Sed0006401 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGCAGCTCAGCCAAGTGTACGGTACACCCATAAGGCAACGGCCAACGCCGCCGCTGAGTAGCCGGAGAACCGCCGCATCCCAGGTGAGATCCGACGCCAGAAATGCTCAGGAGCTGCTAAAATCCGGCGAGGTTCAGGCAATCATGCCAAAGGAGGCATGGGCGGCCATAGATTCCGGCGGGTTTAGAGTTCTGGACATAAGGCCGGCGTGGGAGTGGGAGAAAGCTAGAGTGAAAGGGTCAGTGCATGTGCCGCTGTTCGTGAAGGACGAGGATTATGGGGCTGTTGGTCTTTTGAAGAAATGGGTACATTTTGGGTACATTGGATTGTGGACTGGCCAATACTTGACGACTTTGAATCCTGATTTTGTTCGAGATGTGGAGGTGGCTGTTCCCGATAAGAAGGCTAAGCTCCTTGTGGCTTGTGGCGAAGGGCTAAGGTTAGATTTCTTTTCAGTTTTTCTTCAATTTGCTTCACTTTTAATAGTGGGTTTCTTGTGGCTCCTGGGGGGTGTTTGTTTGACATATTTCGGTAATTTTTAGGTCAAAGAGTTATATTGATGAGTTATATCGAGTAGTTAAAAATTGAGAGTTGTGCAAAAAACTCGTTTTGGTGTAGTTTTTGTATAGAGAAGTTATAGTCAAAATCTTATTTGAATGTAAATTTAAAATGAGTAGTTATTTTTAATAGTTAAAAAAGAAATAATTCAAAATAAATGGTTAAAAATAAGTTATTTTGATTGATTTGAAAAGAATAATTAAAAATGAGTGCTTAGAAATAATTGAATAATTATAAAGTAACGATTAAAAGAAATGAGAGTTATTTTCATAAGTAAAATTGAGAAAAAGTTAGCAAAAACTTGTTTGGATGTAGGTTTTTAAGGAGTTAATAAATTCCAATCCCAACTTTGAGCTAAAAACATCAAACAAACAGCCCCTATGTTTTTTCCGCTAATTTATACGGTTCTTCTTGGATGTGGGGAGGCTTTTTTTCTTTTCTTTTTTTGATTTTGTTTTGGGAGAAACTGAGTTGATTCATTTTATTGCTCTATGGGAGATTTGATTTTTTTTTTTCTAGAGCAAGTAACTAATCTTAAAAATTAGACTATAGTCTATGATTGATTAATAGTTTAAAATTAATTTCTCATAATAGTTCACAAGTTAAATAAATAAAATAAGTGGATAAATAATGTGATGGGGTCCTTTTGTTTAATCGAACTCATCATACTAAAGTTGAATTGATATAATCAACTAACAAATAAAATAAGGGTAATTCTAATTCATTAAATGGACTAGATTCTATTTAACATATGACTAAATTTATAATTTATACGATTTTATTTTTGTTTATGTTATATAATGTTAAGGGGCTGTTTGTTTGACATATTTAAATAGTTTTTGGGTTAAGAAGTTATATTGAAAGGTTAAAAATTGAGAATTGTGTCAAAAATTCGTTTGGATGTAATTTTTGTATGGAGGAATTAGAGTCAAGACCTTGTTTGGGTGTAGAGTTAAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAAAATTATTAAAAATAAATGGTTAAAAATGAGTTATTTTGATTGATTTGAAAGAAATGATTAAAAATAAGTTGTTAGAAATGATTGAGTAGTTGTAAATGAATAGTTAAAAATGAGAGTTATTTTTAAAAGTAAAAATGAGAAGTTATTAAAAATTCATTTAGATATAGGTTTTTGAGGAGGAGTTAACATCTCCTATTTAAATATGTCAAACAAGCACTCCTAAGCTACAATTTTGGAAGAAATAAATGTCATCTTTTTTTAAAAAACATTTGGGGTGGGGAAGAAGAAATTAATGCCGTTAGAAATGATATGCTGCGGAACAAATGAATGGCAGTAGATTTGGAGAAAAACTAAAAATGGTAGTTTGTTTTATCATGCTTTTTCGTAATTCATAGATATCTAATTGTTATAAATGAGCCAGCTAGCGAGGATAGCGACATTAAATAACTTTATGTTAATTTTAGAATGAGAGTATACTAGAAAAACATAAAAAAGTAATACAAATTGGGTACCATATAGAGAGAGTGAAATAAATTTTAGTTTTTATAATTAAATAGTTACCATTTTGTTCCATGTGTTTTTTTAAGTATAAAGTAGAAAAAAAAGACCTAACAAATCTTATGTAAATGATAGAATTACTCTAAAGTAATATGAAAATTACGTCATTGACCCTCGATATTTTGTTCCATGCATTAGATGTGTTATTCACGAATTATTAAGATAGTAAATGTGGCTAGACATGCATTATAATAAAAATTAAGTTGTGATATTGAAAGGAATAAATCGTGGATTTACAACGCATTTTTCTTTGTTGACTTCCACACCGAGGATAGGAAAGAACAACGTAGAAAAGTGGTCCAAATATTCTTCTTAACCATTGACTGATAACATAACAATATATTTTTTTAACTCATCTTTGTCTACATGGATTTACCTTTTTACTGTTCTTTGCAAGCTCAGGTCATTGGTGGCAGTGTCCAAGTTATACAAGGAAGGATACAAGAACTTGGGGTGGTTGGCCGGCGGCTTTAATCGCTCCGGCGAGAGCGACTTTCCGGCCGTGGAAGGGCCGGAGAAACTACAATACGCCACTATCGGAGGAGTTTCTTACTTTTTCCTCCAATTGCTTATCCTCTTGCAAGCCGTGGGTAAAAACAATTGA ATGGCGGTGCAGCTCAGCCAAGTGTACGGTACACCCATAAGGCAACGGCCAACGCCGCCGCTGAGTAGCCGGAGAACCGCCGCATCCCAGGTGAGATCCGACGCCAGAAATGCTCAGGAGCTGCTAAAATCCGGCGAGGTTCAGGCAATCATGCCAAAGGAGGCATGGGCGGCCATAGATTCCGGCGGGTTTAGAGTTCTGGACATAAGGCCGGCGTGGGAGTGGGAGAAAGCTAGAGTGAAAGGGTCAGTGCATGTGCCGCTGTTCGTGAAGGACGAGGATTATGGGGCTGTTGGTCTTTTGAAGAAATGGGTACATTTTGGGTACATTGGATTGTGGACTGGCCAATACTTGACGACTTTGAATCCTGATTTTGTTCGAGATGTGGAGGTGGCTGTTCCCGATAAGAAGGCTAAGCTCCTTGTGGCTTGTGGCGAAGGGCTAAGGTCATTGGTGGCAGTGTCCAAGTTATACAAGGAAGGATACAAGAACTTGGGGTGGTTGGCCGGCGGCTTTAATCGCTCCGGCGAGAGCGACTTTCCGGCCGTGGAAGGGCCGGAGAAACTACAATACGCCACTATCGGAGGAGTTTCTTACTTTTTCCTCCAATTGCTTATCCTCTTGCAAGCCGTGGGTAAAAACAATTGA ATGGCGGTGCAGCTCAGCCAAGTGTACGGTACACCCATAAGGCAACGGCCAACGCCGCCGCTGAGTAGCCGGAGAACCGCCGCATCCCAGGTGAGATCCGACGCCAGAAATGCTCAGGAGCTGCTAAAATCCGGCGAGGTTCAGGCAATCATGCCAAAGGAGGCATGGGCGGCCATAGATTCCGGCGGGTTTAGAGTTCTGGACATAAGGCCGGCGTGGGAGTGGGAGAAAGCTAGAGTGAAAGGGTCAGTGCATGTGCCGCTGTTCGTGAAGGACGAGGATTATGGGGCTGTTGGTCTTTTGAAGAAATGGGTACATTTTGGGTACATTGGATTGTGGACTGGCCAATACTTGACGACTTTGAATCCTGATTTTGTTCGAGATGTGGAGGTGGCTGTTCCCGATAAGAAGGCTAAGCTCCTTGTGGCTTGTGGCGAAGGGCTAAGGTCATTGGTGGCAGTGTCCAAGTTATACAAGGAAGGATACAAGAACTTGGGGTGGTTGGCCGGCGGCTTTAATCGCTCCGGCGAGAGCGACTTTCCGGCCGTGGAAGGGCCGGAGAAACTACAATACGCCACTATCGGAGGAGTTTCTTACTTTTTCCTCCAATTGCTTATCCTCTTGCAAGCCGTGGGTAAAAACAATTGA MAVQLSQVYGTPIRQRPTPPLSSRRTAASQVRSDARNAQELLKSGEVQAIMPKEAWAAIDSGGFRVLDIRPAWEWEKARVKGSVHVPLFVKDEDYGAVGLLKKWVHFGYIGLWTGQYLTTLNPDFVRDVEVAVPDKKAKLLVACGEGLRSLVAVSKLYKEGYKNLGWLAGGFNRSGESDFPAVEGPEKLQYATIGGVSYFFLQLLILLQAVGKNN Homology
BLAST of Sed0006401 vs. NCBI nr
Match: XP_022934483.1 (rhodanese-like domain-containing protein 10 [Cucurbita moschata] >XP_023527561.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >XP_023527562.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >XP_023527563.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >XP_023527566.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >XP_023527567.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >XP_023527568.1 rhodanese-like domain-containing protein 10 [Cucurbita pepo subsp. pepo] >KAG6580474.1 Rhodanese-like domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017224.1 Rhodanese-like domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103 Identity = 188/215 (87.44%), Postives = 200/215 (93.02%), Query Frame = 0
BLAST of Sed0006401 vs. NCBI nr
Match: XP_022982756.1 (rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982757.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982759.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982760.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982761.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982762.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982763.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982764.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982765.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982766.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982767.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982768.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima] >XP_022982769.1 rhodanese-like domain-containing protein 10 [Cucurbita maxima]) HSP 1 Score: 382.1 bits (980), Expect = 3.2e-102 Identity = 186/215 (86.51%), Postives = 198/215 (92.09%), Query Frame = 0
BLAST of Sed0006401 vs. NCBI nr
Match: XP_038903628.1 (rhodanese-like domain-containing protein 10 [Benincasa hispida]) HSP 1 Score: 367.9 bits (943), Expect = 6.2e-98 Identity = 179/215 (83.26%), Postives = 193/215 (89.77%), Query Frame = 0
BLAST of Sed0006401 vs. NCBI nr
Match: XP_004137904.1 (rhodanese-like domain-containing protein 10 [Cucumis sativus] >KGN58758.1 hypothetical protein Csa_001919 [Cucumis sativus]) HSP 1 Score: 365.2 bits (936), Expect = 4.0e-97 Identity = 179/217 (82.49%), Postives = 196/217 (90.32%), Query Frame = 0
BLAST of Sed0006401 vs. NCBI nr
Match: XP_008442418.1 (PREDICTED: rhodanese-like domain-containing protein 10 isoform X1 [Cucumis melo]) HSP 1 Score: 364.4 bits (934), Expect = 6.8e-97 Identity = 177/217 (81.57%), Postives = 198/217 (91.24%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.5e-62 Identity = 112/181 (61.88%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.4e-25 Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18 Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy TrEMBL
Match: A0A6J1F7S6 (rhodanese-like domain-containing protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111441647 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.2e-104 Identity = 188/215 (87.44%), Postives = 200/215 (93.02%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy TrEMBL
Match: A0A6J1IXG0 (rhodanese-like domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481530 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102 Identity = 186/215 (86.51%), Postives = 198/215 (92.09%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy TrEMBL
Match: A0A0A0LA74 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731200 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97 Identity = 179/217 (82.49%), Postives = 196/217 (90.32%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy TrEMBL
Match: A0A1S3B6A9 (rhodanese-like domain-containing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486297 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97 Identity = 177/217 (81.57%), Postives = 198/217 (91.24%), Query Frame = 0
BLAST of Sed0006401 vs. ExPASy TrEMBL
Match: A0A5D3DMU9 (Rhodanese-like domain-containing protein 10 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00800 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95 Identity = 177/219 (80.82%), Postives = 198/219 (90.41%), Query Frame = 0
BLAST of Sed0006401 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-63 Identity = 112/181 (61.88%), Postives = 144/181 (79.56%), Query Frame = 0
BLAST of Sed0006401 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 115.2 bits (287), Expect = 6.7e-26 Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = 0
BLAST of Sed0006401 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 95.1 bits (235), Expect = 7.2e-20 Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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