Sed0006314 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCAAAGTGAAAGCATTAATATTGATATTGATAAGTACAGAGCTTTCTTGCATTTGGAGGCTCCAACTATTCACTGGAGGCATGGAAATCCCCCATCTTTTCAAGCTGTTAACCAGCTCTTTGAAGATGGCAGAACCAAGGTCTTTTTTTTAAAAACTTTTTTGTTAAAATATCATAAATTAGCTTTATTATTATTATTTTTTTGAAAATTGGGAAATCACAATTTCGCTCCCTTATACTCGGGGCACTACTGACCCATCTCTAGACTGTGGCACCGAGATACTTCGAAGCGTATGCTTTCTAGCGGCCTCGAATCAAAGATCTCTCAAGAAAGCATATATTTCGAAATCTTTAATCTCAAACCGTTGGAGTGTCTCTTGAGGACAGCTTTATTATTACTTTTGAAAATATGTTCATAATGTGTCTTTTTAATTTAAACTTTAATATCTTTAGTGACTTTAATTTGTTTCATTTGTGATAGGTATGGCCAAAAGGATTTCTGGAAGAAACAGTACAGAATACAGTCAAATCATTGCATATGGAGATTAACCACAAGACTAGGTTAGAGGATTTCAAGACCATAAACACTCACAAATTCAAAATATTTGTCAATGGTAAGTAGTTTGTTTGTTACATATATGCAAATTTGTTTCAATTTGCTCAAATAAATTAAGTCTAAATTATCCTTCAACTGAACTCAACTCACAATTTCTAAAGGATTTGCTAAAGGAAATCTAACTAATTGACATGTAACTCTCCAAAGAAAGTTAGAATTTGAAATTCCCACACAAAATATTTGAGTATTCCAAAAATCAAAGAACAACTCAATCAACTCAACCCAATTTTTGATGGGTCAGATTGGTTATCAATTTATTTGAATGGGTTGAATTCAAATAAATAAAATATTCATAGGTTAGGTTAATTCATGAGTTTATCTAAAATTTAGTTTGGATTCACTCAAGTTAACTATAAAGTTATTATTAATTTTAGAAAATACATTTTTATGTAATTATCTTGCATATATTTATTTTAATTTTATTATAAGTTCTTAAAAAGATATTTGGATTGAGTCTAAAAAATATGTTTCAACTCTACCAACGCCCTTCATTTGAACACCCGTAGTAGAAGTTATCATGTCGATTTATATAAAAATAGAAGTGAAAAAAATATAATATTTATAAGATAGGTGAACTATTCTTCTTATCACTAATTGTAAGATGAAACTTCATACCGTCAGATATCGAGATACACAGAACCCTATGTAGCTGAAGATGTCAAAAACTCAACTTTTAACTCTCTTGTATTTATGTAGGAAAAGATGGAGTGTCAGGTGAAGAAACAGTGAAGTTTGGAGTCATCAATGTGTTGCTAGAGAATTCTCTACCAAAGGAGTTTCACTATTTCAAAGCAGATGAAGAGTCATTTGAATCAGCATTCAAGGGTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAATCCCATTCTCCAACTGGTGATTTGATTCAATTCTATGGCTTGGCAACTCTCAAGGTAAAGTTGCCACCCAACCTACCTTATATATATATATGTATATATGCGCTCAAATATAACTTCAATATGCACATCTCGATTAATCACATACATGTTGATCTTACTATATGTAGGATAGTGTCTATATATAGTATATTTTCATTACTAGAAACATCAAAATGGGTAGTTGTACATGCCAAGATATATATCTCAAAACTAATTAAAATCATTATAAATTAGTTTAAAGGTTAAAGAGGGATGAGAGATCTGTGAAATTATGAATTCAATTTATGGTATCTACTTACCAAGCAATTAACTTTTACCAAGTTCTTTGACGGTCCTTTTTCTACCAAATACATGTTAGGACTTTTGGATTATGATATCAAATTTAGATAACATGAGATTTCATTTTAAAATTAATTGGAATAAGAGGAGTAGCCCACTAGTTAAAAACTTTTTTTATTTTTATTTTTTATATTCATTAACACTTCTTGACATGGATTTAATCAATCAAAATCAATTTTGATGGTATGTAAAACACATTTAAAAGTGGTTAAAGCCAAACATAAAATGATTTTGTGGGATCAAAGGTACATTTTTTTTTAATGATTTTCAACATGTTTGAAATTTGTCATATTAAAAATCATTAAAAATAATTCTTAATAAGTATGGTGATATTTACACAGGTAGACTCATCAATGAAGGTTGAAGAAACTCATATATACTATGATCCAACAGAGCTGTTTGGAGGTCTTTTAAAGGGCAAAAAATCTGACTCAGAATCCAAAACCCAACAAAGTAATGACAAAAATTTTGCTAATTCAGCTGCCTGCCCATTTTCCAAACTCAACAAATAG ATGGAACCAAAAGCTTTCTTGCATTTGGAGGCTCCAACTATTCACTGGAGGCATGGAAATCCCCCATCTTTTCAAGCTGTTAACCAGCTCTTTGAAGATGGCAGAACCAAGGTATGGCCAAAAGGATTTCTGGAAGAAACAGTACAGAATACAGTCAAATCATTGCATATGGAGATTAACCACAAGACTAGGTTAGAGGATTTCAAGACCATAAACACTCACAAATTCAAAATATTTGTCAATGGAAAAGATGGAGTGTCAGGTGAAGAAACAGTGAAGTTTGGAGTCATCAATGTGTTGCTAGAGAATTCTCTACCAAAGGAGTTTCACTATTTCAAAGCAGATGAAGAGTCATTTGAATCAGCATTCAAGGGTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAATCCCATTCTCCAACTGGTGATTTGATTCAATTCTATGGCTTGGCAACTCTCAAGGTAGACTCATCAATGAAGGTTGAAGAAACTCATATATACTATGATCCAACAGAGCTGTTTGGAGGTCTTTTAAAGGGCAAAAAATCTGACTCAGAATCCAAAACCCAACAAAGTAATGACAAAAATTTTGCTAATTCAGCTGCCTGCCCATTTTCCAAACTCAACAAATAG ATGGAACCAAAAGCTTTCTTGCATTTGGAGGCTCCAACTATTCACTGGAGGCATGGAAATCCCCCATCTTTTCAAGCTGTTAACCAGCTCTTTGAAGATGGCAGAACCAAGGTATGGCCAAAAGGATTTCTGGAAGAAACAGTACAGAATACAGTCAAATCATTGCATATGGAGATTAACCACAAGACTAGGTTAGAGGATTTCAAGACCATAAACACTCACAAATTCAAAATATTTGTCAATGGAAAAGATGGAGTGTCAGGTGAAGAAACAGTGAAGTTTGGAGTCATCAATGTGTTGCTAGAGAATTCTCTACCAAAGGAGTTTCACTATTTCAAAGCAGATGAAGAGTCATTTGAATCAGCATTCAAGGGTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTTCAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAATCCCATTCTCCAACTGGTGATTTGATTCAATTCTATGGCTTGGCAACTCTCAAGGTAGACTCATCAATGAAGGTTGAAGAAACTCATATATACTATGATCCAACAGAGCTGTTTGGAGGTCTTTTAAAGGGCAAAAAATCTGACTCAGAATCCAAAACCCAACAAAGTAATGACAAAAATTTTGCTAATTCAGCTGCCTGCCCATTTTCCAAACTCAACAAATAG MEPKAFLHLEAPTIHWRHGNPPSFQAVNQLFEDGRTKVWPKGFLEETVQNTVKSLHMEINHKTRLEDFKTINTHKFKIFVNGKDGVSGEETVKFGVINVLLENSLPKEFHYFKADEESFESAFKGCFPRGFAWEIIEVYSGPPLIAFKFRHWGFFEGPYKSHSPTGDLIQFYGLATLKVDSSMKVEETHIYYDPTELFGGLLKGKKSDSESKTQQSNDKNFANSAACPFSKLNK Homology
BLAST of Sed0006314 vs. NCBI nr
Match: XP_022142928.1 (pathogen-related protein-like [Momordica charantia]) HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95 Identity = 163/231 (70.56%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Sed0006314 vs. NCBI nr
Match: XP_023516553.1 (pathogen-related protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94 Identity = 163/231 (70.56%), Postives = 194/231 (83.98%), Query Frame = 0
BLAST of Sed0006314 vs. NCBI nr
Match: XP_022942368.1 (pathogen-related protein [Cucurbita moschata] >KAG6600504.1 hypothetical protein SDJN03_05737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 356.3 bits (913), Expect = 2.0e-94 Identity = 162/231 (70.13%), Postives = 195/231 (84.42%), Query Frame = 0
BLAST of Sed0006314 vs. NCBI nr
Match: XP_022982433.1 (pathogen-related protein-like [Cucurbita maxima]) HSP 1 Score: 354.8 bits (909), Expect = 5.9e-94 Identity = 161/231 (69.70%), Postives = 194/231 (83.98%), Query Frame = 0
BLAST of Sed0006314 vs. NCBI nr
Match: XP_038904524.1 (pathogen-related protein-like [Benincasa hispida]) HSP 1 Score: 348.6 bits (893), Expect = 4.2e-92 Identity = 158/231 (68.40%), Postives = 192/231 (83.12%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 176.4 bits (446), Expect = 3.8e-43 Identity = 87/197 (44.16%), Postives = 120/197 (60.91%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy TrEMBL
Match: A0A6J1CPH1 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111012921 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95 Identity = 163/231 (70.56%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy TrEMBL
Match: A0A6J1FUM9 (pathogen-related protein OS=Cucurbita moschata OX=3662 GN=LOC111447433 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 9.8e-95 Identity = 162/231 (70.13%), Postives = 195/231 (84.42%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy TrEMBL
Match: A0A6J1J4T6 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481259 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94 Identity = 161/231 (69.70%), Postives = 194/231 (83.98%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy TrEMBL
Match: A0A6J1ETM3 (pathogen-related protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437625 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 6.6e-91 Identity = 161/232 (69.40%), Postives = 189/232 (81.47%), Query Frame = 0
BLAST of Sed0006314 vs. ExPASy TrEMBL
Match: A0A6J1EYN7 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437625 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 8.6e-91 Identity = 160/232 (68.97%), Postives = 189/232 (81.47%), Query Frame = 0
BLAST of Sed0006314 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 302.0 bits (772), Expect = 4.2e-82 Identity = 140/224 (62.50%), Postives = 174/224 (77.68%), Query Frame = 0
BLAST of Sed0006314 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 292.7 bits (748), Expect = 2.6e-79 Identity = 139/224 (62.05%), Postives = 171/224 (76.34%), Query Frame = 0
BLAST of Sed0006314 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 234.6 bits (597), Expect = 8.3e-62 Identity = 111/177 (62.71%), Postives = 137/177 (77.40%), Query Frame = 0
BLAST of Sed0006314 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 234.6 bits (597), Expect = 8.3e-62 Identity = 111/177 (62.71%), Postives = 137/177 (77.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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