
Sed0006275 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCGGCTGTGGACAAGGATCAGGTTGATTTCTATGGATTTTATTCGTTTTCTTTACATTTCTACAGATTCATAGCCGCTATTTGGATTTAGTATATCGAGGTCATCCCATATCAGTGTTCTTGTTCTGGTTTTTTCACCAATTTGGACAAATAATTGTTAGGGCCGAGACGGATCGAGATGATTAGTCTGGTGATTTTAACCACGTTTGAAGGAATGAGTGCTATCTATTCTGCCCACCTACAAATGATTTCTTGAATTATATTAATAATCAAGTTTTTGTAGTGTCAAATGTTTATCTAGTGAGAATAGTTGAGATGTGCCTAAACTCGTTTGAATATCTATAGATGAAAAAATTGTTAAGGCATGAGATATAGAGATGATTGTATATTAAAATTTTCATTAATTGAATGAAAGCCTCTCATTAAGCAGCTAGTTTTAACCTTTAATCTGTTACTGAACTCTATTCATTTAGAGCGTGAATATGTTCATTATATTAGCTTTTGATGAATCTTTGTTCATTACATATATCTAAATTGCAGCTCGCAAATCCATATTTATCATCACAATTTGATTTCAATGTTTTTTCATTCGAGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTAGGTTATATTACATCTTTTCTTTCACCCTTTTAATGAAAATATTTGGCAAACAAGAGATGCATAAAAGCTCTTTCATTGGAAAAAGTTAATTTTCTTTTATTCTAATAACATTATTATGGGGCTGATTCGATATGCACTGTTCAATTGATATATCTGAGCTCGTGCTTCTACCTTCGTCATAGAATTTAATCACTATGCCTTGGTTTTTGTTTTATTGTCTTTCAGGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGGTAAGATATTTACTCTACATTTCTATCTTTTCTGATGTTGCATATTTTCTGATCATGGAGCTCAATTTGTTAAGGCTGTAGTTTTTGCACTAACAATGGCTATCTATTTTAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTAAGTGATTTTTACCTCTTGATTCTTGCTCTATATGCCTTTTAGTTTATGAGATATGTGATGATCAATTATTTCAGTAGCACTTGTAGGGTCAAATGATATGAACCCTCGCGGATATTAAAAAAATAAAAATAAGTAGTACAGTAGCACTTGTGCTCCATCTGATTAAAAAACAACAGCTCATGCTCTGCCGTGATTGGAAGTAAAAAGACAACTTCATTAAGCTCATTTTTAATCACGGGGTTGTTATTTGCACATGTCTAAAGGTCATGTTTAATAGAAACACTTTAGTCTTTAAATGGGTTTTCTTGACATCCAAATGTTGTAAGCAGTATTTTAAAAAGCGCAAGGTGTACTAAGGCGCAATGATTCTTTCGAGCTTGAGGTGCACGACGCACCAAAAGGCGAGTTTTTTTTTTTACTTTAGGCGCACTATATAAAAAAACACAAAAAACTTATGTGTGTATACACAATAAAAACACTTTTCATGGACATAAATGAAGTTTTAACCAAGAATCATATATAAAGCATACATAATATTCAATTATCAACCTTCACGCGCTTCGAATGACCTAGTATGAAGATTTAAAGCACAAAAAGCGCAAAGGAAATAAAAAATTTCATGAGGCACGCGCCTTTTGGCGCCCGGGGCTTCACGTTAGGCGCCATAAGGCGTGCGACTTGAGTGCGACTTTTAAAATACTAGTTGTAAGGGTCTAAGTGATATGTCCCGTGGCATTAGTCGAGGTATGTGCAAACTAGTTCGGACAGTCACGTATATACAAAAAAAAGCACACATGTAGTCTTTGTGCTATTATTTGAGGGGAAAGAAACAATAGGATTTTTAGGACTGAGAGACCTTCATAGTCCCTTGTTTGATATCTTTTTTCTCTTTGAATGACCGTGTGTAAGTTTTTTATAATAAGCACTTTTTCTACGCATTGATGGAAACTCTTGCATAGATAAATTGTTTTCCCATCTTTTTCTAAATTGATATTTCATGATTAAGGTGCTACCGAAGTTTCTAAATTGATATTTGTAATTACCCTTCAAGATTTATTTTACTTTATTGGACTTCCTTTTTTGTTCGGGAACTATACATTCGAGACACCCGCACTCCTTCCTAGGCCGAACCACCTGATAGATAACAAGAGATTTATTTTATAATCAAACTTCATTGGATTTCGTTCATTAGGGTGTTTCTTGCAATACCCGCATTTTCTTTCTTTTTATCCCAATAAAAGTATTGGCTTTTTCACTTTCTAAAAAATGGTTAAGATAGCATAGTATTGACTTCTTCAATGAGCTTATTTACGATAAAAGGTCTTTGGTCGAACTTGCAACATCCTTTAATGATGTTTTTTGTATTTAGTTGTGTTATTCATTCATACTTTTGCTATGCTTCAGGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA ATGGCATCGGCTGTGGACAAGGATCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA ATGGCATCGGCTGTGGACAAGGATCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACACTCATGTTTTAACAAGTGTGTTGATAAGAGATACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGCATTGACCGCTGTGTTTCTAAGTATTGGCATGTGACCAATTTAGTCGGCCAGCTACTCGGCACTGGTAGATGA MASAVDKDQIFGMAEKEMEYRVELFNKLTHSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGTGR Homology
BLAST of Sed0006275 vs. NCBI nr
Match: XP_038894964.1 (mitochondrial import inner membrane translocase subunit TIM10 [Benincasa hispida]) HSP 1 Score: 158.3 bits (399), Expect = 2.6e-35 Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Sed0006275 vs. NCBI nr
Match: XP_022949393.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949394.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949395.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022949396.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita moschata] >XP_022998286.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998287.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998288.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_022998289.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima] >XP_023522055.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023522057.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023522058.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita pepo subsp. pepo] >XP_023524949.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo] >XP_023524950.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo] >XP_023524951.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Sed0006275 vs. NCBI nr
Match: KAG7036963.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Sed0006275 vs. NCBI nr
Match: KAG6607285.1 (Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34 Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Sed0006275 vs. NCBI nr
Match: XP_004145269.1 (mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus] >XP_008457418.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumis melo] >KGN65773.1 hypothetical protein Csa_023233 [Cucumis sativus] >TYJ97353.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucumis melo var. makuwa]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q9ZW33 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana OX=3702 GN=TIM10 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 7.2e-28 Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q9W2D6 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster OX=7227 GN=Tim10 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.6e-11 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: P87108 (Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM10 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.0e-11 Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: Q2NKR1 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Bos taurus OX=9913 GN=TIMM10 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy Swiss-Prot
Match: P62072 (Mitochondrial import inner membrane translocase subunit Tim10 OS=Homo sapiens OX=9606 GN=TIMM10 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A6J1KDY1 (mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucurbita maxima OX=3661 GN=LOC111492968 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 8.2e-35 Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A6J1GBZ5 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucurbita moschata OX=3662 GN=LOC111452757 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 8.2e-35 Identity = 70/74 (94.59%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A5D3BDG9 (Mitochondrial import inner membrane translocase subunit TIM10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001630 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A0A0LVG1 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527890 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Sed0006275 vs. ExPASy TrEMBL
Match: A0A1S3C655 (mitochondrial import inner membrane translocase subunit TIM10 OS=Cucumis melo OX=3656 GN=LOC103497109 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.1 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 124.0 bits (310), Expect = 5.1e-29 Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.2 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 124.0 bits (310), Expect = 5.1e-29 Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Sed0006275 vs. TAIR 10
Match: AT2G29530.3 (Tim10/DDP family zinc finger protein ) HSP 1 Score: 108.6 bits (270), Expect = 2.2e-24 Identity = 54/96 (56.25%), Postives = 60/96 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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