Sed0006306 (gene) Chayote v1

Overview


Name	Sed0006306
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA repair protein recA
Location	LG14: 1332682 .. 1338396 (-)
RNA-Seq Expression	Sed0006306
Synteny	Sed0006306

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAAAGGAAAAAAAATGTTTTTAGGGTTTAGTTGAGGTTTTAACCATTTACTTTGATTCAAAGATTAGAGCACCAAAAACAACAATGGAGCTTCTTCTCTGCAAAAGTCCGAAGCGCCAAAGTTGATAATCTGAAATCTCCATAAAGTTTTGCAAGCCATGTCGTTGTTCTACTCACCTTCACTCTTCCGCTCTCGCCATCTCAAGCACTTTGGAGCACCAAGCTTTTCTTCTCTCTTCCACTCCCTCCGCCAGGTCGCTTTCCTCTTACTTCATATACCATGTCTTTGATTCATTTTCTTCTGTTCTTGTTGGAATTTGCACGTTTTCGCTTCTGGGTTTCGTCCCTAATGTCCTGTGTGTGCTCAAGTTCATTAGATTTTGCCCCATGTACAAGGATACTTGTTTTCTTCTTGTCATTTTGATATTTTGGGAATGTAGGCCCCGTTTGATAACCATTTGGTTTTTGAAATTTATGCCTATTTTTACTCAAATTTCCTATGACGTGTTCTACATTTCCTACGATCTATCCATTTTTCCGGAAGAAAGTAAGTGAATGCTAACCAACTTTTAAAAACAAAAATAAACTTTTGGAAGTTACTTTTTTTTGTTTCCAAGTTTTGGTTTGGTTTCTACAAATATAGGTGAGAGGTAGATATCCAAGTAAGAAAAAACATATGGTAAGGTAGTTGTTGTAGGCTTACATTTCAAAAACAAAAAACAAAATGGTTATCAAACGAGGCCGTAGTTATGTGAATTTGGTTTTATTTTTGTACGTTGAAGTTGGGATTTGGATGAAAGTGTGAAGTGTCGTATGAATGTGAATTAGATATCATTCTTAGAGAATAGGGCTTTTGATATTAGATAGAGTGGTGTTACTTCTCAAAACTAATCGGTAATGAGCGGAGTAGCCCACATATTATATAAACGTGTTGACGTCACCCTTACAATGTGAGATATTTAGTATGCCTCTCAAGATGGTAACATTTTTAAAATGTCATCTTGAATTAGATCTGAATTTGTAGTTCAAATTACCAGTTTGGTTTGTATTTGAATTTGTGGACCAAATACACACTTAGAGCTCTGATACCATATTAAAAAGTAGAATTGGTGATGAAGGGAGTAGCTCACATATTTTTATAAGGAAACTTACAACATTAGTCAAATCTAGAAAATAATTACAAATTTGGTCACTTTAAAAAAAAAGAAACTGTAGTCGTTGATACTAATGAGTATTGTTACATACTTTCTTATAACACTCTATTTAATAATACATAATACTGGATTAATGTGTATTTATAATACAGTATTAAAACGTATTAATGACTATGGATGCAAATATTTTAAAACTTGCATACATTTGTAATTAATTTGTGAGAAGAGCACATCCAATACAATTTTCCTATTTTATAAATGTGTAAAGAACTTCTCACTTTGGCAAGGGGGACATGGTGAGGATCTCCAATATTTGAAAGTTTCTTTTCCCTGTTTTTGCTTAGTAAATGGTAAGATTATGTGAATGGGGTTTCTCAGTATTGTTTTTCTTCTGTGACCCTCTCCCATTTTGTGCCAGAAGGGAAGGAGAGATGTGATCAGATGTTTGGAGATGGATGCTTGTCACTTTTCCTCACTAGGTAAAAAGGAAACATGCCAACAATCTCTTTATTTGCCTTTCATTAGCTATTTAAGAGATGTCCAATTGGTGGTTTCTGTTTATTTTGACATAAAATAATTTGTGTTTATCACTTTAGTGGATGTTTCGGAGTTTGAATGTGATAAGCTTTATGAGGATACTAGAACAGAGAAAGATGCTACACTTCGTCATGCAATCTCACAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGATTTTTCAGCTCTCGGTATGCACCTGTGATCTCTACTGGATCAGTAAAGCTTGACCTCGCTCTTGGGATCGGGGGATTACCTAAGGTGAGTAGTTGCTAGTTGAATTCTTCTTCGCCGTACATTTGATTCATTCACGTGTTTTGTGGATTTGGAATGCATTTGCGGTTAAGTTTTTTCCTTTTGAGCACAAACTTTACACATAGAAACACTCGTTGCTTCCCCTCCTTTTTCGTTTTATATCAACTATATATTTGATTCACGGTGTTGTTTGATTCAGATTGAAGAAAAGAAAAGTCTTTTAACTTCCACTCTAAATGTATAATGATTGTCCTTTAACCACATGCCTTATAATTTGTTTTGCTCTATGTTTTTTGTGTATCATATTTCATTTCTTCACCATATTTTTGAAGGGTGGGTTTGAGGGGCGATAGTACAGTTGTATGTAAAGATATTTGGTCAGAACAGAGCGGCCTTAATCACTCGACTTTTATTTCTTCACCTTAATTTTTCCTCACTTTGATGTTTAGGTTCTTTTGTAAATTTTTTCGTTCTATTGAGAAGTTTCTTTGGGCACTCTCGTATTTTTCATTTCTAGGAACTATATATTTTTTTAATCATAAAATTTTCATCATGCTTCAATTCTAAATAGTATAATTATAAATGAATTGCATAATATCAAAGTAGTTGCTACATAGTGGTTGAAGACTTAGGTTTTGAAGATATGCTCTCTTCAAGGTCCCAGGTTCGAGACTCACCTGTAATTACTCATTCGATGTCTTCGGTGTCTAGCCTAGGGACGGGCGTGGTTATCCTTGTTTCAAAAAACATATCAGAGTAGTTGCTAGCATAGATAGTATCTGTAATTTTGGTGTATGTACTTGTATGTTATACTCTCTAAATTATGAAGTATTGTATGTGAGCACTCTACTTGCTTTGCAGGGAAGAATGATTGAAATTTATGGGCAAGAAGCTTCTGGGAAGACAACGTTGGCGCTCCACATCATCAAGGAGGCTCAGAAACTTGGAGGTGTCGTTCGGTTTTGCCCTTTTTTTCTAGATCTAGAATGATAACACTACTTAAAAATTCAGGCACAGTGGTTGAAGACTTGGGCTTTGAGGGTACGCTTCACTCAAGGCCCAGGTTCGAGACTCACCTGTGACATTACTCCTTCGATGTCTCTCGGTGCCTGGTCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAAAAAAACTTAAAAATTCTGGCAAAATGTTTATTTTAAAAATATTTTGTTAAAGATAAAGCTCATTTGATTTAATATCAACCTGGCATTGGATTTTATGTCACTCTCTTCATCGTTTTTCCTTTTCATTTTTATCCAATCTTAATCGTTGATGCCCTAATAATTTGAAGCTGCTTGTTGGATCATGGATTATTATTGATTGCTCTCACTTCCAAATTCAAGTCTAGCCCCCAACTATAAAATGGTTAAAAATCATTTTTAGTCTTTAAAATTTCATGCAAGTAACAGTTTAGTCCTTAGATTTTTAGTTTTAATGATTTCATCTACATACTTTCAATTTTGTAACAATTTAGTCTTTGAACTTATCAATAGCTTTCTGGTTTCTTTGTTTCACTCTCTTATTTTTCTTCTTGATCTTTCCCCTGGGTAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATATCACTTGCTGAATCCATGGGTGTTAATGTGGATAATCTTCTTATTTCTCCTCAAGATTCCGCCGAAAATTTGTTGTGCTCCATTAATACTCTAGTCAAAAGTGGATCGGTCGACGTAATTGTGGTTGATAGCGTAAGACTACCTCGCCCTCTTATATTGTATCACCTATCACCAAACATTTTATTTAGTTAGGGTTCTGCTGTGGTTTTCTTCCTGTACGTTAAATTTCCGGATCAATATAGGAATATTTTCAATTATTTATGTCATTATTCACTTTTTTTTTCTTTTCCTGCTCTATTCTTTGGACTCATGATGTGTTAGTTATTGAGGAATGAAGTAATTAACTTTATGTTATTGATTCTTCTGTCTGCTAATGTGTTCATTGATGGTGGTTTATAAATGGACTCTTTAGGTAGCTGCTCTTGTCCCGCAATGCGAACTCGATGCTCTAGTTGGCAGTTCTCACCGAGACGTTCAATCACGAGTGATGACCCAAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTAATTGTGTTTATTAATCAGGTTGGGACTAAGTCGCACAAGTGCTGATTCATATTGTCATTTTAAGCTACCAATTAGCCTTTCAACATGCAGCATTGTCGTCTATTTACAGGTCAGATCAAGTGCAGGATCTCGGAACGGTTTCGGACGTAAGGATGAGGTAACCTGTGGTGGAAATGCATTACAATTTTATTCAGCAGTGAGATTGAGGCTTTTGAGAAGGGGATTACTGAAGAGTGGCGAAAAGGTAAACTCGAACACGGTTTACTGATGATTTACAATACACAACTCGTGCTGCTCATTTAATATTTGGGGCATTTGTGCAGGGGTTTTCCTTTCATTTGCTTGGGCTGTTCTTTTTGTTGGTCGGGTTCTTTCGTTCTTTTCTCAATGAAAGTTTGGCTCTAGTAGCAGACGTATATACATATTAAATATAATATGGGCTATCCTATATATACAGATATATACGTATATACATATAAATATATACACACACATTTATGCACACATACACACATTTATGGCCAAAAGGAGCATAGCTCTAATGACGTCTATGAGGTTACAGTTTTGAATCCTCCTCTCTAAATACTGTTAAATAAAAAAATATACACACATAAATTCATATATACACATACATATATATATATGCATGTATATACATGCATATGCTGGTTGTTTATTAGCAAGGTCTCAGGTTTTTCGGATAGAATGGTTTGTATTATCTTGTTTTCATAAATCCGATTATGGTCGTTATCAGGCGATCGGTCTGGCAGTCGGGGTTCAAGTGGTGAAAAATAAGCTAGCACCACCAATGAAAATGGCAGAACTGAGGCTACATTTTGGGAGGGGCTTATGCTGTGAATCAGAGGTTCTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGTAACTTCCATATAGAAGGGATGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGATGGAAAATGAAGATATTCTTCATAAGGTGGTTGAGATCTTAAGAAACCAGTTATTTGTTAAAGAGTGAAGTTCTTCAACAAACTATGCTCCTGTCAACATGCCTACATATTTATGTAGTATAGCTGTTTTAAGCAATTTTGTTCGTTTGGTCGTTTCTGATAACTTATGCAAGTGAAAATTCGTTGGAGAAATCGAAAGTCTTCTGAGCGTTCTCGCTCGAGAACCGACAGATGATCAAGAGTAACCATATAATCCATTCCTTGCCTTGATTAGCCGATGAAAGGAGCTTAGAGAGGATGTTGATGGTACAAGTAGGCTACAATTATTGGCATTTTATTTGGAATAGGGAGGAAGTTTTTTTGAGCAGGAACTAGGAATCAAGAATTTGGGTTCTTTGTTAAAATTCTTACCCAAATTCTTCCTCAATGCAGATACTTATAATTTGTTCTAAGAAATTTGTAGCAAGATTGTTTGTTATACTTTTTTCATGTAATTGTACTATTATAAAGTAGGATTAGAATGTTGATACTTTCAAAGCAAGGAAAAAGGAGGTTTGATGTAATGGAAATGTTGGCAATTAAAGAATGTATTGATGGAAATATTAAAATTGGAATGC

mRNA sequence

CTAAAAAGGAAAAAAAATGTTTTTAGGGTTTAGTTGAGGTTTTAACCATTTACTTTGATTCAAAGATTAGAGCACCAAAAACAACAATGGAGCTTCTTCTCTGCAAAAGTCCGAAGCGCCAAAGTTGATAATCTGAAATCTCCATAAAGTTTTGCAAGCCATGTCGTTGTTCTACTCACCTTCACTCTTCCGCTCTCGCCATCTCAAGCACTTTGGAGCACCAAGCTTTTCTTCTCTCTTCCACTCCCTCCGCCAGAAGGGAAGGAGAGATGTGATCAGATGTTTGGAGATGGATGCTTGTCACTTTTCCTCACTAGTGGATGTTTCGGAGTTTGAATGTGATAAGCTTTATGAGGATACTAGAACAGAGAAAGATGCTACACTTCGTCATGCAATCTCACAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGATTTTTCAGCTCTCGGTATGCACCTGTGATCTCTACTGGATCAGTAAAGCTTGACCTCGCTCTTGGGATCGGGGGATTACCTAAGGGAAGAATGATTGAAATTTATGGGCAAGAAGCTTCTGGGAAGACAACGTTGGCGCTCCACATCATCAAGGAGGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATATCACTTGCTGAATCCATGGGTGTTAATGTGGATAATCTTCTTATTTCTCCTCAAGATTCCGCCGAAAATTTGTTGTGCTCCATTAATACTCTAGTCAAAAGTGGATCGGTCGACGTAATTGTGGTTGATAGCGTAGCTGCTCTTGTCCCGCAATGCGAACTCGATGCTCTAGTTGGCAGTTCTCACCGAGACGTTCAATCACGAGTGATGACCCAAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTAATTGTGTTTATTAATCAGGTCAGATCAAGTGCAGGATCTCGGAACGGTTTCGGACGTAAGGATGAGGTAACCTGTGGTGGAAATGCATTACAATTTTATTCAGCAGTGAGATTGAGGCTTTTGAGAAGGGGATTACTGAAGAGTGGCGAAAAGGCGATCGGTCTGGCAGTCGGGGTTCAAGTGGTGAAAAATAAGCTAGCACCACCAATGAAAATGGCAGAACTGAGGCTACATTTTGGGAGGGGCTTATGCTGTGAATCAGAGGTTCTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGTAACTTCCATATAGAAGGGATGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGATGGAAAATGAAGATATTCTTCATAAGGTGGTTGAGATCTTAAGAAACCAGTTATTTGTTAAAGAGTGAAGTTCTTCAACAAACTATGCTCCTGTCAACATGCCTACATATTTATGTAGTATAGCTGTTTTAAGCAATTTTGTTCGTTTGGTCGTTTCTGATAACTTATGCAAGTGAAAATTCGTTGGAGAAATCGAAAGTCTTCTGAGCGTTCTCGCTCGAGAACCGACAGATGATCAAGAGTAACCATATAATCCATTCCTTGCCTTGATTAGCCGATGAAAGGAGCTTAGAGAGGATGTTGATGGTACAAGTAGGCTACAATTATTGGCATTTTATTTGGAATAGGGAGGAAGTTTTTTTGAGCAGGAACTAGGAATCAAGAATTTGGGTTCTTTGTTAAAATTCTTACCCAAATTCTTCCTCAATGCAGATACTTATAATTTGTTCTAAGAAATTTGTAGCAAGATTGTTTGTTATACTTTTTTCATGTAATTGTACTATTATAAAGTAGGATTAGAATGTTGATACTTTCAAAGCAAGGAAAAAGGAGGTTTGATGTAATGGAAATGTTGGCAATTAAAGAATGTATTGATGGAAATATTAAAATTGGAATGC

Coding sequence (CDS)

ATGTCGTTGTTCTACTCACCTTCACTCTTCCGCTCTCGCCATCTCAAGCACTTTGGAGCACCAAGCTTTTCTTCTCTCTTCCACTCCCTCCGCCAGAAGGGAAGGAGAGATGTGATCAGATGTTTGGAGATGGATGCTTGTCACTTTTCCTCACTAGTGGATGTTTCGGAGTTTGAATGTGATAAGCTTTATGAGGATACTAGAACAGAGAAAGATGCTACACTTCGTCATGCAATCTCACAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGATTTTTCAGCTCTCGGTATGCACCTGTGATCTCTACTGGATCAGTAAAGCTTGACCTCGCTCTTGGGATCGGGGGATTACCTAAGGGAAGAATGATTGAAATTTATGGGCAAGAAGCTTCTGGGAAGACAACGTTGGCGCTCCACATCATCAAGGAGGCTCAGAAACTTGGAGGATATTGTGCATATTTTGATGCAGAGAATGCAATGGACATATCACTTGCTGAATCCATGGGTGTTAATGTGGATAATCTTCTTATTTCTCCTCAAGATTCCGCCGAAAATTTGTTGTGCTCCATTAATACTCTAGTCAAAAGTGGATCGGTCGACGTAATTGTGGTTGATAGCGTAGCTGCTCTTGTCCCGCAATGCGAACTCGATGCTCTAGTTGGCAGTTCTCACCGAGACGTTCAATCACGAGTGATGACCCAAGCATTAAGGAAAATACATCAGTCACTGAGTCTATCTCAAACTCTAATTGTGTTTATTAATCAGGTCAGATCAAGTGCAGGATCTCGGAACGGTTTCGGACGTAAGGATGAGGTAACCTGTGGTGGAAATGCATTACAATTTTATTCAGCAGTGAGATTGAGGCTTTTGAGAAGGGGATTACTGAAGAGTGGCGAAAAGGCGATCGGTCTGGCAGTCGGGGTTCAAGTGGTGAAAAATAAGCTAGCACCACCAATGAAAATGGCAGAACTGAGGCTACATTTTGGGAGGGGCTTATGCTGTGAATCAGAGGTTCTGGAATTGGGTTGTGAGCATGGAGTTATTCTTAAAGATGGAAGTAACTTCCATATAGAAGGGATGATTTGCAGCAGCAAGCATGAAGCAGAACAGTATCTGATGGAAAATGAAGATATTCTTCATAAGGTGGTTGAGATCTTAAGAAACCAGTTATTTGTTAAAGAGTGA

Protein sequence

MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFECDKLYEDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE

Homology

[Close]

BLAST of Sed0006306 vs. NCBI nr
Match: XP_038883413.1 (DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 671.0 bits (1730), Expect = 6.3e-189
Identity = 348/400 (87.00%), Postives = 369/400 (92.25%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           MS F +P LFRS  LKHF A  FSSLFHSLRQ GRRDVI C  MDAC FSSLVDVSEFEC
Sbjct: 1   MSFFLAPPLFRSCRLKHFQASRFSSLFHSLRQ-GRRDVISCGGMDACLFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DK+ +DTR TEKDATLR AISQLAGDFGKESMLCLQRFFSSRYAPVISTGS+KLD+ALGI
Sbjct: 61  DKINDDTRTTEKDATLRSAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR+IEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+SLAESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP DSAENLLC++NTLVKSGSVDVIVVDSVAALVPQCELDAL+GS  +D QSRVMT+
Sbjct: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDSQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKIH SLSLSQTLI+F NQVRSSAGSRNGF   +EVTCGGNALQFY+AVRLRLLRRGL
Sbjct: 241 ALRKIHHSLSLSQTLIIFTNQVRSSAGSRNGFEHMNEVTCGGNALQFYAAVRLRLLRRGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKS +K  GLAVGVQVVKNKLAPPMKMAEL +HFGRGL CESEVLELGCEHGVIL+DGSN
Sbjct: 301 LKSDDKVTGLAVGVQVVKNKLAPPMKMAELGIHFGRGLWCESEVLELGCEHGVILQDGSN 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE 400
           FHIEG ICSSKHEAEQYLMENED+LHK+VEILRNQLFV+E
Sbjct: 361 FHIEGRICSSKHEAEQYLMENEDVLHKMVEILRNQLFVQE 399

[Close]

