Sed0006059 (gene) Chayote v1

Overview


Name	Sed0006059
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding EF-hand family protein
Location	LG09: 5468031 .. 5468916 (+)
RNA-Seq Expression	Sed0006059
Synteny	Sed0006059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGATTTTGAGTGAAGTGTTGACATCAACAATTACAATAATTTCATCCAAACCAATCAATCAATCCTTATATAAATCCCCTTCTTCACACACTCTCTCTCCATCTCTCACATCTTCAAAAATGGATCAAAATCATGAGACCTCAAGTAGAGTAGATGAAGCCTATGAAGACTTATTGCCCGTGATGGCGCAAAAGCTCGATGTCGAGGTATTCGTGGAGGAGCTTTGCAGCGGTTTTCGGCTGCTCGCCGACCCAACGAAAGGGCTGATAACGGCGGAGAGTTTACGACGAAACTCGGCTTTTTTGGGGATGGAAGGGATGAAGGAAGAGGAAGCAGAGGGAATGGTGAGGGAAGGTGATGTTGATGGAGATGGAGCTTTGAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTAACAAGGCCTTTGAACAAGAGTTGAGTAAATCTTCTTGTTTGTGATGTTCTAATTTGTGTTTGTAATTTATTGAAATGTGGATGAAACTCAAACAACTTTGTCTTTGGTTTGTTCAATGGTTTGATTGTAATATGCAATTAAGATCAACAATATCTGTGTAGTTTCTTCATGGTTTGAAAGAATTGTTGATTCATGAAAAAGATCAATGGCGTGTTCACTTAAGTGATTGTAATCCAATTCAATTTACGGTCACGGGTTCGATCTAGAAAATCTTTTACCCTTATCTTATTTGAGTGCAAAGTACGTTCTAGAATTTTGTAATCCCCTCTCCAATAAAAATTTTAAGATAAAATTGCTGATTTTGGTAATATGAATAAAATAAAATAAAAGAGCTTGGTGTAGTTTCTGGAAAATGGAATATGAATAAAAAC

mRNA sequence

GATGATTTTGAGTGAAGTGTTGACATCAACAATTACAATAATTTCATCCAAACCAATCAATCAATCCTTATATAAATCCCCTTCTTCACACACTCTCTCTCCATCTCTCACATCTTCAAAAATGGATCAAAATCATGAGACCTCAAGTAGAGTAGATGAAGCCTATGAAGACTTATTGCCCGTGATGGCGCAAAAGCTCGATGTCGAGGTATTCGTGGAGGAGCTTTGCAGCGGTTTTCGGCTGCTCGCCGACCCAACGAAAGGGCTGATAACGGCGGAGAGTTTACGACGAAACTCGGCTTTTTTGGGGATGGAAGGGATGAAGGAAGAGGAAGCAGAGGGAATGGTGAGGGAAGGTGATGTTGATGGAGATGGAGCTTTGAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTAACAAGGCCTTTGAACAAGAGTTGAGTAAATCTTCTTGTTTGTGATGTTCTAATTTGTGTTTGTAATTTATTGAAATGTGGATGAAACTCAAACAACTTTGTCTTTGGTTTGTTCAATGGTTTGATTGTAATATGCAATTAAGATCAACAATATCTGTGTAGTTTCTTCATGGTTTGAAAGAATTGTTGATTCATGAAAAAGATCAATGGCGTGTTCACTTAAGTGATTGTAATCCAATTCAATTTACGGTCACGGGTTCGATCTAGAAAATCTTTTACCCTTATCTTATTTGAGTGCAAAGTACGTTCTAGAATTTTGTAATCCCCTCTCCAATAAAAATTTTAAGATAAAATTGCTGATTTTGGTAATATGAATAAAATAAAATAAAAGAGCTTGGTGTAGTTTCTGGAAAATGGAATATGAATAAAAAC

Coding sequence (CDS)

ATGATTTTGAGTGAAGTGTTGACATCAACAATTACAATAATTTCATCCAAACCAATCAATCAATCCTTATATAAATCCCCTTCTTCACACACTCTCTCTCCATCTCTCACATCTTCAAAAATGGATCAAAATCATGAGACCTCAAGTAGAGTAGATGAAGCCTATGAAGACTTATTGCCCGTGATGGCGCAAAAGCTCGATGTCGAGGTATTCGTGGAGGAGCTTTGCAGCGGTTTTCGGCTGCTCGCCGACCCAACGAAAGGGCTGATAACGGCGGAGAGTTTACGACGAAACTCGGCTTTTTTGGGGATGGAAGGGATGAAGGAAGAGGAAGCAGAGGGAATGGTGAGGGAAGGTGATGTTGATGGAGATGGAGCTTTGAATGAAATGGAATTTTGTATTTTGATGGTGAGGCTTAGCCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTAACAAGGCCTTTGAACAAGAGTTGAGTAAATCTTCTTGTTTGTGA

Protein sequence

MILSEVLTSTITIISSKPINQSLYKSPSSHTLSPSLTSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELSKSSCL

Homology

[Close]

BLAST of Sed0006059 vs. NCBI nr
Match: KAA0039766.1 (Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.5 bits (563), Expect = 5.5e-54
Identity = 111/124 (89.52%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQNH TSSRVDE YEDLLPVMAQKLDVEVFV ELCSGFRLLAD TKGLITAESLRRNSA
Sbjct: 1   MDQNHNTSSRVDEGYEDLLPVMAQKLDVEVFVSELCSGFRLLADATKGLITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGM E EAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAEAWL KA ++ELS
Sbjct: 61  LLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120

Query: 161 KSSC 165
           KSSC
Sbjct: 121 KSSC 124

[Close]

BLAST of Sed0006059 vs. NCBI nr
Match: XP_004140505.1 (calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein Csa_005589 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 109/125 (87.20%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 41  MDQNHETSSRV-DEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNS 100
           MDQNH TS RV DE YEDLLPVMAQKLDVEVFV ELCSGFRLLAD TKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 101 AFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQEL 160
           A LGMEGM E EAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAEAWL KA ++EL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 161 SKSSC 165
            KSSC
Sbjct: 121 GKSSC 125

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BLAST of Sed0006059 vs. NCBI nr
Match: XP_023547367.1 (calcium-binding protein KIC [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-50
Identity = 106/124 (85.48%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQN  TSSRV E YEDLLPVMAQKLDVEVFV ELCSGFRLLAD +KG+ITAESLRRNSA
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGMK+EEAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAE WL KA ++ELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 161 KSSC 165
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Sed0006059 vs. NCBI nr
Match: XP_023006677.1 (calcium-binding protein KIC [Cucurbita maxima])

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-50
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQN  TSSRV E YEDLLP+MAQKLDVEVFV ELCSGFRLLAD +KG+ITAESLRRNSA
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPLMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGMK+EEAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAE WL KA ++ELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 161 KSSC 165
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Sed0006059 vs. NCBI nr
Match: KAG6575248.1 (Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-50
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQN  TSSRV E YEDLLPVMAQKLDVEVFV ELCSGFRLLAD +KG+ITAESLRRNSA
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGMK+EEA+ MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAE WL KA ++ELS
Sbjct: 61  LLGMEGMKKEEADSMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAECWLQKALDEELS 120

Query: 161 KSSC 165
           K SC
Sbjct: 121 KVSC 124

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BLAST of Sed0006059 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-40
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 37  TSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLR 96
           T   M     ++++++  YED+LPVMA+K+DVE FV ELC GF LLADP + LITAESLR
Sbjct: 4   TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLR 63

Query: 97  RNSAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFE 156
           RNS  LG+EGM +E+A+GMVREGD+DGDGALN+ EFC+LMVRLSP MMEDAE WL KA  
Sbjct: 64  RNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALT 123

Query: 157 QEL 160
           QEL
Sbjct: 124 QEL 126

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BLAST of Sed0006059 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 33  SPSLTSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITA 92
           SP  ++    +N E        ++D  P MA KL  E  +EE+C GF LL D  KG+IT 
Sbjct: 3   SPKSSTRPNQENQEPQ------FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITF 62

Query: 93  ESLRRN-SAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWL 152
           ESLRRN S  LG+  + +++   M+ EGD D DGALN+MEFC+LM RLSP +ME +   +
Sbjct: 63  ESLRRNASTVLGLGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVV 122

Query: 153 NKAFEQE 159
            +  E+E
Sbjct: 123 TEVIEEE 123

[Close]

BLAST of Sed0006059 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 38  SSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRR 97
           +S       T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRR
Sbjct: 2   ASPKSPTRPTQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRR 61

Query: 98  N-SAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFE 157
           N +A LG+  + +E+   M++EGD D DGALN+MEFC+LM RLSP +ME +   + +  E
Sbjct: 62  NAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIE 121

Query: 158 QE 159
           +E
Sbjct: 122 EE 123

[Close]

BLAST of Sed0006059 vs. ExPASy Swiss-Prot
Match: Q12798 (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-08
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 54  AYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSAFLGMEGMKEEEAE 113
           ++ D L VM QK+  +   EE+   FRL  D   G I+ ++L+R +  LG E + +EE +
Sbjct: 85  SFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQ 144

Query: 114 GMVREGDVDGDGALNEMEFCILMVRLS 141
            M+ E D DGDG +NE EF  +M + S
Sbjct: 145 EMIDEADRDGDGEVNEEEFLRIMKKTS 170

[Close]

BLAST of Sed0006059 vs. ExPASy Swiss-Prot
Match: Q32LE3 (Centrin-1 OS=Bos taurus OX=9913 GN=CETN1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 54  AYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSAFLGMEGMKEEEAE 113
           ++ D L VM QK+  +   EE+   FRL  D   G I+ ++L+R +  LG E + +EE +
Sbjct: 85  SFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVAKELG-ENLTDEELQ 144

Query: 114 GMVREGDVDGDGALNEMEFCILM 137
            M+ E D DGDG +NE EF  +M
Sbjct: 145 EMIDEADRDGDGEVNEDEFLRIM 166

[Close]

BLAST of Sed0006059 vs. ExPASy TrEMBL
Match: A0A5A7TCH3 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00290 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54
Identity = 111/124 (89.52%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQNH TSSRVDE YEDLLPVMAQKLDVEVFV ELCSGFRLLAD TKGLITAESLRRNSA
Sbjct: 1   MDQNHNTSSRVDEGYEDLLPVMAQKLDVEVFVSELCSGFRLLADATKGLITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGM E EAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAEAWL KA ++ELS
Sbjct: 61  LLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120

Query: 161 KSSC 165
           KSSC
Sbjct: 121 KSSC 124

[Close]

BLAST of Sed0006059 vs. ExPASy TrEMBL
Match: A0A0A0KAP2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.2e-52
Identity = 109/125 (87.20%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 41  MDQNHETSSRV-DEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNS 100
           MDQNH TS RV DE YEDLLPVMAQKLDVEVFV ELCSGFRLLAD TKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 101 AFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQEL 160
           A LGMEGM E EAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAEAWL KA ++EL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 161 SKSSC 165
            KSSC
Sbjct: 121 GKSSC 125

[Close]

BLAST of Sed0006059 vs. ExPASy TrEMBL
Match: A0A6J1KWH6 (calcium-binding protein KIC OS=Cucurbita maxima OX=3661 GN=LOC111499333 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.8e-50
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQN  TSSRV E YEDLLP+MAQKLDVEVFV ELCSGFRLLAD +KG+ITAESLRRNSA
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPLMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGMK+EEAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAE WL KA ++ELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 161 KSSC 165
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Sed0006059 vs. ExPASy TrEMBL
Match: A0A6J1H361 (calcium-binding protein KIC OS=Cucurbita moschata OX=3662 GN=LOC111459966 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-50
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           MDQN  TSSRV E YEDLLPVMAQKLDVEVFV ELCSGFRLLAD +KG+ITAESLR+NSA
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGMK+EEAE MVREGD+DGDGALNEMEFCILMVRLSPGMMEDAE WL KA ++ELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 161 KSSC 165
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Sed0006059 vs. ExPASy TrEMBL
Match: A0A7C9DCS9 (EF-hand domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.6e-43
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 0


Query: 41  MDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRRNSA 100
           M+ N        + YEDLLPVMA+KLDVE FV ELC GFRLLADP KGLIT ESL RNSA
Sbjct: 1   MENNQTEFKTPPDQYEDLLPVMAEKLDVETFVAELCGGFRLLADPLKGLITPESLMRNSA 60

Query: 101 FLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFEQELS 160
            LGMEGM  EEA+GMVREGD+DGDGALNEMEFC LMVRLSP MM+DAEAWL KA +QEL 
Sbjct: 61  LLGMEGMSREEAQGMVREGDIDGDGALNEMEFCTLMVRLSPAMMQDAEAWLQKALDQELQ 120

Query: 161 KSSC 165
           + SC
Sbjct: 121 RCSC 124

[Close]

BLAST of Sed0006059 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 37  TSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLR 96
           T   M     ++++++  YED+LPVMA+K+DVE FV ELC GF LLADP + LITAESLR
Sbjct: 4   TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLR 63

Query: 97  RNSAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFE 156
           RNS  LG+EGM +E+A+GMVREGD+DGDGALN+ EFC+LMVRLSP MMEDAE WL KA  
Sbjct: 64  RNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALT 123

Query: 157 QEL 160
           QEL
Sbjct: 124 QEL 126

[Close]

BLAST of Sed0006059 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 33  SPSLTSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITA 92
           SP  ++    +N E        ++D  P MA KL  E  +EE+C GF LL D  KG+IT 
Sbjct: 3   SPKSSTRPNQENQEPQ------FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITF 62

Query: 93  ESLRRN-SAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWL 152
           ESLRRN S  LG+  + +++   M+ EGD D DGALN+MEFC+LM RLSP +ME +   +
Sbjct: 63  ESLRRNASTVLGLGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVV 122

Query: 153 NKAFEQE 159
            +  E+E
Sbjct: 123 TEVIEEE 123

[Close]

BLAST of Sed0006059 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 38  SSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSGFRLLADPTKGLITAESLRR 97
           +S       T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRR
Sbjct: 2   ASPKSPTRPTQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRR 61

Query: 98  N-SAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMVRLSPGMMEDAEAWLNKAFE 157
           N +A LG+  + +E+   M++EGD D DGALN+MEFC+LM RLSP +ME +   + +  E
Sbjct: 62  NAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIE 121

Query: 158 QE 159
           +E
Sbjct: 122 EE 123

[Close]

BLAST of Sed0006059 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 19  INQSLYKSPSSHTLSPSLTSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSG 78
           + +SL ++P+   L   +     D N      +D  + + L +MA+K+      EEL   
Sbjct: 36  VMRSLGQNPTEAELQDMINEVDADGN----GTID--FPEFLNLMAKKMKDTDSEEELKEA 95

Query: 79  FRLLADPTKGLITAESLRRNSAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMV 138
           FR+      G I+A  LR     LG E + +EE E M+RE DVDGDG +N  EF  +M+
Sbjct: 96  FRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVEEMIREADVDGDGQINYEEFVKIMM 147

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BLAST of Sed0006059 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 )

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 19  INQSLYKSPSSHTLSPSLTSSKMDQNHETSSRVDEAYEDLLPVMAQKLDVEVFVEELCSG 78
           + +SL ++P+   L   +     D N      +D  + + L +MA+K+      EEL   
Sbjct: 46  VMRSLGQNPTEAELQDMINEVDADGN----GTID--FPEFLNLMAKKMKDTDSEEELKEA 105

Query: 79  FRLLADPTKGLITAESLRRNSAFLGMEGMKEEEAEGMVREGDVDGDGALNEMEFCILMV 138
           FR+      G I+A  LR     LG E + +EE E M+RE DVDGDG +N  EF  +M+
Sbjct: 106 FRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVEEMIREADVDGDGQINYEEFVKIMM 157

The following BLAST results are available for this feature:

BLAST of Sed0006059 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039766.1	5.5e-54	89.52	Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]	[more]
XP_004140505.1	1.5e-51	87.20	calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein C...	[more]
XP_023547367.1	1.6e-50	85.48	calcium-binding protein KIC [Cucurbita pepo subsp. pepo]	[more]
XP_023006677.1	3.7e-50	84.68	calcium-binding protein KIC [Cucurbita maxima]	[more]
KAG6575248.1	3.7e-50	84.68	Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0006059 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPX9	3.6e-40	65.85	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q9LSQ6	1.7e-21	44.09	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
O81831	2.2e-21	45.08	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q12798	3.6e-08	39.08	Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1	[more]
Q32LE3	1.8e-07	39.76	Centrin-1 OS=Bos taurus OX=9913 GN=CETN1 PE=2 SV=1	[more]

BLAST of Sed0006059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCH3	2.7e-54	89.52	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KAP2	7.2e-52	87.20	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=...	[more]
A0A6J1KWH6	1.8e-50	84.68	calcium-binding protein KIC OS=Cucurbita maxima OX=3661 GN=LOC111499333 PE=4 SV=...	[more]
A0A6J1H361	2.3e-50	84.68	calcium-binding protein KIC OS=Cucurbita moschata OX=3662 GN=LOC111459966 PE=4 S...	[more]
A0A7C9DCS9	3.6e-43	73.39	EF-hand domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of Sed0006059 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46600.1	2.5e-41	65.85	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	1.2e-22	44.09	pinoid-binding protein 1	[more]
AT4G27280.1	1.5e-22	45.08	Calcium-binding EF-hand family protein	[more]
AT1G66410.1	3.1e-07	33.61	calmodulin 4	[more]
AT1G66410.2	3.1e-07	33.61	calmodulin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 87..138 e-value: 6.6E-15 score: 54.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 107..142 score: 9.93856
None	No IPR available	GENE3D	1.10.238.10		coord: 52..164 e-value: 2.6E-22 score: 80.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR47319:SF4	CALCIUM-BINDING PROTEIN KIC	coord: 43..161
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 43..161
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 120..132
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 60..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006059.1	Sed0006059.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding