Homology
BLAST of Sed0006316 vs. NCBI nr
Match:
XP_023537007.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537008.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537009.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537010.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 581/635 (91.50%), Postives = 607/635 (95.59%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPLEIDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKD+FHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDRFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YDSSDAL
Sbjct: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYF ID V PGDYNLY+WVPGFIGDYRYD +INI
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFLIDHVRPGDYNLYAWVPGFIGDYRYDSIINI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
T + SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY
Sbjct: 421 T-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TY+LRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYQLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. NCBI nr
Match:
XP_023001855.1 (rhamnogalacturonate lyase B-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 577/635 (90.87%), Postives = 605/635 (95.28%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I+E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPLEIDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPT+LAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YD SDA
Sbjct: 241 GPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDFSDAF 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYFFID V PGDYNLY+WVPGFIGDYRYD +INI
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFIGDYRYDSIINI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY
Sbjct: 421 I-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLRVALASAS+ ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. NCBI nr
Match:
KAG7020263.1 (rhiE [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 578/635 (91.02%), Postives = 605/635 (95.28%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPL IDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YDSSDAL
Sbjct: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISG+LLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGKLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYFFID V PGDYNLY+WVPGFIGDYRY+ +INI
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFIGDYRYNSIINI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY
Sbjct: 421 L-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLRVALASAS+AELQV VNDPKAKPVFSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYKLRVALASASIAELQVVVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. NCBI nr
Match:
XP_022951036.1 (probable rhamnogalacturonate lyase B isoform X2 [Cucurbita moschata])
HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 577/635 (90.87%), Postives = 604/635 (95.12%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPL IDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YDSSDAL
Sbjct: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYFFID + PGDYNLY+WVPGFIGDYRYD +I+I
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ SQIDV +IIYEPPRAG TLWEIGVPDRSA EFYVPDPNPNYVNKLYLNH DKFRQY
Sbjct: 421 L-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLRVALASAS+AELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. NCBI nr
Match:
XP_023001852.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucurbita maxima] >XP_023001853.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita maxima] >XP_023001854.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita maxima])
HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 577/646 (89.32%), Postives = 605/646 (93.65%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRG----- 60
MPPLGVQL I+E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRG
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE 60
Query: 61 ------YWDLVWSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLE 120
YWDLVW+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPLE
Sbjct: 61 KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLE 120
Query: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPL 180
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPL
Sbjct: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
Query: 181 PDDRSLPRGRALAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFW 240
PDDRS PRGRALAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFW
Sbjct: 181 PDDRSPPRGRALAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
Query: 241 LITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIY 300
LITPSNE RSGGPVKQNLTSHVGPT+LAVFISAHY GEDLVPKIGAGE WKKVFGPVFIY
Sbjct: 241 LITPSNECRSGGPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
Query: 301 LNSSYDSSDALQLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSE 360
LNS+YD SDA QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSE
Sbjct: 301 LNSTYDFSDAFQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
Query: 361 DYIPANGAFVGLASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFI 420
DYIPANGAFVGLA PGDVGSWQRESKGYQFWSRADE GYFFID V PGDYNLY+WVPGFI
Sbjct: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFI 420
Query: 421 GDYRYDDLINITDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKL 480
GDYRYD +INI + SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKL
Sbjct: 421 GDYRYDSIINII-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKL 480
Query: 481 YLNHPDKFRQYGLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQV 540
YLNHPDKFRQYGLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQV
Sbjct: 481 YLNHPDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQV 540
Query: 541 KFKLDNVDNNATYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLH 600
KF+LDNVD+ ATYKLRVALASAS+ ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGL+
Sbjct: 541 KFELDNVDSQATYKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLY 600
Query: 601 WHYNIDIPGNRLFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
W YN++IPGNRL +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 WLYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 645
BLAST of Sed0006316 vs. ExPASy Swiss-Prot
Match:
Q5B5P1 (Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglC PE=3 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 2.4e-15
Identity = 131/584 (22.43%), Postives = 222/584 (38.01%), Query Frame = 0
Query: 16 TMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRG-YWDLVWSPSASTTGSFD-- 75
T+ N V ++ +G V+ +G D LL L+ S +G Y D +P T +
Sbjct: 33 TISNSRFSVAVAKSNGHVVDANLDGQD-LLGPLSGNSGKGPYLDCSCTPEGFWTPGAEPA 92
Query: 76 VIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRG-SSGFYSYAIYQH 135
++ TD V + T ++ + + +++ LRG +G ++++ +
Sbjct: 93 LVNGTD----STGTPYVGVIMTDTYETTNQTL-------SQYLFLRGEETGLHAFSRVTY 152
Query: 136 LKEWPGF--NLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRALAYPEAVLL 195
E F LGE R F+ + + + + ++ MPL + A Y L
Sbjct: 153 YNESDYFLRGLGELRTLFRPNTNLWTHFSGSEGNYGPMPLSSTEKITVQDATTY-----L 212
Query: 196 VDPVEPELRGEVDD---KYQYSCDNKDSGVHGWISSDP------PVGFWLITPSNEFRSG 255
D + + D KY + +D VHG S+ G WL+ + E G
Sbjct: 213 GDTTDDPYVSQYSDYFTKYTLTESWRDHDVHGHFSNGSTSGDGNTYGAWLVHNTRETYYG 272
Query: 256 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 315
GP+ +L V +S HY + P + G + + FGP + + NS +
Sbjct: 273 GPLHADLV--VDGIVYNYIVSGHYGAPN--PNLTHG--FDRTFGPQYYHFNSGGPGTTLE 332
Query: 316 QLWEDAKAQATIEVQSWPYSFPASE--DFLKPNQRGNISGRLLVKDSYVSEDYIPANGAF 375
+L DA A+ E + Y A +++ R G++ + + +
Sbjct: 333 ELRADAAQYASPEWNAEFYDSIAKHIPNYVPSTGRTTFRGKVNLPKGAKKPIIVLSEN-- 392
Query: 376 VGLASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLI 435
+ ++++S Q+W+ D SG F I V+ G Y + + G + D++
Sbjct: 393 ---EQDFQLNVFKKDS--LQYWAEIDGSGAFTIPRVVKGTYRVTIYADEIFGWFIKDNVK 452
Query: 436 NITDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEF---YVPDPNPNYVNKLYLNHPD 495
I + ++ AG +W IGVPD+S+ EF Y PD + P+
Sbjct: 453 VIGS-----NAHTFTWKEETAGKEIWRIGVPDKSSGEFLHGYAPDTSKPL-------QPE 512
Query: 496 KFRQYGLWERYSELYPD---ADLVYTVGVNDYTKD-----W-FFAQVTRKTENGTF--KG 555
++R Y W +Y YP + Y VG +D KD W FF N +
Sbjct: 513 QYRIY--WGKYD--YPSDFPEGVNYHVGKSDPAKDLNYIHWSFFPSQGNHLRNEPYYQNV 570
Query: 556 TTWQVKFKL--DNVDNNATYKLRVALASASLAELQVGVNDPKAK 567
W + F L + N T V LA A N AK
Sbjct: 573 NNWTITFDLTASQLRNTKTATFTVQLAGTRNANGNSKWNPDPAK 570
BLAST of Sed0006316 vs. ExPASy TrEMBL
Match:
A0A6J1KMB3 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV=1)
HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 577/635 (90.87%), Postives = 605/635 (95.28%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I+E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPLEIDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPT+LAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YD SDA
Sbjct: 241 GPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDFSDAF 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYFFID V PGDYNLY+WVPGFIGDYRYD +INI
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFIGDYRYDSIINI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY
Sbjct: 421 I-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLRVALASAS+ ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. ExPASy TrEMBL
Match:
A0A6J1GGG5 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 SV=1)
HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 577/635 (90.87%), Postives = 604/635 (95.12%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL I E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRGYWDLV
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYWDLV 60
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
W+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPL IDKRFIMLRGS
Sbjct: 61 WNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLLIDKRFIMLRGS 120
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 121 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 180
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFWLITPSNE RSG
Sbjct: 181 LAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFWLITPSNECRSG 240
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YDSSDAL
Sbjct: 241 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAL 300
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSEDYIPANGAFVG
Sbjct: 301 QLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADE GYFFID + PGDYNLY+WVPGFIGDYRYD +I+I
Sbjct: 361 LAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFIGDYRYDSIIDI 420
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ SQIDV +IIYEPPRAG TLWEIGVPDRSA EFYVPDPNPNYVNKLYLNH DKFRQY
Sbjct: 421 L-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLYLNHSDKFRQY 480
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQVKF+LDNVD+ A
Sbjct: 481 GLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFELDNVDSQA 540
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLRVALASAS+AELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGL+W YN++IPGNR
Sbjct: 541 TYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYWLYNVNIPGNR 600
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 LVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 634
BLAST of Sed0006316 vs. ExPASy TrEMBL
Match:
A0A6J1KHT0 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV=1)
HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 577/646 (89.32%), Postives = 605/646 (93.65%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRG----- 60
MPPLGVQL I+E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRG
Sbjct: 1 MPPLGVQLSISEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE 60
Query: 61 ------YWDLVWSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLE 120
YWDLVW+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPLE
Sbjct: 61 KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLE 120
Query: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPL 180
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPL
Sbjct: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
Query: 181 PDDRSLPRGRALAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFW 240
PDDRS PRGRALAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFW
Sbjct: 181 PDDRSPPRGRALAYPEAVLLVDPIESELQGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
Query: 241 LITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIY 300
LITPSNE RSGGPVKQNLTSHVGPT+LAVFISAHY GEDLVPKIGAGE WKKVFGPVFIY
Sbjct: 241 LITPSNECRSGGPVKQNLTSHVGPTSLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
Query: 301 LNSSYDSSDALQLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSE 360
LNS+YD SDA QLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSE
Sbjct: 301 LNSTYDFSDAFQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
Query: 361 DYIPANGAFVGLASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFI 420
DYIPANGAFVGLA PGDVGSWQRESKGYQFWSRADE GYFFID V PGDYNLY+WVPGFI
Sbjct: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHVRPGDYNLYAWVPGFI 420
Query: 421 GDYRYDDLINITDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKL 480
GDYRYD +INI + SQIDV +IIYEPPRAG TLWEIGVPDRSAAEFYVPDPNPNYVNKL
Sbjct: 421 GDYRYDSIINII-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAAEFYVPDPNPNYVNKL 480
Query: 481 YLNHPDKFRQYGLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQV 540
YLNHPDKFRQYGLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQV
Sbjct: 481 YLNHPDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQV 540
Query: 541 KFKLDNVDNNATYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLH 600
KF+LDNVD+ ATYKLRVALASAS+ ELQVGVNDPKAKP+FSSGLIGRDNSIARHGIHGL+
Sbjct: 541 KFELDNVDSQATYKLRVALASASIVELQVGVNDPKAKPLFSSGLIGRDNSIARHGIHGLY 600
Query: 601 WHYNIDIPGNRLFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
W YN++IPGNRL +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 WLYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 645
BLAST of Sed0006316 vs. ExPASy TrEMBL
Match:
A0A6J1BSU2 (Rhamnogalacturonan endolyase OS=Momordica charantia OX=3673 GN=LOC111005034 PE=3 SV=1)
HSP 1 Score: 1209.5 bits (3128), Expect = 0.0e+00
Identity = 569/635 (89.61%), Postives = 598/635 (94.17%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLV 60
MPPLGVQL++TERQV M NGIVQVT SNPDG+VIGIRYNG+DNLLE+LNDE NRGYWDLV
Sbjct: 76 MPPLGVQLYVTERQVVMDNGIVQVTFSNPDGIVIGIRYNGVDNLLEILNDEYNRGYWDLV 135
Query: 61 WSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGS 120
WSPSASTTGSFDVIKAT FEVIVENEDQVELSFTRKWDLSLEGK+VPLEIDKRF+MLRGS
Sbjct: 136 WSPSASTTGSFDVIKATSFEVIVENEDQVELSFTRKWDLSLEGKLVPLEIDKRFVMLRGS 195
Query: 121 SGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRA 180
SGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPLPDDRS PRGRA
Sbjct: 196 SGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSPPRGRA 255
Query: 181 LAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSG 240
LAYPEAVLLVDPVEPEL+GEVDDKYQYSCDNKDS VHGWIS+DPPVGFWLITPSNEFRSG
Sbjct: 256 LAYPEAVLLVDPVEPELQGEVDDKYQYSCDNKDSSVHGWISTDPPVGFWLITPSNEFRSG 315
Query: 241 GPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDAL 300
GPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIYLNS+YDSSDA+
Sbjct: 316 GPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIYLNSTYDSSDAI 375
Query: 301 QLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVG 360
QLWEDAKAQ TIEVQSWPYSFPAS+DF K NQRGNI GRLLVKD YVSED+IPANGAFVG
Sbjct: 376 QLWEDAKAQETIEVQSWPYSFPASDDFPKSNQRGNIGGRLLVKDRYVSEDFIPANGAFVG 435
Query: 361 LASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINI 420
LA PGDVGSWQRESKGYQFWSRADESGYF I+GV GDYNLY+WVPGFIGDYR D LINI
Sbjct: 436 LAPPGDVGSWQRESKGYQFWSRADESGYFSINGVRTGDYNLYAWVPGFIGDYRNDSLINI 495
Query: 421 TDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQY 480
+ + S+IDVGDIIYE PR G T+WEIG+PDRSAAEFYVPDPNP YVNKLYLNHPDKFRQY
Sbjct: 496 S-EGSEIDVGDIIYEAPREGATMWEIGIPDRSAAEFYVPDPNPGYVNKLYLNHPDKFRQY 555
Query: 481 GLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNA 540
GLWERY+ELYPDADLVYT+GV+DYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVD
Sbjct: 556 GLWERYTELYPDADLVYTIGVSDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDRKG 615
Query: 541 TYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNR 600
TYKLR+ALASASLAELQV VNDPK+KP FSSGLIGRDNSIARHGIHGLHW YN+DIP NR
Sbjct: 616 TYKLRIALASASLAELQVAVNDPKSKPAFSSGLIGRDNSIARHGIHGLHWLYNVDIPANR 675
Query: 601 LFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
L GDN IFFTQPRST PFQA+MYDYIRLE+PPPP
Sbjct: 676 LVAGDNVIFFTQPRSTSPFQAIMYDYIRLESPPPP 709
BLAST of Sed0006316 vs. ExPASy TrEMBL
Match:
A0A6J1GGK0 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 SV=1)
HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 577/646 (89.32%), Postives = 604/646 (93.50%), Query Frame = 0
Query: 1 MPPLGVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRG----- 60
MPPLGVQL I E QVTM NGIVQVTLSNPDG+V GIRYNG+DNLLEVLNDESNRG
Sbjct: 1 MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE 60
Query: 61 ------YWDLVWSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLE 120
YWDLVW+PSAS TGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGK+VPL
Sbjct: 61 KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL 120
Query: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPL 180
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGE+RLAFKLRKDKFHYMAMADNRQRSMPL
Sbjct: 121 IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL 180
Query: 181 PDDRSLPRGRALAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFW 240
PDDRS PRGRALAYPEAVLLVDP+E EL+GEVDDKYQYSCDNKDSGVHGWIS+DPP+GFW
Sbjct: 181 PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW 240
Query: 241 LITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIY 300
LITPSNE RSGGPVKQNLTSHVGPTTLAVFISAHY GEDLVPKIGAGE WKKVFGPVFIY
Sbjct: 241 LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY 300
Query: 301 LNSSYDSSDALQLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSE 360
LNS+YDSSDALQLWED K+QA+IEVQSWPYSFPASEDF K NQRGNISGRLLVKDSYVSE
Sbjct: 301 LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE 360
Query: 361 DYIPANGAFVGLASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFI 420
DYIPANGAFVGLA PGDVGSWQRESKGYQFWSRADE GYFFID + PGDYNLY+WVPGFI
Sbjct: 361 DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI 420
Query: 421 GDYRYDDLINITDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKL 480
GDYRYD +I+I + SQIDV +IIYEPPRAG TLWEIGVPDRSA EFYVPDPNPNYVNKL
Sbjct: 421 GDYRYDSIIDIL-EGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKL 480
Query: 481 YLNHPDKFRQYGLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQV 540
YLNH DKFRQYGLWERYSELYPDADLVYTVGV+DYTKDWFFAQVTRKTENGTFKGTTWQV
Sbjct: 481 YLNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQV 540
Query: 541 KFKLDNVDNNATYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLH 600
KF+LDNVD+ ATYKLRVALASAS+AELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGL+
Sbjct: 541 KFELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLY 600
Query: 601 WHYNIDIPGNRLFTGDNTIFFTQPRSTGPFQALMYDYIRLEAPPPP 636
W YN++IPGNRL +GDNTIFFTQPRST PFQA+MYDYIRLEAPPPP
Sbjct: 601 WLYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPP 645
BLAST of Sed0006316 vs. TAIR 10
Match:
AT1G09890.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 950.7 bits (2456), Expect = 6.2e-277
Identity = 434/618 (70.23%), Postives = 516/618 (83.50%), Query Frame = 0
Query: 17 MGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLVWSPSASTTGSFDVIKA 76
M NGI +VTLS PDG+V GI YNGIDNLLEVLN+E NRGYWDLVW S T G FDVIK
Sbjct: 1 MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGS-GTAGGFDVIKG 60
Query: 77 TDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGSSGFYSYAIYQHLKEWP 136
++FEVIV+NE+Q+ELSFTRKWD S EGK VPL IDKRF+ML GSSGFY+YAIY+HLKEWP
Sbjct: 61 SNFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWP 120
Query: 137 GFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRALAYPEAVLLVDPVEPE 196
F+L E+R+AFKLRK+KFHYMA+ D+RQR MPLPDDR RG+ALAYPEAVLLV+P+E +
Sbjct: 121 AFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQ 180
Query: 197 LRGEVDDKYQYSCDNKDSGVHGWISSD-PPVGFWLITPSNEFRSGGPVKQNLTSHVGPTT 256
+GEVDDKYQYSC+NKD VHGWI ++ P VGFWLITPS+E+R+GGP KQNLTSHVGPT
Sbjct: 181 FKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTA 240
Query: 257 LAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSY-DSSDALQLWEDAKAQATIEV 316
LAVFISAHY GEDLVPK GE WKKVFGPVF+YLNSS D +D L LW+DAK+Q +E
Sbjct: 241 LAVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEA 300
Query: 317 QSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVGLASPGDVGSWQRES 376
+SWPYSFPAS+D++K QRGN+ GRLLV+D YV +D+I AN +VGLA PG GSWQRE
Sbjct: 301 ESWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQREC 360
Query: 377 KGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINITDQDSQIDVGDIIY 436
K YQFW+R DE G+F+I G+ PG YNLY+W+PGFIGDY+YDD+I IT I V D++Y
Sbjct: 361 KEYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITIT-SGCYIYVEDLVY 420
Query: 437 EPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDAD 496
+PPR G TLWEIG PDRSAAEFYVPDPNP Y+N LY NHPD+FRQYGLWERY+ELYPD D
Sbjct: 421 QPPRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKD 480
Query: 497 LVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNATYKLRVALASASLA 556
LVY VG +DY KDWF+AQVTRK +N T++GTTWQ+KF+L N+D N +Y LRVA+ASA+ +
Sbjct: 481 LVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFS 540
Query: 557 ELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNRLFTGDNTIFFTQPR 616
ELQ+ VN+ A P+F+SGLIGRDNSIARHGIHGL+W +N+++ G++L G+NT+F TQPR
Sbjct: 541 ELQIRVNNANASPMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPR 600
Query: 617 STGPFQALMYDYIRLEAP 633
ST PFQ +MYDYIR EAP
Sbjct: 601 STSPFQGIMYDYIRFEAP 616
BLAST of Sed0006316 vs. TAIR 10
Match:
AT1G09910.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 874.4 bits (2258), Expect = 5.6e-254
Identity = 404/630 (64.13%), Postives = 493/630 (78.25%), Query Frame = 0
Query: 5 GVQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLVWSPS 64
GV L + +R V M NGI+QVTLS P G++ GI YNGIDN+LEV N E+NRGYWDL W+
Sbjct: 48 GVHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEP 107
Query: 65 ASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGSSGFY 124
G FDVI F VIVE E+QVE+SF R WD SLEGK +PL IDKRFIMLRGSSG Y
Sbjct: 108 GG-KGIFDVISGVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVY 167
Query: 125 SYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRALAYP 184
SY IY+HLK+WPGF LGE+R+AFKLRKDKFHYMA+AD+R+R MP PDD R + L Y
Sbjct: 168 SYGIYEHLKDWPGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQ 227
Query: 185 EAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSGGPVK 244
EA LL P +P L+GEVDDKYQYSC+NKD VHGWIS DPPVGFW ITPSNEFRSGGP+K
Sbjct: 228 EASLLTAPCDPRLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLK 287
Query: 245 QNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDALQLWE 304
QNLTSHVGPTTLAVF S HYAG+ ++P+ GE WKKV+GPVFIYLNS+ + D L LW+
Sbjct: 288 QNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLCLWD 347
Query: 305 DAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVGLASP 364
DAK + EV+ WPYSF AS+D+ K +RG GRLL++D +++ D I A GA+VGLA P
Sbjct: 348 DAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAPP 407
Query: 365 GDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINITDQD 424
GD GSWQ E KGYQFW+ ADE+GYF I V PG+YNLY+WVP FIGDY ++ +T
Sbjct: 408 GDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVT-SG 467
Query: 425 SQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWE 484
I++GDI+YEPPR G TLWEIG+PDR A+EF++PDP+P VN++ ++H D+FRQYGLW+
Sbjct: 468 CMIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWK 527
Query: 485 RYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNATYKL 544
+Y+++YP+ DLVYTVGV+DY +DWFFA V RK + +GTTWQ+ F L+N+D A YKL
Sbjct: 528 KYTDMYPNDDLVYTVGVSDYRRDWFFAHVPRK-KGDVHEGTTWQIIFNLENIDQKANYKL 587
Query: 545 RVALASASLAELQVGVNDPKA-KPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNRLFT 604
RVA+ASA+LAELQ+ +ND +A +P+F++GLIGRDNSIARHGIHG++ Y ++IPGNRL
Sbjct: 588 RVAIASATLAELQIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRLVQ 647
Query: 605 GDNTIFFTQPRSTGPFQALMYDYIRLEAPP 634
GDNTIF QPR GPFQ +MYDYIRLE PP
Sbjct: 648 GDNTIFLKQPRCNGPFQGIMYDYIRLEGPP 674
BLAST of Sed0006316 vs. TAIR 10
Match:
AT4G24430.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 873.2 bits (2255), Expect = 1.3e-253
Identity = 410/635 (64.57%), Postives = 501/635 (78.90%), Query Frame = 0
Query: 6 VQLFITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDLVWSPSA 65
VQL + E V MGNG V+VT+S PDG V GI Y G+DNLLE N++ NRGYWDLVWS
Sbjct: 7 VQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEG 66
Query: 66 S--TTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGSSGF 125
+ TTG + IK T FEV+VENE+ VE+SF+RKWD SL+ + P+ +DKRFIM + +GF
Sbjct: 67 TPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGF 126
Query: 126 YSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRALAY 185
YSYAI++HL EWP FNL ++R+ +KLRKDKF YMA+ADNRQR MPLP+DR RGR LAY
Sbjct: 127 YSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAY 186
Query: 186 PEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSGGPV 245
PEAVLLV PVE E +GEVDDKY+YS +NKD VHGWIS + +G W I PSNEFRSGG
Sbjct: 187 PEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLS 246
Query: 246 KQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYD-SSDALQL 305
KQNLTSHVGP +LA+F+SAHYAGED+V K+ AG+ WKKVFGPVF YLN D +SD L L
Sbjct: 247 KQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSL 306
Query: 306 WEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVGLA 365
W+DAK Q EVQSWPY FPASEDF ++RG ISGRLLV D ++S+D++PANGAFVGLA
Sbjct: 307 WQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLA 366
Query: 366 SPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINITD 425
PG+VGSWQ ESKGYQFW+ AD GYF I+ + G+YNL +V G+IGDY+Y+ LINIT
Sbjct: 367 PPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINIT- 426
Query: 426 QDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGL 485
IDVG+I+YEPPR G T+WEIG+PDRSAAEF+VPDPNP Y+NKLY+ HPD+FRQYGL
Sbjct: 427 AGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGL 486
Query: 486 WERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNATY 545
WERY+ELYP DLV+T+GV+DY KDWFFA VTRK + T++ TTWQ+KFKL+NV + TY
Sbjct: 487 WERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTY 546
Query: 546 KLRVALASASLAELQVGVND---PKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGN 605
K+R+ALA+A++AELQV +ND K P+F++G+IG DN+IARHGIHG++ YN+D+P
Sbjct: 547 KIRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSE 606
Query: 606 RLFTGDNTIFFTQP-RSTGPFQALMYDYIRLEAPP 634
+L GDNT+F TQ +TG F LMYDYIRLE PP
Sbjct: 607 KLVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPP 640
BLAST of Sed0006316 vs. TAIR 10
Match:
AT1G09880.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 817.0 bits (2109), Expect = 1.1e-236
Identity = 386/624 (61.86%), Postives = 481/624 (77.08%), Query Frame = 0
Query: 17 MGNGIVQVTLSNPDGLVIGIRYNGIDNLLE-VLNDESNRGYWDLVWS----PSASTTGSF 76
M N +Q+TLSNP+G V GI+YNGIDN+L N E +RGYWD+VW+ + T G+
Sbjct: 1 MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60
Query: 77 DVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRGSSGFYSYAIYQH 136
D I+AT EVI +N++++ELSFTR W+ S VP+ IDKRF+ML+ SSGFYSYAI++
Sbjct: 61 DRIEATKMEVITQNDEKIELSFTRTWNTS-STTAVPVNIDKRFVMLQNSSGFYSYAIFER 120
Query: 137 LKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGRALAYPEAVLLVD 196
L+ WP L RL FKL K KFHYMA++D+RQR MP+PDDR PRG+ LAYPEAV L+D
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180
Query: 197 PVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRSGGPVKQNLTSHV 256
P+EPE +GEVDDKY+YS ++KD VHGWIS++ VGFW ITPSNEFRS GP+KQ L SHV
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHV 240
Query: 257 GPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDALQLWEDAKAQAT 316
GPT LAVF S HY G DL+ GE WKKVFGPVFIYLNS D L LW +AK Q
Sbjct: 241 GPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTK 300
Query: 317 IEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFVGLASPGDVGSWQ 376
IE + WPY+F AS+DF +QRG++SGRLLV+D ++S + IPANG++VGLA+PGDVGSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360
Query: 377 RESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLINITDQDSQIDVGD 436
RE KGYQFWS+ADE+G F I+ V G YNLY++ PGFIGDY D + +I+ S+I +GD
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDIS-PGSKISLGD 420
Query: 437 IIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNHPDKFRQYGLWERYSELYP 496
++YEPPR G TLWEIGVPDRSAAEFY+PDPNP++VNKLYLNH DK+RQYGLWERYSELYP
Sbjct: 421 LVYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYP 480
Query: 497 DADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDNNAT--YKLRVALA 556
D D+VY V ++DY+K+WFF QVTRK NG +KGTTWQ++F+ D+ N T +KLR+ALA
Sbjct: 481 DEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALA 540
Query: 557 SASLAELQVGVNDPKA-KPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPGNRLFTGDNTI 616
++++AELQV VND A P+F + IGRDN+IARHGIHGL+W Y++++P L G+NTI
Sbjct: 541 TSNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTI 600
Query: 617 FFTQPRSTGPFQALMYDYIRLEAP 633
+ TQ +T PFQ LMYDYIRLE P
Sbjct: 601 YLTQALATSPFQGLMYDYIRLEYP 622
BLAST of Sed0006316 vs. TAIR 10
Match:
AT2G22620.1 (Rhamnogalacturonate lyase family protein )
HSP 1 Score: 748.4 bits (1931), Expect = 4.7e-216
Identity = 356/634 (56.15%), Postives = 457/634 (72.08%), Query Frame = 0
Query: 1 MPPLGVQL-FITERQVTMGNGIVQVTLSNPDGLVIGIRYNGIDNLLEVLNDESNRGYWDL 60
+P L VQL + V + NGIVQVT SNP+GL+ GI+Y+GIDN+L+ D+ RGYWD+
Sbjct: 47 IPALTVQLRRVGHDTVVVDNGIVQVTFSNPEGLITGIKYHGIDNVLDDKIDD--RGYWDV 106
Query: 61 VWSPSASTTGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKVVPLEIDKRFIMLRG 120
VW + D ++ T FE+I +NE+Q+E+SFTR W +S G +VPL +DKR+I+ G
Sbjct: 107 VWYEPEKKQKT-DKLEGTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSG 166
Query: 121 SSGFYSYAIYQHLKEWPGFNLGESRLAFKLRKDKFHYMAMADNRQRSMPLPDDRSLPRGR 180
SG Y Y I + L+ WP ++ + R+ FKL KF +MA++D+RQRSMP DR +
Sbjct: 167 VSGLYMYGILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRE--NSK 226
Query: 181 ALAYPEAVLLVDPVEPELRGEVDDKYQYSCDNKDSGVHGWISSDPPVGFWLITPSNEFRS 240
+LAY EAVLL +P P +GEVDDKY YS ++KD+ VHGWISSDPPVGFW+ITPS+EFR
Sbjct: 227 SLAYKEAVLLTNPSNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRL 286
Query: 241 GGPVKQNLTSHVGPTTLAVFISAHYAGEDLVPKIGAGEVWKKVFGPVFIYLNSSYDSSDA 300
GGP+KQ+LTSH GP TL++F S HYAG+++ GE WKKVFGPV YLNS
Sbjct: 287 GGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDST 346
Query: 301 LQLWEDAKAQATIEVQSWPYSFPASEDFLKPNQRGNISGRLLVKDSYVSEDYIPANGAFV 360
L+LW DAK Q EV+SWPY F SED+ +QRG + G+ L+KDSYVS I AFV
Sbjct: 347 LRLWRDAKRQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFV 406
Query: 361 GLASPGDVGSWQRESKGYQFWSRADESGYFFIDGVLPGDYNLYSWVPGFIGDYRYDDLIN 420
GLA G+ GSWQ ESKGYQFW++AD G F I+ V G+Y+LY+W GFIGDY+Y+ I
Sbjct: 407 GLAPIGEAGSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNIT 466
Query: 421 ITDQDSQIDVGDIIYEPPRAGDTLWEIGVPDRSAAEFYVPDPNPNYVNKLYLNH-PDKFR 480
IT S+++VG ++YEPPR G TLWEIGVPDR+A EFY+PDP P +NKLY+N D+FR
Sbjct: 467 IT-PGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFR 526
Query: 481 QYGLWERYSELYPDADLVYTVGVNDYTKDWFFAQVTRKTENGTFKGTTWQVKFKLDNVDN 540
QYGLW+RY++LYP DLVYT+GV+DY DWFFA V R N T++ TTWQ+ F L NV+
Sbjct: 527 QYGLWDRYADLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNR 586
Query: 541 NATYKLRVALASASLAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLHWHYNIDIPG 600
Y LR+ALASA+ +ELQ+ +NDPK+ +F++G IG+DN+IARHGIHGL+ Y+ID+ G
Sbjct: 587 IGRYTLRIALASAADSELQIRINDPKSDAIFTTGFIGKDNAIARHGIHGLYRLYSIDVAG 646
Query: 601 NRLFTGDNTIFFTQPRSTGPFQALMYDYIRLEAP 633
N L GDNTIF TQ RS PFQ +MYDYIRLE+P
Sbjct: 647 NLLSVGDNTIFLTQTRSRTPFQGIMYDYIRLESP 674
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023537007.1 | 0.0e+00 | 91.50 | probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo] >XP... | [more] |
XP_023001855.1 | 0.0e+00 | 90.87 | rhamnogalacturonate lyase B-like isoform X2 [Cucurbita maxima] | [more] |
KAG7020263.1 | 0.0e+00 | 91.02 | rhiE [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022951036.1 | 0.0e+00 | 90.87 | probable rhamnogalacturonate lyase B isoform X2 [Cucurbita moschata] | [more] |
XP_023001852.1 | 0.0e+00 | 89.32 | probable rhamnogalacturonate lyase B isoform X1 [Cucurbita maxima] >XP_023001853... | [more] |
Match Name | E-value | Identity | Description | |
Q5B5P1 | 2.4e-15 | 22.43 | Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain FGSC A4 / AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KMB3 | 0.0e+00 | 90.87 | Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV... | [more] |
A0A6J1GGG5 | 0.0e+00 | 90.87 | Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 ... | [more] |
A0A6J1KHT0 | 0.0e+00 | 89.32 | Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111495919 PE=3 SV... | [more] |
A0A6J1BSU2 | 0.0e+00 | 89.61 | Rhamnogalacturonan endolyase OS=Momordica charantia OX=3673 GN=LOC111005034 PE=3... | [more] |
A0A6J1GGK0 | 0.0e+00 | 89.32 | Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111454003 PE=3 ... | [more] |