BLAST of Sed0006306 vs. NCBI nr
Match: XP_022153914.1 (DNA repair protein recA homolog 2, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 642.1 bits (1655), Expect = 3.1e-180
Identity = 329/399 (82.46%), Postives = 360/399 (90.23%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M+ F  PSL RS H+ +F     SSLFHSLRQKGR DVI CL M+A HFSSLVDVSEFEC
Sbjct: 1   MAFFLKPSLLRSSHVNYFRPSRLSSLFHSLRQKGRTDVIGCLGMNAHHFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DKLY+DTR T+KDA LR AISQL+GDFG+ESML LQ+FF SRYAPVISTGS+KLDLALGI
Sbjct: 61  DKLYDDTRTTKKDAALRLAISQLSGDFGEESMLSLQKFFGSRYAPVISTGSLKLDLALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR+IEIYG+EASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+SLAESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGREASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP DSAENLLC++NTLVKSGSVDVIVVDSVAALVPQCELD+L+GS   DVQSRVMT+
Sbjct: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDSLIGSPQTDVQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKI+ S+S SQTLIVFINQVRSSAGSR+GFG  DEVTCGGNALQFY+AVRLRL+R GL
Sbjct: 241 ALRKIYHSVSQSQTLIVFINQVRSSAGSRDGFGHMDEVTCGGNALQFYAAVRLRLVRMGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKS +K  GLA+GVQVVKNKLA PMKMAE+ +HFGRG CCESEVLE+GCEHGVILKDG  
Sbjct: 301 LKSEDKVTGLAIGVQVVKNKLAAPMKMAEMGIHFGRGFCCESEVLEMGCEHGVILKDGGI 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           FHIEG ICSSKHEAEQYLMENE +L+KVVEILRNQLFV+
Sbjct: 361 FHIEGRICSSKHEAEQYLMENEAVLNKVVEILRNQLFVQ 399

[Close]

BLAST of Sed0006306 vs. NCBI nr
Match: XP_038883414.1 (DNA repair protein recA homolog 2, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 635.6 bits (1638), Expect = 2.9e-178
Identity = 334/399 (83.71%), Postives = 353/399 (88.47%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           MS F +P LFRS  LKHF A  FSSLFHSLRQ GRRDVI C  MDAC FSSL        
Sbjct: 1   MSFFLAPPLFRSCRLKHFQASRFSSLFHSLRQ-GRRDVISCGGMDACLFSSL-------- 60

Query: 61  DKLYEDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIG 120
                    EKDATLR AISQLAGDFGKESMLCLQRFFSSRYAPVISTGS+KLD+ALGIG
Sbjct: 61  ---------EKDATLRSAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIG 120

Query: 121 GLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNL 180
           GLPKGR+IEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+SLAESMGVNVDNL
Sbjct: 121 GLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDNL 180

Query: 181 LISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQA 240
           LISP DSAENLLC++NTLVKSGSVDVIVVDSVAALVPQCELDAL+GS  +D QSRVMT+A
Sbjct: 181 LISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDALIGSPQQDSQSRVMTRA 240

Query: 241 LRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLL 300
           LRKIH SLSLSQTLI+F NQVRSSAGSRNGF   +EVTCGGNALQFY+AVRLRLLRRGLL
Sbjct: 241 LRKIHHSLSLSQTLIIFTNQVRSSAGSRNGFEHMNEVTCGGNALQFYAAVRLRLLRRGLL 300

Query: 301 KSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNF 360
           KS +K  GLAVGVQVVKNKLAPPMKMAEL +HFGRGL CESEVLELGCEHGVIL+DGSNF
Sbjct: 301 KSDDKVTGLAVGVQVVKNKLAPPMKMAELGIHFGRGLWCESEVLELGCEHGVILQDGSNF 360

Query: 361 HIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE 400
           HIEG ICSSKHEAEQYLMENED+LHK+VEILRNQLFV+E
Sbjct: 361 HIEGRICSSKHEAEQYLMENEDVLHKMVEILRNQLFVQE 381

[Close]

BLAST of Sed0006306 vs. NCBI nr
Match: XP_023544350.1 (DNA repair protein recA homolog 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634.8 bits (1636), Expect = 5.0e-178
Identity = 326/400 (81.50%), Postives = 362/400 (90.50%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQ-KGRRDVIRCLEMDACHFSSLVDVSEFE 60
           M  F +PS+FRS  LKHF A   SSLF+++R+ KGRRDV+ CL +DACHFSSLVDVSEFE
Sbjct: 1   MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 60

Query: 61  CDKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALG 120
           CDKL +DTR TEKDA LR A++QLAG+FGKESMLCLQRFFSSR APVISTGS+KLDLALG
Sbjct: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120

Query: 121 IGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVD 180
           IGGLPKGR++E+YGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+SLAE+MG+NVD
Sbjct: 121 IGGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 180

Query: 181 NLLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMT 240
           NLLISP D+AENLLC+++TLVKSGSVDVIVVDSVAALVPQ ELDAL+GS  +DVQSRVMT
Sbjct: 181 NLLISPPDTAENLLCAVDTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 240

Query: 241 QALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRG 300
           +ALRKIH SLSLSQTLIVFINQVRSS G+R GFG+ +EVTCGGNALQFY+AVRLRLLRRG
Sbjct: 241 RALRKIHYSLSLSQTLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAVRLRLLRRG 300

Query: 301 LLKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGS 360
           LLKS +K  GLAV VQVVKNKLA  MK AEL + FG+GLCCESEVLELGCEHGVILKDG+
Sbjct: 301 LLKSDDKVTGLAVAVQVVKNKLATSMKTAELGIRFGKGLCCESEVLELGCEHGVILKDGN 360

Query: 361 NFHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           NF IEG ICSSKHEA QYLMENED+L KVVEILRNQLFV+
Sbjct: 361 NFRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 400

[Close]

BLAST of Sed0006306 vs. NCBI nr
Match: XP_022928640.1 (DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 632.9 bits (1631), Expect = 1.9e-177
Identity = 324/399 (81.20%), Postives = 359/399 (89.97%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M  F + S+FRS  LKHF     SSLF+++R K RRDVI CL +DACHFSSLVDVSEFEC
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHKRRRDVINCLGLDACHFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DKL +DTR TEKDA LR A++QLAG+FGKESMLCLQRFFSSR APVISTGS+KLDLALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR++EIYGQEASGK+TLALHIIKEAQKLGGYCAYFDAENAMD+SLAE+MG+NVDN
Sbjct: 121 GGLPKGRIVEIYGQEASGKSTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP D+AENLLC++NTLVKSGSVDVIVVDSVAALVPQ ELDAL+GS  +DVQSRVMT+
Sbjct: 181 LLISPPDTAENLLCAVNTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKIH SLSLS+TLIVFINQVRSS G+R GFG+ +EVTCGGNALQFY+AVRLRLLRRGL
Sbjct: 241 ALRKIHYSLSLSETLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAVRLRLLRRGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKS +K  GLAV VQVVKNKLA  MK AELR+ FG+GLCCESEVLELGCEHGVILKDG+N
Sbjct: 301 LKSDDKVTGLAVAVQVVKNKLATSMKTAELRIRFGKGLCCESEVLELGCEHGVILKDGNN 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           F IEG ICSSK+EA QYLMENED+L KVVEILRNQLFV+
Sbjct: 361 FRIEGRICSSKYEAHQYLMENEDVLCKVVEILRNQLFVQ 399

[Close]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot
Match: Q8RY99 (DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 3.1e-122
Identity = 230/364 (63.19%), Postives = 278/364 (76.37%), Query Frame = 0


Query: 34  GRRDVIRCLEMDACHFSSLVDVSEFECDKLYEDTR-TEKDATLRHAISQLAGDFGKESML 93
           GRR V+ C   +  + SSLV+ S+ E D++ +D +  EKD  L  A+SQL+GDF K+S L
Sbjct: 24  GRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSGDFDKDSKL 83

Query: 94  CLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKL 153
            LQRF+  R   VISTGS+ LDLALG+GGLPKGRM+E+YG+EASGKTTLALHIIKEAQKL
Sbjct: 84  SLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQKL 143

Query: 154 GGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAENLLCSINTLVKSGSVDVIVVDSV 213
           GGYCAY DAENAMD SLAES+GVN + LLIS   SAE +L  ++ L KSGSVDVIVVDSV
Sbjct: 144 GGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDSV 203

Query: 214 AALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFG 273
           AAL PQCELDA VG  +RD QSR+MTQALRKIH S+  SQTLIVF+NQVRS   S   F 
Sbjct: 204 AALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHFP 263

Query: 274 RKDEVTCGGNALQFYSAVRLRLLRRGLLKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLH 333
             +EVTCGGNAL F++A+RL+++R GL+K+  K  GL V VQVVKNKLAP  K +EL +H
Sbjct: 264 HAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGIH 323

Query: 334 FGRGLCCESEVLELGCEHGVILKDGSNFHIEGMICSSKHEAEQYLMENEDILHKVVEILR 393
           FG G   E EVLEL CEHGVIL++G+++ IEG +   K  AE+YL+EN++ L  VV ILR
Sbjct: 324 FGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAILR 383

Query: 394 NQLF 397
           NQLF
Sbjct: 384 NQLF 387

[Close]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-92
Identity = 171/335 (51.04%), Postives = 243/335 (72.54%), Query Frame = 0


Query: 65  EDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPK 124
           E+  ++K+  L+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPK
Sbjct: 52  EEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK 111

Query: 125 GRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISP 184
           GR++EIYG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+++GVN +NLL+S 
Sbjct: 112 GRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQ 171

Query: 185 QDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKI 244
            D  E  L  ++TL++SGSVDVIVVDSVAALVP+ EL+  +G +H  +Q+R+M+QALRK+
Sbjct: 172 PDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKL 231

Query: 245 HQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKSGE 304
             SLSLSQTL++FINQVRS   +  GFG   EVTCGGNAL+FY+++RL + R GL+K GE
Sbjct: 232 SHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGE 291

Query: 305 KAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFHIEG 364
           +  G  V V++VKNKLAPP + A+  L FG+G+C  +E+++L  +H  I K+G+ +++ G
Sbjct: 292 ETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNG 351

Query: 365 MICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE 400
                K   +++L +NE    ++++ L+++L   E
Sbjct: 352 KNYHGKEALKRFLKQNESDQEELMKKLQDKLIADE 386

[Close]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot
Match: A5FXB8 (Protein RecA OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=recA PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.7e-75
Identity = 154/326 (47.24%), Postives = 219/326 (67.18%), Query Frame = 0


Query: 70  EKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIE 129
           EK+  L  A++Q+   FGK S++ +     S    VISTGS+ LDLALGIGGLP+GR+IE
Sbjct: 2   EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61

Query: 130 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAE 189
           IYG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GV+VDNLLIS  D+ E
Sbjct: 62  IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121

Query: 190 NLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLS 249
             L   +TLV+SG++DV+VVDSVAALVP+ EL+  +G SH  + +R+M+QALRK+  S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181

Query: 250 LSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKSGEKAIGL 309
            S+TL++F+NQ+R   G   G     E T GGNAL+FY+++R+ + R G +K  E+  G 
Sbjct: 182 RSKTLVIFLNQIRLKIGVMFG---NPETTTGGNALKFYASIRMDIRRIGSIKDREEVTGN 241

Query: 310 AVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFHIEGM-ICS 369
              V+VVKNKLAPP +  E  + +G G+    E+L+LG + G++ K G+ F  +   I  
Sbjct: 242 QTRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQ 301

Query: 370 SKHEAEQYLMENEDILHKVVEILRNQ 395
            +  A+Q+L +N D+   + + +R Q
Sbjct: 302 GRENAKQFLRDNPDVAASIEQRIRAQ 324

[Close]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot
Match: Q3ST50 (Protein RecA OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=recA PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 151/332 (45.48%), Postives = 219/332 (65.96%), Query Frame = 0


Query: 62  KLYEDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGG 121
           ++ E +  +K   L  A+SQ+   FGK S++ L +   S    VIS+GS+ LD+ALG+GG
Sbjct: 7   RIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGG 66

Query: 122 LPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLL 181
           LPKGR++E+YG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GVNVD+LL
Sbjct: 67  LPKGRIVEVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLL 126

Query: 182 ISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQAL 241
           IS  D  E  L   +TLV+SG+VDV+++DSVAALVP+ EL+  +G +   +Q+R+M+QAL
Sbjct: 127 ISQPDHGEQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQAL 186

Query: 242 RKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLK 301
           RK+  S++ S T+++FINQ+R   G   G     E T GGNAL+FY++VRL + R G +K
Sbjct: 187 RKLTASINKSNTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIK 246

Query: 302 SGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFH 361
             ++ +G    V+VVKNKLAPP K  E  + +G G+    E+L+LG + G++ K G+ F 
Sbjct: 247 ERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFS 306

Query: 362 IEGM-ICSSKHEAEQYLMENEDILHKVVEILR 393
            +   +   +  A+ +L  N DI  KV   +R
Sbjct: 307 YDSQRMGQGRENAKAFLRANPDITAKVEMAIR 335

[Close]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot
Match: Q89I84 (Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=recA PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.1e-74
Identity = 150/332 (45.18%), Postives = 218/332 (65.66%), Query Frame = 0


Query: 62  KLYEDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGG 121
           ++ E +  +K   L  A+SQ+   FGK S++ L +   S     +S+GS+ LD+ALGIGG
Sbjct: 7   RIVEGSSMDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGG 66

Query: 122 LPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLL 181
           LPKGR++EIYG E+SGKTTLALH + EAQK GG CA+ DAE+A+D   A  +GVN+D LL
Sbjct: 67  LPKGRVVEIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELL 126

Query: 182 ISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQAL 241
           IS  D+ E  L   +TLV+SG+VDV+VVDSVAALVP+ EL+  +G +   +Q+R+M+QAL
Sbjct: 127 ISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQAL 186

Query: 242 RKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLK 301
           RK+  S++ S T+++FINQ+R   G   G     E T GGNAL+FY++VRL + R G +K
Sbjct: 187 RKLTASINKSHTMVIFINQIRMKIGVMYG---SPETTTGGNALKFYASVRLDIRRIGAIK 246

Query: 302 SGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFH 361
             ++ +G    V+VVKNKLAPP K  E  + +G G+    E+L+LG + G++ K G+ F 
Sbjct: 247 ERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFS 306

Query: 362 IEGM-ICSSKHEAEQYLMENEDILHKVVEILR 393
            +   +   +  ++ +L  N DI  K+   +R
Sbjct: 307 YDSQRLGQGRENSKAFLKANPDITAKIETAIR 335

[Close]

BLAST of Sed0006306 vs. ExPASy TrEMBL
Match: A0A6J1DKH3 (DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021317 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180
Identity = 329/399 (82.46%), Postives = 360/399 (90.23%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M+ F  PSL RS H+ +F     SSLFHSLRQKGR DVI CL M+A HFSSLVDVSEFEC
Sbjct: 1   MAFFLKPSLLRSSHVNYFRPSRLSSLFHSLRQKGRTDVIGCLGMNAHHFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DKLY+DTR T+KDA LR AISQL+GDFG+ESML LQ+FF SRYAPVISTGS+KLDLALGI
Sbjct: 61  DKLYDDTRTTKKDAALRLAISQLSGDFGEESMLSLQKFFGSRYAPVISTGSLKLDLALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR+IEIYG+EASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+SLAESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGREASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSLAESMGVNVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP DSAENLLC++NTLVKSGSVDVIVVDSVAALVPQCELD+L+GS   DVQSRVMT+
Sbjct: 181 LLISPPDSAENLLCAVNTLVKSGSVDVIVVDSVAALVPQCELDSLIGSPQTDVQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKI+ S+S SQTLIVFINQVRSSAGSR+GFG  DEVTCGGNALQFY+AVRLRL+R GL
Sbjct: 241 ALRKIYHSVSQSQTLIVFINQVRSSAGSRDGFGHMDEVTCGGNALQFYAAVRLRLVRMGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKS +K  GLA+GVQVVKNKLA PMKMAE+ +HFGRG CCESEVLE+GCEHGVILKDG  
Sbjct: 301 LKSEDKVTGLAIGVQVVKNKLAAPMKMAEMGIHFGRGFCCESEVLEMGCEHGVILKDGGI 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           FHIEG ICSSKHEAEQYLMENE +L+KVVEILRNQLFV+
Sbjct: 361 FHIEGRICSSKHEAEQYLMENEAVLNKVVEILRNQLFVQ 399

[Close]

BLAST of Sed0006306 vs. ExPASy TrEMBL
Match: A0A6J1ES72 (DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435486 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 9.2e-178
Identity = 324/399 (81.20%), Postives = 359/399 (89.97%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M  F + S+FRS  LKHF     SSLF+++R K RRDVI CL +DACHFSSLVDVSEFEC
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHKRRRDVINCLGLDACHFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DKL +DTR TEKDA LR A++QLAG+FGKESMLCLQRFFSSR APVISTGS+KLDLALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR++EIYGQEASGK+TLALHIIKEAQKLGGYCAYFDAENAMD+SLAE+MG+NVDN
Sbjct: 121 GGLPKGRIVEIYGQEASGKSTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP D+AENLLC++NTLVKSGSVDVIVVDSVAALVPQ ELDAL+GS  +DVQSRVMT+
Sbjct: 181 LLISPPDTAENLLCAVNTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKIH SLSLS+TLIVFINQVRSS G+R GFG+ +EVTCGGNALQFY+AVRLRLLRRGL
Sbjct: 241 ALRKIHYSLSLSETLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAVRLRLLRRGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKS +K  GLAV VQVVKNKLA  MK AELR+ FG+GLCCESEVLELGCEHGVILKDG+N
Sbjct: 301 LKSDDKVTGLAVAVQVVKNKLATSMKTAELRIRFGKGLCCESEVLELGCEHGVILKDGNN 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           F IEG ICSSK+EA QYLMENED+L KVVEILRNQLFV+
Sbjct: 361 FRIEGRICSSKYEAHQYLMENEDVLCKVVEILRNQLFVQ 399

[Close]

BLAST of Sed0006306 vs. ExPASy TrEMBL
Match: A0A6J1HRU9 (DNA repair protein recA homolog 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467217 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.6e-177
Identity = 323/399 (80.95%), Postives = 358/399 (89.72%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M  F +PS+FRS  LK+F A   SSLF+++R KGRRDVI C  +DACHFSSLVDVSEFEC
Sbjct: 1   MPFFLAPSVFRSCRLKYFEATRLSSLFYAIRHKGRRDVISCFGLDACHFSSLVDVSEFEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           DKL +DTR TEKDA LR A++QLAG+FGKESMLCLQRFFSSR APVISTGS+KLDLALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR++E+YGQEASGKTTLALHIIKEAQKLGG+CAYFDAENAMD+SLAE+MG+NVDN
Sbjct: 121 GGLPKGRIVELYGQEASGKTTLALHIIKEAQKLGGFCAYFDAENAMDMSLAEAMGINVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP D+AENLLC++NTLVKSGSVDVIVVDSVAALVPQ ELDAL+GS  +DVQSRVMT+
Sbjct: 181 LLISPPDTAENLLCAVNTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMTR 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKIH SLSLSQTLIVF NQVRSS G+   FG+ +EVTCGGNALQFY+AVRLRLLRRGL
Sbjct: 241 ALRKIHHSLSLSQTLIVFTNQVRSSGGAWGDFGQMNEVTCGGNALQFYAAVRLRLLRRGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKSG+K  GLAV VQVVKNKLA  MK AEL +HFG+GLCCESEVLELGCEHGVI KDG+N
Sbjct: 301 LKSGDKVTGLAVAVQVVKNKLATSMKTAELGIHFGKGLCCESEVLELGCEHGVIHKDGNN 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           F IEG ICSSKHEA QYLMENED+L KVVEILRNQLFV+
Sbjct: 361 FRIEGRICSSKHEAHQYLMENEDVLCKVVEILRNQLFVQ 399

[Close]

BLAST of Sed0006306 vs. ExPASy TrEMBL
Match: A0A6J1ELF3 (DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435486 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 6.0e-177
Identity = 325/400 (81.25%), Postives = 360/400 (90.00%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLR-QKGRRDVIRCLEMDACHFSSLVDVSEFE 60
           M  F + S+FRS  LKHF     SSLF+++R QK RRDVI CL +DACHFSSLVDVSEFE
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHQKRRRDVINCLGLDACHFSSLVDVSEFE 60

Query: 61  CDKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALG 120
           CDKL +DTR TEKDA LR A++QLAG+FGKESMLCLQRFFSSR APVISTGS+KLDLALG
Sbjct: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120

Query: 121 IGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVD 180
           IGGLPKGR++EIYGQEASGK+TLALHIIKEAQKLGGYCAYFDAENAMD+SLAE+MG+NVD
Sbjct: 121 IGGLPKGRIVEIYGQEASGKSTLALHIIKEAQKLGGYCAYFDAENAMDMSLAEAMGINVD 180

Query: 181 NLLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMT 240
           NLLISP D+AENLLC++NTLVKSGSVDVIVVDSVAALVPQ ELDAL+GS  +DVQSRVMT
Sbjct: 181 NLLISPPDTAENLLCAVNTLVKSGSVDVIVVDSVAALVPQSELDALIGSPQKDVQSRVMT 240

Query: 241 QALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRG 300
           +ALRKIH SLSLS+TLIVFINQVRSS G+R GFG+ +EVTCGGNALQFY+AVRLRLLRRG
Sbjct: 241 RALRKIHYSLSLSETLIVFINQVRSSGGARGGFGQMNEVTCGGNALQFYAAVRLRLLRRG 300

Query: 301 LLKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGS 360
           LLKS +K  GLAV VQVVKNKLA  MK AELR+ FG+GLCCESEVLELGCEHGVILKDG+
Sbjct: 301 LLKSDDKVTGLAVAVQVVKNKLATSMKTAELRIRFGKGLCCESEVLELGCEHGVILKDGN 360

Query: 361 NFHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVK 399
           NF IEG ICSSK+EA QYLMENED+L KVVEILRNQLFV+
Sbjct: 361 NFRIEGRICSSKYEAHQYLMENEDVLCKVVEILRNQLFVQ 400

[Close]

BLAST of Sed0006306 vs. ExPASy TrEMBL
Match: A0A0A0L331 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338990 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 5.8e-172
Identity = 320/400 (80.00%), Postives = 351/400 (87.75%), Query Frame = 0


Query: 1   MSLFYSPSLFRSRHLKHFGAPSFSSLFHSLRQKGRRDVIRCLEMDACHFSSLVDVSEFEC 60
           M  F S SLFR   LKHF    FSSL HSL Q GRRDVI  + +DACHFSSLVDV E+EC
Sbjct: 1   MPFFLSHSLFRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSLVDVWEYEC 60

Query: 61  DKLYEDTR-TEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGI 120
           D L +DT+ TEKD  L  AISQ+A DFGK+S L LQRF SSR+APVISTGS+KLD+ALGI
Sbjct: 61  DMLNDDTKTTEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGI 120

Query: 121 GGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDN 180
           GGLPKGR+IEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMD+S AESMGVNVDN
Sbjct: 121 GGLPKGRIIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDN 180

Query: 181 LLISPQDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQ 240
           LLISP  SAENLLC++NTLV+SGSVDV+VVD+VAALVPQCELDA +GSS RD + RVM Q
Sbjct: 181 LLISPPASAENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQ 240

Query: 241 ALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGL 300
           ALRKIH SL LSQTL+VFINQVR SAG +NGF +KDEVTCGGNALQFY+AVRLRLLR+GL
Sbjct: 241 ALRKIHYSLKLSQTLVVFINQVR-SAGYQNGFEQKDEVTCGGNALQFYAAVRLRLLRKGL 300

Query: 301 LKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSN 360
           LKSG+K  G+AVGVQVVKNKLA PMKM EL +HFGRG CCESEVLELGCEHGVILKDGSN
Sbjct: 301 LKSGDKVTGVAVGVQVVKNKLASPMKMVELGIHFGRGFCCESEVLELGCEHGVILKDGSN 360

Query: 361 FHIEGMICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE 400
           FHIEG ICSSKHEAEQYL+ENED+L+KVVEILRNQLFV+E
Sbjct: 361 FHIEGRICSSKHEAEQYLIENEDVLNKVVEILRNQLFVQE 398

[Close]

BLAST of Sed0006306 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 439.9 bits (1130), Expect = 2.2e-123
Identity = 230/364 (63.19%), Postives = 278/364 (76.37%), Query Frame = 0


Query: 34  GRRDVIRCLEMDACHFSSLVDVSEFECDKLYEDTR-TEKDATLRHAISQLAGDFGKESML 93
           GRR V+ C   +  + SSLV+ S+ E D++ +D +  EKD  L  A+SQL+GDF K+S L
Sbjct: 24  GRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSGDFDKDSKL 83

Query: 94  CLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKL 153
            LQRF+  R   VISTGS+ LDLALG+GGLPKGRM+E+YG+EASGKTTLALHIIKEAQKL
Sbjct: 84  SLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQKL 143

Query: 154 GGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAENLLCSINTLVKSGSVDVIVVDSV 213
           GGYCAY DAENAMD SLAES+GVN + LLIS   SAE +L  ++ L KSGSVDVIVVDSV
Sbjct: 144 GGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDSV 203

Query: 214 AALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFG 273
           AAL PQCELDA VG  +RD QSR+MTQALRKIH S+  SQTLIVF+NQVRS   S   F 
Sbjct: 204 AALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHFP 263

Query: 274 RKDEVTCGGNALQFYSAVRLRLLRRGLLKSGEKAIGLAVGVQVVKNKLAPPMKMAELRLH 333
             +EVTCGGNAL F++A+RL+++R GL+K+  K  GL V VQVVKNKLAP  K +EL +H
Sbjct: 264 HAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGIH 323

Query: 334 FGRGLCCESEVLELGCEHGVILKDGSNFHIEGMICSSKHEAEQYLMENEDILHKVVEILR 393
           FG G   E EVLEL CEHGVIL++G+++ IEG +   K  AE+YL+EN++ L  VV ILR
Sbjct: 324 FGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAILR 383

Query: 394 NQLF 397
           NQLF
Sbjct: 384 NQLF 387

[Close]

BLAST of Sed0006306 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-93
Identity = 171/335 (51.04%), Postives = 243/335 (72.54%), Query Frame = 0


Query: 65  EDTRTEKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPK 124
           E+  ++K+  L+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPK
Sbjct: 52  EEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK 111

Query: 125 GRMIEIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISP 184
           GR++EIYG EASGKTTLALH+I EAQK GG C + DAE+A+D SLA+++GVN +NLL+S 
Sbjct: 112 GRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQ 171

Query: 185 QDSAENLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKI 244
            D  E  L  ++TL++SGSVDVIVVDSVAALVP+ EL+  +G +H  +Q+R+M+QALRK+
Sbjct: 172 PDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKL 231

Query: 245 HQSLSLSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKSGE 304
             SLSLSQTL++FINQVRS   +  GFG   EVTCGGNAL+FY+++RL + R GL+K GE
Sbjct: 232 SHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGE 291

Query: 305 KAIGLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFHIEG 364
           +  G  V V++VKNKLAPP + A+  L FG+G+C  +E+++L  +H  I K+G+ +++ G
Sbjct: 292 ETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNG 351

Query: 365 MICSSKHEAEQYLMENEDILHKVVEILRNQLFVKE 400
                K   +++L +NE    ++++ L+++L   E
Sbjct: 352 KNYHGKEALKRFLKQNESDQEELMKKLQDKLIADE 386

[Close]

BLAST of Sed0006306 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-54
Identity = 130/328 (39.63%), Postives = 199/328 (60.67%), Query Frame = 0


Query: 70  EKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIE 129
           ++   L  A++ +   FGK S+  L            S+G + LDLALG GGLPKGR++E
Sbjct: 82  DRQKALEAAMNDINSSFGKGSVTRLGS-AGGALVETFSSGILTLDLALG-GGLPKGRVVE 141

Query: 130 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAE 189
           IYG E+SGKTTLALH I E QKLGG     DAE+A D + ++++GV+V+NL++   D+ E
Sbjct: 142 IYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGE 201

Query: 190 NLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLS 249
             L + + + +SG+VD+I VDSV+AL P+ E++  +G     +Q+R+M+QALRK+  + S
Sbjct: 202 MALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 261

Query: 250 LSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKS--GEKAI 309
            +   ++F+NQ+R   G   G     EVT GG AL+F+++VRL +   G +KS  G++ I
Sbjct: 262 KAGCTLIFLNQIRYKIGVYYG---NPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDI 321

Query: 310 GLAVGVQVVKNKLAPPMKMAELRLHFGRGLCCESEVLELGCEHGVILKDGSNFHIEGM-I 369
           GL   V+V K+K++ P K AE  + FG G+     VL+      V++K GS +  E   +
Sbjct: 322 GLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRL 381

Query: 370 CSSKHEAEQYLMEN---EDILHKVVEIL 392
              + +A Q+L EN   +D + K V +L
Sbjct: 382 GQGREKALQHLRENPALQDEIEKKVRLL 404

[Close]

BLAST of Sed0006306 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-51
Identity = 113/212 (53.30%), Postives = 145/212 (68.40%), Query Frame = 0


Query: 94  LQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIEIYGQEASGKTTLALHIIKEAQKLG 153
           L R  S R  PV STGS  LD+ALG+GGLPKGR++EIYG EASGKT LALH++       
Sbjct: 3   LSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHML------- 62

Query: 154 GYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAENLLCSINTLVKSGSVDVIVVDSVA 213
                      +  SLA+++GVN +NLL+S  D  +  L  ++TL++SGSVDVIVVDSVA
Sbjct: 63  --------SMLLIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVA 122

Query: 214 ALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLSLSQTLIVFINQVRSSAGSRNGFGR 273
           ALVP+ ELD  +G +H  +Q+R+M+QALRK   SL LSQTL++FINQVR        FG 
Sbjct: 123 ALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER------FGG 182

Query: 274 KDEVTCGGNALQFYSAVRLRLLRRGLLKSGEK 306
             EVT GGNAL+FY+ +RL + R GL+K GE+
Sbjct: 183 PTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193

[Close]

BLAST of Sed0006306 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-48
Identity = 110/261 (42.15%), Postives = 166/261 (63.60%), Query Frame = 0


Query: 70  EKDATLRHAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSVKLDLALGIGGLPKGRMIE 129
           ++   L  A++ +   FGK S+  L            S+G + LDLALG GGLPKGR++E
Sbjct: 82  DRQKALEAAMNDINSSFGKGSVTRLGS-AGGALVETFSSGILTLDLALG-GGLPKGRVVE 141

Query: 130 IYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDISLAESMGVNVDNLLISPQDSAE 189
           IYG E+SGKTTLALH I E QKLGG     DAE+A D + ++++GV+V+NL++   D+ E
Sbjct: 142 IYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGE 201

Query: 190 NLLCSINTLVKSGSVDVIVVDSVAALVPQCELDALVGSSHRDVQSRVMTQALRKIHQSLS 249
             L + + + +SG+VD+I VDSV+AL P+ E++  +G     +Q+R+M+QALRK+  + S
Sbjct: 202 MALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 261

Query: 250 LSQTLIVFINQVRSSAGSRNGFGRKDEVTCGGNALQFYSAVRLRLLRRGLLKS--GEKAI 309
            +   ++F+NQ+R   G   G     EVT GG AL+F+++VRL +   G +KS  G++ I
Sbjct: 262 KAGCTLIFLNQIRYKIGVYYG---NPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDI 321

Query: 310 GLAVGVQVVKNKLAPPMKMAE 329
           GL   V+V K+K++ P K  E
Sbjct: 322 GLRARVRVQKSKVSRPYKQEE 337

The following BLAST results are available for this feature:

BLAST of Sed0006306 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883413.1	6.3e-189	87.00	DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida]	[more]
XP_022153914.1	3.1e-180	82.46	DNA repair protein recA homolog 2, mitochondrial isoform X1 [Momordica charantia...	[more]
XP_038883414.1	2.9e-178	83.71	DNA repair protein recA homolog 2, mitochondrial isoform X2 [Benincasa hispida]	[more]
XP_023544350.1	5.0e-178	81.50	DNA repair protein recA homolog 2, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022928640.1	1.9e-177	81.20	DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0006306 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY99	3.1e-122	63.19	DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9ZUP2	1.5e-92	51.04	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
A5FXB8	3.7e-75	47.24	Protein RecA OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=recA PE=3 SV=1	[more]
Q3ST50	1.4e-74	45.48	Protein RecA OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
Q89I84	4.1e-74	45.18	Protein RecA OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / I...	[more]

BLAST of Sed0006306 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKH3	1.5e-180	82.46	DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Momordica charant...	[more]
A0A6J1ES72	9.2e-178	81.20	DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1HRU9	1.6e-177	80.95	DNA repair protein recA homolog 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ELF3	6.0e-177	81.25	DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucurbita moschat...	[more]
A0A0A0L331	5.8e-172	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338990 PE=3 SV=1	[more]

BLAST of Sed0006306 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10140.1	2.2e-123	63.19	RECA homolog 3	[more]
AT2G19490.1	1.1e-93	51.04	recA DNA recombination family protein	[more]
AT1G79050.1	2.8e-54	39.63	recA DNA recombination family protein	[more]
AT3G32920.1	2.3e-51	53.30	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G79050.2	5.2e-48	42.15	recA DNA recombination family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 313..342 score: 46.12 coord: 160..189 score: 49.47 coord: 194..223 score: 54.92 coord: 232..261 score: 46.46 coord: 280..308 score: 49.27 coord: 366..383 score: 28.45
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 70..390 e-value: 1.7E-101 score: 337.7
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 75..337 e-value: 4.2E-87 score: 292.0
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 27..397
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 124..284 e-value: 0.0022 score: 27.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 102..399 e-value: 1.8E-93 score: 315.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 76..337
None	No IPR available	PANTHER	PTHR45900:SF4	DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL	coord: 27..397
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 271..342 score: 20.89348
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 102..261 score: 27.134705

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006306.1	Sed0006306.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding