Sed0006457 (gene) Chayote v1

Overview


Name	Sed0006457
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Autophagy-related protein
Location	LG07: 4671697 .. 4673938 (+)
RNA-Seq Expression	Sed0006457
Synteny	Sed0006457

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAACATTGAAAAATAACAAATGTTTGCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTTAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCATTTTGGTTTCATTTCTAATTTTAACATACTATAATAAAAACTTATTTTCTTCTTTTTATTATTCCATTGTTCTTTCAATTCGGACGGCATCGCAAAGTGAGCGCTAATGGGAAAATCCAAATCCTTCAAGAACGAGTTCTCTTACGGTATTTGACTTGAAATTTGTGTTGATTTTCGTTATCTTTCATCAATTTTTCTCTCGTTTGATGATTTTGAAGATCGGTGTTTAATTTATCGCGTTGATTTTTTCGTAGAACAACGATTTGAGGAATCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAAGTTGAAAATTCTCATCTTAACTCTCTTTAATTTGATAAGATTCAGCTCTTGCTCGTTCTGTTTTCGATTTTGTCGAGAAATTATAGAAATTGGTGAATTTGTGAATTATTTTACAATCGGCGACTCAGAAAGTTCGCAGATGTTGAGTTCTTAGGTTATTATCCTTTTTTCATTTTGGTTGAAGCATCGTCGTTAAGAATCTTCTTCGAAATTGCTCGTAGTTATTTATGAAGGATGTTTATCAGATCAATTCTTTCGGAAAATGAAATACTAAGTCAAATTTTCCTTTGCAATTAAGAACAAAATTGTATGTGAATTTTTGCACAACTCGTGGATTGAAGCTGTTTGTTGATTGTATTCAGAGATGAATTCAATTCTGGTAGAGCCTTGGACAGAGTTGTAGAATGAAACATTCAATGTTCTTGTTCCTAAAATACAATACAATGGACAATAATGTGCAGACTTAATTATGTAATCTTCTGATGTTCTTGAGGTGTTAGTGTTTGGTAGATATTCATTTCCTCCAAAATCCTTGAAAGTGAATTAATAGTTTTTTCTTTTGATGTTTTGATTATAATTGCAGGTAATTGTTGAGAGATATGAGAAATGTGAGTTTCCTGAAATGGAAAAGAAGAAGTAAGTTCCCTCCAGCATGTCTGAGCTTTCTCAATGTTTGATTTCATTTATCTCTGTAGATACTATCACTTTAGCATAACACTCTTTAACTTCTTGATTGATAATGTTTGTTTTTGTTTGAATATGGCTACCTATTATATGACCATTCCAGAAATTTGCATGCCATTTATTTATTTACACGTTTACTCAGAAAACATAGTCTTGCAAGCTTGTTTTACAGATATTTGTGTGACTGGTTTCTAAACGTCGAATTGTGTTTAGCCAATAAGAGTCATCATAGCTCAACCGGCATAAGTATGTGCATATATGACCAAGAGGTCATGGGTTGAAATCTTCTCATTGTTAAACTAAAAAAACTTTTGAATTATGTATATGTTATGAAACACATTGTATTCCAAAGTTTTCTTGCCTCTTACTATACAAGGGATTTTCTAATCATGTCTAGCTTTTATATTTGAAAGCTAGTTGTGATCCTGACATAACATGTTACATGGCATATTTTGTCAATACAGTTTTGCTTTCTTTATTGAATGTCTTCTTCTGTTTTGTTATTGATTACAGGTACCTCATTCCTCGAGACATGTCTGTTGGTCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTTGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAAAATACTTTGCCACAAACAGGTAATGTTACATTTCGGCTGATGCCGCTGCATATTTTTACGATTATTCTCGTGCAACAAGTCTTTTTAATGCTAGGTACTAACATGCTAAATATTTAACCTCAAACTTCGCACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGTTTTCTGTACATGTGCTACAGCAGTGAAAAGACCTTTGGCTAAGCTAAATCTGATTGAGATTTGTGGATACTGAAGTTGTATGTTTATGTTAATCTTCCATTTGTGAATATATTCCATTCCATGAACGAATTTGTTTTTACCATGTAATGTGTAAATCATCCTTCATATTCCAAGTTCTGTTAATTTAAGTTTATTTCAAAGGTGCAGAAAGATGAATGTACTAAGTAGCCATGGCTTGGGGCTGGCCAACATAGGGTGTGCCCACTTATTGAGTGGAGCCAAACCTACTTGAACTCAGTTTTAATGAATTGGTTCTATTATTCCAAATAATTTAGGCATTGCTTTTAAA

mRNA sequence

GAAAAACATTGAAAAATAACAAATGTTTGCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTTAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCATTTTGGTTTCATTTCTAATTTTAACATACTATAATAAAAACTTATTTTCTTCTTTTTATTATTCCATTGTTCTTTCAATTCGGACGGCATCGCAAAGTGAGCGCTAATGGGAAAATCCAAATCCTTCAAGAACGAGTTCTCTTACGAACAACGATTTGAGGAATCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAATTGTTGAGAGATATGAGAAATGTGAGTTTCCTGAAATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGTCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTTGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAAAATACTTTGCCACAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGTTTTCTGTACATGTGCTACAGCAGTGAAAAGACCTTTGGCTAAGCTAAATCTGATTGAGATTTGTGGATACTGAAGTTGTATGTTTATGTTAATCTTCCATTTGTGAATATATTCCATTCCATGAACGAATTTGTTTTTACCATGTAATGTGTAAATCATCCTTCATATTCCAAGTTCTGTTAATTTAAGTTTATTTCAAAGGTGCAGAAAGATGAATGTACTAAGTAGCCATGGCTTGGGGCTGGCCAACATAGGGTGTGCCCACTTATTGAGTGGAGCCAAACCTACTTGAACTCAGTTTTAATGAATTGGTTCTATTATTCCAAATAATTTAGGCATTGCTTTTAAA

Coding sequence (CDS)

ATGGGAAAATCCAAATCCTTCAAGAACGAGTTCTCTTACGAACAACGATTTGAGGAATCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAATTGTTGAGAGATATGAGAAATGTGAGTTTCCTGAAATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGTCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTTGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAAAATACTTTGCCACAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGTTTTCTGTACATGTGCTACAGCAGTGAAAAGACCTTTGGCTAA

Protein sequence

MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG

Homology

[Close]

BLAST of Sed0006457 vs. NCBI nr
Match: XP_023004698.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFKNEFSYEQR EESFEIL KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. NCBI nr
Match: XP_038898685.1 (autophagy-related protein 8i-like [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EF+YEQRFEESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFEESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVKNTLPQT SLMSTVY SYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMSTVYNSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. NCBI nr
Match: XP_022954168.1 (autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo] >KAG7014281.1 Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EF+YEQRF ESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. NCBI nr
Match: XP_022145376.1 (autophagy-related protein 8i-like [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 111/118 (94.07%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKSKSFKNEF+YEQRFEE+FEILAKYPDRVPVIVERY+KCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLS RLHLAPGKALFVFVKNTLPQTASLMS+VYESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of Sed0006457 vs. NCBI nr
Match: KAG6575725.1 (Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EF+YEQRF ESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMETVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot
Match: Q9LRP7 (Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-43
Identity = 82/114 (71.93%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   KSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           KSFK +++ ++R  ES EI+AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot
Match: Q8S925 (Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.4e-40
Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   KSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           KSFK++FS ++R +ES  I+AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV NTLPQTAS M ++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot
Match: Q2RBS4 (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D PE=3 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-39
Identity = 77/117 (65.81%), Postives = 96/117 (82.05%), Query Frame = 0


Query: 3   KSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQF 62
           K + FK EF+ E+R +ES  ++A YPDR+PVIVE++ +   PEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63  IHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDD-DGFLYMCYSSEKTFG 119
           I +L +RLHL+PG ALFVFV NTLPQTA LM +VYESYKD+ DGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-33
Identity = 65/113 (57.52%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK+E   E+R  E+  I  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++V
Sbjct: 5   SFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+F+FVKN LP TA++MS +YE +KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.0e-33
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KY DR+PVIVE+ +K + PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+FVFVKNTLP TASLMS +YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0006457 vs. ExPASy TrEMBL
Match: A0A6J1L0B7 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFKNEFSYEQR EESFEIL KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy TrEMBL
Match: A0A6J1CW54 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.0e-57
Identity = 111/118 (94.07%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKSKSFKNEF+YEQRFEE+FEILAKYPDRVPVIVERY+KCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLS RLHLAPGKALFVFVKNTLPQTASLMS+VYESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy TrEMBL
Match: A0A6J1GQC4 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.0e-57
Identity = 112/118 (94.92%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EF+YEQRF ESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy TrEMBL
Match: A0A6J1JMM5 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EF+YEQRF ESFEILAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLHLAPGKALFVFVKNTLPQT SLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. ExPASy TrEMBL
Match: A0A6J1H7R2 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.5e-56
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKSKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+KSFKNEFSYEQR EESFEIL KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Sed0006457 vs. TAIR 10
Match: AT3G15580.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-44
Identity = 82/114 (71.93%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   KSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           KSFK +++ ++R  ES EI+AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Sed0006457 vs. TAIR 10
Match: AT3G06420.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 5.3e-41
Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 5   KSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           KSFK++FS ++R +ES  I+AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV NTLPQTAS M ++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Sed0006457 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.2e-34
Identity = 65/113 (57.52%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK+E   E+R  E+  I  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++V
Sbjct: 5   SFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+F+FVKN LP TA++MS +YE +KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Sed0006457 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-33
Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 4   SKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFI 63
           + SFK E   E+R  ES  I  KYPDR+PVIVER E+ + P ++KKKYL+P D++VGQF+
Sbjct: 3   NSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFV 62

Query: 64  HVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +V+  R+ L+  KA+FVFVKNTLP TA++MS +Y+  KD+DGFLYM YS E TFG
Sbjct: 63  YVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Sed0006457 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-33
Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 4   SKSFKNEFSYEQRFEESFEILAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFI 63
           + SFK E   E+R  ES  I  KYPDR+PVIVER E+ + P ++KKKYL+P D++VGQF+
Sbjct: 17  NSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFV 76

Query: 64  HVLSTRLHLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +V+  R+ L+  KA+FVFVKNTLP TA++MS +Y+  KD+DGFLYM YS E TFG
Sbjct: 77  YVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

The following BLAST results are available for this feature:

BLAST of Sed0006457 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004698.1	3.8e-57	96.61	autophagy-related protein 8i-like [Cucurbita maxima]	[more]
XP_038898685.1	1.1e-56	94.92	autophagy-related protein 8i-like [Benincasa hispida]	[more]
XP_022954168.1	1.4e-56	94.92	autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy...	[more]
XP_022145376.1	1.4e-56	94.07	autophagy-related protein 8i-like [Momordica charantia]	[more]
KAG6575725.1	1.4e-56	94.92	Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0006457 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP7	1.4e-43	71.93	Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1	[more]
Q8S925	7.4e-40	64.91	Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1	[more]
Q2RBS4	6.3e-39	65.81	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D P...	[more]
Q9SL04	3.0e-33	57.52	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
Q2XPP5	4.0e-33	61.06	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]

BLAST of Sed0006457 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0B7	1.8e-57	96.61	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1	[more]
A0A6J1CW54	7.0e-57	94.07	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV...	[more]
A0A6J1GQC4	7.0e-57	94.92	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=...	[more]
A0A6J1JMM5	2.0e-56	94.07	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1	[more]
A0A6J1H7R2	4.5e-56	94.92	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=...	[more]

BLAST of Sed0006457 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15580.1	1.0e-44	71.93	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	5.3e-41	64.91	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	2.2e-34	57.52	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	5.3e-33	57.39	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	5.3e-33	57.39	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 15..118 e-value: 1.3E-43 score: 147.4
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 4.2E-50 score: 170.8
None	No IPR available	PANTHER	PTHR10969:SF81	AUTOPHAGY-RELATED PROTEIN	coord: 1..118
None	No IPR available	CDD	cd16108	Ubl_ATG8_like	coord: 29..113 e-value: 1.91138E-47 score: 145.414
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 5..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006457.1	Sed0006457.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule