Sed0006260 (gene) Chayote v1

Overview


Name	Sed0006260
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog 8A
Location	LG07: 40597429 .. 40603853 (+)
RNA-Seq Expression	Sed0006260
Synteny	Sed0006260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAATTAAAGAAAATAAACAAATAAAATATTTTAAAAAAAAATGAACGAAGCAAGTATCAAGTGTAGCCAAGCGTAGGATAAGAAACAGTGGCCCATTTGTATACAAACGTTTTGGCGCAGTCGATCGGTCCCAATCGGCCAATCTCCGCGCAAAATCATTGAGAATCGGTTTTCATTTCTCTCTTTTTCTCTCCGTTCGATGTCGCCGACGACTTGCTAAGCTTCATTAAGGTTGTAATCTCGATCTCTGTGTTTGATCTTTTGATTTGAGTTATCGTTTGTTTGATTTCATATTGGAAGTCGTTTCTTTTGTAGGGAATCCAATTTCGTTGAAAGATTCTGGAAATCGATGGCTGCACCACCGGCTAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTATGTTCTTAACCCAACCCTTGTTTTTTTTTTTTTTTTGAATTGATGGAAATGAAATGGGAGGTGCTGTTGGAGATCTGATGATTGGATTTGGTGTAGTGTGGTGTGGGATTTGTTGACGCTAATTTGATTTTGGGTTGTCTTGTTTTTTTGTGGGAGTAAATGGATTGCATGTCCTCGATTTGTGTTTGGCACTTTTGATTTGATGATGTTCGATTTGTGTTGATCTTTTTCTTTATTTTGAACCCTTTTTGGGTTCGAGTTTGCATTCTCGAGTCTCGATGTGTTTTGTTCTAATTCTACATTTCATCTTCTGGTTCAATGCGCCGTTGTTCTGTGTTAAAAGGGGCTGTGATCTTTTCTGTTCTCTCCGTTTGTTTTTCAATGTAAGGTTTCTCAACGGTAGCCTCATTGGTTGAAGCTTGGGGCCTCTTAAGTATTGTTAGGATCTCACAAATGTCCCATATTGGAAAGTGGGAGAGTCCAACATCAATATAAAAAGCGATAGGGGTTACTCCCCCATTGCCAATTAATTTTGAGGTGGAACCCCATTTTCTCTAATAAGTATTGAGACCCACGAGTGAGTTTAATTGTAAAATCTCTTGATATCTACTATACCAGGTGTGGACCTTGGGACAGGTTCTTGTGACTCTAGGTTTCCCGGTCATAGAAAAAAACATAAAAATTAGAAGGTTGTTGTTGGGATTTCTCTTCGTGAGCATTAGTTTAATTATTGAGTTTTATGTCCCCAAGGGGTGGCACAGTGGTTCAAGACTTGGATTTTGAGGGTATGCTCCTTTCAAGATTCCAGGTTCGAGACTTAGCTGTGACATTATTTCTTTGATGTCTCCCGGTGTCTAGCCTAAAGACGGACGTGGTTACCCTTGTTTCAAAAAAAAAAAAAACATTATTGAGTTTTATGCTTAAATATCGGTAGGTGAAATTTCAAGTTAATTGACTATTTGACTGATAGTTTTTGTTTGTGGTTACGCATATGCTTTGTATGATGGGTTGTAGGAGTATGTAACGTTTGATCTTTCTGTTTCTTGCTGATTTAAGTGCTTTAATTGTTAGTGGCCTCTAGCATAATTTTCAGGTTTATCTTTCCTTAAGAATAGTAAATTTAATTTTGTGAGTCCCATGTCTTTGTTCATAAAAAATTATGTGGAACCCATGGAAATTATGTGATATATTTGTAAACCATCCATGTAGCGTTCCAATGGCCTTAACGTAAGCTTTTTTCATTGATTGGTTTGCAGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGGTTTGTAGCCTGCATACCTTTGAAGCTTGCATGTCGAAACGTTTTAGAGTCGTATCAATTCATAAACATTCGAAAGGTTTAGTAATGGTCATAAACAAGTTAACCATCACGGAGTTGTCTAGTGGTCAAGAGTGTCATAAGTAACTAAGAGTTGATGAGTTCAATCTATGGTAGCCACCTGCTTAGAAAATAATTTTCTACAAATTTTCATGGTATCCAAATGTAGGGTTAGATAGTATGTCTTGCAATAATACTTAATAGTTAAGGTGCACATAATCTGGCCCAGACATTCACGGATTATAAAAAAAAATGGTCATAGAAAAATTGGGAAAATTAACGGAAATGAGGTACAAGAGTGATTTGGAATGATTATCAGTATATTAGCTGGTTTGACATTTTCATGCACTACTAATCACATGTATGATATTGATGATAGATCTGCACAAGAAACTCTACATGTTTTCTAAGTACACGTGGTTTGGAAGCATCTCTTTGATATCAGATAATATGCTTCTCATGGCAGTATTGATTTTAAGATAAGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACTGCTGGTCAAGAGCGTTTCCGGACTATCACAACAGGTATGTATCGGATATTTGATCATATTTCTTCTAGATGTTGTACTAAGATAGATGCTCACTCTATGTATGATTTATTGAAATTCAGTATTATTTGAACGTAGAGAGGAAAATGACGATGACCTTAAATGTAATTGGGGTGTCCCTCCAAAATTTCGTGTAACTATTCAATCTTTTCTATTTTAGCCCATTCAATAATGTCTTGGAATCAAGTAAGGTTAAAGGTAGAAATTTAAAAAAACATTCATTTAGGTATATTAGATCATTTTAATGGTTATTTCGACATCGAACATTTCAATTCTTTCAATTTAGTAGTTCCCGAGGGATGGCGCAGAGGTTGAAAACTTGGGTTTTGAGGTTATGCTCCCCTCAAGATCCCGAGTTCGAGTCTTCCCTGTGACAGTACTCTTTCGATGTCTCCGGTGCCTGGCCTAGGGACGGGTGTGGTTACCTTGTTTCAAAAAAAATTCTTTCAATTTAGTATGAAGGTCCAATCTGAGAATAAGTGCTTCTAATTTTTGTCACGACGTATGGAGATAGAAGTGGCAGTGAAGTAACTTTCTTCTCCAACTCCCTAATACCATATTTAACCATCATGGAGTGGTCAAAGAGGGCATTGGGGTGCATAAGGTGATGAGTTCACTTCATGGTGGCCACCTACCTAGGAATTAATTTACTACGAGTTTCCTTGACATTCAATTGTAGGGTCAGACGGTATACCTTGCGATATTAGTCGAGGAGCACGCAAGCTGTCCCGAACAGTCACGGATATAAAAAAATACCAATTTTTATTCCAATGTTTGTGAAGTGAAGGATTTATTGGTATTATCAAAGAAGCGAAGACTTTACTGTATCTCTAATTTTGATGATTATAGTTTGATTTTTGGGTGTGATTTTGTTTCACCTTGTAGCTTACTATCGAGGAGCCATGGGAATTCTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAATAGTGAGTTATTTTATTGCCTATTTATGATGAATTTATTTGAAATTGTTCCGCTCATCTTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAATATCAAATGTTTGGCCATGAGGGGTTCATGGTTCATTTTATCTACGGTTTCATTCAAGATTTTTCTAACTTGTGAAATTAGTTTATATTAACATTAATTTTCATCTAGTTGGGTAAGTTATACTCTTAAGAGCTAAAAGCTTTTGTTAGGGTAAAGTGGGTTGATCTTTTTGTTCCTGATGTCAAATTAACCTATAGTTTAAGAAAAATGACTTTGAACTAAAATGACCAATCATCAACTGAATCAGAGTTGGACTGAACCAACCACAACCGACCATCTATCAGAACCGAAACAACCAACTGATCATGTAGGCTTAGCAGCACAAGTGATTGTGGAGGATTAAAATCATTTTCCTAAATAATTTGTAAATTTTAGCAACAAATAAATGTCACTTTTAAGAAATCTTATTGCTATAAAACACTTTTTAAAAATCAGTGTTTTCAAGGCTATCGCCTTTTCTCGCCTATGGCCATCGCCTTGCACATAGGCAGGTATTGCGCCTCTAACGTAGCTAAGGCGAGCTCCTTGCTCCTTCAATCAGGCCCTCGCCTTTCCTCACCATTTTGCGCCCTGTATCGCCTTCGCCTCAAGCCAAGGCGTGGGCCTTGTTAAAGTTTTATTTATTTATCAATATCCTAACTTAATATCCACAAAAAGAACCTAGAATTAGTTTATGAAGAAATCCAACAACTATGCGAAGTCTTTATTAAGGATACTTAATTTGTTTAATTGATATTTCAAATATGTTTGTTTATTCAAGTTATTTGACGTAGAATTTTTGTTTTTTTTATACTTTTAGTTAACTTCAAATTTTTTTATACAAATAATAATTTAATATTATGGTATACCTTATAATAACATAATTTTTTGTGATTTATTATTTTTTTATTTTTACTTTTTAGTATTTTTCCATATGAATTTGAAATTTTATGGGAATGCACATATGTTTTATTATCAATTTATAAATGCGCCTCTCTTTACTCGAGCCTCGCCTTTTTATGGCCTCTCGCTTTGAGGCGATTAGAGAGAGTATCATCTTGCATTTCGCCTTGCGCTTTGAAAACACTGTTAAAAACTACTTTTAAAGTTCTAAAAAGATAATACTAAAGTGATTGACTAGGTATCACTTTCAAATTGCTATATAGTAATTTGATATTTGTAAAATATTTTTTAAAGTAGTGACCAAACTAACTTGTGGTTGAACTCTTTATGAAGAGTGTAACCAAACAAATGGTTATTTGGGTTTCAATCATATCACTAACTTTGGTCTCTAATCACTTCCAAAATTTTCTTATATCTATTATGAAATTTACTCTTTTCTTATCCAGACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGTAAGCATATTGTATTGCTCAATTGCTCTCAACGTTTGTCTTTTTTCTTAATGTTTAGCACCAAAGAATTACAGGTTCAAGAATTTACATCTCCACTTTAAAGCTCATACTTAGTTCAAATGTAACAAAATAGGAGTTATTTTAGGCCCTTTGATAACCATTTGGTTTTTTATTTGTGGTTTATGAAATTTAAGCTTATTCTTACTCAAATTTCCTACGATGTGTTCCATCTTTCCTACAATGTATCAATCTTTCCTTAAGAAAGTATGTGAATGCTAACCAACTTTCAAAAACAAAAACAAGCTTTTGTTAGCTACTTTTTTTGTTTCTAAATTTTGGTTTGGTTTCTACAAATATAGGTAAGATGTAGATATCAAAGTAAGAAAAAACATGTGGTAAGATAGTTGTTGTAGGTTTAAATTTCAAAAACAAAAAACAAAAAACCAAATGGTTATCAAATGGGGCCGTAACATTTTAATTGAAGTGATGTTATTCTTTGTATACTATGTGTCTTTTTTATTTCGTCACAGGCTGTGCCTACTTCTAAAGGTCAAGCCCTTGCTGATGAGTATGGAATCAAATTCTTTGAAACCGTAAGTTAGAAATACTTCAAGAAGTTCTTGTTCCAAAAAAAAACTTCAAGATGAAGTTGGAATCTTTGCAGTATTTATTTATCTGTGCTCAGTTCTTGCATTTAACATACTCTGCAGAGTGCAAAGACAAACATGAATGTCGAGGAAGTTTTCTTTTCGATTGGAAGGGACATTAAGCAAAGGCTTGCAGACACCGATTCGAAGGCAGAGGTATTTATCCGTCGTTTTCAATCATAGATTGCTTTGAATTTTCTTTAGTACGGAGAAATTGTTGTCACCAAGTAAGTAAAATCTTAATGTGGATGAGATAATTTTGGAATCCAGCCTCAAACAATCAAAATAAACAATCCAGACGCAGCAGCAGGAGATGGTCAAGCCACTCAAAAGTCAGCTTGCTGTGGCTCGTAAAGTCGTAGCAGAAGATCGAACCAAGCGAAAAACGCCCTTTATATCGTGGTGGTACCTTCTGGGAACAAAATCAAAGCCTGGTAAGATTGTGGTAGGCTTGTTCATCAATTCCGGTCGTCATCGCCACTGTGAATCATCATCAGTTGTGTGTTGAATGATTGTTTTTGTTTCTCTATTTTGGCAAAAGACAGTGATATTTTCCCTTTTCTTCTAATTTTTATGTATTGGAGGTTGGGATTTAGGACTCCTCAATTATTTTACAAGTGGGTTGGTGTAGATAGATAAATCAGGAAAATATTGTGAAGCATTTTCTTCCTTTAGGAGCAACGAAGAATGGTGGTCTCTGTATTGGTTGCTTTGTTACTCTCATCTTACTGCCCGACTCTAATTGGAATTATTGAATGTTGTTAACTCTGGATGCAATTAATTTAGTTTGGAATGTCATTTGAGTTCAAACATATGACCTTTTGGTCGAGAATGTCTTAATTAGTTGAATTATATTCA

mRNA sequence

CTTAATTAAAGAAAATAAACAAATAAAATATTTTAAAAAAAAATGAACGAAGCAAGTATCAAGTGTAGCCAAGCGTAGGATAAGAAACAGTGGCCCATTTGTATACAAACGTTTTGGCGCAGTCGATCGGTCCCAATCGGCCAATCTCCGCGCAAAATCATTGAGAATCGGTTTTCATTTCTCTCTTTTTCTCTCCGTTCGATGTCGCCGACGACTTGCTAAGCTTCATTAAGGGAATCCAATTTCGTTGAAAGATTCTGGAAATCGATGGCTGCACCACCGGCTAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATAAGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACTGCTGGTCAAGAGCGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTCTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAATAACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAAGGTCAAGCCCTTGCTGATGAGTATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGAAGTTTTCTTTTCGATTGGAAGGGACATTAAGCAAAGGCTTGCAGACACCGATTCGAAGGCAGAGCCTCAAACAATCAAAATAAACAATCCAGACGCAGCAGCAGGAGATGGTCAAGCCACTCAAAAGTCAGCTTGCTGTGGCTCGTAAAGTCGTAGCAGAAGATCGAACCAAGCGAAAAACGCCCTTTATATCGTGGTGGTACCTTCTGGGAACAAAATCAAAGCCTGGTAAGATTGTGGTAGGCTTGTTCATCAATTCCGGTCGTCATCGCCACTGTGAATCATCATCAGTTGTGTGTTGAATGATTGTTTTTGTTTCTCTATTTTGGCAAAAGACAGTGATATTTTCCCTTTTCTTCTAATTTTTATGTATTGGAGGTTGGGATTTAGGACTCCTCAATTATTTTACAAGTGGGTTGGTGTAGATAGATAAATCAGGAAAATATTGTGAAGCATTTTCTTCCTTTAGGAGCAACGAAGAATGGTGGTCTCTGTATTGGTTGCTTTGTTACTCTCATCTTACTGCCCGACTCTAATTGGAATTATTGAATGTTGTTAACTCTGGATGCAATTAATTTAGTTTGGAATGTCATTTGAGTTCAAACATATGACCTTTTGGTCGAGAATGTCTTAATTAGTTGAATTATATTCA

Coding sequence (CDS)

ATGGCTGCACCACCGGCTAGGGCTCGTGCTGATTACGATTACCTCATTAAGCTTTTGCTTATTGGCGATAGCGGTGTGGGAAAGAGTTGTCTGCTTCTGCGTTTTTCTGATGGTTCTTTCACAACCAGTTTTATCACCACAATTGGTATTGATTTTAAGATAAGAACCATTGAGCTTGATGGGAAGAGAATCAAATTGCAAATCTGGGATACTGCTGGTCAAGAGCGTTTCCGGACTATCACAACAGCTTACTATCGAGGAGCCATGGGAATTCTGCTGGTTTATGATGTCACTGACGAGTCATCTTTCAATAACATTAGGAATTGGATTCGCAATATTGAACAGCATGCATCTGATAATGTGAACAAGATACTGGTAGGAAATAAGGCTGATATGGATGAAAGTAAAAGGGCTGTGCCTACTTCTAAAGGTCAAGCCCTTGCTGATGAGTATGGAATCAAATTCTTTGAAACCAGTGCAAAGACAAACATGAATGTCGAGGAAGTTTTCTTTTCGATTGGAAGGGACATTAAGCAAAGGCTTGCAGACACCGATTCGAAGGCAGAGCCTCAAACAATCAAAATAAACAATCCAGACGCAGCAGCAGGAGATGGTCAAGCCACTCAAAAGTCAGCTTGCTGTGGCTCGTAA

Protein sequence

MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQRLADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS

Homology

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BLAST of Sed0006260 vs. NCBI nr
Match: XP_004147688.1 (ras-related protein RABE1c [Cucumis sativus] >XP_008461674.1 PREDICTED: ras-related protein RABE1c-like [Cucumis melo] >XP_038891057.1 ras-related protein RABE1c-like [Benincasa hispida] >KAA0050319.1 ras-related protein RABE1c-like [Cucumis melo var. makuwa] >KAE8647990.1 hypothetical protein Csa_021425 [Cucumis sativus] >TYK03537.1 ras-related protein RABE1c-like [Cucumis melo var. makuwa])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PDAAAGDGQA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. NCBI nr
Match: XP_022139146.1 (ras-related protein RABE1c-like [Momordica charantia] >XP_022139147.1 ras-related protein RABE1c-like [Momordica charantia] >XP_022139148.1 ras-related protein RABE1c-like [Momordica charantia])

HSP 1 Score: 414.5 bits (1064), Expect = 5.8e-112
Identity = 209/216 (96.76%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI+LD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIDLD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEY IKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYNIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PD AAGDGQA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINKPDGAAGDGQAAQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. NCBI nr
Match: XP_022943018.1 (ras-related protein RABE1c-like [Cucurbita moschata] >XP_022975876.1 ras-related protein RABE1c-like [Cucurbita maxima] >XP_023532106.1 ras-related protein RABE1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 9.8e-112
Identity = 208/216 (96.30%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDSK+EPQTIKIN PDA  GDGQA QKS CCGS
Sbjct: 181 LSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 216

[Close]

BLAST of Sed0006260 vs. NCBI nr
Match: KAG6600049.1 (Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 413.7 bits (1062), Expect = 9.8e-112
Identity = 208/216 (96.30%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 94  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 153

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 154 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 213

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSI RDIKQR
Sbjct: 214 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 273

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDSK+EPQTIKIN PDA  GDGQA QKS CCGS
Sbjct: 274 LSDTDSKSEPQTIKINKPDAGGGDGQAAQKSTCCGS 309

[Close]

BLAST of Sed0006260 vs. NCBI nr
Match: XP_024965444.1 (ras-related protein RABE1c [Cynara cardunculus var. scolymus] >XP_024965445.1 ras-related protein RABE1c [Cynara cardunculus var. scolymus])

HSP 1 Score: 413.7 bits (1062), Expect = 9.8e-112
Identity = 207/216 (95.83%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVE+VFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDSKAEP TIKIN PDAAAGDGQ TQKSACCGS
Sbjct: 181 LSDTDSKAEPSTIKINKPDAAAGDGQPTQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-112
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDS+AEP TIKI+  D AAG GQATQKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.9e-110
Identity = 201/216 (93.06%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTD++AEPQTIKIN  D  AG  QATQKSACCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 194/216 (89.81%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LAD+D++ E Q      P   +G+ QA  KSACCGS
Sbjct: 181 LADSDTRQEAQPSITIKPADQSGN-QAAAKSACCGS 215

[Close]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.2e-101
Identity = 186/214 (86.92%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVE VF SI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACC 215
           L +TD+KAEPQ IKI   D AA    A +KSACC
Sbjct: 181 LTETDTKAEPQGIKITKQDTAASSSTA-EKSACC 213

[Close]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 9.0e-100
Identity = 184/215 (85.58%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+VF SI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDA-AAGDGQATQKSACC 215
           L ++D+KAEPQ IKI   DA  A      +KSACC
Sbjct: 181 LTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Sed0006260 vs. ExPASy TrEMBL
Match: A0A5A7U9Z4 (Ras-related protein RABE1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00290 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PDAAAGDGQA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. ExPASy TrEMBL
Match: A0A0A0KLV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182090 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 58  MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 117

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 118 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 177

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 178 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 237

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PDAAAGDGQA QKSACCGS
Sbjct: 238 LADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 273

[Close]

BLAST of Sed0006260 vs. ExPASy TrEMBL
Match: A0A1S3CGK2 (ras-related protein RABE1c-like OS=Cucumis melo OX=3656 GN=LOC103500219 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 212/216 (98.15%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PDAAAGDGQA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. ExPASy TrEMBL
Match: A0A6J1CBT2 (ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111010124 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.8e-112
Identity = 209/216 (96.76%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI+LD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIDLD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEY IKFFETSAKTN+NVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYNIKFFETSAKTNLNVEEVFFSIARDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTIKIN PD AAGDGQA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIKINKPDGAAGDGQAAQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. ExPASy TrEMBL
Match: A0A5B6YZW1 (Putative ras-related protein RABE1c OS=Davidia involucrata OX=16924 GN=Din_006682 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDSKAEPQTI+IN PD AAG  QA QKSACCGS
Sbjct: 181 LADTDSKAEPQTIRINQPDQAAGASQAPQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-113
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDS+AEP TIKI+  D AAG GQATQKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0006260 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-113
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDS+AEP TIKI+  D AAG GQATQKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0006260 vs. TAIR 10
Match: AT3G46060.3 (RAB GTPase homolog 8A )

HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-113
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTN+NVEEVFFSIGRDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           L+DTDS+AEP TIKI+  D AAG GQATQKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Sed0006260 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 404.4 bits (1038), Expect = 5.6e-113
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTN+NVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTDS+AEP TIKI+  D AAG GQATQKSACCGS
Sbjct: 181 LADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of Sed0006260 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-111
Identity = 201/216 (93.06%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120

Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIGRDIKQR 180
           VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTN+NVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180

Query: 181 LADTDSKAEPQTIKINNPDAAAGDGQATQKSACCGS 217
           LADTD++AEPQTIKIN  D  AG  QATQKSACCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of Sed0006260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147688.1	1.8e-113	98.15	ras-related protein RABE1c [Cucumis sativus] >XP_008461674.1 PREDICTED: ras-rela...	[more]
XP_022139146.1	5.8e-112	96.76	ras-related protein RABE1c-like [Momordica charantia] >XP_022139147.1 ras-relate...	[more]
XP_022943018.1	9.8e-112	96.30	ras-related protein RABE1c-like [Cucurbita moschata] >XP_022975876.1 ras-related...	[more]
KAG6600049.1	9.8e-112	96.30	Ras-related protein RABE1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_024965444.1	9.8e-112	95.83	ras-related protein RABE1c [Cynara cardunculus var. scolymus] >XP_024965445.1 ra...	[more]

BLAST of Sed0006260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28186	1.6e-112	94.91	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
O24466	1.9e-110	93.06	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
Q39433	1.7e-103	89.81	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	6.2e-101	86.92	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	9.0e-100	85.58	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of Sed0006260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9Z4	8.7e-114	98.15	Ras-related protein RABE1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KLV7	8.7e-114	98.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182090 PE=4 SV=1	[more]
A0A1S3CGK2	8.7e-114	98.15	ras-related protein RABE1c-like OS=Cucumis melo OX=3656 GN=LOC103500219 PE=4 SV=...	[more]
A0A6J1CBT2	2.8e-112	96.76	ras-related protein RABE1c-like OS=Momordica charantia OX=3673 GN=LOC111010124 P...	[more]
A0A5B6YZW1	3.6e-112	97.22	Putative ras-related protein RABE1c OS=Davidia involucrata OX=16924 GN=Din_00668...	[more]

BLAST of Sed0006260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46060.1	1.1e-113	94.91	RAB GTPase homolog 8A	[more]
AT3G46060.2	1.1e-113	94.91	RAB GTPase homolog 8A	[more]
AT3G46060.3	1.1e-113	94.91	RAB GTPase homolog 8A	[more]
AT5G59840.1	5.6e-113	94.91	Ras-related small GTP-binding family protein	[more]
AT3G53610.1	1.4e-111	93.06	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 155..177 score: 45.83 coord: 39..55 score: 34.3 coord: 57..79 score: 57.68 coord: 16..37 score: 55.38 coord: 119..132 score: 51.25
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..213 e-value: 7.8E-8 score: 42.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 3.8E-106 score: 368.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0024 score: 3.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 17..180 e-value: 3.5E-35 score: 132.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..216
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..214
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 1..214
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..182 score: 11.300058
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..214 score: 38.052444
None	No IPR available	CDD	cd01867	Rab8_Rab10_Rab13_like	coord: 13..180 e-value: 3.93761E-120 score: 336.162
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..179 e-value: 4.9E-14 score: 59.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..178 e-value: 3.0E-66 score: 222.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..216 score: 20.858978
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..214 e-value: 4.3E-75 score: 253.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..188
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..170 e-value: 2.0E-32 score: 110.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006260.1	Sed0006260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding