Homology
BLAST of Sed0006118 vs. NCBI nr
Match:
XP_038882774.1 (pentatricopeptide repeat-containing protein At3g51320 [Benincasa hispida])
HSP 1 Score: 934.9 bits (2415), Expect = 3.4e-268
Identity = 466/583 (79.93%), Postives = 509/583 (87.31%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELDSCL---VPPRLNRTHSLLQSCQ 60
MARISTRKLFR LPLP KS+ +SSS FS+FPE D L PPR NR+HSLLQSCQ
Sbjct: 1 MARISTRKLFRFTHAPLPLPFKSVDRSSSPFSSFPEPDLSLDTTNPPRHNRSHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +LLQIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF I +PNTFCINRVIK
Sbjct: 61 SVRELLQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFRYISVPNTFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+++PL+AVF+YF+WLGNGFRPDSYTFL+LF ACASFGC AS R CHGQAFK GV+
Sbjct: 121 AYSLSTVPLEAVFLYFEWLGNGFRPDSYTFLALFSACASFGCEASGRKCHGQAFKNGVDS 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMY CCG IEL RKVFD+MS+ DLVSWNSIV AYARV DLH+AHDMFD MP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTWDLVSWNSIVTAYARVGDLHSAHDMFDKMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGGNPGCAMKLFR MV GIRGNNTTMVNV GACGRS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNIGIRGNNTTMVNVFGACGRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR + FCVFIDTAL+DMYSKCQ+VSIARRVFD+ML+RNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRNLMNFCVFIDTALVDMYSKCQKVSIARRVFDRMLSRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+LF EM AK RE N E K+ + E V PD+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLREINGETGSGKEFKQYEGKQKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
YFDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPEDNEDFSSESVVWINL
Sbjct: 421 KNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQEAVEILRNMPEDNEDFSSESVVWINL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
LT+CRFVGDVSLGEQIA YLIDMEPKNDSY RLLLNIYAVAG+WEDV+R+KLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDMEPKNDSYNRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSL 570
TMPGCRL+DLKEIVHRLKL GMKET+TV+HKLASEVSL
Sbjct: 541 TMPGCRLIDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSL 583
BLAST of Sed0006118 vs. NCBI nr
Match:
XP_023544620.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 926.4 bits (2393), Expect = 1.2e-265
Identity = 456/588 (77.55%), Postives = 512/588 (87.07%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELDSCL---VPPRLNRTHSLLQSCQ 60
MARI +R+LFR +LP PSKSI + SS F +F E D L PPR NR HSLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTRNPPRHNRCHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L+QIHG+L+ +G+F HHFWANRVLLQASEFGD+VYT+LIF I +PN FCINRVIK
Sbjct: 61 SMRELVQIHGYLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+S+PL+AVFVYFQWLG+GFRPD+YTFLSLFCACAS GC +S R CHGQAFK GV+C
Sbjct: 121 AYSLSSVPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMYACCG IEL RKVFD+MS+ DLVSWNSIV AYARV DLHTAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYACCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN++GACGRS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR S++FCVFIDTAL+DMY KCQRVS+ARR+FD+M+NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+LF EM AK RERN EA KK +DE + V PD+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
N YFDEMIN+F VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPED EDFSSE VVW NL
Sbjct: 421 NNYFDEMINIFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
L +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSLCQLLS 575
T PGCRLVDLKEIVHRLKL GMKET++V+HKLASEVSL ++
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNSVMHKLASEVSLLSTIA 588
BLAST of Sed0006118 vs. NCBI nr
Match:
XP_022132890.1 (pentatricopeptide repeat-containing protein At3g51320 [Momordica charantia])
HSP 1 Score: 926.0 bits (2392), Expect = 1.6e-265
Identity = 458/580 (78.97%), Postives = 506/580 (87.24%), Query Frame = 0
Query: 1 MARISTRKL--FR--ALPLPSKSIHQSSSSFSTFPELDSCLVPPRLNRTHSLLQSCQSLT 60
MARISTR+L FR L LP KSI +SSS F +FPE D L PPR NR+ SLLQSCQS+
Sbjct: 1 MARISTRQLLHFRHATLSLPYKSISRSSSPFCSFPEPD--LNPPRHNRSFSLLQSCQSIR 60
Query: 61 QLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIKAYS 120
+LLQIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF +IK+PNTFCINRV+KAYS
Sbjct: 61 ELLQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTILIFRRIKIPNTFCINRVLKAYS 120
Query: 121 LTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVECGAV 180
L+++P +AVF+YF+WLGNGFRPD+YTFLSLFCACAS GC AS R CHGQAFK GV+C V
Sbjct: 121 LSTVPQEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFKNGVDCVMV 180
Query: 181 LRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMPERS 240
LRNSLIHMY CCGDIEL RKVFD+MS+RDLVSWNSIV AYAR+ DLHTAHD+FD MPER+
Sbjct: 181 LRNSLIHMYGCCGDIELGRKVFDEMSARDLVSWNSIVTAYARIGDLHTAHDLFDEMPERN 240
Query: 241 VVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRSVHG 300
VVSWNLMI EYLRGGNPGCAMKLFR MV GIRGN+TTMVNV+GAC RS R+NEGRSVHG
Sbjct: 241 VVSWNLMIGEYLRGGNPGCAMKLFRIMVKMGIRGNSTTMVNVLGACSRSARLNEGRSVHG 300
Query: 301 FMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGNPED 360
FMYRA ++FC+FIDTALID+YSKCQRVS+ARRVFD+MLNRNLVTWNAMVLGHCL GNPED
Sbjct: 301 FMYRALMKFCIFIDTALIDLYSKCQRVSVARRVFDRMLNRNLVTWNAMVLGHCLQGNPED 360
Query: 361 GLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDANKY 420
GLELF EM AK RER E DH KK RDE V PD+ITFIGVLCAC RAGLL+DA Y
Sbjct: 361 GLELFEEMAAKLRERTGETDHDKKYGRDEGKREVFPDQITFIGVLCACARAGLLKDATSY 420
Query: 421 FDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTS 480
FDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MP DNEDFSSES +WINLLTS
Sbjct: 421 FDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPGDNEDFSSESAIWINLLTS 480
Query: 481 CRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMP 540
CRF GDVSLGEQIANYLI+ EPKN+SYYRLLLNIYAVAGKWEDV RVKLLMKEKRLG P
Sbjct: 481 CRFAGDVSLGEQIANYLINTEPKNESYYRLLLNIYAVAGKWEDVTRVKLLMKEKRLGRTP 540
Query: 541 GCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSL 570
GCRL+DLKEIVHRLK GM+E++TV+ KLASEVSL
Sbjct: 541 GCRLIDLKEIVHRLKFGNLLQEGMEESNTVMLKLASEVSL 578
BLAST of Sed0006118 vs. NCBI nr
Match:
KAG6603895.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 919.1 bits (2374), Expect = 1.9e-263
Identity = 456/588 (77.55%), Postives = 507/588 (86.22%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELDSCL---VPPRLNRTHSLLQSCQ 60
MARI +R+LFR +LP PSK I + S F +F E D L PPR NR HSLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L+QIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF IK+PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLIKVPNAFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+S PL+AVFVYFQWLG GFRPD+YTFLSLFCACASFGC +S R CHGQAFK GV+C
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGAGFRPDTYTFLSLFCACASFGCGSSGRKCHGQAFKNGVDC 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMY CCG IEL RKVFD+MS+ DLVSWNSIV AYARV DL TAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLQTAHDMFDAMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN++GACGRS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR S++FCVFIDTAL+DMY KCQRVS+ARR+FD+M+NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+LF EM AK RERN EA KK +DE + V D+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
N YFDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPED EDFSSE VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
L +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSLCQLLS 575
T PGCRLVDLKEIVHRLKL GMKET+TV+HKLASEVSL ++
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIA 588
BLAST of Sed0006118 vs. NCBI nr
Match:
XP_022950690.1 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita moschata])
HSP 1 Score: 916.8 bits (2368), Expect = 9.5e-263
Identity = 454/588 (77.21%), Postives = 506/588 (86.05%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELDSCL---VPPRLNRTHSLLQSCQ 60
MARI +R+LFR +LP PSK I + S F +F E D L PPR NR HSLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L+QIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF I +PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+S PL+AVFVYFQWLG+GFRPD+YTFLSLFCACAS GC +S R CHGQAFK GV+C
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMY CCG IEL RKVFD+M + DLVSWNSIV AYARV DLHTAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN++GACGRS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR S++FCVFIDTAL+DMY KCQRVS+ARR+FD+M+NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+LF EM AK RERN EA KK +DE + V D+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
N YFDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPED EDFSSE VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
L +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSLCQLLS 575
T PGCRLVDLKEIVHRLKL GMKET+TV+HKLASEVSL ++
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIA 588
BLAST of Sed0006118 vs. ExPASy Swiss-Prot
Match:
Q0WVU0 (Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX=3702 GN=At3g51320 PE=2 SV=1)
HSP 1 Score: 513.1 bits (1320), Expect = 4.2e-144
Identity = 249/520 (47.88%), Postives = 343/520 (65.96%), Query Frame = 0
Query: 48 LLQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFC 107
L++ S+T L Q+H L+ +G F WA R+L +S FGD YT+ I+ I +C
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYC 87
Query: 108 INRVIKAYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAF 167
N V KAY ++S P QA+ YF L GF PDSYTF+SL C+ S ++CHGQA
Sbjct: 88 ANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 147
Query: 168 KYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHD 227
K+G + ++NSL+HMY CCG ++LA+K+F ++ RD+VSWNSI+A R D+ AH
Sbjct: 148 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 207
Query: 228 MFDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFR 287
+FD MP+++++SWN+MIS YL NPG ++ LFR+MV AG +GN +T+V ++ ACGRS R
Sbjct: 208 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 267
Query: 288 VNEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLG 347
+ EGRSVH + R + V IDTALIDMY KC+ V +ARR+FD + RN VTWN M+L
Sbjct: 268 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 327
Query: 348 HCLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNG-VHPDKITFIGVLCACTRA 407
HCLHG PE GLELF MI NG + PD++TF+GVLC C RA
Sbjct: 328 HCLHGRPEGGLELFEAMI---------------------NGMLRPDEVTFVGVLCGCARA 387
Query: 408 GLLEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSES 467
GL+ Y+ M++ F+++PNF H WC+AN+Y +AG ++A E L+++P+ ED + ES
Sbjct: 388 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD--EDVTPES 447
Query: 468 VVWINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLM 527
W NLL+S RF G+ +LGE IA LI+ +P N YY LL+NIY+V G+WEDV RV+ ++
Sbjct: 448 TKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMV 507
Query: 528 KEKRLGTMPGCRLVDLKEIVHRLKLGMKETSTVVHKLASE 567
KE+++G +PGC LVDLKEIVH L+LG KE V + + E
Sbjct: 508 KERKIGRIPGCGLVDLKEIVHGLRLGCKEAEKVFTETSLE 522
BLAST of Sed0006118 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 305.4 bits (781), Expect = 1.3e-81
Identity = 164/505 (32.48%), Postives = 275/505 (54.46%), Query Frame = 0
Query: 49 LQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCI 108
LQ +S + +I+ ++ G+ F +++ + D+ Y +FNQ+ PN F
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 109 NRVIKAYSLTSLPLQAVFVYFQWLGNGFR-PDSYTFLSLFCACASFGCLASARICHGQAF 168
N +I+AY+ SL + +Y Q L F PD +TF +F +CAS G + HG
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 169 KYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHD 228
K+G V N+LI MY D+ A KVFD+M RD++SWNS+++ YAR+ + A
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 229 MFDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFR 288
+F M ++++VSW MIS Y G AM FR+M +AGI + ++++V+ +C +
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 289 VNEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLG 348
+ G+ +H + R + ALI+MYSKC +S A ++F +M +++++W+ M+ G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 349 HCLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAG 408
+ HGN +E F EM + V P+ ITF+G+L AC+ G
Sbjct: 317 YAYHGNAHGAIETFNEM--------------------QRAKVKPNGITFLGLLSACSHVG 376
Query: 409 LLEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESV 468
+ ++ +YFD M +++ P HY CL +V AG +++AVEI ++MP +S
Sbjct: 377 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP-----MKPDSK 436
Query: 469 VWINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMK 528
+W +LL+SCR G++ + ++L+++EP++ Y LL NIYA GKWEDV+R++ +++
Sbjct: 437 IWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIR 496
Query: 529 EKRLGTMPGCRLVDLKEIVHRLKLG 553
+ + PG L+++ IV G
Sbjct: 497 NENMKKTPGGSLIEVNNIVQEFVSG 496
BLAST of Sed0006118 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 303.9 bits (777), Expect = 3.8e-81
Identity = 185/564 (32.80%), Postives = 296/564 (52.48%), Query Frame = 0
Query: 14 PLPSKSIHQSSSSFSTFPELDSCLVPPRLNRTHSLLQSCQSLTQLLQIHGHLVATGIFAH 73
PL + S+ Q + ST L PP + L+ QS+ ++LQIH ++ + H
Sbjct: 5 PLLATSLPQ--NQLSTTATARFRLPPP--EKLAVLIDKSQSVDEVLQIHAAILRHNLLLH 64
Query: 74 HFW--ANRVLLQA-SEFGDVVYTLLIFNQIKLPNTFCINRVIKAYSLTSLPLQAVFVYFQ 133
+ N L +A + G + ++L +F+Q P+ F I S+ L QA +Y Q
Sbjct: 65 PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 124
Query: 134 WLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVECGAVLRNSLIHMYACCGD 193
L + P+ +TF SL +C++ S ++ H K+G+ + L+ +YA GD
Sbjct: 125 LLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 184
Query: 194 IELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMPERSVVSWNLMISEYLRG 253
+ A+KVFD M R LVS +++ YA+ ++ A +FD+M ER +VSWN+MI Y +
Sbjct: 185 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 244
Query: 254 GNPGCAMKLFRKMVMAG-IRGNNTTMVNVIGACGRSFRVNEGRSVHGFMYRASVEFCVFI 313
G P A+ LF+K++ G + + T+V + AC + + GR +H F+ + + V +
Sbjct: 245 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 304
Query: 314 DTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGNPEDGLELFGEMIAKSR 373
T LIDMYSKC + A VF+ +++V WNAM+ G+ +HG +D L LF EM
Sbjct: 305 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM----- 364
Query: 374 ERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGLLEDANKYFDEMINVFRVRPNF 433
G+ P ITFIG L AC AGL+ + + F+ M + ++P
Sbjct: 365 --------------QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 424
Query: 434 AHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTSCRFVGDVSLGEQIA 493
HY CL ++ AG +++A E +++M D ++SV+W ++L SC+ GD LG++IA
Sbjct: 425 EHYGCLVSLLGRAGQLKRAYETIKNMNMD-----ADSVLWSSVLGSCKLHGDFVLGKEIA 484
Query: 494 NYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMPGCRLVDLKEIVHRL 553
YLI + KN Y LL NIYA G +E VA+V+ LMKEK + PG ++++ VH
Sbjct: 485 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 536
Query: 554 KLG------MKETSTVVHKLASEV 568
+ G KE T++ K++ +
Sbjct: 545 RAGDREHSKSKEIYTMLRKISERI 536
BLAST of Sed0006118 vs. ExPASy Swiss-Prot
Match:
Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 5.5e-80
Identity = 177/560 (31.61%), Postives = 286/560 (51.07%), Query Frame = 0
Query: 47 SLLQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQ-ASEFGDVV-YTLLIFNQIKLPN 106
SLL SC++L L QIHG + G+ ++ +++L A D + Y + P+
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 107 TFCINRVIKAYSLTSLPLQAVFVYFQWLGNGF-RPDSYTFLSLFCACASFGCLASARICH 166
F N +++ YS + P +V V+ + + GF PDS++F + A +F L + H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 167 GQAFKYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLH 226
QA K+G+E + +LI MY CG +E ARKVFD+M +LV+WN+++ A R D+
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 227 TAHDMFDAMPERSVVSWNLMISEYLRGGNPGCAMKL------------------------ 286
A ++FD M R+ SWN+M++ Y++ G A ++
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 287 -------FRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRSVHGFMYRASVEFCVFIDTA 346
FR++ AG+ N ++ V+ AC +S G+ +HGF+ +A + V ++ A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 347 LIDMYSKCQRVSIARRVFDKML-NRNLVTWNAMVLGHCLHGNPEDGLELFGEMIAKSRER 406
LIDMYS+C V +AR VF+ M R +V+W +M+ G +HG E+ + LF EM A
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA----- 369
Query: 407 NREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGLLEDANKYFDEMINVFRVRPNFAH 466
GV PD I+FI +L AC+ AGL+E+ YF EM V+ + P H
Sbjct: 370 ---------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 429
Query: 467 YWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTSCRFVGDVSLGEQIANY 526
Y C+ ++Y +G +QKA + + MP ++VW LL +C G++ L EQ+
Sbjct: 430 YGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAEQVKQR 489
Query: 527 LIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMPGCRLVDLKEIVHRLKL 570
L +++P N LL N YA AGKW+DVA ++ M +R+ LV++ + +++
Sbjct: 490 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 544
BLAST of Sed0006118 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 4.4e-77
Identity = 159/499 (31.86%), Postives = 268/499 (53.71%), Query Frame = 0
Query: 52 CQSLTQLLQIHGHLVATGIFAHHFWANRVL-LQASEFGDVVYTLLIFNQIKLPNTFCINR 111
C ++ +L QIH L+ TG+ + A+RVL + D+ Y L+F +I N F N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 112 VIKAYSLTSLPLQAVFVYFQWL--GNGFRPDSYTFLSLFCACASFGCLASARICHGQAFK 171
+I+ +S +S P A+ ++ L +P T+ S+F A G R HG K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 172 YGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDM 231
G+E + +RN+++HMY CG + A ++F M D+V+WNS++ +A+ + A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 232 FDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRV 291
FD MP+R+ VSWN MIS ++R G A+ +FR+M ++ + TMV+++ AC
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 292 NEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGH 351
+GR +H ++ R E + TALIDMY KC + VF+ + L WN+M+LG
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 352 CLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGL 411
+G E ++LF E+ E +G+ PD ++FIGVL AC +G
Sbjct: 335 ANNGFEERAMDLFSEL--------------------ERSGLEPDSVSFIGVLTACAHSGE 394
Query: 412 LEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVV 471
+ A+++F M + + P+ HY + NV AGL+++A ++++MP + ++V+
Sbjct: 395 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-----EDTVI 454
Query: 472 WINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKE 531
W +LL++CR +G+V + ++ A L ++P Y LL N YA G +E+ +LLMKE
Sbjct: 455 WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 508
Query: 532 KRLGTMPGCRLVDLKEIVH 548
+++ GC +++ VH
Sbjct: 515 RQMEKEVGCSSIEVDFEVH 508
BLAST of Sed0006118 vs. ExPASy TrEMBL
Match:
A0A6J1BTT2 (pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=3673 GN=LOC111005621 PE=4 SV=1)
HSP 1 Score: 926.0 bits (2392), Expect = 7.6e-266
Identity = 458/580 (78.97%), Postives = 506/580 (87.24%), Query Frame = 0
Query: 1 MARISTRKL--FR--ALPLPSKSIHQSSSSFSTFPELDSCLVPPRLNRTHSLLQSCQSLT 60
MARISTR+L FR L LP KSI +SSS F +FPE D L PPR NR+ SLLQSCQS+
Sbjct: 1 MARISTRQLLHFRHATLSLPYKSISRSSSPFCSFPEPD--LNPPRHNRSFSLLQSCQSIR 60
Query: 61 QLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIKAYS 120
+LLQIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF +IK+PNTFCINRV+KAYS
Sbjct: 61 ELLQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTILIFRRIKIPNTFCINRVLKAYS 120
Query: 121 LTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVECGAV 180
L+++P +AVF+YF+WLGNGFRPD+YTFLSLFCACAS GC AS R CHGQAFK GV+C V
Sbjct: 121 LSTVPQEAVFLYFEWLGNGFRPDTYTFLSLFCACASVGCGASGRKCHGQAFKNGVDCVMV 180
Query: 181 LRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMPERS 240
LRNSLIHMY CCGDIEL RKVFD+MS+RDLVSWNSIV AYAR+ DLHTAHD+FD MPER+
Sbjct: 181 LRNSLIHMYGCCGDIELGRKVFDEMSARDLVSWNSIVTAYARIGDLHTAHDLFDEMPERN 240
Query: 241 VVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRSVHG 300
VVSWNLMI EYLRGGNPGCAMKLFR MV GIRGN+TTMVNV+GAC RS R+NEGRSVHG
Sbjct: 241 VVSWNLMIGEYLRGGNPGCAMKLFRIMVKMGIRGNSTTMVNVLGACSRSARLNEGRSVHG 300
Query: 301 FMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGNPED 360
FMYRA ++FC+FIDTALID+YSKCQRVS+ARRVFD+MLNRNLVTWNAMVLGHCL GNPED
Sbjct: 301 FMYRALMKFCIFIDTALIDLYSKCQRVSVARRVFDRMLNRNLVTWNAMVLGHCLQGNPED 360
Query: 361 GLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDANKY 420
GLELF EM AK RER E DH KK RDE V PD+ITFIGVLCAC RAGLL+DA Y
Sbjct: 361 GLELFEEMAAKLRERTGETDHDKKYGRDEGKREVFPDQITFIGVLCACARAGLLKDATSY 420
Query: 421 FDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTS 480
FDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MP DNEDFSSES +WINLLTS
Sbjct: 421 FDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPGDNEDFSSESAIWINLLTS 480
Query: 481 CRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMP 540
CRF GDVSLGEQIANYLI+ EPKN+SYYRLLLNIYAVAGKWEDV RVKLLMKEKRLG P
Sbjct: 481 CRFAGDVSLGEQIANYLINTEPKNESYYRLLLNIYAVAGKWEDVTRVKLLMKEKRLGRTP 540
Query: 541 GCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSL 570
GCRL+DLKEIVHRLK GM+E++TV+ KLASEVSL
Sbjct: 541 GCRLIDLKEIVHRLKFGNLLQEGMEESNTVMLKLASEVSL 578
BLAST of Sed0006118 vs. ExPASy TrEMBL
Match:
A0A6J1GGG4 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)
HSP 1 Score: 916.8 bits (2368), Expect = 4.6e-263
Identity = 454/588 (77.21%), Postives = 506/588 (86.05%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELDSCL---VPPRLNRTHSLLQSCQ 60
MARI +R+LFR +LP PSK I + S F +F E D L PPR NR HSLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKYIDRCPSPFCSFAEPDLSLDARNPPRHNRCHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L+QIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF I +PN FCINRVIK
Sbjct: 61 SMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+S PL+AVFVYFQWLG+GFRPD+YTFLSLFCACAS GC +S R CHGQAFK GV+C
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMY CCG IEL RKVFD+M + DLVSWNSIV AYARV DLHTAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN++GACGRS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR S++FCVFIDTAL+DMY KCQRVS+ARR+FD+M+NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+LF EM AK RERN EA KK +DE + V D+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
N YFDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPED EDFSSE VVW NL
Sbjct: 421 NNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPEDIEDFSSELVVWTNL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
L +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSLCQLLS 575
T PGCRLVDLKEIVHRLKL GMKET+TV+HKLASEVSL ++
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLSTIA 588
BLAST of Sed0006118 vs. ExPASy TrEMBL
Match:
A0A6J1ITV7 (pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478374 PE=4 SV=1)
HSP 1 Score: 911.4 bits (2354), Expect = 1.9e-261
Identity = 450/584 (77.05%), Postives = 504/584 (86.30%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPELD---SCLVPPRLNRTHSLLQSCQ 60
MARI +R+LFR +LP PSKSI + SS F +F E D + PPR NR HSLLQSCQ
Sbjct: 1 MARIYSRQLFRFTRASLPPPSKSIDRCSSPFCSFAEPDLSLDTINPPRHNRCHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L+QIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF I +PN FCINRVIK
Sbjct: 61 SIRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFKLINVPNAFCINRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+S PL+AVFVYFQWLG+GFRPD+YTFLSLFCACAS GC +S R CHGQAFK GV+C
Sbjct: 121 AYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSSGRKCHGQAFKNGVDC 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VLRNSLIHMY CCG IEL RKVFD+MS+ DLVSWNSIV AYARV DLHTAHDMFDAMP
Sbjct: 181 VMVLRNSLIHMYGCCGYIELGRKVFDEMSTLDLVSWNSIVTAYARVGDLHTAHDMFDAMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN++GACGRS +NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNILGACGRSASLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYR S +FCVFI TAL+DMY KCQRV IARR+FD+M NRNLVTWNAMVLGHCLHGN
Sbjct: 301 VHGFMYRTSTKFCVFIGTALVDMYGKCQRVCIARRLFDRMPNRNLVTWNAMVLGHCLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
PEDGL+L+ EM AK RERN EA KK +DE + V PD+ITFIGVLCAC RAGLLEDA
Sbjct: 361 PEDGLKLYEEMAAKLRERNGEAGSGKKFKQDEGERKVFPDQITFIGVLCACARAGLLEDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
N YFDEMINVF V+PNFAHYWCLANVYVAAGLIQ+AVEILR+M ED EDFSSE VVW NL
Sbjct: 421 NNYFDEMINVFLVKPNFAHYWCLANVYVAAGLIQQAVEILRNMTEDIEDFSSELVVWTNL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
L +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WEDV+R+K+LMKEKRLG
Sbjct: 481 LATCRFRGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWEDVSRIKVLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLG--MKETSTVVHKLASEVSLCQLLS 575
T PGCRLVDLKEIVHRLKLG ++ET+TV+HKLASEVSL ++
Sbjct: 541 TFPGCRLVDLKEIVHRLKLGNLLQETNTVMHKLASEVSLLSTIA 584
BLAST of Sed0006118 vs. ExPASy TrEMBL
Match:
A0A6J1GFI6 (pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453712 PE=4 SV=1)
HSP 1 Score: 897.9 bits (2319), Expect = 2.2e-257
Identity = 434/543 (79.93%), Postives = 481/543 (88.58%), Query Frame = 0
Query: 39 PPRLNRTHSLLQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFN 98
PPR NR HSLLQSCQS+ +L+QIHGHL+ +G+F HHFWANRVLLQASEFGD+VYT+LIF
Sbjct: 13 PPRHNRCHSLLQSCQSMRELVQIHGHLITSGLFNHHFWANRVLLQASEFGDIVYTVLIFK 72
Query: 99 QIKLPNTFCINRVIKAYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLAS 158
I +PN FCINRVIKAYSL+S PL+AVFVYFQWLG+GFRPD+YTFLSLFCACAS GC +S
Sbjct: 73 LINVPNAFCINRVIKAYSLSSDPLEAVFVYFQWLGDGFRPDTYTFLSLFCACASIGCGSS 132
Query: 159 ARICHGQAFKYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYAR 218
R CHGQAFK GV+C VLRNSLIHMY CCG IEL RKVFD+M + DLVSWNSIV AYAR
Sbjct: 133 GRKCHGQAFKNGVDCVMVLRNSLIHMYGCCGHIELGRKVFDEMLTLDLVSWNSIVTAYAR 192
Query: 219 VKDLHTAHDMFDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNV 278
V DLHTAHDMFDAMPER+VVSWNLMISEYLRGG+PGCAMKLFR M+ GIRGN+TTMVN+
Sbjct: 193 VGDLHTAHDMFDAMPERNVVSWNLMISEYLRGGSPGCAMKLFRNMMKIGIRGNSTTMVNI 252
Query: 279 IGACGRSFRVNEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNL 338
+GACGRS R+NEGRSVHGFMYR S++FCVFIDTAL+DMY KCQRVS+ARR+FD+M+NRNL
Sbjct: 253 LGACGRSARLNEGRSVHGFMYRTSMKFCVFIDTALVDMYGKCQRVSVARRLFDRMVNRNL 312
Query: 339 VTWNAMVLGHCLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFI 398
VTWNAMVLGHCLHGNPEDGL+LF EM AK RERN EA KK +DE + V D+ITFI
Sbjct: 313 VTWNAMVLGHCLHGNPEDGLKLFEEMAAKLRERNGEAGSGKKFKQDEGERKVFLDQITFI 372
Query: 399 GVLCACTRAGLLEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPE 458
GVLCAC RAGLLEDAN YFDEMINVF VRPNFAHYWCLANVYVAAGLIQ+AVEILR+MPE
Sbjct: 373 GVLCACARAGLLEDANNYFDEMINVFLVRPNFAHYWCLANVYVAAGLIQQAVEILRNMPE 432
Query: 459 DNEDFSSESVVWINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWE 518
D EDFSSE VVW NLL +CRF GDVSLGEQIANYLIDMEPKN+SYYRLLLNIYAVAG+WE
Sbjct: 433 DIEDFSSELVVWTNLLATCRFGGDVSLGEQIANYLIDMEPKNESYYRLLLNIYAVAGRWE 492
Query: 519 DVARVKLLMKEKRLGTMPGCRLVDLKEIVHRLKL------GMKETSTVVHKLASEVSLCQ 575
DV+R+K+LMKEKRLGT PGCRLVDLKEIVHRLKL GMKET+TV+HKLASEVSL
Sbjct: 493 DVSRIKVLMKEKRLGTFPGCRLVDLKEIVHRLKLGNLLQEGMKETNTVMHKLASEVSLLS 552
BLAST of Sed0006118 vs. ExPASy TrEMBL
Match:
A0A0A0KMJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507160 PE=4 SV=1)
HSP 1 Score: 892.5 bits (2305), Expect = 9.3e-256
Identity = 439/575 (76.35%), Postives = 492/575 (85.57%), Query Frame = 0
Query: 1 MARISTRKLFR----ALPLPSKSIHQSSSSFSTFPE---LDSCLVPPRLNRTHSLLQSCQ 60
MARISTR LFR LPLP KS+ +SSS FS+FPE PPR N++HSLLQSCQ
Sbjct: 1 MARISTRLLFRFTHFPLPLPFKSVDRSSSPFSSFPEPVHSPDTTNPPRHNQSHSLLQSCQ 60
Query: 61 SLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCINRVIK 120
S+ +L Q HGHL+ +G+F HFWANRVLLQASEFGD+VYT+LIF IK+PNTFC+NRVIK
Sbjct: 61 SVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRHIKVPNTFCVNRVIK 120
Query: 121 AYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVEC 180
AYSL+++PL+AVFVYF+WLGNG RPDSYTFLSLF ACASFGC AS R CHGQAFK GV+
Sbjct: 121 AYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDS 180
Query: 181 GAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMP 240
VL NSLIHMY CC IEL RKVFD+MS++DLVSWNSIV AYARV DL+TAHDMFD MP
Sbjct: 181 VMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARVGDLYTAHDMFDVMP 240
Query: 241 ERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRS 300
ER+VVSWNLMISEYLRGGNPGCAMKLFR MV GIRGNNTTMVNV+ AC RS R+NEGRS
Sbjct: 241 ERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSRSARLNEGRS 300
Query: 301 VHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGN 360
VHGFMYRAS++FCVFI+TAL+DMYSKC RVS+ARRVFD+++ RNLVTWNAM+LGH LHGN
Sbjct: 301 VHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLHGN 360
Query: 361 PEDGLELFGEMIAKSRERNREADHVKKIARDE-DNGVHPDKITFIGVLCACTRAGLLEDA 420
P+DGLELF EM+ + RE N E + KK +DE V PD+ITFIGVLCAC RAGLL+DA
Sbjct: 361 PKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDA 420
Query: 421 NKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINL 480
YFDEMINVF VRPNF HYWCLANVYVA GLI++AVEILR+MPEDNEDFSSESVVWI+L
Sbjct: 421 ENYFDEMINVFLVRPNFGHYWCLANVYVAVGLIEQAVEILRNMPEDNEDFSSESVVWIDL 480
Query: 481 LTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLG 540
LT+CRFVGDVSLGEQIA YLIDMEPKNDSYYRLLLNIYAVAG+WEDV+R+KLLMKEKRLG
Sbjct: 481 LTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKRLG 540
Query: 541 TMPGCRLVDLKEIVHRLKLG------MKETSTVVH 562
TM GCRLVDLKEIVH LKLG MKET+TV+H
Sbjct: 541 TMSGCRLVDLKEIVHSLKLGNHLQERMKETNTVIH 575
BLAST of Sed0006118 vs. TAIR 10
Match:
AT3G51320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 513.1 bits (1320), Expect = 2.9e-145
Identity = 249/520 (47.88%), Postives = 343/520 (65.96%), Query Frame = 0
Query: 48 LLQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFC 107
L++ S+T L Q+H L+ +G F WA R+L +S FGD YT+ I+ I +C
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYC 87
Query: 108 INRVIKAYSLTSLPLQAVFVYFQWLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAF 167
N V KAY ++S P QA+ YF L GF PDSYTF+SL C+ S ++CHGQA
Sbjct: 88 ANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 147
Query: 168 KYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHD 227
K+G + ++NSL+HMY CCG ++LA+K+F ++ RD+VSWNSI+A R D+ AH
Sbjct: 148 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 207
Query: 228 MFDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFR 287
+FD MP+++++SWN+MIS YL NPG ++ LFR+MV AG +GN +T+V ++ ACGRS R
Sbjct: 208 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 267
Query: 288 VNEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLG 347
+ EGRSVH + R + V IDTALIDMY KC+ V +ARR+FD + RN VTWN M+L
Sbjct: 268 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 327
Query: 348 HCLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNG-VHPDKITFIGVLCACTRA 407
HCLHG PE GLELF MI NG + PD++TF+GVLC C RA
Sbjct: 328 HCLHGRPEGGLELFEAMI---------------------NGMLRPDEVTFVGVLCGCARA 387
Query: 408 GLLEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSES 467
GL+ Y+ M++ F+++PNF H WC+AN+Y +AG ++A E L+++P+ ED + ES
Sbjct: 388 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD--EDVTPES 447
Query: 468 VVWINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLM 527
W NLL+S RF G+ +LGE IA LI+ +P N YY LL+NIY+V G+WEDV RV+ ++
Sbjct: 448 TKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMV 507
Query: 528 KEKRLGTMPGCRLVDLKEIVHRLKLGMKETSTVVHKLASE 567
KE+++G +PGC LVDLKEIVH L+LG KE V + + E
Sbjct: 508 KERKIGRIPGCGLVDLKEIVHGLRLGCKEAEKVFTETSLE 522
BLAST of Sed0006118 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 305.4 bits (781), Expect = 9.3e-83
Identity = 164/505 (32.48%), Postives = 275/505 (54.46%), Query Frame = 0
Query: 49 LQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQASEFGDVVYTLLIFNQIKLPNTFCI 108
LQ +S + +I+ ++ G+ F +++ + D+ Y +FNQ+ PN F
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 109 NRVIKAYSLTSLPLQAVFVYFQWLGNGFR-PDSYTFLSLFCACASFGCLASARICHGQAF 168
N +I+AY+ SL + +Y Q L F PD +TF +F +CAS G + HG
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 169 KYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHD 228
K+G V N+LI MY D+ A KVFD+M RD++SWNS+++ YAR+ + A
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 229 MFDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFR 288
+F M ++++VSW MIS Y G AM FR+M +AGI + ++++V+ +C +
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 289 VNEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLG 348
+ G+ +H + R + ALI+MYSKC +S A ++F +M +++++W+ M+ G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 349 HCLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAG 408
+ HGN +E F EM + V P+ ITF+G+L AC+ G
Sbjct: 317 YAYHGNAHGAIETFNEM--------------------QRAKVKPNGITFLGLLSACSHVG 376
Query: 409 LLEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESV 468
+ ++ +YFD M +++ P HY CL +V AG +++AVEI ++MP +S
Sbjct: 377 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP-----MKPDSK 436
Query: 469 VWINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMK 528
+W +LL+SCR G++ + ++L+++EP++ Y LL NIYA GKWEDV+R++ +++
Sbjct: 437 IWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIR 496
Query: 529 EKRLGTMPGCRLVDLKEIVHRLKLG 553
+ + PG L+++ IV G
Sbjct: 497 NENMKKTPGGSLIEVNNIVQEFVSG 496
BLAST of Sed0006118 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 303.9 bits (777), Expect = 2.7e-82
Identity = 185/564 (32.80%), Postives = 296/564 (52.48%), Query Frame = 0
Query: 14 PLPSKSIHQSSSSFSTFPELDSCLVPPRLNRTHSLLQSCQSLTQLLQIHGHLVATGIFAH 73
PL + S+ Q + ST L PP + L+ QS+ ++LQIH ++ + H
Sbjct: 5 PLLATSLPQ--NQLSTTATARFRLPPP--EKLAVLIDKSQSVDEVLQIHAAILRHNLLLH 64
Query: 74 HFW--ANRVLLQA-SEFGDVVYTLLIFNQIKLPNTFCINRVIKAYSLTSLPLQAVFVYFQ 133
+ N L +A + G + ++L +F+Q P+ F I S+ L QA +Y Q
Sbjct: 65 PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 124
Query: 134 WLGNGFRPDSYTFLSLFCACASFGCLASARICHGQAFKYGVECGAVLRNSLIHMYACCGD 193
L + P+ +TF SL +C++ S ++ H K+G+ + L+ +YA GD
Sbjct: 125 LLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 184
Query: 194 IELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDMFDAMPERSVVSWNLMISEYLRG 253
+ A+KVFD M R LVS +++ YA+ ++ A +FD+M ER +VSWN+MI Y +
Sbjct: 185 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 244
Query: 254 GNPGCAMKLFRKMVMAG-IRGNNTTMVNVIGACGRSFRVNEGRSVHGFMYRASVEFCVFI 313
G P A+ LF+K++ G + + T+V + AC + + GR +H F+ + + V +
Sbjct: 245 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 304
Query: 314 DTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGHCLHGNPEDGLELFGEMIAKSR 373
T LIDMYSKC + A VF+ +++V WNAM+ G+ +HG +D L LF EM
Sbjct: 305 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM----- 364
Query: 374 ERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGLLEDANKYFDEMINVFRVRPNF 433
G+ P ITFIG L AC AGL+ + + F+ M + ++P
Sbjct: 365 --------------QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 424
Query: 434 AHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTSCRFVGDVSLGEQIA 493
HY CL ++ AG +++A E +++M D ++SV+W ++L SC+ GD LG++IA
Sbjct: 425 EHYGCLVSLLGRAGQLKRAYETIKNMNMD-----ADSVLWSSVLGSCKLHGDFVLGKEIA 484
Query: 494 NYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMPGCRLVDLKEIVHRL 553
YLI + KN Y LL NIYA G +E VA+V+ LMKEK + PG ++++ VH
Sbjct: 485 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 536
Query: 554 KLG------MKETSTVVHKLASEV 568
+ G KE T++ K++ +
Sbjct: 545 RAGDREHSKSKEIYTMLRKISERI 536
BLAST of Sed0006118 vs. TAIR 10
Match:
AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 300.1 bits (767), Expect = 3.9e-81
Identity = 177/560 (31.61%), Postives = 286/560 (51.07%), Query Frame = 0
Query: 47 SLLQSCQSLTQLLQIHGHLVATGIFAHHFWANRVLLQ-ASEFGDVV-YTLLIFNQIKLPN 106
SLL SC++L L QIHG + G+ ++ +++L A D + Y + P+
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 107 TFCINRVIKAYSLTSLPLQAVFVYFQWLGNGF-RPDSYTFLSLFCACASFGCLASARICH 166
F N +++ YS + P +V V+ + + GF PDS++F + A +F L + H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 167 GQAFKYGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLH 226
QA K+G+E + +LI MY CG +E ARKVFD+M +LV+WN+++ A R D+
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 227 TAHDMFDAMPERSVVSWNLMISEYLRGGNPGCAMKL------------------------ 286
A ++FD M R+ SWN+M++ Y++ G A ++
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 287 -------FRKMVMAGIRGNNTTMVNVIGACGRSFRVNEGRSVHGFMYRASVEFCVFIDTA 346
FR++ AG+ N ++ V+ AC +S G+ +HGF+ +A + V ++ A
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 347 LIDMYSKCQRVSIARRVFDKML-NRNLVTWNAMVLGHCLHGNPEDGLELFGEMIAKSRER 406
LIDMYS+C V +AR VF+ M R +V+W +M+ G +HG E+ + LF EM A
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA----- 369
Query: 407 NREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGLLEDANKYFDEMINVFRVRPNFAH 466
GV PD I+FI +L AC+ AGL+E+ YF EM V+ + P H
Sbjct: 370 ---------------YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 429
Query: 467 YWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVVWINLLTSCRFVGDVSLGEQIANY 526
Y C+ ++Y +G +QKA + + MP ++VW LL +C G++ L EQ+
Sbjct: 430 YGCMVDLYGRSGKLQKAYDFICQMP-----IPPTAIVWRTLLGACSSHGNIELAEQVKQR 489
Query: 527 LIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKEKRLGTMPGCRLVDLKEIVHRLKL 570
L +++P N LL N YA AGKW+DVA ++ M +R+ LV++ + +++
Sbjct: 490 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 544
BLAST of Sed0006118 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 290.4 bits (742), Expect = 3.1e-78
Identity = 159/499 (31.86%), Postives = 268/499 (53.71%), Query Frame = 0
Query: 52 CQSLTQLLQIHGHLVATGIFAHHFWANRVL-LQASEFGDVVYTLLIFNQIKLPNTFCINR 111
C ++ +L QIH L+ TG+ + A+RVL + D+ Y L+F +I N F N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 112 VIKAYSLTSLPLQAVFVYFQWL--GNGFRPDSYTFLSLFCACASFGCLASARICHGQAFK 171
+I+ +S +S P A+ ++ L +P T+ S+F A G R HG K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 172 YGVECGAVLRNSLIHMYACCGDIELARKVFDDMSSRDLVSWNSIVAAYARVKDLHTAHDM 231
G+E + +RN+++HMY CG + A ++F M D+V+WNS++ +A+ + A ++
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 232 FDAMPERSVVSWNLMISEYLRGGNPGCAMKLFRKMVMAGIRGNNTTMVNVIGACGRSFRV 291
FD MP+R+ VSWN MIS ++R G A+ +FR+M ++ + TMV+++ AC
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 292 NEGRSVHGFMYRASVEFCVFIDTALIDMYSKCQRVSIARRVFDKMLNRNLVTWNAMVLGH 351
+GR +H ++ R E + TALIDMY KC + VF+ + L WN+M+LG
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 352 CLHGNPEDGLELFGEMIAKSRERNREADHVKKIARDEDNGVHPDKITFIGVLCACTRAGL 411
+G E ++LF E+ E +G+ PD ++FIGVL AC +G
Sbjct: 335 ANNGFEERAMDLFSEL--------------------ERSGLEPDSVSFIGVLTACAHSGE 394
Query: 412 LEDANKYFDEMINVFRVRPNFAHYWCLANVYVAAGLIQKAVEILRSMPEDNEDFSSESVV 471
+ A+++F M + + P+ HY + NV AGL+++A ++++MP + ++V+
Sbjct: 395 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-----EDTVI 454
Query: 472 WINLLTSCRFVGDVSLGEQIANYLIDMEPKNDSYYRLLLNIYAVAGKWEDVARVKLLMKE 531
W +LL++CR +G+V + ++ A L ++P Y LL N YA G +E+ +LLMKE
Sbjct: 455 WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 508
Query: 532 KRLGTMPGCRLVDLKEIVH 548
+++ GC +++ VH
Sbjct: 515 RQMEKEVGCSSIEVDFEVH 508
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882774.1 | 3.4e-268 | 79.93 | pentatricopeptide repeat-containing protein At3g51320 [Benincasa hispida] | [more] |
XP_023544620.1 | 1.2e-265 | 77.55 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita pepo... | [more] |
XP_022132890.1 | 1.6e-265 | 78.97 | pentatricopeptide repeat-containing protein At3g51320 [Momordica charantia] | [more] |
KAG6603895.1 | 1.9e-263 | 77.55 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022950690.1 | 9.5e-263 | 77.21 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 [Cucurbita mosc... | [more] |
Match Name | E-value | Identity | Description | |
Q0WVU0 | 4.2e-144 | 47.88 | Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 1.3e-81 | 32.48 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 3.8e-81 | 32.80 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Q9CA54 | 5.5e-80 | 31.61 | Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... | [more] |
Q9SJG6 | 4.4e-77 | 31.86 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BTT2 | 7.6e-266 | 78.97 | pentatricopeptide repeat-containing protein At3g51320 OS=Momordica charantia OX=... | [more] |
A0A6J1GGG4 | 4.6e-263 | 77.21 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1ITV7 | 1.9e-261 | 77.05 | pentatricopeptide repeat-containing protein At3g51320 isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1GFI6 | 2.2e-257 | 79.93 | pentatricopeptide repeat-containing protein At3g51320 isoform X2 OS=Cucurbita mo... | [more] |
A0A0A0KMJ6 | 9.3e-256 | 76.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507160 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G51320.1 | 2.9e-145 | 47.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 9.3e-83 | 32.48 | mitochondrial editing factor 21 | [more] |
AT4G37380.1 | 2.7e-82 | 32.80 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74630.1 | 3.9e-81 | 31.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G42920.1 | 3.1e-78 | 31.86 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |