Sed0006348 (gene) Chayote v1

Overview


Name	Sed0006348
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zeta-carotene desaturase
Location	LG11: 2201722 .. 2208394 (+)
RNA-Seq Expression	Sed0006348
Synteny	Sed0006348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAGGGAGTTTGAAATAAAATCTCATATTATATAGGTGGCGTGACATGGCAGCTTTCGTCGAACTCGCACGGCGGCGACACCGTCTCCAAGAGGAAAATGGCCGGAATCTGTTACAGTCCACCGCTCCCTCCATCTCTATCCCCCAAGGTCTGTATCTTCTACGGCAATCTCTTTTTGATCCTTATTCTCTCCGATTCGCTTTGAACCGTTCATTTTTTTGGCAGATTGTATCCGCCATACGATGTTTCTCAAGCTCGCCGGAGAAATTTAGCGGCAGCCGGAAGAATGAGGCCTCTGCGATTGTGAAAATCGCCGTGAGCGGAGTCACTGAGCTTCTTAGGGTTTTCTCCTCTCCGATTAGTAAGAGGTAATTTTGTTCTGAAATCTCGGATGCCTTGGACTATGATGCCCCATGATTACTTAGTCGATATAGCTTATTAGGCGGGATTTCGGTTTGGTTTTTGTTGGTACCGAACCAACCATTAGGTCCAAATGGATGCTCAATAAAGAACAAAACCATTGATTTGATTTTTCAAATGATTCGGTTAGTTTTGGTTGGATTTTGATTTCGATTAAAATTTGGTTTATTTTCCAATTTTTTGTCTTATTTTCAATTTGATTTTAAGAATTTTTATTTTATTAACCAAAATTAACATTTTCGATGAATAACTTAATATTTATAATACTTTTGCATTACTTCATATTTCACATCTAAATTTGTTATTCCGTCATATCTAAATGCCAATATTTTTTTAAAATTTTCAATTAGTATTCATATATTCGGTTTAGTTCAGTTTGGTTTTATATTGGTTCTTCCATCAACGACGGTAACCAAACCAATATATTTCGATTTTTTAAAATATCAAACCAAATGATCCAATATTGTTTTAAAAACTGACATGATCCACTGGATCGGTTTGATTTTTTTGGTTATCGATTTTTCCTTTCACCCCTATTTGCTATCCGGTCAACGAGTGAGGATCTTGCTGCCCGATCAATGCATCGGGGTCTAAGGGGAAGCGCCCAAGTGGAGGCTTGGGGACAACACCCCTAAAACTTAGATGAAATATGTAAAAGAGTTTATGTTTTCGCATTTGGGCTTGAGTCCTATGATATAATAGGATTTTATGAGAGTGCACTATATGAACTCTCTTAAAATTCTAACCTTATTTGATCCTTATTTTTGTATCTCTAATAAAACAATTCTCTTCTCTATCTATGGAAACAATCGTGTTAGTAAACCATGTAAATATTCATATTTTTGTTTCACCTTTTTTTATTGTTTTCTTTGATTGTTGTTCTGATTTCATAACATCTTTTTTTTTTATGAGGAAAATTAGGGATGTGTTGTTCTATGTTCTCGAGATTTTTACTTAGTTAGACGAGTAAATAGTTCTTGAACATGCGAGCAACAGACATGAATTCGATTTCGTTTGGTATTTGTCTGTGTTGCAGAGTTGATGTAGTTGAGGATAATCTGGGAGAGGAATTTGTAGTTTCAGGCATTGATGATGTTTTAAATATCCTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGTAAATTGATGGTTCACACTTTCTATGGCTGATTCTTTGTTTTCCTTTGCAATGCTTTGATTTCTGAGTTCTTCTTCCCTTATGGAATAGTTTTTTTTTTAAACAAGGGTAACCACACTCGTCCCTAGGACAGGCACCAAAAACATCGAAGAAGTAATGTCACAGGTGAATCTCGAACTTGAGACCTTGAAGGGAGCATACCTTCAAAACCCAAGTCTTCAACCACTGTGCTATCCCTTGGAGACCTTCCCTTATGGAAATTATTGACAACTAATTTTTGGTGTGTCTATCAAGCTCTCCAACCTGAATTCTCCAATATAATGATATGTTGTCAACCATTACATTGGCCTATCGGTTCAATAATGGCCTTGAGAATCATAAAATGCATATAGAGGAATGGTTTCGATCTATGGTGGTAAGCTATCTAGTAATAAATTTTCAACAAGTTACTTTGATAACTAAATATAGTAGGGTCAGACAATTGTCCCACCAGGATGGTCAAGGTGCGCATAACTCAAACTAGGATATATATATATATAATGATATGTTGTTTGTGTTTCGGGGGTGTTTTTTTTCCATATTTAAGGAGGATTTAGATTGAGGATTTACTAACTCCTTAAAAAAATACATCCAAACGAGATTTTTGTAACTACTCAAAATAACTCTTCATTTATAACCACTCATTTCTAATCATTCATTTATAACTCCTCATTTCTAAATACTCATTTCTAATCATTCATTTCTCACTTCTCTAAATAATTCATTTTTAACCGCTTATTTCTAATATTCTTTTTTTAATTACTCAAAATAAGTATTTATTTTAAATCCACATCCAAACAAGTTATCGTCTCTAACTTTTCTACATAAAAACCACATCTAAATAAGTTTTTTATTACAACTCTTAATTTCTAACTACTCAAAATAACTCCTCAAACTAATTCCTCAACCAAAACCTCATCCAAACACCTCCTTCAAGTTTAAAGCTGTTGCTCATAGCCATCTTTTTATGCAACTGGTATGAAAATTCTCTGCAAATTCTTGTTTGCAATGAAACATATACATTGAGATTCTAATGCTGCAAATTAGAGAACCTTTTAATATGAATGGGTGCTGTTTGTAAATGCTGCATTAAGTCAGAAATGAAGTTCTGGATGGGTATTTTATGATGGCTTTATTCTGGACACAGGAATATTCACTTCTGCAATTTATGCCAATGATTGTCTCTTTGAAGATCCAACCATCAGATTTCGAGGTAATAATAATCATAGAAATTCATATTTTGCTAAACTGGTGAAAAATTACCTTAAACAGCACAAACTGAATTAATTATTATTTAGTTTTGATGAAATACTTTGATTGAACAATCTCTTTATGCCTTAAAGTTGCTTTATGGGCTTTTTAACTCTATAGGTAAGGAGCTGTATTCACGGAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCAATCCAATTGCAAACAATCAGTAAGGTAATTTTGTTCTTGTGAATCAATCTTTTTTACTTTAGATTGATGAGTAAATGGATTTAGTTACTTATTAATATCTCCCAATCATGCAAAATGACTGCAACTTTGAGTTTCAACCTTCTGTATTGAGAGCCAAAATTGGTTAAGTTTTTGGTAAATTTAGGTGTTATTTGGCTGATAAAGGGACGATTGAATAGTATCCTCTTCATGGGTATGACATTTGGTTGTTCCAAATAATGTTATAAACATTTTTGGAGCTTTTAAAATATTGGCAAGTTCTTCATAGAATGGGACAGACAAGTACATAATAGTAGGGTGTACATGGTCCGAGTTGAATTGGGTCAGGAATTTTTTTTGGACTAACCCGAATTTTCGGGTTGGTCAATCTGCCAACCCGACCAACCCTATGTAGCAACCCAACTCATAGATTTCCAAGTTGGGTTGAGTTGAGTTATCGAGTTGTGTTTATCTCAATCTTTCCTCTTTAAGGCCTAGCCTAATAACCCATAAATTTGTAAAAAAATAATATTGTGAATAATACTAACTTGAACTCAAAATGTCTATCTTGTTAGTGTATACTCCCTAGCAACATGCTAAGAATCTATCTTGATTTTTGCTAATTAATCTTACACACATAAATATAATATTATTTTTAGTTCAAGTTGGATTGGACAACAAAAAATTGGCCGTCAAGAACTGACCCAATCCAAATAAAATTATATAATTATAACTCAACTCAACCCAAATAAAATTATAACCCTACCCAACCCTCCATAATAGTTTGTTCTTTCAGAGTTTATCTCAATTTGCTACTGCTCCTCGTACATTTTCTCATCTGATTCAGAAACTTATGCTGTATGTTACTTAAAAACATTTGCTGATTTTCATGACATGCATAACTGCAGGGTAACAAATCTGAAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGTAGTTAACCAAATCAACTCTCTTATTTGGATTAAGAAAGATTCAAGTACAACTACATTCTTTATAATTGCTTGAGCTTTATAGTACTGGAATCTCTTCATTTCTGATTTTGAGGCTTTATTTTGTATGAATTAAAAAAAGTGGAAATATGCAATATAATTCTTTATGCAGGTATTTTCAAGCATCTTTGTCCTGGTTTCTCTTTGCTGGATGGCGTAGCGCATCGGTTATTTAAATTTTCCGATGACAGCAGCTAATTCAAATTTCCAATATTCATGATTTCCGTGTGACTGGGTTGCAGGACATACCTAAAACTTCCATGGAGACCACTCGTTTCTATTGATGGAAGTACACTTTATGAACTGGATGAAGATTTGAAAGTGAGAATCACTATTCCTTTTAACTGTGTTCTTAAGATGGTCTTAAGATCATATTTGAAATTTATAAAAGTTTTATTGCAAGTGTTTTGCTAAAACACATTTTCCAATGTGTTTTTTCCACGCTTTTCTTTCAATAATCAACTGAAAACTAAAAATTCAGTAGCCAAAGCGCGCTTAGCCTAGTAATTTTGATATGTATCCCTGACCATGAGGTTGCAGCCTTGCAGGTTCATGTAGTTTCTTTTCATTCATTCACTCATCCCTTTTTCCTTAAATTTTTTGATTGGTTTGGGGCCTTGGGGTAACAAAAAATAATATAGGAGTATGTTAGCAATTACTTGGGGAGTAAGTAGAGACTTGTGGTTATAAACAGGAGAGGTTTTGTAAGGGGAAAGGTATGCATATTTTGAGTGATTACACTTTGGGCTCTAAGAGATGATTCTCTAGAGAAAGGGTGGTTTCAAGTGCTATTCAAACTTGAGTTATCTTGTAGTTCTTTTTTTTTGTTTTGATATGATCTAGATTCTGGATCTTGTCAATTGGTATCAAAGTAGTTTCATTTCTGGTCATGGAAATCTTAGAAGAGTTTAGAAGCATTAGTGAGAAATTGATATAATCTAGATCTTGGATCTTATCATTTTCTTTCTTTGGATAGTTAAAATTACTCTGCCATTGATATAACTTGGAAATATGCAAATCATACCTTTTGTTAATTGTCGGCCTTTTAGATTTTGATCAAATTACTGCATACTAAGTACACCACAGCACACTTAAGAGTAGCCAACCTATATGTGTATTAAAACCATTTTTAAAACACACAAGATTAATTTGCAAGTTTCTCAAGGTCCAAGGAGTGGCACAGTGGTTAAAGATTTGGATTTTGAAGGTATACTCTCTTCAAGGTCTCAGGTTCGAGACTCACATGTTATATTACTCCTTCGATATCTCCAGTGCCTAGCCTAAGTACGGGCGTGGTTACCCTTGTTTTAAATTTTTTTTTGCAAATACTTCATTGTTATCCTTTTCCAATATCATTTCAATCCATCTACAAATTAGTTAAAACTTATGATTTGCCGCATAGCTCAACTGGCATAGACCATCTAACCAATTCAAATCCCCCATATATTGATGAACTTACAAAAAAGTTAAAACTAATGATTTTTTGTTTTATGACATTTAGTACAAGCCCCAATATTTCTTTCCATTTTTCATCCTGTCAGATAGTAAGGCATGCTGAGAGCTGGAGTGTTTCTGCACTTGAAGCAATTGGTCAGATATTCAGACCTAGTTTTGGAGGAGATTGAGAATTGATTTGTACACAACTTTCTCCAAAAATCAGATCTTATAATGCCTGCCCCATGATGAATCCAAGTTGTTCATCATTTGATCTGTAAGTTATTCTTCTCTAACTTTTTATACAAACTGTCATTAGTTAAGCACTGTAGTTTACTTCCGATAATTGGCCTCGGGACAGCGTAGTTACCCTTATTTCAAAAAAAAAAAAAGCACGGTAGTTTACTTGTATAGAGTTGTATTCAACTGACTACAGCTTCGTCACCTTGTCGTGTAATTAAAATTAGGAAACATTCCAATGCTCTTTTGTTTCCTAGTTTATCTTATTGAACCCATCGACCGTGTTTTGTAACTAATGATAGGTCTTTTGTAACTTTTCATTTCAATGCAGTTTGGATAGAGACGTGTTTGGATAGAGACGTTATTGAGTATGTGGCTCGACTTACATGTGTTAGGCATGGACCTAAAGCCATAAAAGAGTATTTGAAGGAATGTACATCTCTTGTACCTGAACTTTCCAAATTAAGTGCTTCACCTAACCGAAGCGATAGATCATAACTATACTCGTTTTTAACATATGTCAGAGTCTGAGCTACCTTACATATATTTCGACATATTTATGAGACAACTCTCTTAAACCTACAACTTTTGGATGACCAAAAAAGTTCTATAGAAAATTAATATTTAAGAAAGTTGTATGATTGTAGATTATATGACTATACTTGTGATTCACTTAATAAGAATTTCGTCAACTTTTCGTCATGCTCTTTTTAGTTTCCTAGGGTGTGTTTGAGTTTCTATTTATGTAAACGACCGGGTTGGTTGTAATAACACAAACGATGTTTGTCTCACCGTTTATTATAAAATGTGGTTACCTAAACTTGCGTGCCCATTTATCTAAACCTTACATATATTACTTTTTCTTACATAACCAGTTCCTCCAACATTGTTTATCATAATTTTTGTTATAATAACTTGTCTTTCAAAC

