Sed0006265 (gene) Chayote v1

Overview


Name	Sed0006265
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SNF1-related protein kinase regulatory subunit beta-1-like
Location	LG12: 27668002 .. 27671696 (-)
RNA-Seq Expression	Sed0006265
Synteny	Sed0006265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCGGTGTCTGTATCAGATCAGAATGGCAAAATCCGTAAATAAACCAAACTCGGAGGCCATTTTTCGCTCCTCATATCAATCTAGAGAGAGAAAGTCGTCTCTCTCATCTGGTGGGGCATATCTATTCTAAACCCCATTTGTCTTCTTCTTCATCCCAAAATCAAACACAAATTCCAAATTAGGGATTCAATTTGAGGATCAAAATTTCAATCCAATTGGCCCTTACCACTAATTTCAAAGCGTTTGAATGTTGATTACGGTGCGATTCGTGGTTTAGATCGATGGGGAATGCCATTGGTCGAGAGGAGAGTTATTCCGGCGGCGGCGGCGGCGGTGGAGGAGCCGACGGCGATGGACAAGGTTCGATGAGTGAAACTTCTTCGGCTAACCGAATGAATAACGCCGTTTCTTCAGATTCCATGGGAAATACTCCTCCTGGTAGCCCTGGCAACTTCCGATCCCCGATTCTGTTCGCTCCTCAGGTCACTATTTTGTTCTTCTTCTTCCTGTAATCTTTCTTTCATGTGTTCTTTGTTTGTGTCTCTTTCTGTTCTTTTCGTTTTTTTTTTTTGTTGTTGTTCTTGTTCGTGGGGTTTGAAGACATTTCGTTTTGTTATTGGGTTTTGATTGTTGGGTGGAAGTTGTGTTTCTGGGAAGTTTCTTTGTGAAGATTGTAAATGGGAAAGTTCCATCCAAGATCCACTTCATTGACTACTTCAACTGAGAGAGATTGCCTCCCTGCAATTTTAGTAATGTTTAGTGTTTGTGTTCTTAGTTTTACTTTGAATCATTTGCTTAATGCTGTGCTTTTTGGAGATTATTGGCTGAAATGTCTGTTGGATTTGCCTACTCTGATCCATTACAGTATTTGGATGAACAGCTAGAATTTATGTCTTAATCCTGACCTCTTCAAACTATTGATTAATTTGGTTGTTGGAATCATGTGTTGATAAAAGCATTGATAGAATATATTCATGGGGTTTAGTAAGTGATGAATTGTGTTTAAACTTCCAGTTCCAGTCTTCCAGGTGTGATCTTACTGCAAATGTTTTGGTTAGATCATAAGTTGGACTTCCTTGTCTTTTGGGATCACCCAAATGTGAATTTGTATGATGAGTAGCCTTGGGTTATGGCTTTTGTAATGGTGATGGCTGTGTATTACAAGACTTGCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGTTCCAACCCTTTACAATGAAGCCTGGAAAAACGAATTCCTCGGAGCTGTAGATAATCCTCCAGAGCAAGGAATCCCGACGATCATTACTTGGAGTTACGATGGCAGAAGCGTGGCTGTTGAGGGATCTTGGGACAATTGGACATCCAGGTTATTTCTTATCACCTCCAGGCTATCTTGATTCTTTCAAGCCTCTTGCTTCATTTTGAATAAATAATGAAATGGTGTGTTGCACTGCTTCTGCAGGAAGATCCTGCAAAAGTCTGGTAAAGATTTTTCGATACTTATGGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAGCGGAGACATATTCCAGATCTTCCTTACATAGCTGATGAAATTGGCAATGTCTTTAATCTTCTCAATGTTTCTGTAAGTGTGATTCTTCCCTCCATCCGCATTACCATCCAGTCGGCATGAACTTGAACATTATTTGTGTTGAAAAACGATGCACGTGTGGTTTGTGGGAAGTGGAAATTATTGTGCAGAGTGCGAAAATACTTGCATACTACTAGGATAAATATCTGAAGTCCATGGTTTAATTCTCAGTTGCTCATGTTTATAGTTACTACCTTAATTTTGTGTGATAAATCGTTCACGAAAGAACTATTGGATGATTTTTTAAGCTCTTTTTTCACATTGTATCAGCACATAGTTGGTCTTCACTCATGTTTGTATAGATATTTAGTGACATTTTAGTTTTATGAACCTGGAAAAGGATCGAAGAAAAGAATGAGGATAGCACTCCACCTCCCATGGCTGTAGTAAAGTAATGTACAAACTCAGATACCCTAAACACTATTACTGTCTCGCGTTATAGCCATATAAGGTCCAAAAGAAAAGAGAGGGGCTGTGTTCTCACTTAAAGAGGGAAAAAAAAGAGAGAACAAAGGGGAGAGTGCTTAAACCTGTTGTCAATCCTGAATGATGCCAAAATCTCCTGGAACAAAGCCTTTTTTCCTTTTTGAACACGAATGTGATTTAGCACCATGTGCGTTAATTCCTACTATAGATTGAATTCATTACTTCTTAGTATGTGTTTTCATGCTTGACATGTTCTTACATTTTACAAATTAATTTTTTGTCGAAGTTTATTCAAAAGATACATAAAGTGTAGCGAAAATATATGGTCTAAAATAGCAGCTTTTCATGTGTCCCAACTCCAACCTAAACGAGTGTTTGAGCTAACATGTGTGCAGACAGGGTAGGAGGTTGTTGCCTTCTTACTCTTTTGGTATGTATCTATTATCTGAGTTCCCATTCTATTGACTATCACCAGAACTAAATAAATTTCTGGAACCAGAGCAAGATTATATTTTTCATTTGATACTCTGATGTTTACATTTTGTTGAAACGCCGAATGCGCTATGAGAAATGTCCAACAGTTGTCAGCATTGGTCTCCAAGTGGTGGCTCAGTGGTTGAAAACTTGGGCATTGAGGATTTGCTCCCTTCAAGGTCTCAGGTTTGAGATTCACTTGTGACATTACTTCTTCGATGTCTCCGGTGCTTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAGATTTGTCAGCATTGTTTAGAATGCATCATTAGTAGTGCAGTGCATAAGATGAACTGATTTTATGCATTTCATCTTCACTTTTCATCTTGGAGCTGTTTCCATTCTGTAGGATAGTGTGCCTGATATTCTACAAAGTGTGACCGAGTTCGAGGCTCCACCATCACCAGAGTCAACTTACAGCCAGGCATTTCCCAGCGAAGAAGACTTCGCCAAGGAGCCAGCAGCAGTGCCGTCCCAACTGCACCTCACAGTTCTAGGTATGGAAAATGCAGACGAAGCTTCGTCCTCAAAACCTCAACATGTTGTGCTTAACCACCTCTTCATGGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCACTCCAAGTATGTCACTGTCGTCCTCTACAAACCGTTGAACAGGTAGTTAGTAGTTACTGTCGATTTTTCGTATCGGACTTTGTAAAGGATTACGAGCTAAAGCACCCACCCTCCATCATCTGTGGAGGAATCTTGTTTTATAGAACTGGTTGACCAAAGTTTGCTTGCAACAAAACACTCTTAAATTCTGATCAATATTTCTTCAGTCTGTGAAGAAATCTTTGTTTCATAGAACTGCTTAGCAAGAAAGAAAAAGGTTTCATTACCTCTTACTTTAGCTGTATCAACAGTATTTTATTTAGATAGATCTGAGATAGCCTTGAATAAGCTTATGTGTTTGGCTTAATTTTGGCATTCTCTTGTGCTAGTTTCACAATTTAATTTCGTGCCAAATTTTAGAAGATAAAGTCTGTTATGAAATTGTGGATACATTATATGAGTGGTATGAGAAGTATGGGGAAGATAAAATCTCGTATGAATTGACAGTTATAAGTGGTTATGTAAAAAACTTTTGCTTGGAT

mRNA sequence

CCGGCGGTGTCTGTATCAGATCAGAATGGCAAAATCCGTAAATAAACCAAACTCGGAGGCCATTTTTCGCTCCTCATATCAATCTAGAGAGAGAAAGTCGTCTCTCTCATCTGGTGGGGCATATCTATTCTAAACCCCATTTGTCTTCTTCTTCATCCCAAAATCAAACACAAATTCCAAATTAGGGATTCAATTTGAGGATCAAAATTTCAATCCAATTGGCCCTTACCACTAATTTCAAAGCGTTTGAATGTTGATTACGGTGCGATTCGTGGTTTAGATCGATGGGGAATGCCATTGGTCGAGAGGAGAGTTATTCCGGCGGCGGCGGCGGCGGTGGAGGAGCCGACGGCGATGGACAAGGTTCGATGAGTGAAACTTCTTCGGCTAACCGAATGAATAACGCCGTTTCTTCAGATTCCATGGGAAATACTCCTCCTGGTAGCCCTGGCAACTTCCGATCCCCGATTCTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGTTCCAACCCTTTACAATGAAGCCTGGAAAAACGAATTCCTCGGAGCTGTAGATAATCCTCCAGAGCAAGGAATCCCGACGATCATTACTTGGAGTTACGATGGCAGAAGCGTGGCTGTTGAGGGATCTTGGGACAATTGGACATCCAGGAAGATCCTGCAAAAGTCTGGTAAAGATTTTTCGATACTTATGGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAGCGGAGACATATTCCAGATCTTCCTTACATAGCTGATGAAATTGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGTGTGCCTGATATTCTACAAAGTGTGACCGAGTTCGAGGCTCCACCATCACCAGAGTCAACTTACAGCCAGGCATTTCCCAGCGAAGAAGACTTCGCCAAGGAGCCAGCAGCAGTGCCGTCCCAACTGCACCTCACAGTTCTAGGTATGGAAAATGCAGACGAAGCTTCGTCCTCAAAACCTCAACATGTTGTGCTTAACCACCTCTTCATGGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCACTCCAAGTATGTCACTGTCGTCCTCTACAAACCGTTGAACAGGTAGTTAGTAGTTACTGTCGATTTTTCGTATCGGACTTTGTAAAGGATTACGAGCTAAAGCACCCACCCTCCATCATCTGTGGAGGAATCTTGTTTTATAGAACTGGTTGACCAAAGTTTGCTTGCAACAAAACACTCTTAAATTCTGATCAATATTTCTTCAGTCTGTGAAGAAATCTTTGTTTCATAGAACTGCTTAGCAAGAAAGAAAAAGGTTTCATTACCTCTTACTTTAGCTGTATCAACAGTATTTTATTTAGATAGATCTGAGATAGCCTTGAATAAGCTTATGTGTTTGGCTTAATTTTGGCATTCTCTTGTGCTAGTTTCACAATTTAATTTCGTGCCAAATTTTAGAAGATAAAGTCTGTTATGAAATTGTGGATACATTATATGAGTGGTATGAGAAGTATGGGGAAGATAAAATCTCGTATGAATTGACAGTTATAAGTGGTTATGTAAAAAACTTTTGCTTGGAT

Coding sequence (CDS)

ATGGGGAATGCCATTGGTCGAGAGGAGAGTTATTCCGGCGGCGGCGGCGGCGGTGGAGGAGCCGACGGCGATGGACAAGGTTCGATGAGTGAAACTTCTTCGGCTAACCGAATGAATAACGCCGTTTCTTCAGATTCCATGGGAAATACTCCTCCTGGTAGCCCTGGCAACTTCCGATCCCCGATTCTGTTCGCTCCTCAGGTTCCTGTAGCTCCCTTGCAAGGAGGTAATGTTCCAACCCTTTACAATGAAGCCTGGAAAAACGAATTCCTCGGAGCTGTAGATAATCCTCCAGAGCAAGGAATCCCGACGATCATTACTTGGAGTTACGATGGCAGAAGCGTGGCTGTTGAGGGATCTTGGGACAATTGGACATCCAGGAAGATCCTGCAAAAGTCTGGTAAAGATTTTTCGATACTTATGGTCCTTCCATCTGGAGTATATCATTACAAGTTCATCGTCGATGGTCAGCGGAGACATATTCCAGATCTTCCTTACATAGCTGATGAAATTGGCAATGTCTTTAATCTTCTCAATGTTTCTGATAGTGTGCCTGATATTCTACAAAGTGTGACCGAGTTCGAGGCTCCACCATCACCAGAGTCAACTTACAGCCAGGCATTTCCCAGCGAAGAAGACTTCGCCAAGGAGCCAGCAGCAGTGCCGTCCCAACTGCACCTCACAGTTCTAGGTATGGAAAATGCAGACGAAGCTTCGTCCTCAAAACCTCAACATGTTGTGCTTAACCACCTCTTCATGGAGAAAGGATGGGCTTCTCAGTCTGTGGTTGCCTTGGGACTTACTCATAGGTTCCACTCCAAGTATGTCACTGTCGTCCTCTACAAACCGTTGAACAGGTAG

Protein sequence

MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR

Homology

[Close]

BLAST of Sed0006265 vs. NCBI nr
Match: XP_022933563.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 482.3 bits (1240), Expect = 3.0e-132
Identity = 244/286 (85.31%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD DGQGS+ ++S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLPYIADE+GNVFNLLNV
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. NCBI nr
Match: KAG6588137.1 (SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131
Identity = 243/286 (84.97%), Postives = 259/286 (90.56%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD DGQG + ++S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLPYIADE+GNVFNLLNV
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. NCBI nr
Match: XP_023531782.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 243/286 (84.97%), Postives = 259/286 (90.56%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD DGQG + ++S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADADGQGPVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLPYIADE+GNVFNLLNV
Sbjct: 121 WDNWASRKSLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. NCBI nr
Match: XP_038880301.1 (SNF1-related protein kinase regulatory subunit beta-1 [Benincasa hispida])

HSP 1 Score: 476.1 bits (1224), Expect = 2.1e-130
Identity = 241/290 (83.10%), Postives = 259/290 (89.31%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGG----GGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPG 60
           MGNA GREES+ GGGGG    GG A+ D Q    ++S  +  +N VSSDSMGNTPP SPG
Sbjct: 1   MGNANGREESFPGGGGGPPAAGGRANVDVQSPAIDSSVTSETSNVVSSDSMGNTPPHSPG 60

Query: 61  NFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVA 120
            FRSPILFAPQVPVAPLQGGN PT YNEAW+NEF GA+DNPPEQGIPTIITWSY G SVA
Sbjct: 61  KFRSPILFAPQVPVAPLQGGNGPTHYNEAWQNEFGGAIDNPPEQGIPTIITWSYGGNSVA 120

Query: 121 VEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFN 180
           VEGSWDNWTSRK LQ++GKDFS+L+VLPSGVYHYKFIVDGQRR+IPDLP+IADE+GNVFN
Sbjct: 121 VEGSWDNWTSRKTLQRTGKDFSLLLVLPSGVYHYKFIVDGQRRYIPDLPFIADEMGNVFN 180

Query: 181 LLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENAD 240
           LLNVSDSVPDILQSV EFE P SPE+TYSQ FPS+EDFAKEPAAVPSQLHLTVLGMEN D
Sbjct: 181 LLNVSDSVPDILQSVAEFEPPQSPETTYSQTFPSDEDFAKEPAAVPSQLHLTVLGMENTD 240

Query: 241 EASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           EASSSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 EASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 290

[Close]

BLAST of Sed0006265 vs. NCBI nr
Match: XP_022967978.1 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-130
Identity = 242/286 (84.62%), Postives = 258/286 (90.21%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD  GQG +  +S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRKILQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLP+IADE+GNVFNLLNV
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-90
Identity = 172/286 (60.14%), Postives = 211/286 (73.78%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA G++E  + G GG        + +  + S+ +R +   SSDSM ++PPGSP    S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSR-HRRPSSDSMSSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           P LFAPQVPVAPLQ  N P   N  W N+     DNPPEQGIPTIITW+  G  VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQKSGKD SIL VLPSG+YHYK IVDG+ ++IPDLP++ADE+GNV N+L+V
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
            + VP+  +S+ EFEAPPSP+ +Y Q  P+ ED+AKEP AVP QLHLT+LG    + A +
Sbjct: 181 HNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIA 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           +KPQHVVLNH+F+E+GW  QS+VALGLTHRF SKY+TVVLYKPL R
Sbjct: 241 TKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-67
Identity = 142/290 (48.97%), Postives = 188/290 (64.83%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGN   REE+ S         D +   S    S+A+  N+    + MG +PP SP   +S
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAE-ICSREAMSAASDGNHVAPPELMGQSPPHSPRATQS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPP-EQGIPTIITWSYDGRSVAVEG 120
           P++FAPQVPV PLQ  +   + N +W        +    EQGIPT+ITW + G+ +AVEG
Sbjct: 61  PLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEG 120

Query: 121 SWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLN 180
           SWDNW +R  LQ+SGKDF+I+ VLPSGVY Y+FIVDGQ RH P+LP   D+ GN FN+L+
Sbjct: 121 SWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILD 180

Query: 181 VSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEAS 240
           + D VP+ +QS++ FE P SPE++YS      ED++KEP  VP  L +T+L +  A+   
Sbjct: 181 LQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDI 240

Query: 241 SS---KPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
            S   +PQHV+LNHL+M+KG +  SVVALG THRF +KYVTVVLYK L R
Sbjct: 241 PSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28
Identity = 77/215 (35.81%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 86  WKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPS 145
           W+ +   +V  P +Q  PT+I WS  G+ V + GS++NW+++  L KS  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 146 GVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDI-----LQSVTEFE----- 205
           G + YKF VDGQ  H P  P +  ++G + NL++V  S  ++     L S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 206 ---APPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKPQHVVLN 265
              +PP P       F SEE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 266 HLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 285
           HL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 241 HLYALS--TKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 77/215 (35.81%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 86  WKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPS 145
           W+ +   +V  P +Q  PT+I WS  G+ V + GS++NW+++  L KS  DF  ++ LP 
Sbjct: 61  WQQDLDDSV-KPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPE 120

Query: 146 GVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDI-----LQSVTEFE----- 205
           G + YKF VDGQ  H P  P +  ++G + NL++V  S  ++     L S+   E     
Sbjct: 121 GEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRD 180

Query: 206 ---APPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKPQHVVLN 265
              +PP P       F SEE F K P  +P  L   +L  +   + D A   +P HV+LN
Sbjct: 181 LSSSPPGPYGQEMYVFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 240

Query: 266 HLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 285
           HL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 241 HLYALS--IKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-28
Identity = 91/281 (32.38%), Postives = 135/281 (48.04%), Query Frame = 0


Query: 25  GQGSMSETSSANRMNNAVSSDSMGNTPPGSP-----GNFRSPILFAPQVPVAPLQGGNVP 84
           G  +    S       A  S+  G   PG       G+   P +F+  +P + L G    
Sbjct: 2   GNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPSVFS--LPDSKLPGDKEF 61

Query: 85  TLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSI 144
                +W+ +   +V  P +Q  PT+I WS  G+ V + GS++NW+++  L KS  DF  
Sbjct: 62  V----SWQQDLEDSV-KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVA 121

Query: 145 LMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDI-----LQSVTEF 204
           ++ LP G + YKF VDGQ  H P  P +  ++G + NL++V  S  ++     L S+   
Sbjct: 122 ILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESS 181

Query: 205 E--------APPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGME---NADEASSSKP 264
           E        +PP P      AF SEE F K P  +P  L   +L  +   + D A   +P
Sbjct: 182 ETSCRDLSSSPPGPYGQEMYAFRSEERF-KSPPILPPHLLQVILNKDTNISCDPALLPEP 241

Query: 265 QHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPL 285
            HV+LNHL+        SV+ L  THR+  KYVT +LYKP+
Sbjct: 242 NHVMLNHLYALS--IKDSVMVLSATHRYKKKYVTTLLYKPI 272

[Close]

BLAST of Sed0006265 vs. ExPASy TrEMBL
Match: A0A6J1F546 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440954 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 244/286 (85.31%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD DGQGS+ ++S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADADGQGSVIDSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGSSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLPYIADE+GNVFNLLNV
Sbjct: 121 WDNWASRKTLQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPYIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. ExPASy TrEMBL
Match: A0A6J1HWQ6 (SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467354 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.4e-130
Identity = 242/286 (84.62%), Postives = 258/286 (90.21%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA GREES S GGGGG  AD  GQG +  +S  +  +N VSSDSM NTPPGSPGN RS
Sbjct: 1   MGNANGREES-SPGGGGGAVADAGGQGPVIGSSLVSETSNVVSSDSMVNTPPGSPGNLRS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           PILFAPQVPVAPLQGGN PT YNEAW+NEF   VDNPPEQGIPTIITWSY G SVA+EGS
Sbjct: 61  PILFAPQVPVAPLQGGNGPTHYNEAWQNEFHETVDNPPEQGIPTIITWSYGGGSVAIEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRKILQ++GKDFSIL+VLPSGVYHYKFIVDGQ+R+IPDLP+IADE+GNVFNLLNV
Sbjct: 121 WDNWASRKILQRTGKDFSILIVLPSGVYHYKFIVDGQKRYIPDLPHIADEMGNVFNLLNV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
           SDS PDILQS+ EFEAPPSPE+TYSQ FPSEEDFAKEPAAVPSQLHLTVLGMENADEASS
Sbjct: 181 SDSAPDILQSLAEFEAPPSPETTYSQVFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR
Sbjct: 241 SKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 285

[Close]

BLAST of Sed0006265 vs. ExPASy TrEMBL
Match: A0A6J1JIV6 (SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485497 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.4e-129
Identity = 243/296 (82.09%), Postives = 256/296 (86.49%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGG----------ADGDGQGSMSETSSANRMNNAVSSDSMGNT 60
           MGNA G+EES  GGGGGGGG           DGDGQG    +S  +  +NA+SSDSMGNT
Sbjct: 1   MGNANGKEESSPGGGGGGGGGGGGGGAGARGDGDGQGPAIVSSVTSETSNAISSDSMGNT 60

Query: 61  PPGSPGNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSY 120
           PP SPG FRSPILFAPQVPVAPL GGN PT +NE WKNE   AVDNPP QGIPTIITWSY
Sbjct: 61  PPDSPGKFRSPILFAPQVPVAPL-GGNGPTHFNETWKNELHEAVDNPPVQGIPTIITWSY 120

Query: 121 DGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADE 180
            G SVAVEGSWDNW SRK LQ+SGKDFSILMVLPSGVYHYKF VDGQRR+IPDLP+IADE
Sbjct: 121 GGSSVAVEGSWDNWASRKTLQRSGKDFSILMVLPSGVYHYKFTVDGQRRYIPDLPFIADE 180

Query: 181 IGNVFNLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVL 240
           +GNVFNLLNVSDSVPDILQSV EFEAP SPE+TYSQAFP EEDFAKEPAAVPSQLHLTVL
Sbjct: 181 MGNVFNLLNVSDSVPDILQSVVEFEAPQSPETTYSQAFPGEEDFAKEPAAVPSQLHLTVL 240

Query: 241 GMENADEASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           GMENADEASSSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVL+KPLNR
Sbjct: 241 GMENADEASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLFKPLNR 295

[Close]

BLAST of Sed0006265 vs. ExPASy TrEMBL
Match: A0A6J1D322 (SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=3673 GN=LOC111016534 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.7e-128
Identity = 238/287 (82.93%), Postives = 257/287 (89.55%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGG-GGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFR 60
           MGNA GREE+ S GGGG    ADG G G +++       +N VSSDSMGNTPPGSPGNFR
Sbjct: 1   MGNANGREETSSAGGGGSIVDADGHG-GPVTDNPVPAETSNVVSSDSMGNTPPGSPGNFR 60

Query: 61  SPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEG 120
           SPILF+PQVPVAPL+GGN PT YNEAW+NEF G  DNPPEQGIPTIITWSY G +VAVEG
Sbjct: 61  SPILFSPQVPVAPLRGGNGPTTYNEAWQNEFHGVEDNPPEQGIPTIITWSYGGINVAVEG 120

Query: 121 SWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLN 180
           SWDNW SRK LQ+SGKDFSI+MVLPSGVYHYKFIVDGQ+R+IPDLP+IADE+GNVFNLLN
Sbjct: 121 SWDNWASRKTLQRSGKDFSIVMVLPSGVYHYKFIVDGQQRYIPDLPFIADEMGNVFNLLN 180

Query: 181 VSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEAS 240
           VSDSVPDILQSV EFE+PPSPE+TYSQAFP EEDFAK+PAAVPSQLHLTVLGMENADEAS
Sbjct: 181 VSDSVPDILQSVAEFESPPSPETTYSQAFPREEDFAKDPAAVPSQLHLTVLGMENADEAS 240

Query: 241 SSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           SSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVLYKPL R
Sbjct: 241 SSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLYKPLKR 286

[Close]

BLAST of Sed0006265 vs. ExPASy TrEMBL
Match: A0A6J1H851 (SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461411 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 240/291 (82.47%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGG-----ADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSP 60
           MGNA G+EES  GGG GGGG      D D QG    +S  +  +NA+SSDSMGNTPP SP
Sbjct: 1   MGNANGKEESSPGGGSGGGGGAGGRGDADRQGPAIVSSVTSETSNAISSDSMGNTPPDSP 60

Query: 61  GNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSV 120
           G FRSPILFAPQVPVAPL GGN PT +NEAW+NE   AVDNPP QGIPTIITWSY G SV
Sbjct: 61  GKFRSPILFAPQVPVAPL-GGNGPTHFNEAWQNELHEAVDNPPVQGIPTIITWSYGGSSV 120

Query: 121 AVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVF 180
           AVEGSWDNW SRK LQ+SGKDFSILMVLPSGVYHYKF VDGQRR+IPDLP+IADE+GNVF
Sbjct: 121 AVEGSWDNWASRKTLQRSGKDFSILMVLPSGVYHYKFTVDGQRRYIPDLPFIADEMGNVF 180

Query: 181 NLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENA 240
           NLLNVSDSVPDILQSV EFEAP SPE+TYSQAFP EEDFAKEPAAVPSQLHLTVLGMENA
Sbjct: 181 NLLNVSDSVPDILQSVVEFEAPQSPETTYSQAFPGEEDFAKEPAAVPSQLHLTVLGMENA 240

Query: 241 DEASSSKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           DEASSSKPQHVVLNHLF+EKGWASQSVVALGLTHRFHSKYVTVVL+KPLNR
Sbjct: 241 DEASSSKPQHVVLNHLFIEKGWASQSVVALGLTHRFHSKYVTVVLFKPLNR 290

[Close]

BLAST of Sed0006265 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 334.3 bits (856), Expect = 9.4e-92
Identity = 172/286 (60.14%), Postives = 211/286 (73.78%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA G++E  + G GG        + +  + S+ +R +   SSDSM ++PPGSP    S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSR-HRRPSSDSMSSSPPGSPARSPS 60

Query: 61  PILFAPQVPVAPLQGGNVPTLYNEAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGS 120
           P LFAPQVPVAPLQ  N P   N  W N+     DNPPEQGIPTIITW+  G  VAVEGS
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGS 120

Query: 121 WDNWTSRKILQKSGKDFSILMVLPSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNV 180
           WDNW SRK LQKSGKD SIL VLPSG+YHYK IVDG+ ++IPDLP++ADE+GNV N+L+V
Sbjct: 121 WDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDV 180

Query: 181 SDSVPDILQSVTEFEAPPSPESTYSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASS 240
            + VP+  +S+ EFEAPPSP+ +Y Q  P+ ED+AKEP AVP QLHLT+LG    + A +
Sbjct: 181 HNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIA 240

Query: 241 SKPQHVVLNHLFMEKGWASQSVVALGLTHRFHSKYVTVVLYKPLNR 287
           +KPQHVVLNH+F+E+GW  QS+VALGLTHRF SKY+TVVLYKPL R
Sbjct: 241 TKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Sed0006265 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-86
Identity = 172/323 (53.25%), Postives = 211/323 (65.33%), Query Frame = 0


Query: 1   MGNAIGREESYSGGGGGGGGADGDGQGSMSETSSANRMNNAVSSDSMGNTPPGSPGNFRS 60
           MGNA G++E  + G GG        + +  + S+ +R +   SSDSM ++PPGSP    S
Sbjct: 1   MGNANGKDEDAAAGSGGADVTSSSARSNGGDPSARSR-HRRPSSDSMSSSPPGSPARSPS 60

Query: 61  PILFAPQ-------------------------------------VPVAPLQGGNVPTLYN 120
           P LFAPQ                                     VPVAPLQ  N P   N
Sbjct: 61  PFLFAPQPTLLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAPLQRANAPPPNN 120

Query: 121 EAWKNEFLGAVDNPPEQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVL 180
             W N+     DNPPEQGIPTIITW+  G  VAVEGSWDNW SRK LQKSGKD SIL VL
Sbjct: 121 IQW-NQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVL 180

Query: 181 PSGVYHYKFIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDILQSVTEFEAPPSPEST 240
           PSG+YHYK IVDG+ ++IPDLP++ADE+GNV N+L+V + VP+  +S+ EFEAPPSP+ +
Sbjct: 181 PSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHS 240

Query: 241 YSQAFPSEEDFAKEPAAVPSQLHLTVLGMENADEASSSKPQHVVLNHLFMEKGWASQSVV 287
           Y Q  P+ ED+AKEP AVP QLHLT+LG    + A ++KPQHVVLNH+F+E+GW  QS+V
Sbjct: 241 YGQTLPAAEDYAKEPLAVPPQLHLTLLG-TTEETAIATKPQHVVLNHVFIEQGWTPQSIV 300

[Close]

BLAST of Sed0006265 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70
Identity = 133/258 (51.55%), Postives = 177/258 (68.60%), Query Frame = 0


Query: 33  SSANRMNNAVSSDSMGNTPPGSPGNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLG 92
           S+A+  N+    + MG +PP SP   +SP++FAPQVPV PLQ  +   + N +W      
Sbjct: 2   SAASDGNHVAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 61

Query: 93  AVDNPP-EQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYK 152
             +    EQGIPT+ITW + G+ +AVEGSWDNW +R  LQ+SGKDF+I+ VLPSGVY Y+
Sbjct: 62  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYR 121

Query: 153 FIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSE 212
           FIVDGQ RH P+LP   D+ GN FN+L++ D VP+ +QS++ FE P SPE++YS      
Sbjct: 122 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 181

Query: 213 EDFAKEPAAVPSQLHLTVLGMENADEASSS---KPQHVVLNHLFMEKGWASQSVVALGLT 272
           ED++KEP  VP  L +T+L +  A+    S   +PQHV+LNHL+M+KG +  SVVALG T
Sbjct: 182 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 241

Query: 273 HRFHSKYVTVVLYKPLNR 287
           HRF +KYVTVVLYK L R
Sbjct: 242 HRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of Sed0006265 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70
Identity = 133/258 (51.55%), Postives = 177/258 (68.60%), Query Frame = 0


Query: 33  SSANRMNNAVSSDSMGNTPPGSPGNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLG 92
           S+A+  N+    + MG +PP SP   +SP++FAPQVPV PLQ  +   + N +W      
Sbjct: 4   SAASDGNHVAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 63

Query: 93  AVDNPP-EQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYK 152
             +    EQGIPT+ITW + G+ +AVEGSWDNW +R  LQ+SGKDF+I+ VLPSGVY Y+
Sbjct: 64  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYR 123

Query: 153 FIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSE 212
           FIVDGQ RH P+LP   D+ GN FN+L++ D VP+ +QS++ FE P SPE++YS      
Sbjct: 124 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 183

Query: 213 EDFAKEPAAVPSQLHLTVLGMENADEASSS---KPQHVVLNHLFMEKGWASQSVVALGLT 272
           ED++KEP  VP  L +T+L +  A+    S   +PQHV+LNHL+M+KG +  SVVALG T
Sbjct: 184 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 243

Query: 273 HRFHSKYVTVVLYKPLNR 287
           HRF +KYVTVVLYK L R
Sbjct: 244 HRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of Sed0006265 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 258.8 bits (660), Expect = 5.0e-69
Identity = 132/258 (51.16%), Postives = 177/258 (68.60%), Query Frame = 0


Query: 33  SSANRMNNAVSSDSMGNTPPGSPGNFRSPILFAPQVPVAPLQGGNVPTLYNEAWKNEFLG 92
           S+A+  N+    + MG +PP SP   +SP++FAPQVPV PLQ  +   + N +W      
Sbjct: 2   SAASDGNHVAPPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSS 61

Query: 93  AVDNPP-EQGIPTIITWSYDGRSVAVEGSWDNWTSRKILQKSGKDFSILMVLPSGVYHYK 152
             +    EQGIPT+ITW + G+ +AVEGSWDNW + + LQ+SGKDF+I+ VLPSGVY Y+
Sbjct: 62  LYEEASNEQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVYEYR 121

Query: 153 FIVDGQRRHIPDLPYIADEIGNVFNLLNVSDSVPDILQSVTEFEAPPSPESTYSQAFPSE 212
           FIVDGQ RH P+LP   D+ GN FN+L++ D VP+ +QS++ FE P SPE++YS      
Sbjct: 122 FIVDGQWRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGA 181

Query: 213 EDFAKEPAAVPSQLHLTVLGMENADEASSS---KPQHVVLNHLFMEKGWASQSVVALGLT 272
           ED++KEP  VP  L +T+L +  A+    S   +PQHV+LNHL+M+KG +  SVVALG T
Sbjct: 182 EDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGST 241

Query: 273 HRFHSKYVTVVLYKPLNR 287
           HRF +KYVTVVLYK L R
Sbjct: 242 HRFLAKYVTVVLYKSLQR 258

The following BLAST results are available for this feature:

BLAST of Sed0006265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933563.1	3.0e-132	85.31	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita mosc...	[more]
KAG6588137.1	1.1e-131	84.97	SNF1-related protein kinase regulatory subunit beta-1, partial [Cucurbita argyro...	[more]
XP_023531782.1	1.5e-131	84.97	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita pepo...	[more]
XP_038880301.1	2.1e-130	83.10	SNF1-related protein kinase regulatory subunit beta-1 [Benincasa hispida]	[more]
XP_022967978.1	2.8e-130	84.62	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 [Cucurbita maxi...	[more]

BLAST of Sed0006265 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VQ1	1.3e-90	60.14	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
Q9SCY5	1.2e-67	48.97	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q9QZH4	1.1e-28	35.81	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q6PAM0	1.4e-28	35.81	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
O43741	5.4e-28	32.38	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]

BLAST of Sed0006265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F546	1.4e-132	85.31	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1HWQ6	1.4e-130	84.62	SNF1-related protein kinase regulatory subunit beta-1 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1JIV6	7.4e-129	82.09	SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita maxima O...	[more]
A0A6J1D322	3.7e-128	82.93	SNF1-related protein kinase regulatory subunit beta-1 OS=Momordica charantia OX=...	[more]
A0A6J1H851	4.1e-127	82.47	SNF1-related protein kinase regulatory subunit beta-1-like OS=Cucurbita moschata...	[more]

BLAST of Sed0006265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21170.1	9.4e-92	60.14	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	3.4e-86	53.25	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.1	1.6e-70	51.55	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.6e-70	51.55	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	5.0e-69	51.16	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 197..284 e-value: 8.1E-23 score: 91.8
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 215..283 e-value: 2.7E-18 score: 66.0
None	No IPR available	GENE3D	6.20.250.60		coord: 190..284 e-value: 1.5E-21 score: 78.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 103..180 e-value: 2.23892E-25 score: 94.2028
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 102..183 e-value: 1.5E-29 score: 102.0
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 94..186 e-value: 9.1E-22 score: 78.7
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..286
IPR037170	SNF1-related protein kinase regulatory subunit beta-1	PANTHER	PTHR46316:SF9	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..286
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 100..181
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 184..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006265.1	Sed0006265.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031588	nucleotide-activated protein kinase complex
molecular_function	GO:1901982	maltose binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0019887	protein kinase regulator activity