Sed0006262 (gene) Chayote v1

Overview


Name	Sed0006262
Type	gene
Organism	Sechium edule (Chayote v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	LG05: 29530634 .. 29534469 (+)
RNA-Seq Expression	Sed0006262
Synteny	Sed0006262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTTCGGATATAACAAAAACCAACCGAACCAACATCTCTCGTATTTTCAAAAACAAATTAAGTAAACGGGAACGCGTTTCTGATAAACGGGAATCGGAAAAAAAAATCCCAATTTGCTTGGAGCTCTCATCTTCCATCTCGATTCAAGATACCAAAATTGATTCTCCCAATTCGTCTGTTTTCGGATTAGGTTTTCATTCGGTCTCTAATGGCGTCTAATTCGTATCGAGGCGGCGGTTCCTTATACAGCGCCAATGCCGCTCCTTATCGTTCCAGGTATTGTTCTTGTTCTTCTATCATGCTAAATTCTCAATTTATTTCCAGGAATTAGGAGATTTTCAAAAATTATGTGTTTGTATCGTTTGTTTCTTGGAATCGCTCAAATCAACTTCTGTATTTATTGGCGTTACGAATGATGATTACGCAATTCATGTTGCTCAAGTGCAATCGTTATTTGTTTTGAGGTGTTCAGGGAGGGGCTTAGCACGAGACAGGCGGCTTCTTCTGATGAAATTCAACTCCAGATCGATCCGATGCAAGGGGACTTGGATGACAGGATCGGTGGTCTCCATAGCCAAGTTACAAGGCTAAAAAATGTGAGTATTGTGGTTTTACGTTAATCTATGGTATAGCTTTGCTCTTAAATCATCGATCGGTCGAGCATATTTGACCTCTCCCTTGAGGTCGAGCATATTTGACCCTTTACTTTAAGGTCGAGCATATTTGACCCTCTACTTTACGAGCATATTTGACCTAGATGCAAAGTAACTCGACCATAGGGTTTAAATATCAAGAAGCTTAAGCAGATGAGTTGGGTAACCCAACGCTCCCTTCACTTGTAGGCTTAGAAAATTGAAAATGTTCAATGTTCGTGTTATGAAAACGGCAATCAACAATCGATAAACGAAGATATGAAACAGATAACGATAAATCTGAAAGACGAAGAAGAAACAACACATAGTATTTACGTGGTTCACCGTTGTTGTGTTGGCTAGTCCACGGGCAGAGAGGAAGCGACGTTTTATTAAGGAGAACGAAATTACAAAGTTTACATAATGAATGTCATAATACGGCTAGAATTTAATTTGAGTTTATATAGGCACTCTCATTAAACCCTATTACAGAATGCGTAAGCATTAAACAGAAAATGGATGTAAACGCGTGCTGCAGAAACAGAATGTTGATGCCCAAATACATGTGGAACGCATTGCAGCAATGCGCTACAATGCGAGATGCGTTTGCGTGCGGGATGTGCTAAGCGAATGATGCATTCACGCAAGAGAATGCGGAATGCCTTTTTCGCAACGGGGGCATTGCCCCCGCACCTCCACTCGCTGACCGGACAACAAGACCCCCGCTTACTAATCACAGGGCATCAATGCGTTCAAGGCATAATACAACAATTAGGATCCCACTACTGACCCACATTGAAAAAGTGGAGAGTTCTCTAAGCATTTATTAGATAGGTGAACTATTCCTCTCATCACTAATTGGTTTCGAGATGGATGGTCATACTATCTAATATGGTGTAAAGCCCATTAATTCCAAGCGGGTATTCAGTTCAATAAAATGAAATTGAGATCCGATTCAAGATTGGTGAAACCCAAAAGAGGCGCCATCTTGAGAGGGCATGATAGAATCCCTCTATTGTTCCACATTGGAAAGGTGGAGAGTCCTCATACATTTATGAGATTGATGGACTACTCCCCTTATCACCAATTGGTTTTGAGATGAATGCCGACACTATCTAATACTCAACCATTAGAAATCAATAAATGAACCGACTTGAGAGGAGTTTGACATTCTCTCTAATACCATGTCGAATCTTGTTAAATTAACAATCAATCAATATTGAATTACAAAGTGGAACACACAGCTAAACTTTTATTGTGAATATGAACAACTATAAACAAAATTTTTGACGATCTTCAAATTTCATTAGTGCTTTTGTAATATTTCAATGCATGTTAGAGCTAATCTATTCTGTAGTGGTACTATTGGACATGGTATAGCTGTATCAGTATGCTGCGTGTTCATCTTTGATTTTAATATAGTGTCACTCACAGGCAGGGTTTTCTTTCTTTAAAGTTTTGTATTTTCCTTCCCTTCTTTTTATATGATACAACTGGTACGAGCAGAATCCATATATTTACGAGTCTTTGTTATTGCAATTCTAGTCTATTGGCTCATGTTTGTTCTAAACGTATCATAGGAAATGAAAGAAATGTGTGATAATAATATAACAATTATATCGATTTAAATTATGCTCCCTTAGAGGTATTAGATTCGAAACTCACCGGTGAACTTAATTCTAAAATCCCTTGTTGTTTTCTTAATATGAGCTTTGGGACAGACGTGGTACCCCGAGTATCTAGAGGAGCAAAACTCCGATTTTTTTGTTATCAAAAAAATAATATAACAAGCATGTCAATGTAAAATTATACTCGGTGGAGGAATCCTTTAGACTATGGGTTCCAAAAAAGCTTAGCTCTAAAAATCTTGGAAACAGAAATTTAATCTTGGTACTGGGGTATGGAAAAAAATGTTTGCCAGGCGATGTTGAGCAGCTTCTTTTCTTTCACATCATCTACTAAAGCTCTTTCACTTATTGAGGGAAAAATGAATAGATTCTGTATTTTTCTGGTCCCAAAGTTTACTGTCCGGTTATCGGCTACTTAAACAAGAGACGTTAATCTTAGAAAGCAACCTTATACTGACATCAGATTGGCATTTTTTCTGTTCTTAGTGCAAAACTCGTAGGATCTTCATTTGGCATAGGGAGCCTGCCCCACTTTGACCAACTATACGTTCCATCTCTCAAAACCAATGAAACTAATGAATAGTGAGAGGAGTACGATTTCTTATGATTCTTCACAGTTTTTGTTTTATTTGTAATTTTTATTTTATTGAGATTATGTACAGATTATACCTGCCAGTTCGTTTCCCTAACTCTAGATTCATTTTTTTATTTGTTTTTTTGGTACTTACTTTAATTGTTCTGGTGCAGATTGCTCAAGACATTGGAACAGAAGCAAAATCTCAGCATGATTTTCTAGATCAGTTGGTATGCAACTTTTTTTTTCTTTCTGAATACGATCCATAGTTGTCATGTTTCCACTTATCTTTAGGTCTAATTAGTTGAAGAAAAATGGTTCAAAATGTCTGTAATTCAGCTGGAAGAGGCAACCTCATTAGTAAGAGTTTTGGGTCACTTATCATAATGATTTATAGGTCTCAGGTTCGAGCTATTGAGTGAGCTTAAAAATAAAAAGTTTTTGATATCTTTTAGATTTGGGTCTTGGAGCGGGCGTAGGTATCCTCGAGTATAGAGGAGCGAAGCTCTGACATTCCAGTTCTAAACAATGTGTGCAATCCTATCCTATGTACCTCTTTATTACTTATTGACTGATTAAAGCTCTGTTCTTTGTCGTGTTGCAGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGAACAACATAAGAAGATTGAACACGAAAATCATACAAAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCGTTGATCTGTTTCTTTGTAGTGTATATGTGGTCAAAAGTATCCATGAAATGAATGTTGTATCATTATGAATGGAAGCTGGAAAAGAAGCAGAAATGATGTTTAACATTATCATGTTCACGTTATCAAAAAAGTATAGACAGGTTAACAGTGTCACTCATTGGGTAGAAAATGGTACAGCGAAAATAGGGTATTGGTTAAATTTGTAGGAACTTTTGAGTATACTTTTATACGTTGTAAAGATTTGTATTGTTCATCATAATTATAGTATTCTTTTTCTAATGCCAC

mRNA sequence

GTGGTTCGGATATAACAAAAACCAACCGAACCAACATCTCTCGTATTTTCAAAAACAAATTAAGTAAACGGGAACGCGTTTCTGATAAACGGGAATCGGAAAAAAAAATCCCAATTTGCTTGGAGCTCTCATCTTCCATCTCGATTCAAGATACCAAAATTGATTCTCCCAATTCGTCTGTTTTCGGATTAGGTTTTCATTCGGTCTCTAATGGCGTCTAATTCGTATCGAGGCGGCGGTTCCTTATACAGCGCCAATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACAGGCGGCTTCTTCTGATGAAATTCAACTCCAGATCGATCCGATGCAAGGGGACTTGGATGACAGGATCGGTGGTCTCCATAGCCAAGTTACAAGGCTAAAAAATATTGCTCAAGACATTGGAACAGAAGCAAAATCTCAGCATGATTTTCTAGATCAGTTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGAACAACATAAGAAGATTGAACACGAAAATCATACAAAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCGTTGATCTGTTTCTTTGTAGTGTATATGTGGTCAAAAGTATCCATGAAATGAATGTTGTATCATTATGAATGGAAGCTGGAAAAGAAGCAGAAATGATGTTTAACATTATCATGTTCACGTTATCAAAAAAGTATAGACAGGTTAACAGTGTCACTCATTGGGTAGAAAATGGTACAGCGAAAATAGGGTATTGGTTAAATTTGTAGGAACTTTTGAGTATACTTTTATACGTTGTAAAGATTTGTATTGTTCATCATAATTATAGTATTCTTTTTCTAATGCCAC

Coding sequence (CDS)

ATGGCGTCTAATTCGTATCGAGGCGGCGGTTCCTTATACAGCGCCAATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACAGGCGGCTTCTTCTGATGAAATTCAACTCCAGATCGATCCGATGCAAGGGGACTTGGATGACAGGATCGGTGGTCTCCATAGCCAAGTTACAAGGCTAAAAAATATTGCTCAAGACATTGGAACAGAAGCAAAATCTCAGCATGATTTTCTAGATCAGTTGCAAATGACATTGATCAAAGCTCAAGCAGGGGTGAAGAACAACATAAGAAGATTGAACACGAAAATCATACAAAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCGTTGATCTGTTTCTTTGTAGTGTATATGTGGTCAAAAGTATCCATGAAATGA

Protein sequence

MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVTRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFALICFFVVYMWSKVSMK

Homology

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BLAST of Sed0006262 vs. NCBI nr
Match: XP_022940948.1 (bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-56
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MASNSYRGG S Y+ +AAPYRSREGLSTR AA+SDEIQLQIDPMQGDLDD+I GLH QV 
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQ+IGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMWSK+S K
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of Sed0006262 vs. NCBI nr
Match: XP_022980898.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 3.7e-56
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MASNSYRGG S Y+ +AAPYRSREGLSTR +A+SDEIQLQIDPMQGDLDD+I GLH QV 
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQ+IGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMWSK+S K
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of Sed0006262 vs. NCBI nr
Match: XP_038896659.1 (bet1-like protein At1g29060 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y++NAA YRSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNSNAAAYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQDIGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMWSK+S +
Sbjct: 121 LICFFIVYMWSKISRR 136

[Close]

BLAST of Sed0006262 vs. NCBI nr
Match: XP_022976307.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023535245.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 3.1e-55
Identity = 114/136 (83.82%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y+ NAAPYRSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIA DIGTEAK QHDFLDQLQMTLIKAQAGVK+N+RRLN KIIQNGSNHVVQVV+FA
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMW K+S K
Sbjct: 121 LICFFIVYMWMKISRK 136

[Close]

BLAST of Sed0006262 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 4.1e-55
Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y+ +AAP+RSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQDIGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMW+K+S K
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of Sed0006262 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-44
Identity = 95/135 (70.37%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MASNSYR--GGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQ 60
           MASN +R   GGSLY   AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD I GLH Q
Sbjct: 1   MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VTRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVV 120
           V +LKNIAQ+IG+EAK Q DFLD+LQMTLI+AQAGVKNNIR+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFVVYMWSKV 134
           FAL+ FFV+Y+WSK+
Sbjct: 121 FALLVFFVLYIWSKM 134

[Close]

BLAST of Sed0006262 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-43
Identity = 95/134 (70.90%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 1   MASNSYRG-GGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQV 60
           MASN  RG GGSLY   A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD I GLH QV
Sbjct: 1   MASN--RGAGGSLY-GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQV 60

Query: 61  TRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVF 120
            +LKNIAQ+IG+EAKSQ DFLD+LQMTLI+AQAGVKNNIR+LN  II++G+NH++ VV+F
Sbjct: 61  RQLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLF 120

Query: 121 ALICFFVVYMWSKV 134
           AL+ FF++YMWSK+
Sbjct: 121 ALLLFFILYMWSKM 131

[Close]

BLAST of Sed0006262 vs. ExPASy Swiss-Prot
Match: Q9UNK0 (Syntaxin-8 OS=Homo sapiens OX=9606 GN=STX8 PE=1 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 9.9e-04
Identity = 26/96 (27.08%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 35  DEIQLQIDPMQGDLDDRIGGLHSQVTRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGV 94
           DEI+ Q   +  + D  +  L S ++R K + Q+IG E   Q++ +D L   +      +
Sbjct: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 197

Query: 95  KNNIRRLNTKIIQNGSNHVVQVVVFALICFFVVYMW 131
           +N  RR+N    ++ S  ++ V++  L+   VV +W
Sbjct: 198 RNETRRVNMVDRKSASCGMIMVILLLLVAIVVVAVW 233

[Close]

BLAST of Sed0006262 vs. ExPASy TrEMBL
Match: A0A6J1FQQ6 (bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 8.0e-57
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MASNSYRGG S Y+ +AAPYRSREGLSTR AA+SDEIQLQIDPMQGDLDD+I GLH QV 
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQ+IGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMWSK+S K
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of Sed0006262 vs. ExPASy TrEMBL
Match: A0A6J1J0M1 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56
Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MASNSYRGG S Y+ +AAPYRSREGLSTR +A+SDEIQLQIDPMQGDLDD+I GLH QV 
Sbjct: 1   MASNSYRGGSSFYNGDAAPYRSREGLSTRPSAASDEIQLQIDPMQGDLDDQIVGLHGQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQ+IGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHVVQVVVFA
Sbjct: 61  RLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVVQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMWSK+S K
Sbjct: 121 LICFFIVYMWSKISRK 136

[Close]

BLAST of Sed0006262 vs. ExPASy TrEMBL
Match: A0A6J1IFD8 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 114/136 (83.82%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y+ NAAPYRSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNGNAAPYRSREGLSTRTAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIA DIGTEAK QHDFLDQLQMTLIKAQAGVK+N+RRLN KIIQNGSNHVVQVV+FA
Sbjct: 61  RLRNIAHDIGTEAKFQHDFLDQLQMTLIKAQAGVKDNVRRLNKKIIQNGSNHVVQVVIFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMW K+S K
Sbjct: 121 LICFFIVYMWMKISRK 136

[Close]

BLAST of Sed0006262 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y+ +AAP+RSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQDIGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMW+K+S K
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of Sed0006262 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MASNSYRGGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQVT 60
           MAS+S+RGG S Y+ +AAP+RSREGLSTR AA+SDEIQLQIDPMQGDLDD I GLHSQV 
Sbjct: 1   MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVK 60

Query: 61  RLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVFA 120
           RL+NIAQDIGTEAKSQ DFLDQLQMTLIKAQAGVKNN+RRLN KIIQNGSNHV+QVVVFA
Sbjct: 61  RLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGSNHVIQVVVFA 120

Query: 121 LICFFVVYMWSKVSMK 137
           LICFF+VYMW+K+S K
Sbjct: 121 LICFFIVYMWAKMSRK 136

[Close]

BLAST of Sed0006262 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-45
Identity = 95/135 (70.37%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MASNSYR--GGGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQ 60
           MASN +R   GGSLY   AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD I GLH Q
Sbjct: 1   MASNPHRSGAGGSLY-GGAAPYRSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQ 60

Query: 61  VTRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVV 120
           V +LKNIAQ+IG+EAK Q DFLD+LQMTLI+AQAGVKNNIR+LN  II++G+NH++ VV+
Sbjct: 61  VRQLKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSIIRSGNNHIMHVVL 120

Query: 121 FALICFFVVYMWSKV 134
           FAL+ FFV+Y+WSK+
Sbjct: 121 FALLVFFVLYIWSKM 134

[Close]

BLAST of Sed0006262 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-44
Identity = 95/134 (70.90%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 1   MASNSYRG-GGSLYSANAAPYRSREGLSTRQAASSDEIQLQIDPMQGDLDDRIGGLHSQV 60
           MASN  RG GGSLY   A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD I GLH QV
Sbjct: 1   MASN--RGAGGSLY-GGADPYRSREGLSTRNASGSEEIQLRIDPMHSDLDDEILGLHGQV 60

Query: 61  TRLKNIAQDIGTEAKSQHDFLDQLQMTLIKAQAGVKNNIRRLNTKIIQNGSNHVVQVVVF 120
            +LKNIAQ+IG+EAKSQ DFLD+LQMTLI+AQAGVKNNIR+LN  II++G+NH++ VV+F
Sbjct: 61  RQLKNIAQEIGSEAKSQRDFLDELQMTLIRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLF 120

Query: 121 ALICFFVVYMWSKV 134
           AL+ FF++YMWSK+
Sbjct: 121 ALLLFFILYMWSKM 131

The following BLAST results are available for this feature:

BLAST of Sed0006262 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940948.1	1.7e-56	86.03	bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein...	[more]
XP_022980898.1	3.7e-56	85.29	bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein...	[more]
XP_038896659.1	1.1e-55	85.29	bet1-like protein At1g29060 [Benincasa hispida]	[more]
XP_022976307.1	3.1e-55	83.82	bet1-like protein At1g29060 [Cucurbita maxima] >XP_023535245.1 bet1-like protein...	[more]
XP_008466185.1	4.1e-55	83.82	PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like pr...	[more]

BLAST of Sed0006262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXX9	1.5e-44	70.37	Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV...	[more]
Q8L9S0	1.7e-43	70.90	Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV...	[more]
Q9UNK0	9.9e-04	27.08	Syntaxin-8 OS=Homo sapiens OX=9606 GN=STX8 PE=1 SV=2	[more]

BLAST of Sed0006262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQQ6	8.0e-57	86.03	bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 S...	[more]
A0A6J1J0M1	1.8e-56	85.29	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=...	[more]
A0A6J1IFD8	1.5e-55	83.82	bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111476742 PE=4 SV=...	[more]
A0A5A7TAQ3	2.0e-55	83.82	Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CQM7	2.0e-55	83.82	bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1	[more]

BLAST of Sed0006262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14600.1	1.1e-45	70.37	Target SNARE coiled-coil domain protein	[more]
AT1G29060.1	1.2e-44	70.90	Target SNARE coiled-coil domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 37..104 e-value: 1.6E-4 score: 31.0
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 42..104 score: 11.557249
None	No IPR available	GENE3D	1.20.5.110		coord: 44..104 e-value: 2.2E-9 score: 39.1
None	No IPR available	PANTHER	PTHR12791:SF55	BNAC03G58880D PROTEIN	coord: 10..133
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 35..102
IPR039897	BET1-like protein	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 10..133
IPR039899	BET1, SNARE domain	CDD	cd15853	SNARE_Bet1	coord: 49..103 e-value: 9.07894E-13 score: 57.1274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006262.1	Sed0006262.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0030173	integral component of Golgi membrane