mRNA sequence

AAAAAAGAAAGGGAGTTTGAAATAAAATCTCATATTATATAGGTGGCGTGACATGGCAGCTTTCGTCGAACTCGCACGGCGGCGACACCGTCTCCAAGAGGAAAATGGCCGGAATCTGTTACAGTCCACCGCTCCCTCCATCTCTATCCCCCAAGATTGTATCCGCCATACGATGTTTCTCAAGCTCGCCGGAGAAATTTAGCGGCAGCCGGAAGAATGAGGCCTCTGCGATTGTGAAAATCGCCGTGAGCGGAGTCACTGAGCTTCTTAGGGTTTTCTCCTCTCCGATTAGTAAGAGAGTTGATGTAGTTGAGGATAATCTGGGAGAGGAATTTGTAGTTTCAGGCATTGATGATGTTTTAAATATCCTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGAATATTCACTTCTGCAATTTATGCCAATGATTGTCTCTTTGAAGATCCAACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGGAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCAATCCAATTGCAAACAATCAGTAAGGGTAACAAATCTGAAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGACATACCTAAAACTTCCATGGAGACCACTCGTTTCTATTGATGGAAGTACACTTTATGAACTGGATGAAGATTTGAAAATAGTAAGGCATGCTGAGAGCTGGAGTGTTTCTGCACTTGAAGCAATTGGTCAGATATTCAGACCTAGTTTTGGAGGAGATTGAGAATTGATTTGTACACAACTTTCTCCAAAAATCAGATCTTATAATGCCTGCCCCATGATGAATCCAAGTTGTTCATCATTTGATCTTTTGGATAGAGACGTGTTTGGATAGAGACGTTATTGAGTATGTGGCTCGACTTACATGTGTTAGGCATGGACCTAAAGCCATAAAAGAGTATTTGAAGGAATGTACATCTCTTGTACCTGAACTTTCCAAATTAAGTGCTTCACCTAACCGAAGCGATAGATCATAACTATACTCGTTTTTAACATATGTCAGAGTCTGAGCTACCTTACATATATTTCGACATATTTATGAGACAACTCTCTTAAACCTACAACTTTTGGATGACCAAAAAAGTTCTATAGAAAATTAATATTTAAGAAAGTTGTATGATTGTAGATTATATGACTATACTTGTGATTCACTTAATAAGAATTTCGTCAACTTTTCGTCATGCTCTTTTTAGTTTCCTAGGGTGTGTTTGAGTTTCTATTTATGTAAACGACCGGGTTGGTTGTAATAACACAAACGATGTTTGTCTCACCGTTTATTATAAAATGTGGTTACCTAAACTTGCGTGCCCATTTATCTAAACCTTACATATATTACTTTTTCTTACATAACCAGTTCCTCCAACATTGTTTATCATAATTTTTGTTATAATAACTTGTCTTTCAAAC

Coding sequence (CDS)

ATGGCCGGAATCTGTTACAGTCCACCGCTCCCTCCATCTCTATCCCCCAAGATTGTATCCGCCATACGATGTTTCTCAAGCTCGCCGGAGAAATTTAGCGGCAGCCGGAAGAATGAGGCCTCTGCGATTGTGAAAATCGCCGTGAGCGGAGTCACTGAGCTTCTTAGGGTTTTCTCCTCTCCGATTAGTAAGAGAGTTGATGTAGTTGAGGATAATCTGGGAGAGGAATTTGTAGTTTCAGGCATTGATGATGTTTTAAATATCCTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGAATATTCACTTCTGCAATTTATGCCAATGATTGTCTCTTTGAAGATCCAACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGGAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCAATCCAATTGCAAACAATCAGTAAGGGTAACAAATCTGAAGTTGAATTTGTGTTGGCAGCATGGAAACTAAGGACATACCTAAAACTTCCATGGAGACCACTCGTTTCTATTGATGGAAGTACACTTTATGAACTGGATGAAGATTTGAAAATAGTAAGGCATGCTGAGAGCTGGAGTGTTTCTGCACTTGAAGCAATTGGTCAGATATTCAGACCTAGTTTTGGAGGAGATTGA

Protein sequence

MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSSPISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSIDGSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD

Homology

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BLAST of Sed0006348 vs. NCBI nr
Match: XP_023545588.1 (uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 196/219 (89.50%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  +GSR+ EASAIVKIAVSGVTELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRRKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD V DN GEEFVV+GIDDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. NCBI nr
Match: XP_022946926.1 (uncharacterized protein LOC111450860 [Cucurbita moschata])

HSP 1 Score: 391.3 bits (1004), Expect = 5.3e-105
Identity = 196/219 (89.50%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  + SRK EASAIVKIAVSGVTELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD V DN GEEFVV+GIDDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. NCBI nr
Match: XP_022999247.1 (uncharacterized protein LOC111493675 [Cucurbita maxima])

HSP 1 Score: 390.6 bits (1002), Expect = 9.0e-105
Identity = 195/219 (89.04%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  +GSRK EASAIVKIAVSG TELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRV+ V DN GEEFVV+GIDDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. NCBI nr
Match: KAG6599294.1 (hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 195/219 (89.04%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  + SRK EASAIVKIAVSGVTELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD V DN GEEFVV+G+DDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGMDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. NCBI nr
Match: XP_004139222.1 (uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hypothetical protein Csa_019272 [Cucumis sativus])

HSP 1 Score: 381.3 bits (978), Expect = 5.5e-102
Identity = 187/216 (86.57%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           MAGICY PPLPPSLSPK VS IRCFSSSPE  +GSRK EASAIVKI VSG+TELLR+FSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD + DN GEEFVV+G+D+V+NILKSDYENAYFVTGIFTSAIY +DCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+K NKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSF 217
           G+TLYELDE+ KIVRHAESWSVSALEAI QIF PSF
Sbjct: 181 GNTLYELDEEFKIVRHAESWSVSALEAITQIFIPSF 216

[Close]

BLAST of Sed0006348 vs. ExPASy TrEMBL
Match: A0A6J1G4Y1 (uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC111450860 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.6e-105
Identity = 196/219 (89.50%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  + SRK EASAIVKIAVSGVTELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD V DN GEEFVV+GIDDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. ExPASy TrEMBL
Match: A0A6J1KAD4 (uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.4e-105
Identity = 195/219 (89.04%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           M GICY PPLPPSLSPK+V+AIRCFSSSPE  +GSRK EASAIVKIAVSG TELLR+FSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRV+ V DN GEEFVV+GIDDVLNILKSDYENAYFVTGIFTSAIYA+DCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+KGNKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           GSTLYELDE+LKI RHAESWSVSALEAI QIF PSF GD
Sbjct: 181 GSTLYELDEELKIARHAESWSVSALEAITQIFIPSFKGD 219

[Close]

BLAST of Sed0006348 vs. ExPASy TrEMBL
Match: A0A0A0LJD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.7e-102
Identity = 187/216 (86.57%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           MAGICY PPLPPSLSPK VS IRCFSSSPE  +GSRK EASAIVKI VSG+TELLR+FSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD + DN GEEFVV+G+D+V+NILKSDYENAYFVTGIFTSAIY +DCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+K NKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSF 217
           G+TLYELDE+ KIVRHAESWSVSALEAI QIF PSF
Sbjct: 181 GNTLYELDEEFKIVRHAESWSVSALEAITQIFIPSF 216

[Close]

BLAST of Sed0006348 vs. ExPASy TrEMBL
Match: A0A1S3C2Z9 (uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 179/219 (81.74%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           MAGI Y PPLPPSLSPK VSAIRC SSSPE  +GSRK EAS I+KI VSG+TELLR+FSS
Sbjct: 1   MAGISYCPPLPPSLSPKTVSAIRCLSSSPENSNGSRKKEASTILKITVSGITELLRLFSS 60

Query: 61  PISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIR 120
           PISKRVD + DN  EEFVV+G+D+V++ILKSDYENAYFVTG FTSAIY + CLFEDPTIR
Sbjct: 61  PISKRVDGIRDNQEEEFVVTGVDEVVDILKSDYENAYFVTGTFTSAIYTDHCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSID 180
           FRGKELYSRNLKLLVPFFDCPSIQL+TI+K NKS VEFVLAAWKLRTYLKLPWRPL+SID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLKTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSFGGD 220
           G+TLYELD++ KIVRHAESWSVSALEAI QIF PSF  D
Sbjct: 181 GNTLYELDDEFKIVRHAESWSVSALEAITQIFIPSFERD 219

[Close]

BLAST of Sed0006348 vs. ExPASy TrEMBL
Match: A0A6J1CMH1 (uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111012984 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.1e-91
Identity = 179/243 (73.66%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 1   MAGICYSPPLPPSLSPKIVSAIRCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFSS 60
           MAGIC SPPLP SLSPK    +RCFSSSP+   G RK EAS IVKIAVSGVTELLR+FSS
Sbjct: 34  MAGICCSPPLPSSLSPKTKYDVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSS 93

Query: 61  P------------------------ISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENA 120
                                    +S R D V DN  EEFVV+G+DDVL+ILKSDY+NA
Sbjct: 94  SKSSTPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEEFVVAGVDDVLDILKSDYKNA 153

Query: 121 YFVTGIFTSAIYANDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEV 180
           YFVTGIFTS IYA+DCLFEDPTI+FRGKELYSRNLKLLVPFFDCPSIQLQ I+KGNKS V
Sbjct: 154 YFVTGIFTSEIYADDCLFEDPTIKFRGKELYSRNLKLLVPFFDCPSIQLQKINKGNKSGV 213

Query: 181 EFVLAAWKLRTYLKLPWRPLVSIDGSTLYELDEDLKIVRHAESWSVSALEAIGQIFRPSF 220
           EFV+AAWKLRTYLKLPWRPL++I GSTLYELDE+LKIVRHAESWSVSALEAIGQIF PSF
Sbjct: 214 EFVVAAWKLRTYLKLPWRPLITIHGSTLYELDEELKIVRHAESWSVSALEAIGQIFIPSF 273

[Close]

BLAST of Sed0006348 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61
Identity = 114/191 (59.69%), Postives = 142/191 (74.35%), Query Frame = 0


Query: 23  RCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFS-SPISKRVDVVEDNLGEEFVVSG 82
           RCFS SPEK       +  A++K AVSGVTE LR+ S +P S  +   +D    E     
Sbjct: 24  RCFSGSPEK-------KTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 83  IDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 142
           +DDV+ IL+SDY N YFVTG+ TSAIY++DC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 143 SIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSIDGSTLYELDEDLKIVRHAESWS 202
           SI+LQ + K   S+  ++LA WKLRTYLKLPWRPL+SI+G+T+Y+LD+D KIVRH ESW+
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFKIVRHVESWN 203

Query: 203 VSALEAIGQIF 213
           VSALEAIGQIF
Sbjct: 204 VSALEAIGQIF 207

[Close]

BLAST of Sed0006348 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 196.8 bits (499), Expect = 1.8e-50
Identity = 96/171 (56.14%), Postives = 123/171 (71.93%), Query Frame = 0


Query: 23  RCFSSSPEKFSGSRKNEASAIVKIAVSGVTELLRVFS-SPISKRVDVVEDNLGEEFVVSG 82
           RCFS SPEK       +  A++K AVSGVTE LR+ S +P S  +   +D    E     
Sbjct: 24  RCFSGSPEK-------KTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 83  IDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 142
           +DDV+ IL+SDY N YFVTG+ TSAIY++DC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 143 SIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVSIDGSTLYELDEDLK 193
           SI+LQ + K   S+  ++LA WKLRTYLKLPWRPL+SI+G+T+Y+LD+D K
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFK 187

[Close]

BLAST of Sed0006348 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 51/160 (31.87%), Postives = 75/160 (46.88%), Query Frame = 0


Query: 59  SSPISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPT 118
           +SPI    +V  D  G    V+ +D +    K D++ +YFVTG  T  +Y   C F DP 
Sbjct: 83  TSPIVTGFEVPVDCSGRAVRVAVVDSI----KQDFKRSYFVTGNLTPEVYEEKCEFADPA 142

Query: 119 IRFRGKELYSRNLKLLVPFFDCPSIQLQTISKGNKSEVEFVLAAWKLRTYLKLPWRPLVS 178
             F+G   + RN        +  +++L    K    E +  +  WK    +  PW+P++S
Sbjct: 143 GSFKGLARFKRNCTNFGSLIEKSNMKLM---KWENFE-DKGIGHWKFSCVMSFPWKPILS 202

Query: 179 IDGSTLYELD-EDLKIVRHAESWSVSALEAIGQIFRPSFG 218
             G T Y  D E  KI RH E W+V  +    Q+ RPS G
Sbjct: 203 ATGYTEYYFDTESGKICRHVEHWNVPKIALFKQLLRPSRG 234

[Close]

BLAST of Sed0006348 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-05
Identity = 25/72 (34.72%), Postives = 36/72 (50.00%), Query Frame = 0


Query: 59  SSPISKRVDVVEDNLGEEFVVSGIDDVLNILKSDYENAYFVTGIFTSAIYANDCLFEDPT 118
           +SPI    +V  D  G    V+ +D +    K D++ +YFVTG  T  +Y   C F DP 
Sbjct: 83  TSPIVTGFEVPVDCSGRAVRVAVVDSI----KQDFKRSYFVTGNLTPEVYEEKCEFADPA 142

Query: 119 IRFRGKELYSRN 131
             F+G   + RN
Sbjct: 143 GSFKGLARFKRN 150

The following BLAST results are available for this feature:

BLAST of Sed0006348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545588.1	1.8e-105	89.50	uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo]	[more]
XP_022946926.1	5.3e-105	89.50	uncharacterized protein LOC111450860 [Cucurbita moschata]	[more]
XP_022999247.1	9.0e-105	89.04	uncharacterized protein LOC111493675 [Cucurbita maxima]	[more]
KAG6599294.1	1.2e-104	89.04	hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004139222.1	5.5e-102	86.57	uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hy...	[more]

BLAST of Sed0006348 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Y1	2.6e-105	89.50	uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]
A0A6J1KAD4	4.4e-105	89.04	uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675...	[more]
A0A0A0LJD8	2.7e-102	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1	[more]
A0A1S3C2Z9	1.7e-96	81.74	uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=...	[more]
A0A6J1CMH1	6.1e-91	73.66	uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0006348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04890.1	2.2e-61	59.69	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	1.8e-50	56.14	Uncharacterized conserved protein (DUF2358)	[more]
AT2G46100.1	1.7e-16	31.88	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	3.0e-05	34.72	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 57..163 e-value: 4.5E-5 score: 25.3
None	No IPR available	PANTHER	PTHR34123:SF4	PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN, PUTATIVE (DUF2358)-RELATED	coord: 24..168
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 24..168
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 37..149 e-value: 2.7E-22 score: 79.2
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 59..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006348.1	Sed0006348.1	mRNA
Sed0006348.2	Sed0006348.2	mRNA
Sed0006348.3	Sed0006348.3	mRNA
Sed0006348.4	Sed0006348.4	mRNA