Sed0006313 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGACATTTGCAATTGGCATCAAATTCCCTAATTACCCCTAACTTTGTCAGTCCCCATATTCCCTTTTCTTCTTCTCTTTGCTTCCTTTTTTGTTAACCCACAAAATCCCCCTCCCAATCTCCACCATTGCCAAACTTTACTCAACCTTCATCAATTTCTCATTCTCTTCATCAATGTCTTCAATCCCACAAATCTTTGTTCTATTCTTCATCACTTTCTCTAATTTCCCATTGTTTTTCTCTCTTCCCCATCCAGACCCACTTACCATCCGCCCATTTCAGGTGAACCAGTCGTCGCCGGCGACCATTCCGGCGTTCCCTGAACAATCCGACGTTCAGGGCTGCCCGTTAGACCTACCCGACGAGCTCTTTCATGGGATTAAGACGGCTTGCGGTCCCTCAAAAGGGGGTGTTTCCGGGCAGCTCCACCGCAGCCGCTGCTGCCCGGTTTTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCACCGCGTTGCAGAGGGCTGGTTCTCGTCACACGGCGGCGACGGCGGCGTATGATCTGCCCCTGCTGCCCGATGACTCCGAAACTTGCGTTGGTAACTTGGATCAGGCTTTGAATCAAAGGGGAATTGAGTTAGTGAAGCCTAATGAAACTTGTGATGTGGTTTATTGCTATTGTGGGATTAGATTGCACCCTTTGAGCTGCTCTGAGGCGTTTTCAGTGAACAGAAATGGGATTTTTGAAGGGGATAGGAATGTGAAGAGATTGGAGAGGAATTGCTTGAGTAGTGGCAATGTTAATGGATTTCCTGGACTTGGCGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTGAGCATTTTTTTTCTTCTCATCTCTCTATAATTAACACCATTGCATTGAATTGAAGCTTGTTTGAGTTTTCTGTGTCATTAAATGATTTGGTTCATTTCTGCATCTAAGATGTTTTTTGATAAAGGAATGAAAATTTCGCACCACTACATATTCGGGTTACCCGCGCCTGATTTCGGCATCTAAGATTTATCAGAACATTATAGGTAGGGTGATTATCTGGTTAACTGTTAGCCATCTTGATGGGATTTTTTTTTTTTTTTTAATATATCGTAGGAGGGGAGACAGATACCGGTGACGTTAGTGTTGAATTATTGTGCCACTAATCCATTAAGTGGGATTTTTTTTTTTGGAATTGTTTCAAATGAAAGGAATCATCTAGTTTCGAAAGGATAGTCTAGTTGGTTATTGATTGAGGCCTATACTTTCAAGGCAGGCTCGTTTGGAGATTTTAGATTCGAACTCACGAGTGAGCTAAACTGTAAAATTATTTGTTGTCTTTTGTGACTTATCCGATGTTACAAACAGACACAAGTACCCTTGAGTATAGTGGAGTGAAGTTCTAATTTTCGAGTTAAGAATTTATTTTTTTTGAAGGAATCATTTGAAAGGGAAAACAAAAATTGTAACTGGAAGTGGTCCACTTGGTTGTTACTACTGACTAGTGAAGAACCATGACAAACTCACGTGATCTTGATAAAGATCAACCCGTATATGACATGTGGCATTCTCTGTTTGGCTGGCGAAAACTGTAGATCATATCATTCAATAACATGTGAATTCATTTGATGTTGATCAATCACGTATCATGTTTGTAGTTCAAATTTATTGCTGTAAATGGTCGAAGAAAACAGCACAAGCCTCCAGATTTCTGCTATAGAATCTTGTTGGGAATGCTTTCACTCCATTTTACTTGGATTTTTGTGGCATGGTGGTCCATAAGGATTACGTAAATGATAAAGGAAAGGGTGTGAACCGATTAATCTCATGTTGACCACCTATTTAGAATTTAATATCATACGGGTTACCTTTTGGAAACTAAATATAATAGGGTCAAATGGGTTGACTTAGTGGTCAAAGAAGGCTTTAGAGATCTAAAAAGCTATGAGTTCTATTCACGGGGGCTATATTTAAGAAATATTTTCTTACAGATTTCTTTGATATCTAAATATTGCAAGTAAGTAGATATGTGATGTGAAAATAGTGAAAGTGCGTATAAACTGACTCTGATATTGATATATATAAATAAATATAGAAGTAGACTACTGAAAATAGTTTTAATGCCTACAAACTTGCCTCACATAAAAGATATGAAAAAAACACAAGATTATTGAACTTGTAAAGTTTAGTGTCAAATCAACCTTGTTTGTTTACAATACTCCACATTGTATGGAGTTTAGATCATTGTTGTTTGATTACATGTGGTTCCCAGCTAATTATTTAAATACCATAAACTAATGCACCAAACATATATGATTATGTATTTGGCAATTGAGACATTAACATAATGCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAGCCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACAGCGTATATTCACACCGTTACGTCGGTGCTTCGGGCTAAAATGATGAGCGAAGACGGGTCGGATCCTCAGTCATGTACTCTCAACAGCGATGGAAAGCCTCTGGCTGTCGATTCTGCCGAGATCTCAAGCAGTTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTCCAATCTGATCATGTTGTTTTCTACACAATGAGGTTAGAAGTAATTCCACTTAGAAATTTGTAATTGTGACCCTCTTTTTCTTCCTTTTTGTGTAGGTTTTTTTGTGCATTGTGATTGTTGTTTTGTATTCATGAGGTTTCAGAATTTGTCTCTGTTCTCTGTGTTGATTAGAAAATTGCAAAATTCTTTTCTGATGTGTCCTCAGGGTAAGTTGCATTTTTGCATAGGCCCTTGAAATTGGCCATTTTGTGTGA GTGACATTTGCAATTGGCATCAAATTCCCTAATTACCCCTAACTTTGTCAGTCCCCATATTCCCTTTTCTTCTTCTCTTTGCTTCCTTTTTTGTTAACCCACAAAATCCCCCTCCCAATCTCCACCATTGCCAAACTTTACTCAACCTTCATCAATTTCTCATTCTCTTCATCAATGTCTTCAATCCCACAAATCTTTGTTCTATTCTTCATCACTTTCTCTAATTTCCCATTGTTTTTCTCTCTTCCCCATCCAGACCCACTTACCATCCGCCCATTTCAGGTGAACCAGTCGTCGCCGGCGACCATTCCGGCGTTCCCTGAACAATCCGACGTTCAGGGCTGCCCGTTAGACCTACCCGACGAGCTCTTTCATGGGATTAAGACGGCTTGCGGTCCCTCAAAAGGGGGTGTTTCCGGGCAGCTCCACCGCAGCCGCTGCTGCCCGGTTTTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCACCGCGTTGCAGAGGGCTGGTTCTCGTCACACGGCGGCGACGGCGGCGTATGATCTGCCCCTGCTGCCCGATGACTCCGAAACTTGCGTTGGTAACTTGGATCAGGCTTTGAATCAAAGGGGAATTGAGTTAGTGAAGCCTAATGAAACTTGTGATGTGGTTTATTGCTATTGTGGGATTAGATTGCACCCTTTGAGCTGCTCTGAGGCGTTTTCAGTGAACAGAAATGGGATTTTTGAAGGGGATAGGAATGTGAAGAGATTGGAGAGGAATTGCTTGAGTAGTGGCAATGTTAATGGATTTCCTGGACTTGGCGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAGCCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACAGCGTATATTCACACCGTTACGTCGGTGCTTCGGGCTAAAATGATGAGCGAAGACGGGTCGGATCCTCAGTCATGTACTCTCAACAGCGATGGAAAGCCTCTGGCTGTCGATTCTGCCGAGATCTCAAGCAGTTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTCCAATCTGATCATGTTGTTTTCTACACAATGAGGTTAGAAGTAATTCCACTTAGAAATTTGTAATTGTGACCCTCTTTTTCTTCCTTTTTGTGTAGGTTTTTTTGTGCATTGTGATTGTTGTTTTGTATTCATGAGGTTTCAGAATTTGTCTCTGTTCTCTGTGTTGATTAGAAAATTGCAAAATTCTTTTCTGATGTGTCCTCAGGGTAAGTTGCATTTTTGCATAGGCCCTTGAAATTGGCCATTTTGTGTGA ATGTCTTCAATCCCACAAATCTTTGTTCTATTCTTCATCACTTTCTCTAATTTCCCATTGTTTTTCTCTCTTCCCCATCCAGACCCACTTACCATCCGCCCATTTCAGGTGAACCAGTCGTCGCCGGCGACCATTCCGGCGTTCCCTGAACAATCCGACGTTCAGGGCTGCCCGTTAGACCTACCCGACGAGCTCTTTCATGGGATTAAGACGGCTTGCGGTCCCTCAAAAGGGGGTGTTTCCGGGCAGCTCCACCGCAGCCGCTGCTGCCCGGTTTTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCACCGCGTTGCAGAGGGCTGGTTCTCGTCACACGGCGGCGACGGCGGCGTATGATCTGCCCCTGCTGCCCGATGACTCCGAAACTTGCGTTGGTAACTTGGATCAGGCTTTGAATCAAAGGGGAATTGAGTTAGTGAAGCCTAATGAAACTTGTGATGTGGTTTATTGCTATTGTGGGATTAGATTGCACCCTTTGAGCTGCTCTGAGGCGTTTTCAGTGAACAGAAATGGGATTTTTGAAGGGGATAGGAATGTGAAGAGATTGGAGAGGAATTGCTTGAGTAGTGGCAATGTTAATGGATTTCCTGGACTTGGCGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAAGAAGGAAACTTTGAATTCAAGCAAGCCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACAGCGTATATTCACACCGTTACGTCGGTGCTTCGGGCTAAAATGATGAGCGAAGACGGGTCGGATCCTCAGTCATGTACTCTCAACAGCGATGGAAAGCCTCTGGCTGTCGATTCTGCCGAGATCTCAAGCAGTTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTCCAATCTGATCATGTTGTTTTCTACACAATGA MSSIPQIFVLFFITFSNFPLFFSLPHPDPLTIRPFQVNQSSPATIPAFPEQSDVQGCPLDLPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGSRHTAATAAYDLPLLPDDSETCVGNLDQALNQRGIELVKPNETCDVVYCYCGIRLHPLSCSEAFSVNRNGIFEGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTTKMHHKECQLMGLTWLLAKNRTAYIHTVTSVLRAKMMSEDGSDPQSCTLNSDGKPLAVDSAEISSSSVSTPIQASLYLGLVWLALLSNLIMLFSTQ Homology
BLAST of Sed0006313 vs. NCBI nr
Match: XP_023005177.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]) HSP 1 Score: 595.5 bits (1534), Expect = 2.8e-166 Identity = 295/334 (88.32%), Postives = 308/334 (92.22%), Query Frame = 0
BLAST of Sed0006313 vs. NCBI nr
Match: KAG6587677.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 594.0 bits (1530), Expect = 8.1e-166 Identity = 296/335 (88.36%), Postives = 310/335 (92.54%), Query Frame = 0
BLAST of Sed0006313 vs. NCBI nr
Match: XP_038880109.1 (uncharacterized GPI-anchored protein At4g28100 [Benincasa hispida]) HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165 Identity = 297/335 (88.66%), Postives = 307/335 (91.64%), Query Frame = 0
BLAST of Sed0006313 vs. NCBI nr
Match: KAG7021641.1 (putative GPI-anchored protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 592.4 bits (1526), Expect = 2.4e-165 Identity = 294/334 (88.02%), Postives = 308/334 (92.22%), Query Frame = 0
BLAST of Sed0006313 vs. NCBI nr
Match: XP_023531799.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 592.0 bits (1525), Expect = 3.1e-165 Identity = 294/334 (88.02%), Postives = 308/334 (92.22%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy Swiss-Prot
Match: Q9SUC9 (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 3.7e-52 Identity = 121/278 (43.53%), Postives = 161/278 (57.91%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy TrEMBL
Match: A0A6J1KSF1 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 GN=LOC111498281 PE=4 SV=1) HSP 1 Score: 595.5 bits (1534), Expect = 1.4e-166 Identity = 295/334 (88.32%), Postives = 308/334 (92.22%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy TrEMBL
Match: A0A6J1F5L3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=3662 GN=LOC111441048 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 9.7e-165 Identity = 292/334 (87.43%), Postives = 307/334 (91.92%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy TrEMBL
Match: A0A5D3DY25 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001150 PE=4 SV=1) HSP 1 Score: 584.3 bits (1505), Expect = 3.1e-163 Identity = 291/335 (86.87%), Postives = 304/335 (90.75%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy TrEMBL
Match: A0A5A7UTR5 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004370 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.2e-162 Identity = 291/335 (86.87%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of Sed0006313 vs. ExPASy TrEMBL
Match: A0A1S3BWB4 (uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103494171 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.2e-162 Identity = 291/335 (86.87%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of Sed0006313 vs. TAIR 10
Match: AT3G18050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 350.5 bits (898), Expect = 1.5e-96 Identity = 187/316 (59.18%), Postives = 224/316 (70.89%), Query Frame = 0
BLAST of Sed0006313 vs. TAIR 10
Match: AT4G28100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 206.8 bits (525), Expect = 2.6e-53 Identity = 121/278 (43.53%), Postives = 161/278 (57.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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