score: 98.9
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 48..87 coord: 2..48
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 48..87 coord: 2..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006483.1	Sed0006483.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane