Sed0006467 (gene) Chayote v1

Overview
NameSed0006467
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
LocationLG08: 29530446 .. 29535357 (-)
RNA-Seq ExpressionSed0006467
SyntenySed0006467
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAAAGGTAAACAAAAAAACCCTAATTTCTCTGCACAGCCGCCCCTTTCTCACGCATCTCTTTCTCTGCTGCTCGGTTTTTTTTTTTGGGACAAAATCTCTGTATTCAAAGAACGAATGAAGTTCTTTGCTGCTATTCATCTTCGACGATTCTTAGATAGTAAAAAAGGTATGATTTGTTTTTTGAATCGTTTCTTTTTAACTCTGAAAACGTCCGATTCGAGCGAAATGCGATTCAAAATTACGATGTGAATCAATTTCTTCACGATTCGTTTTGAATCGCAAAACACCCGTTTTTGATAACCTTGCATAGAGGCATTTAGGTTTGTCATTAAATTATGTTACTCTTCGATTTTTGCTAAATCACATCAACAAATTCTCAAATTGTTCTTTGATTGTGCCTGTATGTATTTCTGATGCACTTTTGTTCATTTTCCTCTTTAGCTATTGGATTCCTCATGTATTGGGAACTTATTAGTTAAACTGCAAATTATGTGACACTATAGTAGTCTTGATATACTTTCCCTCGGACTTAATCATAACTTGATCTTAATAGTCTTTAAAGGTTTAAGACTATCATCATAGTTGAGGTTTAGTTTTAATTTAATCACTAAAGTTTAGTTATATCTTGTGATGCTCGAGTTCATGAAGTTTATATGAATGAATCATAACCAAACTGAAGTATTTTATTAGTACGGTTTTCCCTAAGCGGTGGCACAAGTGGTTGAGGGCTTGGGCTTTGAAGGTGTGCTTCCCTCAAGGTCCTAGGTTTGAGACTCACCCGTGAAATTAATTTGTAGATACCCCCCGGATCTCTATTCCTTCGATGTATCCCGGTGCCTTACTTAGGGACGGGCATGGTTACCCCAAGTATAATGGAGCGAAGCTACGATTTCCCGGTTTTAAAAAAATGTAAGTACGGTTAAGAAAAACTTAGAAAAATTGAAGTTACTACCTACGAGTAAATGCACATTCTCTTCAGTTGTTAAATCATATGAACTCTAAAATTAAGGCGTTTAGCTTGAAACAATGCTATGTGGTGACCTCTTAGGATTTTTCTTAAAAAATGTGAGTGAAAACAAAACATGTTGAAAGGAACTCATATTAGTATGTAAGAATAGTCTTTACTCTTAGAAGCAGTTAGACAAGTAGGTAGTGTGGGGTTAGGTTGCATGAATAATGAGGAATGTCAAAGTTGTTGGGTGCAATATCCAGATTTCAAATCCTAGTCTACCTTAAGATCAATCAATATTTAACCATTCATTGACTTTGGTTTGCAACATGCCAGTGGGTCGAATTTGTTTCGATGTTTGTTTAAAATGTGGTAATCGTATATCTAACGATGTCTCAACCATTAGAATCTTATATGTCAAGGCCATGAAACATTGGTTTTTCTCGTCATTAATGACATTATTTGATAAAATGTTAGGGTTTGATATCAACCATACTTTTGTGAGCCATAATAACATTTCTCTAAATCTTTAATTTTGCAGATAACGCTAACTTGGAGAAAGTTTATATCTTGCTAGTATGAGGCGGTGCTACCATTGAATATTTTTCAGTTTGTCTTGAAGATTTGTTTTATTGTGGAGAAAATGCTTGGCTCGTTTGGACCAATCTTGACTCTTCCAGCCCCTTCGGAGGATTCCAAACCTGTTGTTCATGATGAAATTATTATTAACAATGAGGTGGATAAAGACAATTCGAACTCTACACCTGTATCAATTGCAACTCATACTAAAACCATTGGTATCATACATCCTCCTCCAGACATCAGAAGCATTGTTGATAAAACTGGACAATTTGTTGCAAAAAATGGACCGGAATTTGAGAAAAGGATCATTGCAAATAATGCCGGTAATGTCAAGTTTAATTTCTTGAATTCCTCAGATCCCTACCATGCTTACTATCAACATAGGTTGTCCGAGTTTCGTGCCCAGAATCAGTCGTCTGCACAACAACCTTCAGAAGCTGCAGATTCTGCTGCATCTGTATCAGGCTCATCTGGTCCAGCTGCTGATAGCAATGAAACAATGGTAGCAAAGCCTGACGTTTCTGCTTTGTTCAAACCTGTACGCAAAATTCTTGAGCCTCCAGAGGCTGAGCAGTATACTGTTCGTCTTCCTGAAGGAATTACAGGGGAAGAATTGGATATTATCAAGCTCACAGCCCAATTTGTTGCCCGAAATGGGAAATCATTCTTGACAGGATTGACAAGTAGAGAGATTAATAATCCCCAGTTTCATTTTCTTAAACCAACTCATAGTATGTTCATGTTTTTTACCTCGCTTGCGGATGCATATTCAAAAGTGTTGATGCCTCCCAAGGGGTTGACTGAGAAATTGAAGAAGAGTGTTACTGACATGACAACAGTACTTGAGAGATGCGTGCATAGACTTGAGTGGGAACGTTCACAAGACCAAGCAAGGCAAAAAGCTGAAGACGAGATTGAGCAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTCGTGGTTGAGGCAATAGACTTTGCAGATGACGAGGATGAAGAGTTACCTCCACCAATGACTCTTGAGGAGGTCATTAGAAAGAGCAAGATTTCAGTTGCCGAGGAAGAGATTGTTGAGCCTGGGAAGGAGATGGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGTATGCGGGCGACTAAGTTAGGAGAAAATGACAATGACAAGAATGATATGAAGGTAGATGAGCAGCCGGAGCCACCAATGAGAATTGTAAAGAACTGGAAGAGGCCTGAAGAGAGGATTTCTACAGAAAAAGAGCATACAAAATTTGTTGTCTCTCCCATCACCGGTGAACTAATTCCGATCAATGAGATGTCTGAACACATGAGGATTTCACTTATTGATCCAAAATACAAAGAGCAAAAGGAAAGAATGTTTGCCAAGATACGGGAGACTACTCTTGCTCAAGATGACGAGATCTCACGAAATATCGTTGGACTGGCCCGACTTCGTCCTGATATATTTGGTACCACTGAGGAGGAAGTATCAAACGCAGTCAAGGCAGAAATTGAAAAGAAAGACGATCAGCCAAAACAGGTCATATGGGATGGCCACACTGGAAGCATTGGGCGTACTGCAAATCAAGCTATGTCACAGAATGTGGTTGGAGAGGATCAGAATGATGCTACTAACAACGATGCAAGGAATCTTCCCGGTCCTGCAGCTCTACCACCCAAACCTGGAGTTCCATCAGTTCGTCCTCTCCCGCCTCCACCTGGATTAGCCTTGAATCTTCCTTCCCTACCTCCAAATGCACACTATTCTACCCAAATTAGTGGTGGGCTTCCTGTACCCCCGCCACCACAGCCGCCTGTTATTTCAATGATTCCACCTGTTCAGCCACCACATCTTGCAATTCCTGGACATCATTCATTTTTCATGAATCGGCCTCCTTCTATTCCTCCGCCAATGTCTATGAATGCACCAAATATGAATGTCCCACCGCCACCCGGATCTCAGTTTACTCCATTGCCAGTTCCACGACCTTTTGTTCCTCTCCCTGCTCCTCCACCTATGAATACTATGATGATGCCTCCACCTATGCCGCAAGGAGTTCCTCCACCACCTATGCCCCAAGGATCGCTGCCTCCGTTACCACCCGATGAAGCTCCTCCACCCCTTCCAGAGGAACCAGAGCCAAAGAGACAAAAGCTTGATGATTCTTTGCTTGTGCCTGAAGACCAGTTTTTGGCTCAACATCCAGTATGCTTATTTTATTTTTTGTCTTTCCATCTGTTATGTTCATGTCTCACTAACATCTTTGGCTATTTTACTTAAAGAGTTATTTTATATTTGGTTTCAGGGACCTGTTCGCATCACTGTATCTGTTCCTAATTTTGATGATGGAAACCTCAAAGGCCAAGTTCTGGAGATCACAGTTCAAACCTTAACCGAAACCGTTGGAAGTTTAAAAGAGAAGATTGCCGGCGAGATCCAACTTCCAGCAAACAAACAGAAATTGAGTGGAAAACCTGGGTTTCTCAAGGACAATCTGTCGCTTGCATATTACAATGTTGGAGCAGGGGAACCACTTTCCCTCTCTTTAAGGGAACGTGGTGGTAGAAAGAGATGAACAGATATCCTTGTAGCCGCAACAGAGTAGTAGAGGTTTTAACTATATAGACTTTCCTAGCATATTTAGACTGTTGTATGTTTCAATTTTCAAATCTAAGTGTATTAATTTTCAACTCCCCCTCCCCATCTCAATGAGACTACAAAATTGCTCCCTGACTGTTTTTATGATTTATGATATATATATGTCCGAATTTTGAGGGTTTGATTGTGTCAACATAACTACAAACCTCAAAGGGATGCACAATGGATGTGCTTGAGATTCAACCGAGAAACATGGAACTCGGTCTGGCCCGGCCCACCCTGGATACAAAGCCTATTTGCTATCTCAAATCTCTGGCCCGCCCAGTTCAACCTTCAACTGCCTTCATCTTTCCCACTGTATGTCATCTACTTAATCTTATTTTCTTCCGATTGTGCTTTCTCTTTCTTTTTTAGTACAATTTGGGGGAAGGGGATACCAATTTTAGGGATTGAACCCATGACTGTGGAGTGAAAATGGATTAACACGAAATCAGATAACCAATTGCACCACTGACCCATTTGATGTGGTTTCTCTTTCTTAGTAACAACATTTGAGACGCTGAATGTTACACGTAATGAAATGTTCATGTTGTAATGTATATTACATACAATCTTGAGAGACAGGATCTAGATGTATGTGGTGCATGTGAGAATAGCAAATTGCAAGGAGGCAAGAAGGACAGGATAAGGTAGTTAACTGTCAGTAAACACCTACACTTCTGGTTGTTTCAAGTACAGGCACAAGCAAGAATTTAGGAAGAAACAAA

mRNA sequence

GTAAAAGGTAAACAAAAAAACCCTAATTTCTCTGCACAGCCGCCCCTTTCTCACGCATCTCTTTCTCTGCTGCTCGGTTTTTTTTTTTGGGACAAAATCTCTGTATTCAAAGAACGAATGAAGTTCTTTGCTGCTATTCATCTTCGACGATTCTTAGATAGTAAAAAAGATAACGCTAACTTGGAGAAAGTTTATATCTTGCTAGTATGAGGCGGTGCTACCATTGAATATTTTTCAGTTTGTCTTGAAGATTTGTTTTATTGTGGAGAAAATGCTTGGCTCGTTTGGACCAATCTTGACTCTTCCAGCCCCTTCGGAGGATTCCAAACCTGTTGTTCATGATGAAATTATTATTAACAATGAGGTGGATAAAGACAATTCGAACTCTACACCTGTATCAATTGCAACTCATACTAAAACCATTGGTATCATACATCCTCCTCCAGACATCAGAAGCATTGTTGATAAAACTGGACAATTTGTTGCAAAAAATGGACCGGAATTTGAGAAAAGGATCATTGCAAATAATGCCGGTAATGTCAAGTTTAATTTCTTGAATTCCTCAGATCCCTACCATGCTTACTATCAACATAGGTTGTCCGAGTTTCGTGCCCAGAATCAGTCGTCTGCACAACAACCTTCAGAAGCTGCAGATTCTGCTGCATCTGTATCAGGCTCATCTGGTCCAGCTGCTGATAGCAATGAAACAATGGTAGCAAAGCCTGACGTTTCTGCTTTGTTCAAACCTGTACGCAAAATTCTTGAGCCTCCAGAGGCTGAGCAGTATACTGTTCGTCTTCCTGAAGGAATTACAGGGGAAGAATTGGATATTATCAAGCTCACAGCCCAATTTGTTGCCCGAAATGGGAAATCATTCTTGACAGGATTGACAAGTAGAGAGATTAATAATCCCCAGTTTCATTTTCTTAAACCAACTCATAGTATGTTCATGTTTTTTACCTCGCTTGCGGATGCATATTCAAAAGTGTTGATGCCTCCCAAGGGGTTGACTGAGAAATTGAAGAAGAGTGTTACTGACATGACAACAGTACTTGAGAGATGCGTGCATAGACTTGAGTGGGAACGTTCACAAGACCAAGCAAGGCAAAAAGCTGAAGACGAGATTGAGCAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTCGTGGTTGAGGCAATAGACTTTGCAGATGACGAGGATGAAGAGTTACCTCCACCAATGACTCTTGAGGAGGTCATTAGAAAGAGCAAGATTTCAGTTGCCGAGGAAGAGATTGTTGAGCCTGGGAAGGAGATGGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGTATGCGGGCGACTAAGTTAGGAGAAAATGACAATGACAAGAATGATATGAAGGTAGATGAGCAGCCGGAGCCACCAATGAGAATTGTAAAGAACTGGAAGAGGCCTGAAGAGAGGATTTCTACAGAAAAAGAGCATACAAAATTTGTTGTCTCTCCCATCACCGGTGAACTAATTCCGATCAATGAGATGTCTGAACACATGAGGATTTCACTTATTGATCCAAAATACAAAGAGCAAAAGGAAAGAATGTTTGCCAAGATACGGGAGACTACTCTTGCTCAAGATGACGAGATCTCACGAAATATCGTTGGACTGGCCCGACTTCGTCCTGATATATTTGGTACCACTGAGGAGGAAGTATCAAACGCAGTCAAGGCAGAAATTGAAAAGAAAGACGATCAGCCAAAACAGGTCATATGGGATGGCCACACTGGAAGCATTGGGCGTACTGCAAATCAAGCTATGTCACAGAATGTGGTTGGAGAGGATCAGAATGATGCTACTAACAACGATGCAAGGAATCTTCCCGGTCCTGCAGCTCTACCACCCAAACCTGGAGTTCCATCAGTTCGTCCTCTCCCGCCTCCACCTGGATTAGCCTTGAATCTTCCTTCCCTACCTCCAAATGCACACTATTCTACCCAAATTAGTGGTGGGCTTCCTGTACCCCCGCCACCACAGCCGCCTGTTATTTCAATGATTCCACCTGTTCAGCCACCACATCTTGCAATTCCTGGACATCATTCATTTTTCATGAATCGGCCTCCTTCTATTCCTCCGCCAATGTCTATGAATGCACCAAATATGAATGTCCCACCGCCACCCGGATCTCAGTTTACTCCATTGCCAGTTCCACGACCTTTTGTTCCTCTCCCTGCTCCTCCACCTATGAATACTATGATGATGCCTCCACCTATGCCGCAAGGAGTTCCTCCACCACCTATGCCCCAAGGATCGCTGCCTCCGTTACCACCCGATGAAGCTCCTCCACCCCTTCCAGAGGAACCAGAGCCAAAGAGACAAAAGCTTGATGATTCTTTGCTTGTGCCTGAAGACCAGTTTTTGGCTCAACATCCAGGACCTGTTCGCATCACTGTATCTGTTCCTAATTTTGATGATGGAAACCTCAAAGGCCAAGTTCTGGAGATCACAGTTCAAACCTTAACCGAAACCGTTGGAAGTTTAAAAGAGAAGATTGCCGGCGAGATCCAACTTCCAGCAAACAAACAGAAATTGAGTGGAAAACCTGGGTTTCTCAAGGACAATCTGTCGCTTGCATATTACAATGTTGGAGCAGGGGAACCACTTTCCCTCTCTTTAAGGGAACGTGGTGGTAGAAAGAGATGAACAGATATCCTTGTAGCCGCAACAGAGTAGTAGAGGTTTTAACTATATAGACTTTCCTAGCATATTTAGACTGTTGTATGTTTCAATTTTCAAATCTAAGTGTATTAATTTTCAACTCCCCCTCCCCATCTCAATGAGACTACAAAATTGCTCCCTGACTGTTTTTATGATTTATGATATATATATGTCCGAATTTTGAGGGTTTGATTGTGTCAACATAACTACAAACCTCAAAGGGATGCACAATGGATGTGCTTGAGATTCAACCGAGAAACATGGAACTCGGTCTGGCCCGGCCCACCCTGGATACAAAGCCTATTTGCTATCTCAAATCTCTGGCCCGCCCAGTTCAACCTTCAACTGCCTTCATCTTTCCCACTGTATGTCATCTACTTAATCTTATTTTCTTCCGATTGTGCTTTCTCTTTCTTTTTTAGTACAATTTGGGGGAAGGGGATACCAATTTTAGGGATTGAACCCATGACTGTGGAGTGAAAATGGATTAACACGAAATCAGATAACCAATTGCACCACTGACCCATTTGATGTGGTTTCTCTTTCTTAGTAACAACATTTGAGACGCTGAATGTTACACGTAATGAAATGTTCATGTTGTAATGTATATTACATACAATCTTGAGAGACAGGATCTAGATGTATGTGGTGCATGTGAGAATAGCAAATTGCAAGGAGGCAAGAAGGACAGGATAAGGTAGTTAACTGTCAGTAAACACCTACACTTCTGGTTGTTTCAAGTACAGGCACAAGCAAGAATTTAGGAAGAAACAAA

Coding sequence (CDS)

ATGCTTGGCTCGTTTGGACCAATCTTGACTCTTCCAGCCCCTTCGGAGGATTCCAAACCTGTTGTTCATGATGAAATTATTATTAACAATGAGGTGGATAAAGACAATTCGAACTCTACACCTGTATCAATTGCAACTCATACTAAAACCATTGGTATCATACATCCTCCTCCAGACATCAGAAGCATTGTTGATAAAACTGGACAATTTGTTGCAAAAAATGGACCGGAATTTGAGAAAAGGATCATTGCAAATAATGCCGGTAATGTCAAGTTTAATTTCTTGAATTCCTCAGATCCCTACCATGCTTACTATCAACATAGGTTGTCCGAGTTTCGTGCCCAGAATCAGTCGTCTGCACAACAACCTTCAGAAGCTGCAGATTCTGCTGCATCTGTATCAGGCTCATCTGGTCCAGCTGCTGATAGCAATGAAACAATGGTAGCAAAGCCTGACGTTTCTGCTTTGTTCAAACCTGTACGCAAAATTCTTGAGCCTCCAGAGGCTGAGCAGTATACTGTTCGTCTTCCTGAAGGAATTACAGGGGAAGAATTGGATATTATCAAGCTCACAGCCCAATTTGTTGCCCGAAATGGGAAATCATTCTTGACAGGATTGACAAGTAGAGAGATTAATAATCCCCAGTTTCATTTTCTTAAACCAACTCATAGTATGTTCATGTTTTTTACCTCGCTTGCGGATGCATATTCAAAAGTGTTGATGCCTCCCAAGGGGTTGACTGAGAAATTGAAGAAGAGTGTTACTGACATGACAACAGTACTTGAGAGATGCGTGCATAGACTTGAGTGGGAACGTTCACAAGACCAAGCAAGGCAAAAAGCTGAAGACGAGATTGAGCAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTCGTGGTTGAGGCAATAGACTTTGCAGATGACGAGGATGAAGAGTTACCTCCACCAATGACTCTTGAGGAGGTCATTAGAAAGAGCAAGATTTCAGTTGCCGAGGAAGAGATTGTTGAGCCTGGGAAGGAGATGGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGTATGCGGGCGACTAAGTTAGGAGAAAATGACAATGACAAGAATGATATGAAGGTAGATGAGCAGCCGGAGCCACCAATGAGAATTGTAAAGAACTGGAAGAGGCCTGAAGAGAGGATTTCTACAGAAAAAGAGCATACAAAATTTGTTGTCTCTCCCATCACCGGTGAACTAATTCCGATCAATGAGATGTCTGAACACATGAGGATTTCACTTATTGATCCAAAATACAAAGAGCAAAAGGAAAGAATGTTTGCCAAGATACGGGAGACTACTCTTGCTCAAGATGACGAGATCTCACGAAATATCGTTGGACTGGCCCGACTTCGTCCTGATATATTTGGTACCACTGAGGAGGAAGTATCAAACGCAGTCAAGGCAGAAATTGAAAAGAAAGACGATCAGCCAAAACAGGTCATATGGGATGGCCACACTGGAAGCATTGGGCGTACTGCAAATCAAGCTATGTCACAGAATGTGGTTGGAGAGGATCAGAATGATGCTACTAACAACGATGCAAGGAATCTTCCCGGTCCTGCAGCTCTACCACCCAAACCTGGAGTTCCATCAGTTCGTCCTCTCCCGCCTCCACCTGGATTAGCCTTGAATCTTCCTTCCCTACCTCCAAATGCACACTATTCTACCCAAATTAGTGGTGGGCTTCCTGTACCCCCGCCACCACAGCCGCCTGTTATTTCAATGATTCCACCTGTTCAGCCACCACATCTTGCAATTCCTGGACATCATTCATTTTTCATGAATCGGCCTCCTTCTATTCCTCCGCCAATGTCTATGAATGCACCAAATATGAATGTCCCACCGCCACCCGGATCTCAGTTTACTCCATTGCCAGTTCCACGACCTTTTGTTCCTCTCCCTGCTCCTCCACCTATGAATACTATGATGATGCCTCCACCTATGCCGCAAGGAGTTCCTCCACCACCTATGCCCCAAGGATCGCTGCCTCCGTTACCACCCGATGAAGCTCCTCCACCCCTTCCAGAGGAACCAGAGCCAAAGAGACAAAAGCTTGATGATTCTTTGCTTGTGCCTGAAGACCAGTTTTTGGCTCAACATCCAGGACCTGTTCGCATCACTGTATCTGTTCCTAATTTTGATGATGGAAACCTCAAAGGCCAAGTTCTGGAGATCACAGTTCAAACCTTAACCGAAACCGTTGGAAGTTTAAAAGAGAAGATTGCCGGCGAGATCCAACTTCCAGCAAACAAACAGAAATTGAGTGGAAAACCTGGGTTTCTCAAGGACAATCTGTCGCTTGCATATTACAATGTTGGAGCAGGGGAACCACTTTCCCTCTCTTTAAGGGAACGTGGTGGTAGAAAGAGATGA

Protein sequence

MLGSFGPILTLPAPSEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLVEEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTEEEVSNAVKAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLPGPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR
Homology
BLAST of Sed0006467 vs. NCBI nr
Match: XP_038884734.1 (probable splicing factor 3A subunit 1 [Benincasa hispida])

HSP 1 Score: 1424.1 bits (3685), Expect = 0.0e+00
Identity = 750/813 (92.25%), Postives = 778/813 (95.69%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+AADSAA  S  SGPAAD+NETM AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSAAPASAPSGPAADNNETMSAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTL+EVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLDEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMKVDE+ EPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEESEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQNDATN+DARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDATNSDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP +AHYST ISGGLP+ PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMSAHYSTSISGGLPI-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNV-PPPPGSQFTPLPVPRPFVPLPAPP 660
           VQPP  AIPG   FFMNRPPS+PPPMSMNAPNM+V PPPPGSQFT + VPRPFVPLPAPP
Sbjct: 601 VQPPPPAIPGQQPFFMNRPPSMPPPMSMNAPNMSVPPPPPGSQFTHMQVPRPFVPLPAPP 660

Query: 661 PMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFL 720
           PMNTM+ PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFL
Sbjct: 661 PMNTMIQPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFL 720

Query: 721 AQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGK 780
           AQHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGK
Sbjct: 721 AQHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGK 780

Query: 781 PGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           PGFLKDN+SLAYYNVGAGE LS+SLRERGGRKR
Sbjct: 781 PGFLKDNMSLAYYNVGAGEALSISLRERGGRKR 812

BLAST of Sed0006467 vs. NCBI nr
Match: XP_008441262.1 (PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 putative splicing factor 3A subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+  DS A VS  SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+  EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG  SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

BLAST of Sed0006467 vs. NCBI nr
Match: XP_022137825.1 (probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_022137826.1 probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia])

HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 740/812 (91.13%), Postives = 771/812 (94.95%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSK  V    DEII NN+ DKD +NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQP +AADSAA     SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMR  +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV P PQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV-PQPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG   +FMNRPPS+PPPMSMNAPNM VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTMM+PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDDSLL+PE+QFLA
Sbjct: 661 MNTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQVL ITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGEPLSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811

BLAST of Sed0006467 vs. NCBI nr
Match: XP_022931984.1 (probable splicing factor 3A subunit 1 [Cucurbita moschata])

HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 744/812 (91.63%), Postives = 774/812 (95.32%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII ++EVDKD +NSTPVS+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSTPVSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+AADS A  S  SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSTAPASAPSGPAADSNETVAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSV DMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVIDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTLEEV+R+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMK+DE+PEPPMRIVKNWKRPEERI  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KKDDQPKQVIWDGHTGSIGRTANQAMSQN+VGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPS+PPNAHYS  I+ GLPV   PQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPV-HQPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG  S+FMNRPPSIPPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSYFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MN+MM PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQVLEITVQ+L+ETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810

BLAST of Sed0006467 vs. NCBI nr
Match: XP_022158817.1 (probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_022158818.1 probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia])

HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 738/812 (90.89%), Postives = 771/812 (94.95%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           ML SFGPILTLPAPSEDSK  V    DEII NN+ DKD +NS P SIATHTKTIGIIHPP
Sbjct: 1   MLSSFGPILTLPAPSEDSKLTVQDEKDEIIDNNDGDKDKTNSAPASIATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQP +AADSAA  S  SGPAA+SNE + AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPASAPSGPAABSNEALAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMK+D +PEPPMRIVKNWKRPE+R+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDVEPEPPMRIVKNWKRPEDRVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND+ N D RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDSANYDVRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPN HYSTQISGGLPV PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNVHYSTQISGGLPV-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  AIPG H +FMNRPPS+PPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLP PPP
Sbjct: 601 VQPPPPAIPGQHPYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPTPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTMM PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDD+LL+PEDQFLA
Sbjct: 661 MNTMMPPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDALLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQV+EITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVVEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 811

BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match: Q8RXF1 (Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g14650 PE=1 SV=2)

HSP 1 Score: 943.7 bits (2438), Expect = 1.3e-273
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0

Query: 8   ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
           IL L AP  D K        + D+ +   E+  + +NS    P ++ATHT+TIGIIHPPP
Sbjct: 7   ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66

Query: 68  DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
           DIR+IV+KT QFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E+RAQN+ 
Sbjct: 67  DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126

Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
            A Q ++ +D        +G AAD +E    +PD+ A F+   K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186

Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
           GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246

Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
           VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306

Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
           DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S  EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366

Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
            EGMRA  L EN   +N        E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426

Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
           IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486

Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
           EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN  GE+Q D    D  + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546

Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
           GPAAL PP+PGVP VRPLPPPP LALNLP  PP+A Y          P  P+P  + M+ 
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606

Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
           P+   H       PGH    MNRPP +        P M+VPPPPGSQF   + +PRP+  
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666

Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
           L  PP    MM PPPMP G+ PPP         PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726

Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
           EDQFLAQHPGP  I VS PN +D    GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785

Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match: Q8K4Z5 (Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-112
Identity = 316/841 (37.57%), Postives = 460/841 (54.70%), Query Frame = 0

Query: 6   GPILTLPAP---SEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRS 65
           GP+  +P P   + +SK  + +E        +D + S PV        +GII+PPP++R+
Sbjct: 4   GPVQAVPPPPPVATESKQPIEEEA----SSKEDPTPSKPV--------VGIIYPPPEVRN 63

Query: 66  IVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQ 125
           IVDKT  FVA+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   +  AQ+
Sbjct: 64  IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQE 123

Query: 126 PSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITG 185
           PS A          +     + + +  K     + + +     PPE E   +  P  I+ 
Sbjct: 124 PSAAIPKVMQQQQQA-----TQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISA 183

Query: 186 EELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMP 245
            +LD++KLTAQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L+P
Sbjct: 184 FDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIP 243

Query: 246 PKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVV 305
           PKGL  KLKK   +   VL++  +R+EW + Q++ R+K E+E E+ER+  A IDWHDFVV
Sbjct: 244 PKGLFSKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVV 303

Query: 306 VEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEE-- 365
           VE +DF  +E    PPP T EE+  +  I    E+  E  + EME++ DEE+ +  EE  
Sbjct: 304 VETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETP 363

Query: 366 -----GMRATKLGE-NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERIST 425
                  +   + E +D+++   KV   PE PM           IV+    P+  + +  
Sbjct: 364 SQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPP 423

Query: 426 EKEHTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEIS 485
                +++VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A   +I 
Sbjct: 424 APAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIE 483

Query: 486 RNIVGLARLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQN 545
            ++  LA  R DIFG  E  +   + + EI+K ++   +V WDGH+GS+ RT  QA   N
Sbjct: 484 SSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQAN 543

Query: 546 VVGEDQNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYST 605
           +  ++Q +A +     +P         P KP    +   PPPP  A N+PS  P     T
Sbjct: 544 ITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---T 603

Query: 606 QISGGLPVPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVP 665
            +     +PPP +  V+S +P +  P +A     S     P S+  P P  ++AP +NV 
Sbjct: 604 SVPRPPAMPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV- 663

Query: 666 PPPGSQFTPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPP 725
                   P+P   P +  P PPPM   T  +P P    VP P        P+PP   PP
Sbjct: 664 -------VPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPP 723

Query: 726 PLPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQT 785
           P+ +EP  K+ K +DSL+ PE++FL ++ GPV I V VPN  D     L GQ L  T+  
Sbjct: 724 PMEDEPPSKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQGLVFTL-P 783

Query: 786 LTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRK 809
           LT+ V  +K KI     +PA KQKL  +  F+KD+ SLAYYN+ +G  + L+L+ERGGRK
Sbjct: 784 LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIHLALKERGGRK 791

BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match: A2VDN6 (Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-111
Identity = 314/840 (37.38%), Postives = 454/840 (54.05%), Query Frame = 0

Query: 6   GPILTLPAPSEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVD 65
           GP+  +P P     P   +      E      +STP         +GII+PPP++R+IVD
Sbjct: 4   GPVQAVPPP----PPAATEPKQPTEEEASSKEDSTP-----SKPVVGIIYPPPEVRNIVD 63

Query: 66  KTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSE 125
           KT  FVA+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   +  AQ+PS 
Sbjct: 64  KTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQEPSA 123

Query: 126 AADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITGEEL 185
           A          +     S + +  K     + + +     PPE E   +  P  I+  +L
Sbjct: 124 AIPKVMQQQQQA-----SQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAFDL 183

Query: 186 DIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKG 245
           D++KLTAQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L+PPKG
Sbjct: 184 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKG 243

Query: 246 LTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEA 305
           L  KLKK   +   VL++  +R+EW + Q++ R+K E+E E+ER+  A IDWHDFVVVE 
Sbjct: 244 LFTKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVET 303

Query: 306 IDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEEGMRAT 365
           +DF  +E    PPP T EE+  +  I    E+  E  + EME++ DEE+ +  +     +
Sbjct: 304 VDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPS 363

Query: 366 KLGE----------NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERISTE 425
           +L +          +D+++   KV   PE PM           IV+    P+  + +   
Sbjct: 364 QLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPA 423

Query: 426 KEHTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEISR 485
               +++VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A   +I  
Sbjct: 424 PAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIES 483

Query: 486 NIVGLARLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNV 545
           ++  LA  R DIFG  E  +   + + EI+K ++   +V WDGH+GS+ RT  QA   N+
Sbjct: 484 SLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQANI 543

Query: 546 VGEDQNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQ 605
             ++Q +A +     +P         P KP    +   PPPP  A N+PS  P     T 
Sbjct: 544 TLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---TS 603

Query: 606 ISGGLPVPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVPP 665
           +     +PPP +  V+S +P +  P +A     S     P S+  P P  ++AP +NV  
Sbjct: 604 VPRPPAMPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV-- 663

Query: 666 PPGSQFTPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPP 725
                  P+P   P +  P PPPM   T  +P P    VP P        P+PP   PPP
Sbjct: 664 ------VPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPPP 723

Query: 726 LPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQTL 785
           + +EP  K+ K +DSL+ PE++FL ++ GPV I V VPN  D     L GQVL  T+  L
Sbjct: 724 MEDEPASKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL-PL 783

Query: 786 TETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           T+ V  +K KI     +PA KQKL  +  F+KD+ SLAYYN+  G  + L+L+ERGGRK+
Sbjct: 784 TDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793

BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match: Q15459 (Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.8e-111
Identity = 312/834 (37.41%), Postives = 455/834 (54.56%), Query Frame = 0

Query: 12  PAPSEDSKPVVHDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFV 71
           P P+E  +P   +         +D++ S PV        +GII+PPP++R+IVDKT  FV
Sbjct: 14  PVPTEPKQPTEEEA-----SSKEDSAPSKPV--------VGIIYPPPEVRNIVDKTASFV 73

Query: 72  AKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAA 131
           A+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   +  AQ+PS A     
Sbjct: 74  ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQEPSAAIPKVM 133

Query: 132 SVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLT 191
                +     + + +  K     + + +     PPE E   +  P  I+  +LD++KLT
Sbjct: 134 QQQQQT-----TQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAFDLDVVKLT 193

Query: 192 AQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLK 251
           AQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L+PPKGL  KLK
Sbjct: 194 AQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLK 253

Query: 252 KSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADD 311
           K   +   VL++  +R+EW + Q++ R+K E+E E+ER+  A IDWHDFVVVE +DF  +
Sbjct: 254 KEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPN 313

Query: 312 EDEELPPPMTLEEVIRKSKISVAEEEIVEPGK-EMEMDMDEEEMQLVEEGMRATKLGE-- 371
           E    PPP T EE+  +  I    E+  E  + EME++ DEE+ +  +     ++L +  
Sbjct: 314 EQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKAEEPPSQLDQDT 373

Query: 372 --------NDNDKNDMKVDEQPEPPMR----------IVKNWKRPE--ERISTEKEHTKF 431
                   +D+++   KV   PE PM           IV+    P+  + +       ++
Sbjct: 374 QVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEY 433

Query: 432 VVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEISRNIVGLA 491
           +VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A   +I  ++  LA
Sbjct: 434 LVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLA 493

Query: 492 RLRPDIFGTTEEEVSNAV-KAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQN 551
             R DIFG  E  +   + + EI+K ++   +V WDGH+GS+ RT  QA   N+  ++Q 
Sbjct: 494 ERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQANITLQEQI 553

Query: 552 DATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLP 611
           +A +     +P         P KP    +   PPPP  A N+PS  P     T +     
Sbjct: 554 EAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPSSAPPI---TSVPRPPT 613

Query: 612 VPPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSI--PPPMSMNAPNMNVPPPPGSQF 671
           +PPP +  V+S +P +  P +A     S     P S+  P P  ++AP +NV        
Sbjct: 614 MPPPVRTTVVSAVPVMPRPPMA-----SVVRLPPGSVIAPMPPIIHAPRINV-------- 673

Query: 672 TPLPVPRPFVPLPAPPPM--NTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPE 731
            P+P   P +  P PPPM   T  +P P    VP P        P+PP   PPP+ +EP 
Sbjct: 674 VPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVPAP-------APMPPVHPPPPMEDEPT 733

Query: 732 PKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDD---GNLKGQVLEITVQTLTETVGS 791
            K+ K +DSL+ PE++FL ++ GPV I V VPN  D     L GQVL  T+  LT+ V  
Sbjct: 734 SKKLKTEDSLM-PEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL-PLTDQVSV 793

Query: 792 LKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           +K KI     +PA KQKL  +  F+KD+ SLAYYN+  G  + L+L+ERGGRK+
Sbjct: 794 IKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793

BLAST of Sed0006467 vs. ExPASy Swiss-Prot
Match: Q86A14 (Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf3a1 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.8e-68
Identity = 241/831 (29.00%), Postives = 395/831 (47.53%), Query Frame = 0

Query: 59  DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 118
           ++++I+DKT  + AK G  FE ++      N KFNF+   D Y+ YY++++ E +A+ Q+
Sbjct: 12  ELKTIIDKTAAYAAKLGESFENKVKQREGHNAKFNFMKEGDQYYPYYRNKIVENKAKIQA 71

Query: 119 SAQQPSEAADS-------------------AASVSGSSGPAADSNETMVAKPDVSA---- 178
            A   + AA+                      + + ++ P   ++ T+V  P  ++    
Sbjct: 72  DAAAAAAAANPKTPSTTTTTTTTTTATTPLPTATATTTSPTPTTSSTIVPVPQTNSTQQL 131

Query: 179 ------------LFK--------PVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFV 238
                       +F+        P +K    P+   Y + +P+ +T  ELD I+LTAQF+
Sbjct: 132 QQQQQQQQQTTPVFEKPQPPPPPPPKKEPTQPDPLLYILDVPDFMTPLELDTIRLTAQFI 191

Query: 239 ARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKS-V 298
           A+NG SF   L SRE+ N QF FLKPT+ ++ +F +L ++Y++++ PP+G+ E+LK +  
Sbjct: 192 AKNGDSFFMELASREVKNSQFDFLKPTNHLYEWFRALVESYAQIIYPPQGIKEQLKSNYF 251

Query: 299 TDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDE 358
           ++  T+LER ++R E+ + ++   QK E+  ++E+  +A IDWHDFV+V+ I+F +D+ +
Sbjct: 252 SNKQTILERAMNRCEYNQLKEIEEQKKEEREDEEKTIIASIDWHDFVIVDTIEFNEDDLD 311

Query: 359 ELPPPMTLEEVIRKSKISVAEE-------------EIVEPGKEMEMDMDEEEMQLVEEGM 418
           +LP P T +++I         +             + +E   +MEM+MD+E+    E+ +
Sbjct: 312 DLPQPRTFDQLIAGDTPFGGSDFDNDGHGSNGKGGQDMEMEMDMEMEMDDEDNNNNEDEI 371

Query: 419 RATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGELIPIN 478
             + L   +   N   +  + +  ++IVK++++    + +        +     + IP++
Sbjct: 372 EESSLSSTNTTGN---LPPKDQSKLKIVKDYQKSNSSVKSNAPTKLTQLCQFCKQEIPLD 431

Query: 479 EMSEHMRISLIDPKYKEQKERMFAKIRE-----TTLAQDDEISRNIVGLARLRPDIFGTT 538
           EM EHMRI LI  + ++ +               TL QDD+I+RN+   A  R DIFG T
Sbjct: 432 EMQEHMRIELIQKQQRDSRLGGGGSSNNNNNLTNTLTQDDDIARNLQSFASKRVDIFGET 491

Query: 539 EEEVSNAVKAEIEKKDDQPKQ---VIWDGHTGSIGR----------TANQAMSQNVVGED 598
           E           +K+D+QP Q   VIWDGH+GSI R           A QA  Q      
Sbjct: 492 ESS---------KKQDEQPTQAPKVIWDGHSGSIPRVQAAQQAAQLAAQQAAQQKAAAIA 551

Query: 599 QNDATNNDARNLPGPAALPPKP-GVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV 658
              A+   A         PP+P G+        PPG+      +PP             +
Sbjct: 552 AQQASQQQASQQQQQQLQPPQPIGIHHHPQRHLPPGM------MPPGM-----------M 611

Query: 659 PPPPQPPVISMIPPVQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPL 718
           PP   PP   M+PP   P                  PPP  M  P M  PPPPG      
Sbjct: 612 PPGMMPP--GMMPPGMVP------------------PPPFGMIPPGMVPPPPPG------ 671

Query: 719 PVPRPFVPLPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPP---LPPDEAPPPLPEEPEPK 778
                             +M P  P G+  PP  Q  LPP     P  +     EEP+ K
Sbjct: 672 ------------------LMIPTAPPGLMIPPTQQQQLPPQTNTSPSSSSSIKVEEPQSK 731

Query: 779 RQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKI 809
           + K+DD +L+PE  +L  +P PV +TV + +      K  + +IT+Q  T+++  LKEKI
Sbjct: 732 KLKIDD-VLIPESVWLQNNPNPVNLTVEMAD------KSNIYQITLQP-TDSISLLKEKI 760

BLAST of Sed0006467 vs. ExPASy TrEMBL
Match: A0A5D3C426 (Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001770 PE=4 SV=1)

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+  DS A VS  SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+  EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG  SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

BLAST of Sed0006467 vs. ExPASy TrEMBL
Match: A0A1S3B308 (probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE=4 SV=1)

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 748/812 (92.12%), Postives = 775/812 (95.44%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII NNEVDKDN+NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+  DS A VS  SGPA+D+NET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+  EDQNDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYST ISGGLP+ PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPI-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG  SFFMNRPPSIPPPMSMNAPNM+VPPPPGSQFT + VPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTM+ PPPMPQGVPPPPMPQGS+PPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGPVRITVSVPN DDGNLKGQVLEITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

BLAST of Sed0006467 vs. ExPASy TrEMBL
Match: A0A6J1C7R8 (probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009168 PE=4 SV=1)

HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 740/812 (91.13%), Postives = 771/812 (94.95%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSK  V    DEII NN+ DKD +NS P S+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQP +AADSAA     SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMR  +LGENDNDKNDMKVDE+PEPPMRIVKNWKRPEER+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV P PQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPV-PQPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG   +FMNRPPS+PPPMSMNAPNM VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTMM+PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDDSLL+PE+QFLA
Sbjct: 661 MNTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQVL ITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGEPLSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811

BLAST of Sed0006467 vs. ExPASy TrEMBL
Match: A0A6J1DX59 (probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025286 PE=4 SV=1)

HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 739/812 (91.01%), Postives = 771/812 (94.95%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVVH---DEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           ML SFGPILTLPAPSEDSK  V    DEII NN+ DKD +NS P SIATHTKTIGIIHPP
Sbjct: 1   MLSSFGPILTLPAPSEDSKLTVQDEKDEIIDNNDGDKDKTNSAPASIATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQP +AADSAA  S  SGPAADSNE + AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPASAPSGPAADSNEALAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDE+LPPPMTLEEVIR+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMK+D +PEPPMRIVKNWKRPE+R+  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDVEPEPPMRIVKNWKRPEDRVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQN+VGEDQND+ N D RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDSANYDVRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPN HYSTQISGGLPV PPPQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNVHYSTQISGGLPV-PPPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  AIPG H +FMNRPPS+PPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLP PPP
Sbjct: 601 VQPPPPAIPGQHPYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPTPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MNTMM PPPMPQG+PPPPMPQGSLPPLPP+EAPPPLP+EPEPKRQKLDD+LL+PEDQFLA
Sbjct: 661 MNTMMPPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDALLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQV+EITVQ+LTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVVEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 811

BLAST of Sed0006467 vs. ExPASy TrEMBL
Match: A0A6J1EVS5 (probable splicing factor 3A subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111438316 PE=4 SV=1)

HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 744/812 (91.63%), Postives = 774/812 (95.32%), Query Frame = 0

Query: 1   MLGSFGPILTLPAPSEDSKPVV---HDEIIINNEVDKDNSNSTPVSIATHTKTIGIIHPP 60
           MLGSFGPILTLPAPSEDSKP V    DEII ++EVDKD +NSTPVS+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSTPVSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLP 180
           SSAQQPS+AADS A  S  SGPAADSNET+ AKPDVSALFKPVRK+LEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSTAPASAPSGPAADSNETVAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSV DMTTVLERCVHRLEWERSQ+QARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVIDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDE+LPPPMTLEEV+R+SKISVAEEEIVEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 420
           EEGMRA +LGENDNDKNDMK+DE+PEPPMRIVKNWKRPEERI  E++HTKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKIDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 540
           EEVSNAVKAEIE KKDDQPKQVIWDGHTGSIGRTANQAMSQN+VGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPP 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPS+PPNAHYS  I+ GLPV   PQPPVISMIP 
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPV-HQPQPPVISMIPS 600

Query: 601 VQPPHLAIPGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPAPPP 660
           VQPP  A+PG  S+FMNRPPSIPPPMSMNAPNM+VPPPPGSQFTP+PVPRPFVPLPAPPP
Sbjct: 601 VQPPPPAMPGQQSYFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPP 660

Query: 661 MNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQFLA 720
           MN+MM PPPMPQGVPPPPMPQGSLPPLPPDEAPPPLP+EPEPKRQKLDDSLL+PEDQFLA
Sbjct: 661 MNSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QHPGP+RITVSVPN DDGNLKGQVLEITVQ+L+ETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPIRITVSVPNLDDGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           GFLKDN+SLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810

BLAST of Sed0006467 vs. TAIR 10
Match: AT1G14650.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )

HSP 1 Score: 943.7 bits (2438), Expect = 9.5e-275
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0

Query: 8   ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
           IL L AP  D K        + D+ +   E+  + +NS    P ++ATHT+TIGIIHPPP
Sbjct: 7   ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66

Query: 68  DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
           DIR+IV+KT QFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E+RAQN+ 
Sbjct: 67  DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126

Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
            A Q ++ +D        +G AAD +E    +PD+ A F+   K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186

Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
           GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246

Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
           VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306

Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
           DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S  EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366

Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
            EGMRA  L EN   +N        E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426

Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
           IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486

Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
           EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN  GE+Q D    D  + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546

Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
           GPAAL PP+PGVP VRPLPPPP LALNLP  PP+A Y          P  P+P  + M+ 
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606

Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
           P+   H       PGH    MNRPP +        P M+VPPPPGSQF   + +PRP+  
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666

Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
           L  PP    MM PPPMP G+ PPP         PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726

Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
           EDQFLAQHPGP  I VS PN +D    GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785

Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

BLAST of Sed0006467 vs. TAIR 10
Match: AT1G14650.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )

HSP 1 Score: 943.7 bits (2438), Expect = 9.5e-275
Identity = 545/818 (66.63%), Postives = 627/818 (76.65%), Query Frame = 0

Query: 8   ILTLPAPSEDSK------PVVHDEIIINNEVDKDNSNST---PVSIATHTKTIGIIHPPP 67
           IL L AP  D K        + D+ +   E+  + +NS    P ++ATHT+TIGIIHPPP
Sbjct: 7   ILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTIGIIHPPP 66

Query: 68  DIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 127
           DIR+IV+KT QFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E+RAQN+ 
Sbjct: 67  DIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKD 126

Query: 128 SAQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPE 187
            A Q ++ +D        +G AAD +E    +PD+ A F+   K LE PE E+YTVRLPE
Sbjct: 127 GA-QGTDDSDGTTDPQLDTG-AADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYTVRLPE 186

Query: 188 GITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSK 247
           GITGEELDIIKLTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL DAYS+
Sbjct: 187 GITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSE 246

Query: 248 VLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWH 307
           VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQ+Q ++K EDE E ER+QMAMIDWH
Sbjct: 247 VLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWH 306

Query: 308 DFVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLV 367
           DFVVVE+IDFAD+EDEELPPPMTL+EVIR+SK S  EE EIVEPGKE+EM+MDEEE++LV
Sbjct: 307 DFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEEEVKLV 366

Query: 368 EEGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGEL 427
            EGMRA  L EN   +N        E PMRIVKNWKRPE+RI TE++ TK V+SPITGEL
Sbjct: 367 AEGMRAANLEENVKIEN----VHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGEL 426

Query: 428 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 487
           IPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTE
Sbjct: 427 IPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTE 486

Query: 488 EEVSNAVKAEIE-KKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLP 547
           EEVSNAVKAEIE KKD+QPKQVIWDGHTGSIGRTANQA+SQN  GE+Q D    D  + P
Sbjct: 487 EEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGDPNSFP 546

Query: 548 GPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIP 607
           GPAAL PP+PGVP VRPLPPPP LALNLP  PP+A Y          P  P+P  + M+ 
Sbjct: 547 GPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQY----------PGAPRPLGVPMMQ 606

Query: 608 PVQPPHLAI----PGHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFT-PLPVPRPFVP 667
           P+   H       PGH    MNRPP +        P M+VPPPPGSQF   + +PRP+  
Sbjct: 607 PMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPRPYGQ 666

Query: 668 LPAPPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVP 727
           L  PP    MM PPPMP G+ PPP         PP+EAPPPLPEEPE KRQK D+S LVP
Sbjct: 667 L--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDESALVP 726

Query: 728 EDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQ 787
           EDQFLAQHPGP  I VS PN +D    GQ +EITVQ+L+E VGSLKEKIAGEIQ+PANKQ
Sbjct: 727 EDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQ 785

Query: 788 KLSGKPGFLKDNLSLAYYNVGAGEPLSLSLRERGGRKR 809
           KLSGK GFLKDN+SLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 787 KLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

BLAST of Sed0006467 vs. TAIR 10
Match: AT1G14640.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 789.3 bits (2037), Expect = 3.0e-228
Identity = 469/778 (60.28%), Postives = 561/778 (72.11%), Query Frame = 0

Query: 8   ILTLPAPSEDSK------PVVHDEIIINNEV--DKDNSNSTPVSIATHTKTIGIIHPPPD 67
           IL L AP  D          + DE I  NE   +++NS  TP+++ATHT  IGII+PPP+
Sbjct: 7   ILPLEAPPADGNLGPLPPSQLTDEEIKENEFQGEQNNSIQTPIAVATHTNPIGIIYPPPE 66

Query: 68  IRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSS 127
           IR IV+ T QFV++NG  F  ++    A N  F+FL S +PYH +Y+++++E+    +  
Sbjct: 67  IRKIVETTAQFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEYSCHIRDG 126

Query: 128 AQQPSEAADSAASVSGSSGPAADSNETMVAKPDVSALFKPVRKILEPPEAEQYTVRLPEG 187
           AQ           V  +  P  D      AKPD+ A F+  RKILE PE E+YTVRLPEG
Sbjct: 127 AQ--------GTDVDDTEDPKLDDESD--AKPDLQAQFRAPRKILEAPEPEKYTVRLPEG 186

Query: 188 ITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKV 247
           I   ELDIIK TAQFVARNG+SFL  L  RE+NN QF F+KPTHSMF FFTSL DAYS+V
Sbjct: 187 IMEAELDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVDAYSEV 246

Query: 248 LMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQDQARQKAEDEIEQERIQMAMIDWHD 307
           LMPP+ L EKL+KSV D+TTVLERC++RLEW+R Q++ + K EDE E+ER+QM MIDW D
Sbjct: 247 LMPPRDLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVMIDWKD 306

Query: 308 FVVVEAIDFADDEDEELPPPMTLEEVIRKSKISVAEE-EIVEPGKEMEMDMDEEEMQLVE 367
           F VVE+IDFAD+ED++LP PMTLEEVIR+SK+S  EE EIVEPGKE+EMDMDEEE++LV 
Sbjct: 307 FAVVESIDFADEEDKDLPMPMTLEEVIRRSKVSAMEEDEIVEPGKEVEMDMDEEEVKLVA 366

Query: 368 EGMRATKLGENDNDKNDMKVDEQPEPPMRIVKNWKRPEERISTEKEHTKFVVSPITGELI 427
           EGMRA  L E         V+ + E PMRIVKNWKRPE+R  TE++ +K V+S ITGELI
Sbjct: 367 EGMRAANLEEYVG-----SVEIEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRITGELI 426

Query: 428 PINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTEE 487
           PI EMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLARLRPDIFGTTEE
Sbjct: 427 PITEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEE 486

Query: 488 EVSNAVKAEIEKKDDQPKQVIWDGHTGSIGRTANQAMSQNVVGEDQNDATNNDARNLPGP 547
           EVSNAVKA+IEKKD+QPKQVIWDGHTGSIGRTANQA++QN  GE Q D    D  + PGP
Sbjct: 487 EVSNAVKADIEKKDEQPKQVIWDGHTGSIGRTANQALTQNSNGE-QGDGVYGDPNSFPGP 546

Query: 548 AAL-PPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPPPPQPPVISMIPPV 607
           AA  PP+PGVP+VRPLPPP  LALNLP  PP+  Y          P  P+P  + M+ P+
Sbjct: 547 AAFPPPRPGVPTVRPLPPPQNLALNLPRPPPSVQY----------PGAPRPLGVPMMQPM 606

Query: 608 QPPH---LAIP-GHHSFFMNRPPSIPPPMSMNAPNMNVPPPPGSQFTPLPVPRPFVPLPA 667
              H   ++ P GH S  M+RPP + P        M VPPPPGSQF+ + VP+P+  L  
Sbjct: 607 YQQHQLSMSGPHGHPSMMMSRPPQMQPV-------MRVPPPPGSQFSHMQVPQPYGQL-- 666

Query: 668 PPPMNTMMMPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPEEPEPKRQKLDDSLLVPEDQ 727
           PP    MM PPPM + +PPPP         PP EAPPPLPEEPEPKRQKLD+S LVPEDQ
Sbjct: 667 PPLSMGMMQPPPMAE-MPPPP---------PPGEAPPPLPEEPEPKRQKLDESALVPEDQ 726

Query: 728 FLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLTETVGSLKEKIAGEIQLPANKQK 772
           FLAQHPGP  I VS PN +D    GQV+EITVQ+L+E VGSLKEKIAGE+Q+PANKQK
Sbjct: 727 FLAQHPGPATIRVSKPNEND----GQVMEITVQSLSENVGSLKEKIAGEMQIPANKQK 735

BLAST of Sed0006467 vs. TAIR 10
Match: AT5G12280.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 126.7 bits (317), Expect = 8.4e-29
Identity = 72/110 (65.45%), Postives = 84/110 (76.36%), Query Frame = 0

Query: 690 PPLPEEPEPKRQKLDDSLLVPEDQFLAQHPGPVRITVSVPNFDDGNLKGQVLEITVQTLT 749
           PPL  E E    + D+S+LVPEDQFLAQHPG   I VSVP+ DD     +V++ITVQ+L+
Sbjct: 314 PPLGGESE--EPEFDESVLVPEDQFLAQHPGSSTIMVSVPDPDD----WKVVKITVQSLS 373

Query: 750 ETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAYYNVGAGEPLSLS 800
           E V SLKEKI+GEIQ P NKQKL GK GFLKDN SLA+YNVGAGE L+LS
Sbjct: 374 ENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEILTLS 417


HSP 2 Score: 63.9 bits (154), Expect = 6.7e-10
Identity = 81/300 (27.00%), Postives = 122/300 (40.67%), Query Frame = 0

Query: 32  VDKDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVK 91
           ++KDNSN  P              PP ++R  +DK  + VA+ G   E++I+        
Sbjct: 77  LEKDNSNEAPA------------EPPREMRIHMDKIARVVARKGLRIERKIM-------- 136

Query: 92  FNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAASVSGSSGPAADSNETMVAKP 151
                            +SE+ A+NQ    Q  EA            PA         K 
Sbjct: 137 ----------------NVSEYLAKNQDEGAQEPEA------------PA-------TLKG 196

Query: 152 DVSALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREI 211
           D     +P   +L  P  +     LPEG T E++D I LTAQ V R G+ F   L     
Sbjct: 197 DAQHYRRPF--LLSDPAPKFPDYVLPEGYTIEDVDTIFLTAQIVGRYGEEFWLDLIKEVD 256

Query: 212 NNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWE 271
           N PQF FLKP  S F +F  L+      ++  +GL    K + + M  V +   + L   
Sbjct: 257 NKPQFEFLKPADSKFDYFNRLS------VVASEGLKRSEKLTSSRMAIVSKAFFYHL--- 308

Query: 272 RSQDQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDEELP---PPMTLEEVIRK 329
           R Q++ R+    E   +   +     + FV  +   FAD +DE+LP    P  ++ ++ K
Sbjct: 317 RRQNEKRELTHKEGAAKACTL-FGALYAFVGPDGC-FADIKDEDLPLLQHPSAIKNILTK 308

BLAST of Sed0006467 vs. TAIR 10
Match: AT5G06520.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 118.2 bits (295), Expect = 3.0e-26
Identity = 103/298 (34.56%), Postives = 146/298 (48.99%), Query Frame = 0

Query: 34  KDNSNSTPVSIATHTKTIGIIHPPPDIRSIVDKTGQFVAKNGPEFEKRIIANNAGNVKFN 93
           + NSN  P S+A        I PPP+IRS V+ T   V+KNG E E++++  +  + +  
Sbjct: 382 QSNSNKAPASVAP-------IEPPPEIRSCVENTALIVSKNGLEIERKMMELSMNDARHR 441

Query: 94  FLNSSDPYHAYYQHRLSEFRAQNQSSAQQPSEAADSAASVSGSSGPAADSNETMVAKPDV 153
           F+ S+DPYHA+YQ +L+E+RAQNQ  A       D   +V  S G               
Sbjct: 442 FVWSTDPYHAFYQLKLAEYRAQNQDRAH------DIQPNVLRSFGFG------------- 501

Query: 154 SALFKPVRKILEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINN 213
                      E PE E         IT +EL IIKLTAQF+AR G +F+ GL  R + N
Sbjct: 502 ----------FEFPEKE---------ITLKELGIIKLTAQFMARYGMNFVQGLRKRVVGN 561

Query: 214 PQFHFLKPT-HSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWER 273
           PQF FL+ T +S F F+  L  AYS+VLMP K     L KS     TV++  +  L+ E+
Sbjct: 562 PQFKFLESTNNSRFSFYNGLVIAYSRVLMPSK----MLSKSDDCTATVVDGFLSCLQLEK 617

Query: 274 SQDQARQKAEDEIEQERIQMAMIDWHD-FVVVEAIDFADDEDE------ELPPPMTLE 324
                         +E + + MID  D F  +E  D++ +  +      ++ PP T E
Sbjct: 622 -------------REEGVDIDMIDLLDCFARLEDADYSANVPQPQHLSTQMQPPHTPE 617

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884734.10.0e+0092.25probable splicing factor 3A subunit 1 [Benincasa hispida][more]
XP_008441262.10.0e+0092.12PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 puta... [more]
XP_022137825.10.0e+0091.13probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_02213... [more]
XP_022931984.10.0e+0091.63probable splicing factor 3A subunit 1 [Cucurbita moschata][more]
XP_022158817.10.0e+0090.89probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_02215... [more]
Match NameE-valueIdentityDescription
Q8RXF11.3e-27366.63Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g146... [more]
Q8K4Z54.5e-11237.57Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1[more]
A2VDN63.8e-11137.38Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1[more]
Q154593.8e-11137.41Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1[more]
Q86A146.8e-6829.00Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf... [more]
Match NameE-valueIdentityDescription
A0A5D3C4260.0e+0092.12Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3B3080.0e+0092.12probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE... [more]
A0A6J1C7R80.0e+0091.13probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 ... [more]
A0A6J1DX590.0e+0091.01probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 ... [more]
A0A6J1EVS50.0e+0091.63probable splicing factor 3A subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111438... [more]
Match NameE-valueIdentityDescription
AT1G14650.19.5e-27566.63SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa... [more]
AT1G14650.29.5e-27566.63SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa... [more]
AT1G14640.13.0e-22860.28SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [more]
AT5G12280.18.4e-2965.45SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [more]
AT5G06520.13.0e-2634.56SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 579..600
score: 33.64
coord: 660..685
score: 30.77
coord: 540..556
score: 42.35
coord: 642..659
score: 33.33
NoneNo IPR availableGENE3D3.10.20.90coord: 697..807
e-value: 6.9E-31
score: 108.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 661..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 661..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..143
NoneNo IPR availablePANTHERPTHR15316:SF9SPLICING FACTOR 3A SUBUNIT 1-RELATEDcoord: 25..808
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 724..801
e-value: 4.9E-9
score: 46.0
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 736..803
e-value: 1.6E-7
score: 31.0
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 749..805
score: 13.77215
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 185..238
e-value: 2.2E-20
score: 83.7
coord: 61..114
e-value: 2.0E-22
score: 90.5
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 185..236
e-value: 1.9E-17
score: 63.0
coord: 61..112
e-value: 6.9E-20
score: 70.8
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 63..105
score: 17.693125
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 187..229
score: 17.00379
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 47..120
e-value: 2.5E-26
score: 93.1
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 180..238
e-value: 1.1E-24
score: 88.1
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 38..113
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 164..237
IPR022030Splicing factor 3A subunit 1, conserved domainPFAMPF12230PRP21_like_Pcoord: 254..467
e-value: 5.8E-57
score: 193.0
IPR045146Splicing factor 3A subunit 1PANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 25..808
IPR035563Splicing factor 3A subunit 1, ubiquitin domainCDDcd01800Ubl_SF3a120coord: 721..801
e-value: 1.25293E-28
score: 107.659
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 702..806

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006467.1Sed0006467.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
biological_process GO:0045292 mRNA cis splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0005686 U2 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding