Sed0006317 (gene) Chayote v1

Overview


Name	Sed0006317
Type	gene
Organism	Sechium edule (Chayote v1)
Description	non-classical arabinogalactan protein 31-like
Location	LG10: 1798991 .. 1801620 (-)
RNA-Seq Expression	Sed0006317
Synteny	Sed0006317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAGAAACACAATGATAAAATTGTCATTATACAAAAAAATAAAAGGATAAAAATAAGATCATTGATCATGAACAAAAATAAGGAAAAATCTTTTCCCATAAAATTAAATCATGAAAAGAGCTGCACTGTATTTTCCAGAGCCCGCTATAAATTTTGCCGTAACACTCTGCAAATGTCGTCCCCTACATTTTAGTTCTTAAAATTTCACACTCATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGTAAATTCTCAACTTCCTTTAATTTAAAGCTCTGGATTTAGCTTTTTTTCTTTTTCTTTTTCCTTTTCCTTTTAAACGCTTAACGGAGAATTCTTTTTAACTCTCTTTTGCTATCTTAAAAGAAAGGTAAAACTAAGATCAGTTTCAAACTGAACAATAGAAAGTTTGAACCTTTTTTATTTAGCTAAGGAAGGTTCAAATTCCATTATTTTCTTCTTTACAAAAAAAAAAATCATTATTTTTCATCTTTTTATTAGCCCTCTTTTTTTTTTTATTAATCACAAGATGACAACTTTGGAGCCCAATTTTACATGAAATGATTTTTTTTAGTTCAACAACCCTCATTAATTTGATTAGATGATCTAGAAGTAGTGGACACATAATTACACTGTTGTGTTATTCTGTTGCTTACAATTATTTAGTGCCTTTATGTCTGATTAAATATTAAAAATGAAATCATTATTTAGGGTTTACTATAGTTTAGTATCAAAATTTTCCACCCAATTACATTGTAGCTTGATGGCCAATTAGCTGAATTTTAATTTAGTTTAACATTGTTACTCTCAAGATCGAATTTTAATAAAAAAATTTCTAGTAAAAATGTTATAGACGAAAGTTTAAAAGCCAAATTAGTTGTAAAAAAATGTTTAAAAAATGAACACTATTTCTTACATTGGATAAAGTCGATATGATTAGTTGGATTTGGTTCGGGACAAATAATTGTAGGATGAGCTATTTTAATTGATTAGAATATAAATAATTGAGTTTATAATTATACCAATAGCTCATTGAATACAAATTTATATAAATAATTGTAAATAATAATTTGTTTGAATATAAATTTTTATAAAGTAATTGAAGTCATTAATGAGAGATTAAAAATAAATAGATAAAATTTTAAATTATTTTGAATCATTAAAAATGAATATTAATTTCAAGTGTTAACTCAAGGAGTAATTGTAAATAATAGCTTATCTAAATACAAAGCACAAACATTTCCAAGGATTTACGAAAATTCTATAAAAGTTGTAATGAATAATTGTTTGAAGCTAAAACTTCATCAAAATAAGGTTGGGTTAGAAGAAACCTTTCCATACATACCCTCTCTATCCAAACACAATTTTCAGACAGAAACTTTATAGTCTTTCAAAAAAAAAAAATGATGGCAGAAGGAAAGAGAATATTTTTTAAAAAAATTAAAAATACTAAGCCAAAACACAAGAGAAACAGTAGAAAGTATGGTACAAATTCACCAAAAAAGAAAAAAAGCTGCAAAATATTCAGTAAACATCACATGACATAACAGAGGGGTGTAAATGTAAATTGAAATGGGAAATCATTAATGACAGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAGTTTGTTTTTCCTAAAACGGTGTCGTTCTTGTTTGGACGTTTCTGCCTCTGTACGCCGGTTTGTGGTTGTTGTTGGGTTCGTCAGTTTGGAGTTGTCAGTGCAAAATAATGTTTTTGATTTAATGGTTAGGTTATTTTGTTATTTTTATATATAATTATTGTGTTTCTAGAGTAATTTAAGTCATATTTGGCATGATAAATCTACATACGTTTTTCTTTAATCAAAAATGAAAAAAAAGAATGTGGG

mRNA sequence

AGAAAAAGAAACACAATGATAAAATTGTCATTATACAAAAAAATAAAAGGATAAAAATAAGATCATTGATCATGAACAAAAATAAGGAAAAATCTTTTCCCATAAAATTAAATCATGAAAAGAGCTGCACTGTATTTTCCAGAGCCCGCTATAAATTTTGCCGTAACACTCTGCAAATGTCGTCCCCTACATTTTAGTTCTTAAAATTTCACACTCATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAGTTTGTTTTTCCTAAAACGGTGTCGTTCTTGTTTGGACGTTTCTGCCTCTGTACGCCGGTTTGTGGTTGTTGTTGGGTTCGTCAGTTTGGAGTTGTCAGTGCAAAATAATGTTTTTGATTTAATGGTTAGGTTATTTTGTTATTTTTATATATAATTATTGTGTTTCTAGAGTAATTTAAGTCATATTTGGCATGATAAATCTACATACGTTTTTCTTTAATCAAAAATGAAAAAAAAGAATGTGGG

Coding sequence (CDS)

ATGGATTTCACTCACTCTAAATCCTTCCTTTTCCCTCTCTTCGCCATTTTTGCCGTCGCCGCCGCCGCCGACATCTTCACGGCGGAGGAAACACTCGCCGCTCCTCCCCACCACTACGCCGCCGTGCCACCGGCTCAGCCGCCTGGCCACCACCACCATCACCACCACGCTCCGACTCCGGCACCGGTCGCCCCGCCGACCCACTTACCGGTTCACCCTCCGGTTCAACCGCCGGTCCACCACCACCACCATGTCCACGGCCAGCCGCCGGTTCACCCACCGGCAAATGCACCTTCCCACCACCTCCCGCCAGCTCACTCTCCGGCTCCCGGCCACCACCACCACCACCATGACGCCCGACCGTTGCCGCCGCCGGCTCACTCGCCGGCGCCGTTGTACCCGCCGAAGCCGCGGTTGCTGAGGAGCTTCATTTCGGTTCAAGGGGTTGTTTACTGCAAGTCGTGTAAGTATGCCGGAGTTGACACACTCGTCGGAGCTACTCCCGTCGCCGGCGCGAGCGTGAAGTTGATTTGCCAGAACACGAAAACCCCACTGGTCCAGACCGCAAGCACCGACAAGAACGGCTATTTCTTCATTTCCGCGCCGAAGGCCATAACCAGCTACGCCTTCCACAAGTGCAGGGTCCGGCTCGGCTCCTCCCCCTCCGCCGTCTGCTCCAAACCCTCCGCCCTCCACGGCGGCGCCGCCGGCGCCCCTCTCCGGCCCCAGAAGTCTTACATCGACGCCAACAAGCTCCCCTTTGTTCTCTACTCTGTCGGCCCTTTTGCCTTCGAACCCACTTGCCCTCATCGTCCTTAG

Protein sequence

MDFTHSKSFLFPLFAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPANAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPHRP

Homology

[Close]

BLAST of Sed0006317 vs. NCBI nr
Match: XP_038881349.1 (non-classical arabinogalactan protein 31-like [Benincasa hispida])

HSP 1 Score: 426.8 bits (1096), Expect = 1.4e-115
Identity = 224/279 (80.29%), Postives = 233/279 (83.51%), Query Frame = 0


Query: 1   MDFTHSKSFLFPLFAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPTP 60
           M FT S SF F LF      +AAD  TA ETL  P H YAAVPPA      HHHHHAPTP
Sbjct: 1   MAFTLSSSFFFLLFFAVFAFSAADHITAPETLPVPHHPYAAVPPA------HHHHHAPTP 60

Query: 61  APVAPPTHLPVHPPVQPPV-----HHHHHVHGQPPVHPPANAPSHHL----PPAHSPAPG 120
           APV  PTHLP+H PV PP      HHHHHVHGQPPVHPPANAPSHHL    PPAHSPAPG
Sbjct: 61  APVPSPTHLPIHHPVHPPAQPPSRHHHHHVHGQPPVHPPANAPSHHLPPTHPPAHSPAPG 120

Query: 121 HHHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAG 180
           HH HHHD RPLPPP HSPAP+YPPKPRL+RSFISVQGVVYCKSCKYAG DTL+GATPVAG
Sbjct: 121 HHRHHHDIRPLPPPTHSPAPIYPPKPRLVRSFISVQGVVYCKSCKYAGADTLLGATPVAG 180

Query: 181 ASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSAL 240
           ASVKLICQNTK PLVQTA+TDKNGYFFI+APKAITSYAFHKC+V LGSSPS  C+KPSAL
Sbjct: 181 ASVKLICQNTKYPLVQTATTDKNGYFFITAPKAITSYAFHKCKVILGSSPSPSCAKPSAL 240

Query: 241 HGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           HGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 HGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 273

[Close]

BLAST of Sed0006317 vs. NCBI nr
Match: XP_022926437.1 (non-classical arabinogalactan protein 30-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 426.0 bits (1094), Expect = 2.4e-115
Identity = 228/275 (82.91%), Postives = 238/275 (86.55%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH-HHHHAP 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP HHH HHHHAP
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLATSPHHYAAVPPAQPPAHHHYHHHHAP 60

Query: 61  TPAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPA-NAPSHHLPPAHSPAPGHHHH 120
            PAPV+PPTHLPVHPP QPP   HHHHHVH  PPVHPP  NAPSHHLPP  + APG H H
Sbjct: 61  KPAPVSPPTHLPVHPPAQPPSHNHHHHHVHVHPPVHPPVNNAPSHHLPPTKALAPG-HEH 120

Query: 121 HHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVK 180
           H D RPL PPAHSP+P+YPPKPRLLRSFISVQGVVYCKSCKYAGVDTL GATPVAGASVK
Sbjct: 121 HRDVRPLLPPAHSPSPMYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLNGATPVAGASVK 180

Query: 181 LICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGA 240
           LICQNTK PLVQTA+TD NGYFFI+APKAITSYAFHKC+V LGSSP A CSKPSALHGGA
Sbjct: 181 LICQNTKHPLVQTATTDNNGYFFINAPKAITSYAFHKCKVLLGSSPVAACSKPSALHGGA 240

Query: 241 AGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           AGA L+PQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 AGAALKPQKSYIDANKLPFVLYSVGPFAFEPTCPH 273

[Close]

BLAST of Sed0006317 vs. NCBI nr
Match: KAG6594600.1 (Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.1 bits (1089), Expect = 9.2e-115
Identity = 230/298 (77.18%), Postives = 240/298 (80.54%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH-HHHHAP 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP HHH HHHHAP
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLATSPHHYAAVPPAQPPAHHHYHHHHAP 60

Query: 61  TPAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPA--------------------- 120
            PAPV+PPTHLPVHPP QPP   HHHHHVH QPPVHPP                      
Sbjct: 61  KPAPVSPPTHLPVHPPAQPPSHNHHHHHVHSQPPVHPPVHNAPSHHLPPTHLPVHPPVHP 120

Query: 121 ---NAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYC 180
              NAPSHHLPP  +PAPG H HH D RPL PPAHSP+P+YPPKPRLLRSFISVQGVVYC
Sbjct: 121 PVNNAPSHHLPPTKAPAPG-HEHHRDVRPLLPPAHSPSPMYPPKPRLLRSFISVQGVVYC 180

Query: 181 KSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHK 240
           KSCKYAGVDTL GATPVAGASVKLICQNTK PLVQTA+TD NGYFFI+APKAITSYAFHK
Sbjct: 181 KSCKYAGVDTLNGATPVAGASVKLICQNTKHPLVQTATTDNNGYFFINAPKAITSYAFHK 240

Query: 241 CRVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           C+V LGSSP A CSKPSALHGGAAGA L+PQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 CKVLLGSSPVAACSKPSALHGGAAGAALKPQKSYIDANKLPFVLYSVGPFAFEPTCPH 296

[Close]

BLAST of Sed0006317 vs. NCBI nr
Match: XP_022926436.1 (non-classical arabinogalactan protein 30-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 422.9 bits (1086), Expect = 2.0e-114
Identity = 231/297 (77.78%), Postives = 240/297 (80.81%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH-HHHHAP 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP HHH HHHHAP
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLATSPHHYAAVPPAQPPAHHHYHHHHAP 60

Query: 61  TPAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPA-NAPSHHLPPAHSP------- 120
            PAPV+PPTHLPVHPP QPP   HHHHHVH QPPVHPP  NAPSHHLPP H P       
Sbjct: 61  KPAPVSPPTHLPVHPPAQPPSHNHHHHHVHSQPPVHPPVHNAPSHHLPPTHLPVHPPVHP 120

Query: 121 ----APGH-----------HHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCK 180
               AP H           H HH D RPL PPAHSP+P+YPPKPRLLRSFISVQGVVYCK
Sbjct: 121 PVNNAPSHHLPPTKALAPGHEHHRDVRPLLPPAHSPSPMYPPKPRLLRSFISVQGVVYCK 180

Query: 181 SCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKC 240
           SCKYAGVDTL GATPVAGASVKLICQNTK PLVQTA+TD NGYFFI+APKAITSYAFHKC
Sbjct: 181 SCKYAGVDTLNGATPVAGASVKLICQNTKHPLVQTATTDNNGYFFINAPKAITSYAFHKC 240

Query: 241 RVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           +V LGSSP A CSKPSALHGGAAGA L+PQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 KVLLGSSPVAACSKPSALHGGAAGAALKPQKSYIDANKLPFVLYSVGPFAFEPTCPH 296

[Close]

BLAST of Sed0006317 vs. NCBI nr
Match: XP_023003678.1 (non-classical arabinogalactan protein 31-like [Cucurbita maxima])

HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113
Identity = 227/307 (73.94%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPG--HHHHHHHA 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP   HHHHHHH 
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLAESPHHYAAVPPAQPPAHHHHHHHHHT 60

Query: 61  PTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPA---------------------- 120
           P PAPV+PPTH+PVHPP QPP HHHHH+H QPPVHPP                       
Sbjct: 61  PKPAPVSPPTHVPVHPPAQPPSHHHHHIHSQPPVHPPVHNAPPTHLPVHPPAQPPSHHHN 120

Query: 121 ------------NAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPAPLYPPKPRLLRSF 180
                       NAP HHLPP   PAPG H HH D RPL PPAHSP+P+YPPKPRLLRSF
Sbjct: 121 VHAQPPVHPPVNNAPPHHLPPTKMPAPG-HEHHRDVRPLLPPAHSPSPMYPPKPRLLRSF 180

Query: 181 ISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPK 240
           ISVQGVVYCKSCKYAGVDTL GATPVAGASVKLICQNTK PLVQTA+TDKNGYFFI+APK
Sbjct: 181 ISVQGVVYCKSCKYAGVDTLNGATPVAGASVKLICQNTKYPLVQTATTDKNGYFFINAPK 240

Query: 241 AITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFA 271
           AITSYAFHKC+V LGSSP A CSKPSALHGGAAGA L+PQKSYIDANKLPFVLYSVGPFA
Sbjct: 241 AITSYAFHKCKVLLGSSPVAACSKPSALHGGAAGAALKPQKSYIDANKLPFVLYSVGPFA 300

[Close]

BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.0e-36
Identity = 108/245 (44.08%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 35  PPHHYAAVPPAQPPGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPP 94
           PP      PP +PP       + PT APV PPT  PV PPV PP         +PPV PP
Sbjct: 126 PPTKAPVKPPTKPP--VKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPP 185

Query: 95  ANAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPA------PLYPPKPRLLRSFISVQG 154
            + P+   PP   P      +     P+ PP   P       P+YPPK    RS ++V+G
Sbjct: 186 VSPPAK--PPVKPPV-----YPPTKAPVKPPVSPPTKPPVTPPVYPPK--FNRSLVAVRG 245

Query: 155 VVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSY 214
            VYCKSCKYA  +TL+GA P+ GA+VKL+C++ K    +T +TDKNGYF + APK +T++
Sbjct: 246 TVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITAET-TTDKNGYFLLLAPKTVTNF 305

Query: 215 AFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQ----KSYIDANKLPFVLYSVGPFAF 270
            F  CRV L  S    CSK S L GG  GA L+P+    KS +  NKL + L++VGPFAF
Sbjct: 306 GFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPFAF 358

[Close]

BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-30
Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 0


Query: 48  PGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPANAPSH--HLPPA 107
           PG     H  P   P+ PP  LP  PP + P+        + P +PPA AP     LPPA
Sbjct: 30  PGSSDPFHSLPQHLPL-PPIKLPTLPPAKAPI--------KLPAYPPAKAPIKLPTLPPA 89

Query: 108 HSPAPGHHHHHHDARPLPPPAHSPA--PLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTL 167
            +P            P  PP   P   P+YPPK    ++ ++V+GVVYCK+CKYAGV+ +
Sbjct: 90  KAPI---------KLPTLPPIKPPVLPPVYPPKYN--KTLVAVRGVVYCKACKYAGVNNV 149

Query: 168 VGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSA 227
            GA PV  A V+L+C+N K  + +T  TDKNGYF + APK +T+Y    CR  L  SP  
Sbjct: 150 QGAKPVKDAVVRLVCKNKKNSISET-KTDKNGYFMLLAPKTVTNYDIKGCRAFLVKSPDT 209

Query: 228 VCSKPSALHGGAAGAPLRPQK----SYIDANKLPFVLYSVGPFAFEPTCP 270
            CSK S+LH G  G+ L+P      S        + +Y+VGPFAFEPTCP
Sbjct: 210 KCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGPFAFEPTCP 238

[Close]

BLAST of Sed0006317 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-15
Identity = 96/263 (36.50%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 27  TAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPTPAPVAPPTHLP-VHPPVQPPVHHHHHV 86
           +A++    PP    + PP  PP        A  P P  PP   P   P  QPP       
Sbjct: 164 SAKQPPQPPPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTK----- 223

Query: 87  HGQPPVHPPAN-------APSHHLPPAHSPAPGHHHHHHDARPLP-PPAHSP-------A 146
             QPP  P A         P    PP  +P+P          P P PPA+ P        
Sbjct: 224 --QPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAP 283

Query: 147 PLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTAS 206
           P+  P P L +  I V G+VYCKSC   GV TL+ A+ + GA VKLIC   KT +VQ A+
Sbjct: 284 PVVKPLPPLGKPPI-VSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKT-MVQWAT 343

Query: 207 TDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGA---PLRPQKSYI 266
           TD  G F I  PK++T+    KC+V L  SP+  C+ P+  +GG +G    PL P K  I
Sbjct: 344 TDNKGEFRI-MPKSLTTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPI 403

[Close]

BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEG4 (non-classical arabinogalactan protein 30-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433591 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-115
Identity = 228/275 (82.91%), Postives = 238/275 (86.55%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH-HHHHAP 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP HHH HHHHAP
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLATSPHHYAAVPPAQPPAHHHYHHHHAP 60

Query: 61  TPAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPA-NAPSHHLPPAHSPAPGHHHH 120
            PAPV+PPTHLPVHPP QPP   HHHHHVH  PPVHPP  NAPSHHLPP  + APG H H
Sbjct: 61  KPAPVSPPTHLPVHPPAQPPSHNHHHHHVHVHPPVHPPVNNAPSHHLPPTKALAPG-HEH 120

Query: 121 HHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVK 180
           H D RPL PPAHSP+P+YPPKPRLLRSFISVQGVVYCKSCKYAGVDTL GATPVAGASVK
Sbjct: 121 HRDVRPLLPPAHSPSPMYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLNGATPVAGASVK 180

Query: 181 LICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGA 240
           LICQNTK PLVQTA+TD NGYFFI+APKAITSYAFHKC+V LGSSP A CSKPSALHGGA
Sbjct: 181 LICQNTKHPLVQTATTDNNGYFFINAPKAITSYAFHKCKVLLGSSPVAACSKPSALHGGA 240

Query: 241 AGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           AGA L+PQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 AGAALKPQKSYIDANKLPFVLYSVGPFAFEPTCPH 273

[Close]

BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEX2 (non-classical arabinogalactan protein 30-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433591 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.9e-115
Identity = 231/297 (77.78%), Postives = 240/297 (80.81%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH-HHHHAP 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP HHH HHHHAP
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLATSPHHYAAVPPAQPPAHHHYHHHHAP 60

Query: 61  TPAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPA-NAPSHHLPPAHSP------- 120
            PAPV+PPTHLPVHPP QPP   HHHHHVH QPPVHPP  NAPSHHLPP H P       
Sbjct: 61  KPAPVSPPTHLPVHPPAQPPSHNHHHHHVHSQPPVHPPVHNAPSHHLPPTHLPVHPPVHP 120

Query: 121 ----APGH-----------HHHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCK 180
               AP H           H HH D RPL PPAHSP+P+YPPKPRLLRSFISVQGVVYCK
Sbjct: 121 PVNNAPSHHLPPTKALAPGHEHHRDVRPLLPPAHSPSPMYPPKPRLLRSFISVQGVVYCK 180

Query: 181 SCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKC 240
           SCKYAGVDTL GATPVAGASVKLICQNTK PLVQTA+TD NGYFFI+APKAITSYAFHKC
Sbjct: 181 SCKYAGVDTLNGATPVAGASVKLICQNTKHPLVQTATTDNNGYFFINAPKAITSYAFHKC 240

Query: 241 RVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           +V LGSSP A CSKPSALHGGAAGA L+PQKSYIDANKLPFVLYSVGPFAFEPTCPH
Sbjct: 241 KVLLGSSPVAACSKPSALHGGAAGAALKPQKSYIDANKLPFVLYSVGPFAFEPTCPH 296

[Close]

BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1KXA6 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111497200 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.9e-114
Identity = 227/307 (73.94%), Postives = 238/307 (77.52%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPG--HHHHHHHA 60
           MDF  SKSF F L FAIFAV+ A D+ TA ETLA  PHHYAAVPPAQPP   HHHHHHH 
Sbjct: 1   MDFALSKSFFFLLSFAIFAVSTAEDV-TAAETLAESPHHYAAVPPAQPPAHHHHHHHHHT 60

Query: 61  PTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPA---------------------- 120
           P PAPV+PPTH+PVHPP QPP HHHHH+H QPPVHPP                       
Sbjct: 61  PKPAPVSPPTHVPVHPPAQPPSHHHHHIHSQPPVHPPVHNAPPTHLPVHPPAQPPSHHHN 120

Query: 121 ------------NAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPAPLYPPKPRLLRSF 180
                       NAP HHLPP   PAPG H HH D RPL PPAHSP+P+YPPKPRLLRSF
Sbjct: 121 VHAQPPVHPPVNNAPPHHLPPTKMPAPG-HEHHRDVRPLLPPAHSPSPMYPPKPRLLRSF 180

Query: 181 ISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPK 240
           ISVQGVVYCKSCKYAGVDTL GATPVAGASVKLICQNTK PLVQTA+TDKNGYFFI+APK
Sbjct: 181 ISVQGVVYCKSCKYAGVDTLNGATPVAGASVKLICQNTKYPLVQTATTDKNGYFFINAPK 240

Query: 241 AITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQKSYIDANKLPFVLYSVGPFA 271
           AITSYAFHKC+V LGSSP A CSKPSALHGGAAGA L+PQKSYIDANKLPFVLYSVGPFA
Sbjct: 241 AITSYAFHKCKVLLGSSPVAACSKPSALHGGAAGAALKPQKSYIDANKLPFVLYSVGPFA 300

[Close]

BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1EEB1 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111433343 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.1e-113
Identity = 221/273 (80.95%), Postives = 236/273 (86.45%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPT 60
           M  T  KSF F L FAIFAV+ A D  TA ETLAAPPHHYAAVPPA     HHHHHH+PT
Sbjct: 1   MASTLFKSFFFLLFFAIFAVSTADDT-TAAETLAAPPHHYAAVPPA-----HHHHHHSPT 60

Query: 61  PAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPANAPSHHLPPAHSPAPGHHHHHH 120
           PAPVAPPTHLP+HPP QPP   HHHHH+H QPPVHP    P +HLPPAH+PAPG HHHHH
Sbjct: 61  PAPVAPPTHLPLHPPAQPPSHHHHHHHIHSQPPVHP----PHYHLPPAHAPAPG-HHHHH 120

Query: 121 DARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLI 180
           D  PLPPP HSPAPL+PPKPRLLRSFISVQGVVYCKSCKYAGVDTL+GAT VAGA+VKLI
Sbjct: 121 DVHPLPPPTHSPAPLHPPKPRLLRSFISVQGVVYCKSCKYAGVDTLLGATTVAGATVKLI 180

Query: 181 CQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAG 240
           CQNTK PLVQTA+TDKNGYFFI+APKA+TSYAFHKC+V LGSSP+  CSKPSALHGGAAG
Sbjct: 181 CQNTKYPLVQTATTDKNGYFFITAPKAVTSYAFHKCKVVLGSSPTPSCSKPSALHGGAAG 240

Query: 241 APLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           APLRPQKSYIDANKLP+VLYSVGPFAFEPTC H
Sbjct: 241 APLRPQKSYIDANKLPYVLYSVGPFAFEPTCAH 262

[Close]

BLAST of Sed0006317 vs. ExPASy TrEMBL
Match: A0A6J1IR37 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111478609 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.6e-109
Identity = 218/277 (78.70%), Postives = 231/277 (83.39%), Query Frame = 0


Query: 1   MDFTHSKSFLFPL-FAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHHHHHHAPT 60
           M  T  KSF F L FAIF     AD  TA ETLAAPPHHYAAVPP      HHHHHH+PT
Sbjct: 1   MASTLFKSFFFLLFFAIF-----ADDTTAAETLAAPPHHYAAVPPT-----HHHHHHSPT 60

Query: 61  PAPVAPPTHLPVHPPVQPPV--HHHHHVHGQPPVHPPANAPSHHL----PPAHSPAPGHH 120
           PAPVAPPTHLP+HPP QPP   HHHHH+H QPPVHP    P HHL    PP H+PAPG H
Sbjct: 61  PAPVAPPTHLPLHPPAQPPSHHHHHHHIHTQPPVHP----PHHHLPPTHPPVHAPAPG-H 120

Query: 121 HHHHDARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGAS 180
           HHHHD  PLPPP HSPAPL+PPKPRLLRSFISVQGVVYCKSCKYAGVDTL+GAT VAGA+
Sbjct: 121 HHHHDVHPLPPPTHSPAPLHPPKPRLLRSFISVQGVVYCKSCKYAGVDTLLGATTVAGAT 180

Query: 181 VKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSAVCSKPSALHG 240
           VKLICQNTK PLVQTA+TDKNGYFFI+APKA+TSYAFHKC+V LGSSP+  CSKPSALHG
Sbjct: 181 VKLICQNTKYPLVQTATTDKNGYFFITAPKAVTSYAFHKCKVVLGSSPTPSCSKPSALHG 240

Query: 241 GAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPTCPH 271
           GAAGAPLRPQKSYIDANKLP+VLYSVGPFAFEPTC H
Sbjct: 241 GAAGAPLRPQKSYIDANKLPYVLYSVGPFAFEPTCAH 262

[Close]

BLAST of Sed0006317 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-37
Identity = 108/245 (44.08%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 35  PPHHYAAVPPAQPPGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPP 94
           PP      PP +PP       + PT APV PPT  PV PPV PP         +PPV PP
Sbjct: 126 PPTKAPVKPPTKPP--VKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPP 185

Query: 95  ANAPSHHLPPAHSPAPGHHHHHHDARPLPPPAHSPA------PLYPPKPRLLRSFISVQG 154
            + P+   PP   P      +     P+ PP   P       P+YPPK    RS ++V+G
Sbjct: 186 VSPPAK--PPVKPPV-----YPPTKAPVKPPVSPPTKPPVTPPVYPPK--FNRSLVAVRG 245

Query: 155 VVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSY 214
            VYCKSCKYA  +TL+GA P+ GA+VKL+C++ K    +T +TDKNGYF + APK +T++
Sbjct: 246 TVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITAET-TTDKNGYFLLLAPKTVTNF 305

Query: 215 AFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQ----KSYIDANKLPFVLYSVGPFAF 270
            F  CRV L  S    CSK S L GG  GA L+P+    KS +  NKL + L++VGPFAF
Sbjct: 306 GFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPFAF 358

[Close]

BLAST of Sed0006317 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-35
Identity = 118/313 (37.70%), Postives = 155/313 (49.52%), Query Frame = 0


Query: 7   KSFLFPLFAIFAVAAAADIFTAEETLAAPPHHYAAVPPAQPPGHHH----HHHH------ 66
           KS L  L A++   ++  +FT E          A  P     GHHH    HHHH      
Sbjct: 6   KSVLVSLVALWCFTSS--VFTEEVNHKTQTPSLAPAPAPYHHGHHHPHPPHHHHPHPHPH 65

Query: 67  ----------APTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPANAPSHH--LPP 126
                      P  APV+PP   PV PPV PP         +PPV PP + P+     PP
Sbjct: 66  PHPPAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPP 125

Query: 127 AHSPAPGHHHHHHDARPLPPPAHSPA--PLYPP----------------------KPRLL 186
            + P            P+ PP + P   P+YPP                       P+  
Sbjct: 126 VYPPTKA-PVKPPTKPPVKPPVYPPTKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPPKFN 185

Query: 187 RSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFIS 246
           RS ++V+G VYCKSCKYA  +TL+GA P+ GA+VKL+C++ K    +T +TDKNGYF + 
Sbjct: 186 RSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITAET-TTDKNGYFLLL 245

Query: 247 APKAITSYAFHKCRVRLGSSPSAVCSKPSALHGGAAGAPLRPQ----KSYIDANKLPFVL 270
           APK +T++ F  CRV L  S    CSK S L GG  GA L+P+    KS +  NKL + L
Sbjct: 246 APKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKLVYGL 305

[Close]

BLAST of Sed0006317 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34
Identity = 72/147 (48.98%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 128 SPAPLYPPK--PRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLICQNTKTPL 187
           S +P+ PP    ++ R  ++V+G+VYCKSCKY+GVDTL+ A+P+ GA+VKL C NTK  +
Sbjct: 28  SASPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQGATVKLACNNTKRGV 87

Query: 188 VQTASTDKNGYFFISAPKAITSYAFHKCRV----RLGSSPSAVCSKPSALHGGAAGAPLR 247
                TDKNGYFF+ APK +T+YAFH CR        ++ +  C+ PS L+ G  GA L+
Sbjct: 88  TMETKTDKNGYFFMLAPKKLTTYAFHTCRAWPTNPGPTTATMTCTVPSKLNNGITGAMLK 147

Query: 248 PQKSYIDANKLPFVLYSVGPFAFEPTC 269
           P K+ I+  +  +VL+SVGPFAFEP C
Sbjct: 148 PSKT-INIGEHDYVLFSVGPFAFEPAC 173

[Close]

BLAST of Sed0006317 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 132.9 bits (333), Expect = 3.9e-31
Identity = 96/230 (41.74%), Postives = 125/230 (54.35%), Query Frame = 0


Query: 48  PGHHHHHHHAPTPAPVAPPTHLPVHPPVQPPVHHHHHVHGQPPVHPPANAPSH--HLPPA 107
           PG     H  P   P+ PP  LP  PP + P+        + P +PPA AP     LPPA
Sbjct: 30  PGSSDPFHSLPQHLPL-PPIKLPTLPPAKAPI--------KLPAYPPAKAPIKLPTLPPA 89

Query: 108 HSPAPGHHHHHHDARPLPPPAHSPA--PLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTL 167
            +P            P  PP   P   P+YPPK    ++ ++V+GVVYCK+CKYAGV+ +
Sbjct: 90  KAPI---------KLPTLPPIKPPVLPPVYPPKYN--KTLVAVRGVVYCKACKYAGVNNV 149

Query: 168 VGATPVAGASVKLICQNTKTPLVQTASTDKNGYFFISAPKAITSYAFHKCRVRLGSSPSA 227
            GA PV  A V+L+C+N K  + +T  TDKNGYF + APK +T+Y    CR  L  SP  
Sbjct: 150 QGAKPVKDAVVRLVCKNKKNSISET-KTDKNGYFMLLAPKTVTNYDIKGCRAFLVKSPDT 209

Query: 228 VCSKPSALHGGAAGAPLRPQK----SYIDANKLPFVLYSVGPFAFEPTCP 270
            CSK S+LH G  G+ L+P      S        + +Y+VGPFAFEPTCP
Sbjct: 210 KCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGPFAFEPTCP 238

[Close]

BLAST of Sed0006317 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 119 ARPLPPPAHSPAPLYPPKPRLLRSFISVQGVVYCKSCKYAGVDTLVGATPVAGASVKLIC 178
           A    PP   P   YP    +     +V+G+VYC+SC   G  +L GA  +AGA + +IC
Sbjct: 21  ANAYTPPPPPPTTAYPAVKTV---EAAVEGMVYCQSCDKFGSWSLAGAEAIAGAKISIIC 80

Query: 179 QN--TKTPLVQTASTDKNGYFF-----ISAPKAITSYAFHKCRVRLGSSPSAVCSKPSAL 238
           +N   +    +   TD  G+F+              +  H CR +L SSP   C+  S +
Sbjct: 81  KNHRQQVSFYKVFRTDSYGHFYGELKGFKMTPHFLDHPLHSCRAKLVSSPREDCNLFSNI 140

Query: 239 HGGAAGAPLRPQKSYIDANKLPFVLYSVGPFAFEPT-CP 270
           +    GAPLR ++  +       V+Y+ GP AF P  CP
Sbjct: 141 NNALDGAPLRYEEKRLKWTNYEAVIYAAGPLAFRPDHCP 176

The following BLAST results are available for this feature:

BLAST of Sed0006317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881349.1	1.4e-115	80.29	non-classical arabinogalactan protein 31-like [Benincasa hispida]	[more]
XP_022926437.1	2.4e-115	82.91	non-classical arabinogalactan protein 30-like isoform X2 [Cucurbita moschata]	[more]
KAG6594600.1	9.2e-115	77.18	Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp....	[more]
XP_022926436.1	2.0e-114	77.78	non-classical arabinogalactan protein 30-like isoform X1 [Cucurbita moschata]	[more]
XP_023003678.1	1.0e-113	73.94	non-classical arabinogalactan protein 31-like [Cucurbita maxima]	[more]

BLAST of Sed0006317 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZA2	3.0e-36	44.08	Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
P93013	5.5e-30	41.74	Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
Q03211	8.6e-15	36.50	Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Sed0006317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEG4	1.2e-115	82.91	non-classical arabinogalactan protein 30-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1EEX2	9.9e-115	77.78	non-classical arabinogalactan protein 30-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1KXA6	4.9e-114	73.94	non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EEB1	7.1e-113	80.95	non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IR37	3.6e-109	78.70	non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Sed0006317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28290.1	2.2e-37	44.08	arabinogalactan protein 31	[more]
AT1G28290.2	2.0e-35	37.70	arabinogalactan protein 31	[more]
AT2G34700.1	2.2e-34	48.98	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G33790.1	3.9e-31	41.74	arabinogalactan protein 30	[more]
AT5G05500.1	7.5e-14	31.45	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 146..237 e-value: 4.7E-24 score: 84.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	PANTHER	PTHR33470:SF22	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 4..268
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 4..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006317.1	Sed0006317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071944	cell periphery