Sed0006210 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGCGTCACCAGCTGGTTCCTCCCACTCACGCCATTACTGCCCTTTTCATTTTCTCTCGCTCAGGGTTTTCTTCCATTCCTCTGAATCTTCGTTTCAATGGCGGAATCCGAGCCTAAGAATGGCGCTGCTGAGAAGACCTTGAGTTTCAAGGTTCTTAAGCCTCAACTGCTTGTGGAGGCGCCTAAGGCCAGCGACGCCATCGCGTTCTACAAGGCTGCCTTCGGCGCGGCGGAGGTTAGCCGTACTCTGCATCCGAAGCGCAAGGCTGACCAAGAAGCTCCGGCTATCCTCTCCGCCGAGCTCAGCATCTCTGGCTTTTTCTTCCTTGTCTCTGATGTTTATGTCGATTCTCCTACTGAGTGAGTGTTTGATCTTTTCGTTGCTACTGTTTTCTGTATCTGTTCGTTGTTTTCCTTTGAAATCCCTGATGGTTTAGTCTATATGTTGAACGTGTTTGTTGTTTACTGATTTCTTGTTCCTTGTCTCTGATGTTTCTGATGATTCTGCTACTGAGTGAGTGATTTCGTTATTTTCCTTTGAAATCGCTCACAGTTTAATCTATGTTGCCGTGTTTGTTGTTATCTGATTTTTTGTTCCCTATCTCTAATGTTTTCGACGATTCTACTACAGAGTGAGTGTTTTGTTTGCTACTGTTTTCTGCATCTGTTCGTCATTTTCTTTTGAAATCGCTGATAGTTTAATCTATGTTGAACTTGTTTGTTGTTTACTGAGCTTTTGTTCCTTATCTCTATGTTTTTGACGATTCTGCTGCTGAGTGACTGTTTCGTTTGATTATGTTTTTTTGCATCTGTTAGTTATTTTCCTTTGAAATCCCTCATAGTTTGATCTACACGTTGAACGTGTTTGTTGTTTTCTGATTTTTTGTACTCCTTGCCTGTCTTTTGACGATTCTACTACTGAGCGAGTGGTTCGTTTGATAGTGTATTCTGTATCTGTTCTTTATTTTCCGTTGAAATGGCTAATTGTTTTTATCTCTGATGTTTTTGGTGATTTTGTTACTGAGTGAATGATTTCGTTTGCTATCGTTTTCATTCTCTTCGATTTTGTTTTTCTTTCAAATAACTGAACATTTGTTATGTGATGCATACATTTATGTTTTCTGTTTTTTCGCAATTTTGAATCGCATTGTTTTGACTAGCATTTGATGATCTACTCAAGCTCATGGAACTAGTTTTTGATTTGATTTCATCCGATGCGTACGAAACTTATTTCATACGTTTTGCTTCAGTAACTGCATGTATCTTGACCTAAATGATCTATCAGATCGGTCATCGTTTTCTTTGCATTGTGTCCTGTTTGATTCTTTGATTTCCTGAGCATATTCGTAACTCTAATTTAACTTTTATAAAAATTTTCAGTAAAAAAGATGCTGAACCGAGAGTTATCCTGTTTTTGGAAACGGAAGACTTCGAAGCTGCAGTGGAGAAGGCCTTGAGTGCTGGAGCTCTTCCAGAAGTGTTGGAGATTGCCGAAGGGGATGACTCGTACAATGGCCGTCGTGTCACCAAGCTGATCGATCCGTTCGGATTCGTCTGGATGATTGTTACTCCCAAGGAGAGTCCCGCCAAGGAGACCGCCGTTGATGCGTAACTTCTGCGTACTCTGCTAAACATAACATGCTGTTTTTTTCTATCAATCTTACAAATCTGCTCCTATGTTTTTTAGTATTAAGAAGGTTATAGCTAGAATCTTTGGATTACGGATATCATGATTGCTGACTTTCCTTTCTGCATTCTGTGAACGCTTATGGACGTTTTGATCATGCTTTTACAATTGGCATGATCTCTCTTGTTTTTCATCTTTTTGCTTACAAATTGGTGAAATCTTAGTCTTTTAATGGATAGTGTGTACTGTTTTGAATCATAAAGTGCGCTTGGCTTGCACAATATTCCAGTATCGTTTAAAA GAAGCGTCACCAGCTGGTTCCTCCCACTCACGCCATTACTGCCCTTTTCATTTTCTCTCGCTCAGGGTTTTCTTCCATTCCTCTGAATCTTCGTTTCAATGGCGGAATCCGAGCCTAAGAATGGCGCTGCTGAGAAGACCTTGAGTTTCAAGGTTCTTAAGCCTCAACTGCTTGTGGAGGCGCCTAAGGCCAGCGACGCCATCGCGTTCTACAAGGCTGCCTTCGGCGCGGCGGAGGTTAGCCGTACTCTGCATCCGAAGCGCAAGGCTGACCAAGAAGCTCCGGCTATCCTCTCCGCCGAGCTCAGCATCTCTGGCTTTTTCTTCCTTGTCTCTGATGTTTATGTCGATTCTCCTACTGATAAAAAAGATGCTGAACCGAGAGTTATCCTGTTTTTGGAAACGGAAGACTTCGAAGCTGCAGTGGAGAAGGCCTTGAGTGCTGGAGCTCTTCCAGAAGTGTTGGAGATTGCCGAAGGGGATGACTCGTACAATGGCCGTCGTGTCACCAAGCTGATCGATCCGTTCGGATTCGTCTGGATGATTGTTACTCCCAAGGAGAGTCCCGCCAAGGAGACCGCCGTTGATGCGTAACTTCTGCGTACTCTGCTAAACATAACATGCTGTTTTTTTCTATCAATCTTACAAATCTGCTCCTATGTTTTTTAGTATTAAGAAGGTTATAGCTAGAATCTTTGGATTACGGATATCATGATTGCTGACTTTCCTTTCTGCATTCTGTGAACGCTTATGGACGTTTTGATCATGCTTTTACAATTGGCATGATCTCTCTTGTTTTTCATCTTTTTGCTTACAAATTGGTGAAATCTTAGTCTTTTAATGGATAGTGTGTACTGTTTTGAATCATAAAGTGCGCTTGGCTTGCACAATATTCCAGTATCGTTTAAAA ATGGCGGAATCCGAGCCTAAGAATGGCGCTGCTGAGAAGACCTTGAGTTTCAAGGTTCTTAAGCCTCAACTGCTTGTGGAGGCGCCTAAGGCCAGCGACGCCATCGCGTTCTACAAGGCTGCCTTCGGCGCGGCGGAGGTTAGCCGTACTCTGCATCCGAAGCGCAAGGCTGACCAAGAAGCTCCGGCTATCCTCTCCGCCGAGCTCAGCATCTCTGGCTTTTTCTTCCTTGTCTCTGATGTTTATGTCGATTCTCCTACTGATAAAAAAGATGCTGAACCGAGAGTTATCCTGTTTTTGGAAACGGAAGACTTCGAAGCTGCAGTGGAGAAGGCCTTGAGTGCTGGAGCTCTTCCAGAAGTGTTGGAGATTGCCGAAGGGGATGACTCGTACAATGGCCGTCGTGTCACCAAGCTGATCGATCCGTTCGGATTCGTCTGGATGATTGTTACTCCCAAGGAGAGTCCCGCCAAGGAGACCGCCGTTGATGCGTAA MAESEPKNGAAEKTLSFKVLKPQLLVEAPKASDAIAFYKAAFGAAEVSRTLHPKRKADQEAPAILSAELSISGFFFLVSDVYVDSPTDKKDAEPRVILFLETEDFEAAVEKALSAGALPEVLEIAEGDDSYNGRRVTKLIDPFGFVWMIVTPKESPAKETAVDA Homology
BLAST of Sed0006210 vs. NCBI nr
Match: XP_022941068.1 (uncharacterized protein At5g48480 [Cucurbita moschata]) HSP 1 Score: 208.8 bits (530), Expect = 3.6e-50 Identity = 117/163 (71.78%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Sed0006210 vs. NCBI nr
Match: KAG6608610.1 (hypothetical protein SDJN03_01952, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037927.1 hypothetical protein SDJN02_01559 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49 Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 0
BLAST of Sed0006210 vs. NCBI nr
Match: XP_023525296.1 (uncharacterized protein At5g48480 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49 Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0
BLAST of Sed0006210 vs. NCBI nr
Match: XP_022982453.1 (uncharacterized protein At5g48480 [Cucurbita maxima]) HSP 1 Score: 206.1 bits (523), Expect = 2.4e-49 Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of Sed0006210 vs. NCBI nr
Match: XP_022136491.1 (uncharacterized protein At5g48480 [Momordica charantia]) HSP 1 Score: 203.4 bits (516), Expect = 1.5e-48 Identity = 114/165 (69.09%), Postives = 128/165 (77.58%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy Swiss-Prot
Match: Q9LV66 (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana OX=3702 GN=At5g48480 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21 Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy TrEMBL
Match: A0A6J1FR21 (uncharacterized protein At5g48480 OS=Cucurbita moschata OX=3662 GN=LOC111446465 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.8e-50 Identity = 117/163 (71.78%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy TrEMBL
Match: A0A6J1J4V4 (uncharacterized protein At5g48480 OS=Cucurbita maxima OX=3661 GN=LOC111481272 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 116/163 (71.17%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy TrEMBL
Match: A0A6J1C3N1 (uncharacterized protein At5g48480 OS=Momordica charantia OX=3673 GN=LOC111008159 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 7.4e-49 Identity = 114/165 (69.09%), Postives = 128/165 (77.58%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy TrEMBL
Match: A0A5D3E723 (Lactoylglutathione lyase / glyoxalase I family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007810 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 9.1e-47 Identity = 105/160 (65.62%), Postives = 124/160 (77.50%), Query Frame = 0
BLAST of Sed0006210 vs. ExPASy TrEMBL
Match: A0A1S3CRB3 (uncharacterized protein At5g48480 OS=Cucumis melo OX=3656 GN=LOC103503858 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 9.1e-47 Identity = 105/160 (65.62%), Postives = 124/160 (77.50%), Query Frame = 0
BLAST of Sed0006210 vs. TAIR 10
Match: AT5G48480.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 104.4 bits (259), Expect = 9.0e-23 Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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