Sed0006326 (gene) Chayote v1

Overview


Name	Sed0006326
Type	gene
Organism	Sechium edule (Chayote v1)
Description	elongator complex protein 6
Location	LG04: 39607609 .. 39610469 (+)
RNA-Seq Expression	Sed0006326
Synteny	Sed0006326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAACATAACTATAGTTGCTACTTCGAATTGAGAGAGATCATTTATGGACCGAAAGAGTTTGAATTTGCTTGACGAAGCTCTTCTAGGGTTTGATGATTCCACCGATCCGCCGCCGCTGATCGGCCGCCTGTTGGTGGTGGAGGATTCCGTCCAAACAAGCGGCGCTTTCGTTCTTCATCATCTCCTCAGGCGCGCCTTTTCTTCTCCCCACTCTTCCAATGCCGTCGTCTTCATCGCTTTCTCTCACCCCTTCCCCCACTACGACCGCGTCCTCAGGAAACTGGTACCCAACTCATTTCAATCCTCCACTTCCACTTCTTCTTCTTACTTTTTCAATTTTAAGCATTGTTATTTACAGTGTTGTGTTTCGTTTATGGAAGGCAAGGCAGGCTTTAGCTGTGCATAATGTATATAATGAATGTTTTTTTTTGACATATTAGCATTTTAGCGATGAATATGCATACCAATCCGGAATCTGGATGGTGGGTCTCTGTTTTCGTTTATCTGTGTGATGTTATCTGCTGAGTTCTGTGAATTAGTGATATGAAAAAGATGCAAAAGAGAGCCTATCAAAACAAGATGTATTTGGGATCCACCAAAAACTATGTTCACTCTATTTCTTTCATAGTCTGTCGATTCGTTACATTAATTTTGTGTTCAGAATGAGAGATGTATTCATTGTTCAACTGTTTTTTACTCAGGGTTGTAACATAGCTGCTCAAAGGGACAGTGGCAGGTTCGTTTTCTTTGACATGCTTACGCTCGGGTGTTCAGGTGAGAAAACCAGGTATAATAGTATATCCTCATTTAGCTTTTAATCTTTCCATTTCTGTTGAAGTAGCTCTATTTCCAAATTCAAACTTGTGTAAAAGATAATTTAGTTAGACTTAGGAAAGGGTTCATTGCACATCCAGCTATTGATGAGAAGTAGGTTCTTTCCCCCAATTTTTCTTATTTTTCGTGAAGAATTGTTTCATAATTTATTGAATCCCTTACTTTTCACTGAGCTTGGCGTCTCGATAAACATGAAATGAAGACAGATTCATAGTTAAAATAGTCTACAAGAGGCAACCTCATTGACATAGGTTTTGGGTTGTCAAGATATGCTTCCTTAGTGGTCTAAAGTTTGAAACTCGTTGATGACCTTAATTGTAAAGTCCTTTGTAGTGTGCCTCCCAAGACTGATCGCAGGTACCTCCAGATATGTAGTGGAGCAAAACTCTGATTCCCAATTATCAATATAAATAATAGGAAAACTGTCCATATCTATTAAATTTATTGTGATTTTCATCTTTCCATCATGTAAGAAGTTCATGAATCCTTTATATGTTACAAAATTTTATATTGTTATTATTAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTCGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATAAAGGAGAACAAAAAGCATGTCACCATCGTGATAGATGATATTCCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCGCACTTTAACATCAGAAATTGTAATACTCTTTAACCTGACTAAAATTTTCTCATCTTCACATATCCTTGTCATTTACCATCCCCAGTTCTCATAATTCACTCTTGTCACAGGGTTGTTCCATAATTGCACTTAATCACGAAGACGTTTACATGGACAACGAGAGGTCACTGATTCTACAGATGGAATACCTTGCTGATGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGGTGCCATTCTTGTTTTTGCAGTTTACGTGTTTACGAATTTGTTTCTTTGTGTCTCGTTATGTTTGAATTACTTTCCCCTATGTTTTCCTGGGTCAAGAATTGTTCAACAGCTTTAACAAACTAAACGTGCTTAGAAAAAAGAAAAAGGAAAGAAACTCTTCTTGATCTTAGTAACTTATAATTTCCTCCAGATTTCTGGTCTTACATGTGGGGCTGTTGATGACACTATTGTCTTTATTGTCTTTGTAGTTATGGATTCAATTCACGGTGGCCTCTTACCTATGTATTAATTTCCTACAGATTTGTTTGACGTTAAACTGTTGTCGAGTCAAGCGATATGTTTTGTGACATTAATCGTGGTGCATGCAATTGAACAGTCACATATATAAAAGAAATGATACTATTGTCTTTATAGTGTGTAGTCCTTTAGTCGATAATTTCGTATTAGTGCCAATGCAATTGAGGAAAAAAAAATGGTAGAAGAATTATATTTCTATTGAGAAGAGACTTTCTTGACCTACCTTAAATAATTCTTCTCCTGTGACCGTGCATGTATTCCATGCTGTTATAGATGTAACTATAGTTAGTATTTGCTCTGTCGAGTTTAAATATACAAAGCAATTCTAATATAGTTTTCAATATCAATTAAACTGCCATGCGGACAACCATACTTTTTTTTTTTTTTTTTCTTTTTCGTCGTTTGCCATGAATTTATTCAATCGTAATTCGTAATCGTGTTACATTTTCTTCACTGCAGCTGACAGTTATGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAAAGTGCACAACTTTCACTTTTATATCAAAGAAACTGGTACAGAATTTTTCTATTCTGGAAGCAGAGCTTGAGGAAAGTTTTGGGCGGGAAAAGTTGAGAGATATTATAATTTAACCTCTGTACCCTTTCTGGCTATTGTTATGATGGAGTTGTTGCTAGACTTTGATCACCTGTTGATTTTGTTTATGCAATTGTACTGACGTTATTATGCCCATGTTAATGAAAGAGTTATTATAAATTGAAGTTATAA

mRNA sequence

AAACAAACATAACTATAGTTGCTACTTCGAATTGAGAGAGATCATTTATGGACCGAAAGAGTTTGAATTTGCTTGACGAAGCTCTTCTAGGGTTTGATGATTCCACCGATCCGCCGCCGCTGATCGGCCGCCTGTTGGTGGTGGAGGATTCCGTCCAAACAAGCGGCGCTTTCGTTCTTCATCATCTCCTCAGGCGCGCCTTTTCTTCTCCCCACTCTTCCAATGCCGTCGTCTTCATCGCTTTCTCTCACCCCTTCCCCCACTACGACCGCGTCCTCAGGAAACTGGGTTGTAACATAGCTGCTCAAAGGGACAGTGGCAGGTTCGTTTTCTTTGACATGCTTACGCTCGGGTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTCGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATAAAGGAGAACAAAAAGCATGTCACCATCGTGATAGATGATATTCCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCGCACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGACGTTTACATGGACAACGAGAGGTCACTGATTCTACAGATGGAATACCTTGCTGATGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTATGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAAAGTGCACAACTTTCACTTTTATATCAAAGAAACTGGTACAGAATTTTTCTATTCTGGAAGCAGAGCTTGAGGAAAGTTTTGGGCGGGAAAAGTTGAGAGATATTATAATTTAACCTCTGTACCCTTTCTGGCTATTGTTATGATGGAGTTGTTGCTAGACTTTGATCACCTGTTGATTTTGTTTATGCAATTGTACTGACGTTATTATGCCCATGTTAATGAAAGAGTTATTATAAATTGAAGTTATAA

Coding sequence (CDS)

ATGGACCGAAAGAGTTTGAATTTGCTTGACGAAGCTCTTCTAGGGTTTGATGATTCCACCGATCCGCCGCCGCTGATCGGCCGCCTGTTGGTGGTGGAGGATTCCGTCCAAACAAGCGGCGCTTTCGTTCTTCATCATCTCCTCAGGCGCGCCTTTTCTTCTCCCCACTCTTCCAATGCCGTCGTCTTCATCGCTTTCTCTCACCCCTTCCCCCACTACGACCGCGTCCTCAGGAAACTGGGTTGTAACATAGCTGCTCAAAGGGACAGTGGCAGGTTCGTTTTCTTTGACATGCTTACGCTCGGGTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTCGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATAAAGGAGAACAAAAAGCATGTCACCATCGTGATAGATGATATTCCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTAGACTTCCTTCATTATTGCCGCACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGACGTTTACATGGACAACGAGAGGTCACTGATTCTACAGATGGAATACCTTGCTGATGTTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTATGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAAAGTGCACAACTTTCACTTTTATATCAAAGAAACTGGTACAGAATTTTTCTATTCTGGAAGCAGAGCTTGA

Protein sequence

MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNAVVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIALNHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKVHNFHFYIKETGTEFFYSGSRA

Homology

[Close]

BLAST of Sed0006326 vs. NCBI nr
Match: XP_038893352.1 (elongator complex protein 6 [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.5e-125
Identity = 224/261 (85.82%), Postives = 243/261 (93.10%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M+R + NLLDEA +GFDD T P PLIGR+L+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MNRMTSNLLDEA-IGFDDPTKPSPLIGRMLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+FIAFS  F HYDRVLRKLGCN+AAQRDSGRF+FFDMLTLGCSDRSGKE+ EGVLVGLY
Sbjct: 61  VIFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFIFFDMLTLGCSDRSGKESGEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAV+ALI+ENK+HVTI+IDDIPLLEVAANGSS HVLDFLHYC TLTSEIGCSIIAL
Sbjct: 121 CKIQRAVNALIQENKRHVTIMIDDIPLLEVAANGSSTHVLDFLHYCHTLTSEIGCSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           NHEDVY+D ER LILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPV GLQD LRN+V
Sbjct: 181 NHEDVYVDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
           HNFHFYIKE GTEFFYSGS+A
Sbjct: 241 HNFHFYIKENGTEFFYSGSKA 260

[Close]

BLAST of Sed0006326 vs. NCBI nr
Match: XP_022139240.1 (elongator complex protein 6 [Momordica charantia])

HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-124
Identity = 222/260 (85.38%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           MDR + N+LDEA LG DD   P PLIGRLL+VED V+TSGAF+LHHLL+R+ SSP SSNA
Sbjct: 1   MDRMASNMLDEA-LGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+FIAFS  F HYDRVLRKLGCN+ AQRDSGRF+FFDMLTLGCSDRSGKETDEGVLVGLY
Sbjct: 61  VIFIAFSQXFAHYDRVLRKLGCNLVAQRDSGRFIFFDMLTLGCSDRSGKETDEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAV+ALI++NKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYC TLTSEIGCS+IAL
Sbjct: 121 CKIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSLIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           NHEDVYMD ER  ILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPVGGLQDNLRN+V
Sbjct: 181 NHEDVYMDTERPRILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSR 261
            NF FYIKE GTEFFYSGSR
Sbjct: 241 RNFQFYIKENGTEFFYSGSR 259

[Close]

BLAST of Sed0006326 vs. NCBI nr
Match: XP_023533346.1 (elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-123
Identity = 224/261 (85.82%), Postives = 240/261 (91.95%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M R + NLLDEA +G DDST   PL+GRLL+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MSRMTSNLLDEA-IGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+FIAFS  F HYDRVLRKLGCN+AAQRDS RF F DMLT+GCSDRSGKET EGVLVGLY
Sbjct: 61  VIFIAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAVSALI+ENK+HVTIVIDDIPLLEVAANGSSNHVLDFLHYC TLTSEIGCSIIAL
Sbjct: 121 CKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVY+D ER LILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPVGGLQ+NLRN+V
Sbjct: 181 SHEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
           HNF FYIKE GTEFFYSGSRA
Sbjct: 241 HNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Sed0006326 vs. NCBI nr
Match: XP_022957322.1 (elongator complex protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 1.4e-123
Identity = 221/261 (84.67%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M R + NLLDEA +G DDST+  PL+GRLL+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MSRMTSNLLDEA-IGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+F+AFS  F HYDRVLRKLGCN+AAQRDS RF F DMLT+GCSDRSGKETDEGVLVGLY
Sbjct: 61  VIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETDEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAVSALI+ENK+HVTI+IDDIPLLEVAANGSSNHVLDFLHYC TLTSEIGCSIIAL
Sbjct: 121 CKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVY+D ER LILQMEYLA++LIKVGPLATGIAKDVHGQLTV+NKPVGGLQ+NLRN+V
Sbjct: 181 SHEDVYLDIERPLILQMEYLAEILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
           HNF FYIKE GTEFFYSGSRA
Sbjct: 241 HNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Sed0006326 vs. NCBI nr
Match: KAG7031849.1 (Elongator complex protein 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 447.6 bits (1150), Expect = 7.4e-122
Identity = 224/271 (82.66%), Postives = 241/271 (88.93%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M R + NLLDEA +G DDST+  PL+GRLL+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MSRMTSNLLDEA-IGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCS----------DRSGKE 120
           V+F+AFS  F HYDRVLRKLGCN+AAQRDS RF F DMLT+GCS          DRSGKE
Sbjct: 61  VIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSGEKTSFFLLPDRSGKE 120

Query: 121 TDEGVLVGLYCKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLT 180
           TDEGVLVGLYCKIQRAVSALI+ENK HVTIVIDDIPLLEVAANGSSNHVLDFLHYC TLT
Sbjct: 121 TDEGVLVGLYCKIQRAVSALIQENKSHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLT 180

Query: 181 SEIGCSIIALNHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVG 240
           SEIGCSIIAL+HEDVY+D ER LILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPVG
Sbjct: 181 SEIGCSIIALSHEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVG 240

Query: 241 GLQDNLRNKVHNFHFYIKETGTEFFYSGSRA 262
           GLQ+NLRN+VHNF FYIKE GTEFFYSGSRA
Sbjct: 241 GLQENLRNRVHNFQFYIKENGTEFFYSGSRA 270

[Close]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot
Match: Q8L9Y2 (Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.7e-71
Identity = 139/265 (52.45%), Postives = 189/265 (71.32%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDS-TDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSN 60
           MDR SLNLLD A LGFD+    P PL G+++++ED V+TSG+FVLH L++R  SS +SS+
Sbjct: 1   MDR-SLNLLDLA-LGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSD 60

Query: 61  AVVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGL 120
           A++F+AF+ PF HYDR+LRKLGCN+A  + + R VFFDML + CSD    E +   +  L
Sbjct: 61  ALIFLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKL 120

Query: 121 YCKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGS-SNHVLDFLHYCRTLTSEIGCSII 180
           + +IQ  V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYC TL+SE  CS++
Sbjct: 121 FREIQETVRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLV 180

Query: 181 ALNHEDVYMDNER-SLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGL-QDNL 240
            LNHED+Y   ER + +LQM  LADV+IK  PLA+G+A DVHGQLTV+NK +    + + 
Sbjct: 181 ILNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSS 240

Query: 241 RNKVHNFHFYIKETGTEFFYSGSRA 262
           RNK+ NF F IKE G ++FY G R+
Sbjct: 241 RNKLQNFQFRIKENGIDYFYPGCRS 262

[Close]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot
Match: Q0IHA2 (Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18
Identity = 70/251 (27.89%), Postives = 128/251 (51.00%), Query Frame = 0


Query: 26  IGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNAVVFIAFSHPFPHYDRVLRKLGCNIA 85
           +G+  ++ DS  T G+F++HH L        +   V F+A    F HY+ V +KLG N++
Sbjct: 18  LGKFTLLCDS-NTDGSFLVHHFLSYYL---RAGCRVCFVALVQSFSHYNIVAQKLGVNLS 77

Query: 86  AQRDSGRFVFFDML----TLGCSDRSGKETDEGV--------LVGLYCKIQRAVSALIKE 145
           + +D G+ VF + L     L   D+S  E    +        L  LY  +  A++    +
Sbjct: 78  SAKDEGQLVFLEGLKSYTDLLFGDKSEAEETNPLCFLRAGSDLRPLYSFVSAALAPSAGQ 137

Query: 146 NKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCR-TLTSEIGCSIIALNH-EDVYMDNER 205
             K   +++DD+ +L ++   +S  VLDF+HYCR T+ ++   +++ L H  +   D E 
Sbjct: 138 PWKCPVLILDDLSVL-LSLGVTSLQVLDFMHYCRATVCTQYKGNVLCLVHGAEESGDEEN 197

Query: 206 SLILQ-MEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKVHNFHFYIKET 262
            L+L+ + + + ++++   L+TG  KDVHGQL ++   V   +   +N+   + + I++ 
Sbjct: 198 ELVLRSLSHQSHLILQAEGLSTGFCKDVHGQLKIIRGAVSSGKRG-KNQPEIYQYKIQDK 257

[Close]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot
Match: Q8BK75 (Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 69/257 (26.85%), Postives = 121/257 (47.08%), Query Frame = 0


Query: 19  STDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNAVVFIAFSHPFPHYDRVLR 78
           ST P       L +    +T G+F++HH L        ++  V F+A    F HY+ V +
Sbjct: 10  STTPDKTEQGTLTLLCDAKTDGSFLVHHFLSFYLK---ANCKVCFVALVQSFSHYNIVGQ 69

Query: 79  KLGCNIAAQRDSGRFVFFDMLTLGCSD-----------RSGKETDEGVLVGLYCKIQRAV 138
           KLG ++ A RD G+ VF + L                 +  +E   G L  LY  IQ  +
Sbjct: 70  KLGVSLTAARDRGQLVFLEGLKSSVEVLFHSQDEPHPLQFLREAGTGNLQSLYTFIQDTL 129

Query: 139 SALIKENK--KHVTIVIDDIPLLEVAANGSSNHVLDFLHYCR-TLTSEIGCSIIALNH-- 198
                E    K+  +++D++ +L ++    +  VLDF+ YCR T+  E+  +++AL H  
Sbjct: 130 KPADSEESPWKYPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDT 189

Query: 199 EDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVM-NKPVGGLQDNLRNKVH 258
           E    +   +L+  + + + ++++   LATG  KDVHGQL+++  +P        R +  
Sbjct: 190 EGATDEGNDTLLNGLSHQSHLILRAEGLATGFCKDVHGQLSILWRRPSRSTAQ--RAQSL 249

[Close]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot
Match: B2RYG8 (Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 71/252 (28.17%), Postives = 126/252 (50.00%), Query Frame = 0


Query: 27  GRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNAVVFIAFSHPFPHYDRVLRKLGCNIAA 86
           G+L ++ D+ +T G+F++HH L        ++  V F+A    F HY+ V +KLG ++ A
Sbjct: 19  GKLTLLCDA-KTDGSFLVHHFLSFYLK---ANCKVCFVALVQSFSHYNIVGQKLGVSLTA 78

Query: 87  QRDSGRFVFFDML-----TLGCSDRSG------KETDEGVLVGLYCKIQRAVSALIKENK 146
            R+ G+ VF + L      L  S          +E   G L  LY  IQ  +        
Sbjct: 79  ARERGQLVFLEGLKSSVEVLFHSQEEPHPLQFLREAGAGNLQSLYTFIQDTLKPADSGES 138

Query: 147 --KHVTIVIDDIPLLEVAANGSSNHVLDFLHYCR-TLTSEIGCSIIALNHEDVYMDNERS 206
             K   +++D++ +L ++    +  VLDF+ YCR T+  E+  +++AL H+    ++E +
Sbjct: 139 PWKCPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGNVVALVHDTEGAEDEEN 198

Query: 207 LIL--QMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKVHNFHFYIKET 262
            IL   + + + ++++   LATG  KDVHGQL+++ +         R +   + + I++ 
Sbjct: 199 NILLNGLSHQSHLILRTQGLATGFCKDVHGQLSILWRR-SSQPTAQRARSLTYQYKIQDK 258

[Close]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot
Match: Q0PNE2 (Elongator complex protein 6 OS=Homo sapiens OX=9606 GN=ELP6 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14
Identity = 63/248 (25.40%), Postives = 124/248 (50.00%), Query Frame = 0


Query: 27  GRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNAVVFIAFSHPFPHYDRVLRKLGCNIAA 86
           G+L ++ D+ +T G+F++HH L        ++  V F+A    F HY  V +KLG ++  
Sbjct: 19  GKLTLLCDA-KTDGSFLVHHFLSFYLK---ANCKVCFVALIQSFSHYSIVGQKLGVSLTM 78

Query: 87  QRDSGRFVFFDMLTLGCSD-----------RSGKETDEGVLVGLYCKIQRAVSALIKENK 146
            R+ G+ VF + L                 +  +E + G L  L+  ++ A+  +     
Sbjct: 79  ARERGQLVFLEGLKSAVDVVFQAQKEPHPLQFLREANAGNLKPLFEFVREALKPVDSGEA 138

Query: 147 K--HVTIVIDDIPLLEVAANGSSNHVLDFLHYCR-TLTSEIGCSIIALNHEDVYMDNERS 206
           +  +  +++DD+ +L     G+   VLDF+HYCR T+  E+  +++ L H+    ++E +
Sbjct: 139 RWTYPVLLVDDLSVLLSLGMGAV-AVLDFIHYCRATVCWELKGNMVVLVHDSGDAEDEEN 198

Query: 207 LIL--QMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKVHNFHFYIKET 259
            IL   + + + ++++   LATG  +DVHGQL ++ +       + R++   + + I++ 
Sbjct: 199 DILLNGLSHQSHLILRAEGLATGFCRDVHGQLRILWRRPSQPAVH-RDQSFTYQYKIQDK 258

[Close]

BLAST of Sed0006326 vs. ExPASy TrEMBL
Match: A0A6J1CBS2 (elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 222/260 (85.38%), Postives = 238/260 (91.54%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           MDR + N+LDEA LG DD   P PLIGRLL+VED V+TSGAF+LHHLL+R+ SSP SSNA
Sbjct: 1   MDRMASNMLDEA-LGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+FIAFS  F HYDRVLRKLGCN+ AQRDSGRF+FFDMLTLGCSDRSGKETDEGVLVGLY
Sbjct: 61  VIFIAFSQXFAHYDRVLRKLGCNLVAQRDSGRFIFFDMLTLGCSDRSGKETDEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAV+ALI++NKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYC TLTSEIGCS+IAL
Sbjct: 121 CKIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSLIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           NHEDVYMD ER  ILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPVGGLQDNLRN+V
Sbjct: 181 NHEDVYMDTERPRILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSR 261
            NF FYIKE GTEFFYSGSR
Sbjct: 241 RNFQFYIKENGTEFFYSGSR 259

[Close]

BLAST of Sed0006326 vs. ExPASy TrEMBL
Match: A0A6J1GYT6 (elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458756 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.6e-124
Identity = 221/261 (84.67%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M R + NLLDEA +G DDST+  PL+GRLL+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MSRMTSNLLDEA-IGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+F+AFS  F HYDRVLRKLGCN+AAQRDS RF F DMLT+GCSDRSGKETDEGVLVGLY
Sbjct: 61  VIFVAFSQSFVHYDRVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETDEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAVSALI+ENK+HVTI+IDDIPLLEVAANGSSNHVLDFLHYC TLTSEIGCSIIAL
Sbjct: 121 CKIQRAVSALIQENKRHVTILIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVY+D ER LILQMEYLA++LIKVGPLATGIAKDVHGQLTV+NKPVGGLQ+NLRN+V
Sbjct: 181 SHEDVYLDIERPLILQMEYLAEILIKVGPLATGIAKDVHGQLTVLNKPVGGLQENLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
           HNF FYIKE GTEFFYSGSRA
Sbjct: 241 HNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Sed0006326 vs. ExPASy TrEMBL
Match: A0A6J1JAX8 (elongator complex protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485133 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 8.0e-122
Identity = 221/261 (84.67%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           M R + NLLDEA +G DDST   PL+GRLL+VED V+TSGAFVLHHLL+RAFSSPHSSNA
Sbjct: 1   MSRMTSNLLDEA-IGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+FIAFS  F HY+RVLRKLGCN+AAQRDS RF F DMLT+GCSDRSGKET EGVLVGLY
Sbjct: 61  VIFIAFSQSFVHYERVLRKLGCNLAAQRDSHRFFFLDMLTVGCSDRSGKETGEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAVSALI+ENK+HVTIVIDDIPLLEVAANGSSNHVLDFLHYC TLTSEIG SIIAL
Sbjct: 121 CKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGSSNHVLDFLHYCHTLTSEIGGSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVY+D ER LILQMEYLADVLIKVGPLATGIAKDVHGQLTV+NKPVGGL++NLRN+V
Sbjct: 181 SHEDVYLDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLEENLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
           HNF FYIKE GTEFFYSGSRA
Sbjct: 241 HNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Sed0006326 vs. ExPASy TrEMBL
Match: A0A0A0KLF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.8e-121
Identity = 221/261 (84.67%), Postives = 236/261 (90.42%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           MDR + NLLDEA +GFD   DP PLIGRLL+VED V+TSGAFVLHHLL+RAFSSPHSSN 
Sbjct: 1   MDRMTSNLLDEA-IGFD---DPTPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNV 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+F+AFS  F HYDR+LRKLGCN+AAQRDSGRFVFFDMLTLGCSDRSGKET EGVLVGLY
Sbjct: 61  VIFLAFSQSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAV ALI+ENKKHVTIVIDDI LLEVAANGSSNHVLDFLHYC TL SE+GCSIIAL
Sbjct: 121 CKIQRAVHALIQENKKHVTIVIDDISLLEVAANGSSNHVLDFLHYCHTLLSEVGCSIIAL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVYMD ER L LQ+EYLADVLIKVGPLATGIAKDVHGQLTV+NKPV GLQD LRN+V
Sbjct: 181 DHEDVYMDIERPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
            NF FYIKE GTEFFYSGSRA
Sbjct: 241 QNFQFYIKENGTEFFYSGSRA 257

[Close]

BLAST of Sed0006326 vs. ExPASy TrEMBL
Match: A0A5A7SX52 (Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00250 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120
Identity = 218/261 (83.52%), Postives = 238/261 (91.19%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDSTDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSNA 60
           MDR + NLLD A +GFDD T+P PLIGRLL+VED V+TSGAFVLHHLL+RAFSSP+SSNA
Sbjct: 1   MDRMASNLLDGA-IGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNA 60

Query: 61  VVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120
           V+F+AFS  F HYDR+LRKLGCN+AAQRD+GRFVFFDMLTLGCSDRSGKETDEGVLVGLY
Sbjct: 61  VIFLAFSQSFVHYDRILRKLGCNLAAQRDNGRFVFFDMLTLGCSDRSGKETDEGVLVGLY 120

Query: 121 CKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGSSNHVLDFLHYCRTLTSEIGCSIIAL 180
           CKIQRAV ALI+ENKKHVTIVIDDI LLEVAANGSSN VLDFLHYC TL SE+GCSII+L
Sbjct: 121 CKIQRAVDALIQENKKHVTIVIDDISLLEVAANGSSNLVLDFLHYCHTLLSEVGCSIISL 180

Query: 181 NHEDVYMDNERSLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGLQDNLRNKV 240
           +HEDVYMD +R L LQ+EYLADVLIKVGPLATGIAKDVHGQLTV+NKPV GLQD LRN+V
Sbjct: 181 DHEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVEGLQDKLRNRV 240

Query: 241 HNFHFYIKETGTEFFYSGSRA 262
            NF FYIKE GTEFFYSGSRA
Sbjct: 241 QNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Sed0006326 vs. TAIR 10
Match: AT4G10090.1 (elongator protein 6 )

HSP 1 Score: 269.2 bits (687), Expect = 3.4e-72
Identity = 139/265 (52.45%), Postives = 189/265 (71.32%), Query Frame = 0


Query: 1   MDRKSLNLLDEALLGFDDS-TDPPPLIGRLLVVEDSVQTSGAFVLHHLLRRAFSSPHSSN 60
           MDR SLNLLD A LGFD+    P PL G+++++ED V+TSG+FVLH L++R  SS +SS+
Sbjct: 1   MDR-SLNLLDLA-LGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSD 60

Query: 61  AVVFIAFSHPFPHYDRVLRKLGCNIAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGL 120
           A++F+AF+ PF HYDR+LRKLGCN+A  + + R VFFDML + CSD    E +   +  L
Sbjct: 61  ALIFLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKL 120

Query: 121 YCKIQRAVSALIKENKKHVTIVIDDIPLLEVAANGS-SNHVLDFLHYCRTLTSEIGCSII 180
           + +IQ  V  L      ++T+++DD+ LLE+A  GS S+HVLDFLHYC TL+SE  CS++
Sbjct: 121 FREIQETVRKLQSVTSGNITVMVDDMSLLEIATTGSNSDHVLDFLHYCHTLSSESNCSLV 180

Query: 181 ALNHEDVYMDNER-SLILQMEYLADVLIKVGPLATGIAKDVHGQLTVMNKPVGGL-QDNL 240
            LNHED+Y   ER + +LQM  LADV+IK  PLA+G+A DVHGQLTV+NK +    + + 
Sbjct: 181 ILNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRGSS 240

Query: 241 RNKVHNFHFYIKETGTEFFYSGSRA 262
           RNK+ NF F IKE G ++FY G R+
Sbjct: 241 RNKLQNFQFRIKENGIDYFYPGCRS 262

The following BLAST results are available for this feature:

BLAST of Sed0006326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893352.1	2.5e-125	85.82	elongator complex protein 6 [Benincasa hispida]	[more]
XP_022139240.1	4.7e-124	85.38	elongator complex protein 6 [Momordica charantia]	[more]
XP_023533346.1	1.0e-123	85.82	elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022957322.1	1.4e-123	84.67	elongator complex protein 6 isoform X1 [Cucurbita moschata]	[more]
KAG7031849.1	7.4e-122	82.66	Elongator complex protein 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0006326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9Y2	4.7e-71	52.45	Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1	[more]
Q0IHA2	1.6e-18	27.89	Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1	[more]
Q8BK75	2.6e-16	26.85	Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1	[more]
B2RYG8	1.3e-15	28.17	Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1	[more]
Q0PNE2	2.4e-14	25.40	Elongator complex protein 6 OS=Homo sapiens OX=9606 GN=ELP6 PE=1 SV=1	[more]

BLAST of Sed0006326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS2	2.3e-124	85.38	elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 ...	[more]
A0A6J1GYT6	6.6e-124	84.67	elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JAX8	8.0e-122	84.67	elongator complex protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114851...	[more]
A0A0A0KLF1	6.8e-121	84.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1	[more]
A0A5A7SX52	1.5e-120	83.52	Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Sed0006326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10090.1	3.4e-72	52.45	elongator protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 13..257 e-value: 3.4E-34 score: 120.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 46..189
IPR018627	Elongator complex protein 6	PFAM	PF09807	ELP6	coord: 26..248 e-value: 4.8E-31 score: 108.1
IPR018627	Elongator complex protein 6	PANTHER	PTHR16184	ELONGATOR COMPLEX PROTEIN 6	coord: 1..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006326.1	Sed0006326.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009653	anatomical structure morphogenesis
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0048731	system development
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex