Sed0006242 (gene) Chayote v1

Overview
NameSed0006242
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG03: 15713371 .. 15714133 (-)
RNA-Seq ExpressionSed0006242
SyntenySed0006242
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGAAGAAACACCAGGCCGATTCCGGCCATCGTGTTCATCAAATGGCGACAAACAAACACCGAATCGCGGCCACCCATTACCGACCTGTCCTGTTCTTCTTCACGTGAGCACCACTGGTTTCTCACTTTCCGCATTCAATTCTCTACCAGATGGGATTCGGTTGATGTTCAGGTACCATACAAAATTTTCGTCACGTTTCGGATTTCTATAGGGTCCTTGCTTCTTTATGCACAATCATTGTGTAAATCTGCTTTTGACACTTTTGTTTCGTTTTGATCTTGAACGATTATTGGCCATTGAGGCTAGATTCTTTTGGGATTTTCACTTGATTGTTCATTTGTGGTTGGAATGTTTTTCCCCTTTTATCAGTTTTTAATATGAACACCTTGAGCTCTATATGTGTTGAAATCTTATCCTTAGAGTTGAAAGACTGTTGCTAATGTTATCCTTTGATGAATCATTACCCTCCTATGCTTTCCATTCCATGCATTATAAAACACTCACATATATAAGATAAACGATATTTGACCTAAATTTGTGATTCAATGCTTAAATTCATGCAAATCTTGATATTATTCAAGTGGGTGCACTGACATCAATTTTCACCTTGTTTTTGTTTTGTTAAAATTAGTGGGGGGGTTTAGTGGAAATTGAATTGAGTAAAGGTTGCAGCACTTAACTAAGTCTTGGGTCTAATTTGATGCAGTTGTAAGCTTAGGATGAAAGTTGATACAACTTGCCAAGTTGAGGGGTAG

mRNA sequence

ATGGCCGCCGAAGAAACACCAGGCCGATTCCGGCCATCGTGTTCATCAAATGGCGACAAACAAACACCGAATCGCGGCCACCCATTACCGACCTGTCCTGTTCTTCTTCACGTGAGCACCACTGGTTTCTCACTTTCCGCATTCAATTCTCTACCAGATGGGATTCGGTTGATGTTCAGTTGTAAGCTTAGGATGAAAGTTGATACAACTTGCCAAGTTGAGGGGTAG

Coding sequence (CDS)

ATGGCCGCCGAAGAAACACCAGGCCGATTCCGGCCATCGTGTTCATCAAATGGCGACAAACAAACACCGAATCGCGGCCACCCATTACCGACCTGTCCTGTTCTTCTTCACGTGAGCACCACTGGTTTCTCACTTTCCGCATTCAATTCTCTACCAGATGGGATTCGGTTGATGTTCAGTTGTAAGCTTAGGATGAAAGTTGATACAACTTGCCAAGTTGAGGGGTAG

Protein sequence

MAAEETPGRFRPSCSSNGDKQTPNRGHPLPTCPVLLHVSTTGFSLSAFNSLPDGIRLMFSCKLRMKVDTTCQVEG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006242.1Sed0006242.1mRNA