Sed0006275 (gene) Chayote v1

Overview


Name	Sed0006275
Type	gene
Organism	Sechium edule (Chayote v1)
Description	mitochondrial import inner membrane translocase subunit TIM10
Location	LG01: 8508934 .. 8511486 (-)
RNA-Seq Expression	Sed0006275
Synteny	Sed0006275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGGCTGTGGACAAGGATCAGGTTGATTTCTATGGATTTTATTCGTTTTCTTTACATTTCTACAGATTCATAGCCGCTATTTGGATTTAGTATATCGAGGTCATCCCATATCAGTGTTCTTGTTCTGGTTTTTTCACCAATTTGGACAAATAATTGTTAGGGCCGAGACGGATCGAGATGATTAGTCTGGTGATTTTAACCACGTTTGAAGGAATGAGTGCTATCTATTCTGCCCACCTACAAATGATTTCTTGAATTATATTAATAATCAAGTTTTTGTAGTGTCAAATGTTTATCTAGTGAGAATAGTTGAGATGTGCCTAAACTCGTTTGAATATCTATAGATGAAAAAATTGTTAAGGCATGAGATATAGAGATGATTGTATATTAAAATTTTCATTAATTGAATGAAAGCCTCTCATTAAGCAGCTAGTTTTAACCTTTAATCTGTTACTGAACTCTATTCATTTAGAGCGTGAATATGTTCATTATATTAGCTTTTGATGAATCTTTGTTCATTACATATATCTAAATTGCAGCTCGCAAATCCATATTTATCATCACAATTTGATTTCAATGTTTTTTCATTCGAGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTAGGTTATATTACATCTTTTCTTTCACCCTTTTAATGAAAATATTTGGCAAACAAGAGATGCATAAAAGCTCTTTCATTGGAAAAAGTTAATTTTCTTTTATTCTAATAACATTATTATGGGGCTGATTCGATATGCACTGTTCAATTGATATATCTGAGCTCGTGCTTCTACCTTCGTCATAGAATTTAATCACTATGCCTTGGTTTTTGTTTTATTGTCTTTCAGGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGGTAAGATATTTACTCTACATTTCTATCTTTTCTGATGTTGCATATTTTCTGATCATGGAGCTCAATTTGTTAAGGCTGTAGTTTTTGCACTAACAATGGCTATCTATTTTAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTAAGTGATTTTTACCTCTTGATTCTTGCTCTATATGCCTTTTAGTTTATGAGATATGTGATGATCAATTATTTCAGTAGCACTTGTAGGGTCAAATGATATGAACCCTCGCGGATATTAAAAAAATAAAAATAAGTAGTACAGTAGCACTTGTGCTCCATCTGATTAAAAAACAACAGCTCATGCTCTGCCGTGATTGGAAGTAAAAAGACAACTTCATTAAGCTCATTTTTAATCACGGGGTTGTTATTTGCACATGTCTAAAGGTCATGTTTAATAGAAACACTTTAGTCTTTAAATGGGTTTTCTTGACATCCAAATGTTGTAAGCAGTATTTTAAAAAGCGCAAGGTGTACTAAGGCGCAATGATTCTTTCGAGCTTGAGGTGCACGACGCACCAAAAGGCGAGTTTTTTTTTTTACTTTAGGCGCACTATATAAAAAAACACAAAAAACTTATGTGTGTATACACAATAAAAACACTTTTCATGGACATAAATGAAGTTTTAACCAAGAATCATATATAAAGCATACATAATATTCAATTATCAACCTTCACGCGCTTCGAATGACCTAGTATGAAGATTTAAAGCACAAAAAGCGCAAAGGAAATAAAAAATTTCATGAGGCACGCGCCTTTTGGCGCCCGGGGCTTCACGTTAGGCGCCATAAGGCGTGCGACTTGAGTGCGACTTTTAAAATACTAGTTGTAAGGGTCTAAGTGATATGTCCCGTGGCATTAGTCGAGGTATGTGCAAACTAGTTCGGACAGTCACGTATATACAAAAAAAAGCACACATGTAGTCTTTGTGCTATTATTTGAGGGGAAAGAAACAATAGGATTTTTAGGACTGAGAGACCTTCATAGTCCCTTGTTTGATATCTTTTTTCTCTTTGAATGACCGTGTGTAAGTTTTTTATAATAAGCACTTTTTCTACGCATTGATGGAAACTCTTGCATAGATAAATTGTTTTCCCATCTTTTTCTAAATTGATATTTCATGATTAAGGTGCTACCGAAGTTTCTAAATTGATATTTGTAATTACCCTTCAAGATTTATTTTACTTTATTGGACTTCCTTTTTTGTTCGGGAACTATACATTCGAGACACCCGCACTCCTTCCTAGGCCGAACCACCTGATAGATAACAAGAGATTTATTTTATAATCAAACTTCATTGGATTTCGTTCATTAGGGTGTTTCTTGCAATACCCGCATTTTCTTTCTTTTTATCCCAATAAAAGTATTGGCTTTTTCACTTTCTAAAAAATGGTTAAGATAGCATAGTATTGACTTCTTCAATGAGCTTATTTACGATAAAAGGTCTTTGGTCGAACTTGCAACATCCTTTAATGATGTTTTTTGTATTTAGTTGTGTTATTCATTCATACTTTTGCTATGCTTCAGGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA

mRNA sequence

ATGGCATCGGCTGTGGACAAGGATCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA

Coding sequence (CDS)

ATGGCATCGGCTGTGGACAAGGATCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA

Protein sequence

MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGTGR

Homology

[Close]

BLAST of Sed0006275 vs. NCBI nr
Match: XP_038894964.1 (mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida])

HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 60
          M SAVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK
Sbjct: 7  MPSAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 66

Query: 61 YWHVTNLVGQLLGTGR 77
          YWHVTNL+GQLLG+GR
Sbjct: 67 YWHVTNLIGQLLGSGR 82

[Close]

BLAST of Sed0006275 vs. NCBI nr
Match: XP_022949393.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949394.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949395.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949396.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022998286.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998287.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998288.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998289.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_023522055.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023522057.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023522058.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023524949.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo] >XP_023524950.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo] >XP_023524951.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 3  SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
          +AVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW
Sbjct: 8  TAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 67

Query: 63 HVTNLVGQLLGTGR 77
          HVTNL+GQLLG+GR
Sbjct: 68 HVTNLIGQLLGSGR 81

[Close]

BLAST of Sed0006275 vs. NCBI nr
Match: KAG7036963.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 3   SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
           +AVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW
Sbjct: 48  TAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 107

Query: 63  HVTNLVGQLLGTGR 77
           HVTNL+GQLLG+GR
Sbjct: 108 HVTNLIGQLLGSGR 121

[Close]

BLAST of Sed0006275 vs. NCBI nr
Match: KAG6607285.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 3   SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
           +AVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW
Sbjct: 51  TAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 110

Query: 63  HVTNLVGQLLGTGR 77
           HVTNL+GQLLG+GR
Sbjct: 111 HVTNLIGQLLGSGR 124

[Close]

BLAST of Sed0006275 vs. NCBI nr
Match: XP_004145269.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] >XP_008457418.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumis melo] >KGN65773.1 hypothetical protein Csa_023233 [Cucumis sativus] >TYJ97353.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 60
          M SAVDK+QIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVSK
Sbjct: 7  MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSK 66

Query: 61 YWHVTNLVGQLLGTGR 77
          YWHVTNL+GQLLG+GR
Sbjct: 67 YWHVTNLIGQLLGSGR 82

[Close]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q9ZW33 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.2e-28
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 5  VDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 64
          V K+Q F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V
Sbjct: 9  VTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQV 68

Query: 65 TNLVGQLLGTGR 77
            +VGQLL  G+
Sbjct: 69 NGMVGQLLSAGK 80

[Close]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q9W2D6 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster OX=7227 GN=Tim10 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-11
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 3  SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
          S  D+ ++  M E E+E   +L+N++T++C  KC+  RY ESEL  GE  CIDRCV+KY 
Sbjct: 7  STADQAKLQLMQEMEIEMMSDLYNRMTNACHKKCIPPRYSESELGKGEMVCIDRCVAKYL 66

Query: 63 HVTNLVGQLL 73
           +   +G+ L
Sbjct: 67 DIHEKIGKKL 76

[Close]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: P87108 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM10 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.0e-11
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 14 AEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQ 71
          AE E++   ++FNKL ++C+ KC++  Y E ELN  E+SC+DRCV+KY+     VG+
Sbjct: 22 AEAELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKYFETNVQVGE 78

[Close]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q2NKR1 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Bos taurus OX=9913 GN=TIMM10 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 14 AEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLL 73
          AE E+E   +++N++T +C  KCV   YKE+EL+ GE+ C+DRCVSKY  +   +G+ L
Sbjct: 11 AELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKL 69

[Close]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: P62072 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Homo sapiens OX=9606 GN=TIMM10 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 14 AEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLL 73
          AE E+E   +++N++T +C  KCV   YKE+EL+ GE+ C+DRCVSKY  +   +G+ L
Sbjct: 11 AELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKL 69

[Close]

BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A6J1KDY1 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita maxima OX=3661 GN=LOC111492968 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.2e-35
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 3  SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
          +AVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW
Sbjct: 8  TAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 67

Query: 63 HVTNLVGQLLGTGR 77
          HVTNL+GQLLG+GR
Sbjct: 68 HVTNLIGQLLGSGR 81

[Close]

BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A6J1GBZ5 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucurbita moschata OX=3662 GN=LOC111452757 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.2e-35
Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 3  SAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 62
          +AVDK+QIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW
Sbjct: 8  TAVDKEQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 67

Query: 63 HVTNLVGQLLGTGR 77
          HVTNL+GQLLG+GR
Sbjct: 68 HVTNLIGQLLGSGR 81

[Close]

BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A5D3BDG9 (Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001630 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 60
          M SAVDK+QIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVSK
Sbjct: 7  MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSK 66

Query: 61 YWHVTNLVGQLLGTGR 77
          YWHVTNL+GQLLG+GR
Sbjct: 67 YWHVTNLIGQLLGSGR 82

[Close]

BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A0A0LVG1 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527890 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 60
          M SAVDK+QIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVSK
Sbjct: 7  MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSK 66

Query: 61 YWHVTNLVGQLLGTGR 77
          YWHVTNL+GQLLG+GR
Sbjct: 67 YWHVTNLIGQLLGSGR 82

[Close]

BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A1S3C655 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX=3656 GN=LOC103497109 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSK 60
          M SAVDK+QIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVSK
Sbjct: 7  MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSK 66

Query: 61 YWHVTNLVGQLLGTGR 77
          YWHVTNL+GQLLG+GR
Sbjct: 67 YWHVTNLIGQLLGSGR 82

[Close]

BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-29
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 5  VDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 64
          V K+Q F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V
Sbjct: 9  VTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQV 68

Query: 65 TNLVGQLLGTGR 77
            +VGQLL  G+
Sbjct: 69 NGMVGQLLSAGK 80

[Close]

BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-29
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 5  VDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 64
          V K+Q F MA+ EMEYRVELFNKL  +CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V
Sbjct: 9  VTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQV 68

Query: 65 TNLVGQLLGTGR 77
            +VGQLL  G+
Sbjct: 69 NGMVGQLLSAGK 80

[Close]

BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.3 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-24
Identity = 54/96 (56.25%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 5   VDKDQIFGMAEKEMEYRVELFNK------------------------LTHSCFNKCVDKR 64
           V K+Q F MA+ EMEYRVELFN                         L  +CFNKCVDKR
Sbjct: 9   VTKEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQTCFNKCVDKR 68

Query: 65  YKESELNMGENSCIDRCVSKYWHVTNLVGQLLGTGR 77
           YKE+ELNMGENSCIDRCVSKYW V  +VGQLL  G+
Sbjct: 69  YKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGK 104

The following BLAST results are available for this feature:

BLAST of Sed0006275 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894964.1	2.6e-35	94.74	mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida...	[more]
XP_022949393.1	1.7e-34	94.59	mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschat...	[more]
KAG7036963.1	1.7e-34	94.59	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]
KAG6607285.1	1.7e-34	94.59	Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbit...	[more]
XP_004145269.1	2.2e-34	93.42	mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] ...	[more]

BLAST of Sed0006275 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW33	7.2e-28	76.39	Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis tha...	[more]
Q9W2D6	3.6e-11	42.86	Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila mela...	[more]
P87108	8.0e-11	45.61	Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces c...	[more]
Q2NKR1	2.3e-10	45.76	Mitochondrial import inner membrane translocase subunit Tim10 OS=Bos taurus OX=9...	[more]
P62072	2.3e-10	45.76	Mitochondrial import inner membrane translocase subunit Tim10 OS=Homo sapiens OX...	[more]

BLAST of Sed0006275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDY1	8.2e-35	94.59	mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita ...	[more]
A0A6J1GBZ5	8.2e-35	94.59	mitochondrial import inner membrane translocase subunit TIM10 OS=Cucurbita mosch...	[more]
A0A5D3BDG9	1.1e-34	93.42	Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis me...	[more]
A0A0A0LVG1	1.1e-34	93.42	zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52789...	[more]
A0A1S3C655	1.1e-34	93.42	mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX...	[more]

BLAST of Sed0006275 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29530.1	5.1e-29	76.39	Tim10/DDP family zinc finger protein	[more]
AT2G29530.2	5.1e-29	76.39	Tim10/DDP family zinc finger protein	[more]
AT2G29530.3	2.2e-24	56.25	Tim10/DDP family zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 13..71 e-value: 4.3E-21 score: 74.3
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 6..74 e-value: 4.0E-24 score: 85.9
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 17..72
None	No IPR available	PANTHER	PTHR11038:SF22	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10-LIKE	coord: 3..76
None	No IPR available	PANTHER	PTHR11038	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10	coord: 3..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006275.1	Sed0006275.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0008270	zinc ion binding