Sed0006054 (gene) Chayote v1

Overview
NameSed0006054
Typegene
OrganismSechium edule (Chayote v1)
DescriptionFAM192A_Fyv6_N domain-containing protein
LocationLG11: 30784111 .. 30789532 (-)
RNA-Seq ExpressionSed0006054
SyntenySed0006054
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACAACCTAAAAAACAAAATAGATTTTTCATACAAATTATGAAGATAGTTGTCTGAAAAAAAAAACGAAGCTTAGTGTATTATTATTTTAGTTTTCTTTTAACCTGAAATTTTCGGGTTTTCGAGCGCATTGCGGTCGAGAGTAGCAAGATCGTCGAAGGGAAGTGACTCTGTAAATCCGTAATCCCTTTTGTTTAATCAGTGCAATTTTGAAGAATTCGAATTGGCGGAAAAGCGATAATGGAGGACGAATCTGGGCGAGCAATCCGGCTTATGAGTTTCGTCTCCGAGGAACAGGTTTTTTTTTTTCCTTCTCCTTTTTTCATGGTTTCCTTTTATTCATTCATATTATAAGCTTTTGTGTTGATTTTTTATATTAATTCAAGCATATTTGTTTTATGCAGTTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAAGATGGCACTGCTTATAGAGATCGACCTCTCTTCGAGGTTTTTCAATGTTGATTCACTTTTATGCCTCATTATGGATTCTGTCTGTGGATTGAAAACCAAATATTTGCTTTCTTAGATGCCGAATGAACATTTAGGTTATTATTATTATTATTATTTAATACTTATTTTGATAGGAAGCGAAAACAATTTTATTGATAATATGGAAGTGTTACTAGAGAACTATTATGGAGAGGTTCAGTTTACAAGAGGGCCTCGGGGGAACAAAGAGTTGAGGGGGGTTCAATCCATACTGACCACTTAGCTAGAAATTAATTTTCTATTGATTTATTTGACATCCCATTGTTGTAGAGTCAGTTGCTACATTTCATGACAATAGTCGAGGTGTTCACAAGTTGGCCCGGACAGTCACATCACGAATATCAAAAATAAAAAATTAAGGTCTCCAAGGAGTGGTCTAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCCTCAAGGTTTTGGGTTCGAGACTCATCTGTGACATCAGTTCTTCGATGTCTCTGATGTCTGGCCTAGGGATGAGTGTGGTTACCCTTATCCCAAAAATAAAAATAAAAAAATAAATAAAAATAAAAAATTAAGTGTTACAAGAGAAGAGGTTCATTGTTTGAGCCTATTATACGAGAATAGCAAGGAAATTACTATCCTAAATCTTTGGAAGTTGAACATCCAACTTATGATCTTAAGAGCGGAGCTTGAGTGTCTAATGGCGATCTCATGCTTGGGCTGCGGTATCCGGGAGATGTAAATATCATTGAGCATTTAGGTTTTTGGAATAAGCTCCTCAGGTTTCAGGGTAAACCAAAGCCATTTGATATAGGGTAATTGTATTGAGTAGCAAATTAGAGTTTGTAATTTGCAAATTTGGCAAATCTTTTAAATGAACTTTTATTACTCTCTTTTTTACCTTTAGATTTCAGTCACATTTGTCTATCACTAATAAATTTATATGTATGCTACTTCATGTACGAGGCTACAAGCATTTTAATGGATAGATTTCAGCACTTTTTCTGTTAACTCGTTTCTCTTCTTTTTGCAGATTTTACAGGAAAATAAAGACAAGCGAGATGCCGAATTTAATGAACGGTTCAAGCACAGTGAGTGCCGAACTGTAATATTAATCGTGTTCTCGATAACATCTCAAAATTGTTGAATGTTTAGTATTAATTCAATCTAGCACAAACTATCAAAGATAGGGGATACATCCATGCAAGGATTGAAATTCATGTATATTCATCTCTTTTACTACAGGACCACCGAAGGCTCTGGATGAGGATGAGACAGAATTTTTGGATAAATTGGAAATGGTGAGACTATTTGTTTTGAGCTGGTTAACTTAAGCATTGAATTGAGATTTGTTATTAGTTCAATATTAAGTATCCAAAGCAGGTTTAGTATTTCAACTCTAGATTGTCAACTGTTCTTTTTTTTTTTAGTTTATTTTTTATTGTCATGCAGTCAAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTCCGCAGTTTTCAAGTAATTATCTTTATGTTTCAAATCAAACCCACTGTAAACTATAATACTTGCTTTTCTTCAAATGACTGATATATTGGATGCCATGGTGAAATTTATAACATAATTCAGAACAAGTGTTTTCTAACGAACATGAACTGTAAGTCTGTAACTTCGCATGTTCTTAATTGGGGGGCTGGTTATTCAGTATGCTTTGCCATATCATTTCCTTAATGGTATGGTAATGGAAGTCTGCATCCCTTGATTAATGCACTATTCTAATTCTAAAAACAAGCACGGTCAAAAAGGTCACATTATAACGAAGGGCTTATCTTTTCTTTTTTTCTTTTTGAATAATAAACTACTACTAATTATAATATAAAAAAGGGCTTAGCAAGAATGAGTTTAAGTGGCTACTTACCTAAGATTTAATATCCTATAGATTACTTGGCTTTCTACTGATTGTAGTAAGATCAAGTGGTTATCCAGTCCCTTGAAAATAATCGATATACACACAAGCTTCCCCACACACTCATGGATATTTAGAAAAACATTATTCTAGTAATCACAAAAAGACGTGTACCTAAGCATGCGTTGTGCCACGTTATAGCCTTATAGGTGAGGCACCTTACCTTGCTAAGTGCACACCAAGTGCTACATTGTTCAAGAAGAAATTAGAGTTGAAATTGAAAAACGAAAGAGAGAAAGTAAAACATAGACAAAAAGTTGTCTCCTTTGTTGGACCTTAAATGTTTCTTTTTCTCCACCAATTGTTAGAAACTTAGGATGCAAGCAAAGTCCTACATTAGCTAGGTAAGGAAGTGACCATGAAAATATAAGTGATAGATAATTATCTCCATTGGTATTGGTATGAGATCTTTTGGATGGAACTAAAAGCAAAACTACAGAAGTTTATGCCTAAAATGGATAATATCACACTATTGTCGAGGATTTCGTTGTCTTGTGACTCTTGACTTTAACACGGTGGTCATATGGAGGATGAGGAACATGGAAATGAAACTAAAGTCAGAGATGTGGTCTATAAGTCTAACAACAAGAAAAATGGGGACGTGGACCTATTTAGTATTTACTATTAAGTGTTATGAGTTCTAATTTAAGTCTTTGCATGATGGGTTACTCTTTGTGGTCGCTGCACTGGTTCTTTTTCTTGTTTGCTTCAACTCACTGAAATCATCATTTATCTTGCTATGAATTGGGCTCACACTATAGCTCCTTCTAAATTCTATTGTTTTCATCATTGAAGGAGCTTTTTGTAATTCTTTTGTAGATATTTTGTAATCATTTTTATTTATCTATGAAAGTCACTGTTTCCTATAAAAAAAAAAAAAGACACTTGCACTTCAAGGGCTGTAGCACGTCAATGCCTTCATGTCTTTGAACATCTGATTGATATAACAATTTATTAAATGTTCTTTGGTGGTGTGATATGACTTCAAAGGTGTGGTCGAATTTTTTTAGGAGTTTGGCTTTGTTTTGGTGAGACCGAGGGACTTCATAGGTATGATGAAAGCTCTTATTGAAGCTCCATCCAATGAGCAATGAGAGTTTTTGTGGCAAGTTCAGGTGTGTGCTATTTTGTGCGAGCTTTCGGGGAGAGAAATAATAGAATATTTAGAGAGATGGAGAAAACCTTGGGTAATGATAATGTTTGGACCTTCGTTAGATTTTATGTTTCTCCATGTAGGTCTTTGTTTCTAGGCTCTTGTATTTGTTCTCTAGGTGGTATTTTACTTGACTGGAGGCTGTTTATTTAAGGTATCCCCTTTCTTTTTTGTGGGTTGTTTTTTTATATGCCCTTAAGTTCTTTCATTTTTTACCCTAAATGAAAACTTGATTTTTTTATTTTCAAGAAACACCCAATTTATTAAATATTTATATAGTAGTGACCAACAGTTGAACCATGACTGACACTAGAATCTAGATATATTACTCCAAAGTCGAATTGATCATCATTGTGACATCTGAGTTACTAGTCATCTCTAGCCGTGATTTAGCTCTAAGATTGACAGTACTGTGGAAAAAAAGATGGCAGATTTTATGCAGTTCAAGATCATGGAGGATGTCCAAATCAATTGATCAAGTTTCCGATTCAAGTGCCAGTCTTTCCCTTGTTATTGATTTAGATGCAGCAGCATTAAGAAACATTGCTTGTAGCCTCAGTGTTGGTTATGGACATTTCCTGTGGCACGGTAGTTGAAGGTTTGAGCTTTGAAGGTGTGTTTCCCTCAAGGTCTCAAGTTTAAGACTCGCTTGTGACATTAATTTGTAGACATCTCCTGTATTTTCATTCCTTTGATGTCCCTCGGTGTCTGGTCTAGGGAGGCGTGGTTACCTCGGGTATGGTGGAGGGACATTCTTCTTACTTTTCTGATAAATAATCAATTGTTACGCTTGTAATTCGGTTTTAGGCTGCCTTTTGCTTTCTGCTTAGTGATAGTACTTCTTTTTCACAAAATACATTCTAAACGCAAGTGCCCACTTTTGAGTTTCTTCACAAGCAGTGGTTCTTGGTGTTCTTTCAGGCAGCAGTAGCAGCACAATCTATTATGCTGAATGAACTGAAGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGTTGGTCTAGTTCAATTCTACGCGCTTCCGGTAGCTTTAGGTGCGAGTAGCCACATCATAAGCAATCAATAAATTCTGGTACCGAAGTGCATCACTTTGCAATTAGATTACTCTCAGTATCAACAATCATAATCATAAATTCTAAATGTCAACTAAAACATATGGATACTACAGATCTCTAGATTGTTATGTGTTTTATTGGAATGTAGCAGATATGATTGTTATCTGATGTGCTTATGTACATAAAAGGGTGAGTACATTCATCGTGGCGGTTTATGCTTTTCGGTTGAGATGTGATCGAGCTGCTGTAAGTTCTGTTATGTAAATTGCCCCCTAATGTCGCCCTCGACTGTCTGCAGGAGAAGGCACCAGTTAGGAGAGAAACTCGGGTGACTCGACCCCCGAGTATGATTATTAAAGTCAAGCCACAGGCAAAAAAGGCCAGGATCGAACCGAGAAGCCCAGAAAAGGCTGGTAGTAAAGCGGAATCAGCAAAAACACCAGATACCATTAGTGATGGGCCTCTTGAAGCTGCAACAATAGGACTAGTTTCATATAGCGATGAAAGTGAAGATGAAGATTAGCGAATCGAATCGGCTGTTAGAAATTCCAAAACAATCACCATATTGTATTTAATTTTTTCTGTGTTGAGATTCTGGAATCAATGAGTTTTTTTTTTCCTTCTTGTGGTAATTGTAGCTTATAAGCTTTGATTATATACATAGAGATGAACCGTTGATTCTTGAAATGATTTTAACATTCCTCAGGGTTAATTAAATCTTGGTGAAATATATGGAGGCTTGATTACCATTATGGTTAAAAA

mRNA sequence

ACACAACCTAAAAAACAAAATAGATTTTTCATACAAATTATGAAGATAGTTGTCTGAAAAAAAAAACGAAGCTTAGTGTATTATTATTTTAGTTTTCTTTTAACCTGAAATTTTCGGGTTTTCGAGCGCATTGCGGTCGAGAGTAGCAAGATCGTCGAAGGGAAGTGACTCTGTAAATCCGTAATCCCTTTTGTTTAATCAGTGCAATTTTGAAGAATTCGAATTGGCGGAAAAGCGATAATGGAGGACGAATCTGGGCGAGCAATCCGGCTTATGAGTTTCGTCTCCGAGGAACAGTTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAAGATGGCACTGCTTATAGAGATCGACCTCTCTTCGAGATTTTACAGGAAAATAAAGACAAGCGAGATGCCGAATTTAATGAACGGTTCAAGCACAGACCACCGAAGGCTCTGGATGAGGATGAGACAGAATTTTTGGATAAATTGGAAATGTCAAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTATGCTGAATGAACTGAAGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAGAAGGCACCAGTTAGGAGAGAAACTCGGGTGACTCGACCCCCGAGTATGATTATTAAAGTCAAGCCACAGGCAAAAAAGGCCAGGATCGAACCGAGAAGCCCAGAAAAGGCTGGTAGTAAAGCGGAATCAGCAAAAACACCAGATACCATTAGTGATGGGCCTCTTGAAGCTGCAACAATAGGACTAGTTTCATATAGCGATGAAAGTGAAGATGAAGATTAGCGAATCGAATCGGCTGTTAGAAATTCCAAAACAATCACCATATTGTATTTAATTTTTTCTGTGTTGAGATTCTGGAATCAATGAGTTTTTTTTTTCCTTCTTGTGGTAATTGTAGCTTATAAGCTTTGATTATATACATAGAGATGAACCGTTGATTCTTGAAATGATTTTAACATTCCTCAGGGTTAATTAAATCTTGGTGAAATATATGGAGGCTTGATTACCATTATGGTTAAAAA

Coding sequence (CDS)

ATGGAGGACGAATCTGGGCGAGCAATCCGGCTTATGAGTTTCGTCTCCGAGGAACAGTTGGATGAAGCCAAGAAAACAAGGGGCGAGCGAGTTGAAGATGGCACTGCTTATAGAGATCGACCTCTCTTCGAGATTTTACAGGAAAATAAAGACAAGCGAGATGCCGAATTTAATGAACGGTTCAAGCACAGACCACCGAAGGCTCTGGATGAGGATGAGACAGAATTTTTGGATAAATTGGAAATGTCAAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTCCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTATGCTGAATGAACTGAAGGAAATAACCCCTCCTGCTCCAGCAGCTCAGGAGAAGGCACCAGTTAGGAGAGAAACTCGGGTGACTCGACCCCCGAGTATGATTATTAAAGTCAAGCCACAGGCAAAAAAGGCCAGGATCGAACCGAGAAGCCCAGAAAAGGCTGGTAGTAAAGCGGAATCAGCAAAAACACCAGATACCATTAGTGATGGGCCTCTTGAAGCTGCAACAATAGGACTAGTTTCATATAGCGATGAAAGTGAAGATGAAGATTAG

Protein sequence

MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNERFKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTPDTISDGPLEAATIGLVSYSDESEDED
Homology
[Close]
BLAST of Sed0006054 vs. NCBI nr
Match: XP_023549588.1 (protein FAM192A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 182/213 (85.45%), Postives = 192/213 (90.14%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+L+E++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEIPNAKAEEDS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT SD PLEAA TIGLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. NCBI nr
Match: XP_022938625.1 (uncharacterized protein LOC111444804 [Cucurbita moschata])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 182/213 (85.45%), Postives = 192/213 (90.14%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+L+E++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT SD PLEAA TIGLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. NCBI nr
Match: KAG7016669.1 (hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 180/213 (84.51%), Postives = 191/213 (89.67%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+L+E++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEEDS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT SD  LEAA TIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 213

[Close]
BLAST of Sed0006054 vs. NCBI nr
Match: XP_022993730.1 (protein FAM192A [Cucurbita maxima])

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+LNE++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKA  +A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT +D PLEAA TIGLVSYSDESEDED
Sbjct: 181 ESVRTHDTSNDRPLEAATTIGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. NCBI nr
Match: KAG6579151.1 (hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-82
Identity = 179/213 (84.04%), Postives = 191/213 (89.67%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+L+E++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARI+PRSPEKAGS+A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIKPRSPEKAGSRAEILNAKAEEDS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT SD  LEAA TIGLVSYSDESED+D
Sbjct: 181 ESVRTHDTSSDRALEAATTIGLVSYSDESEDDD 213

[Close]
BLAST of Sed0006054 vs. ExPASy Swiss-Prot
Match: Q91WE2 (PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 0 

Query: 2   EDESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENK 61
           ED+S   I+   FVSE +LDE +K R E  E              AY  R L+E LQE K
Sbjct: 4   EDDSNLVIK-KRFVSEAELDERRKRRQEEWEKVRKPEDPKECPEEAYDPRSLYERLQEQK 63

Query: 62  DKRDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQA 105
           D++  E+ E+FK +   + LDEDET FLD++   +   E+Q  + + +EL+ +++
Sbjct: 64  DRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELEELKEYRS 117

[Close]
BLAST of Sed0006054 vs. ExPASy Swiss-Prot
Match: Q9GZU8 (PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.0e-04
Identity = 58/225 (25.78%), Postives = 98/225 (43.56%), Query Frame = 0 

Query: 4   ESGRAIRLMSFVSEEQLDEAKKTRGERVE-----------DGTAYRDRPLFEILQENKDK 63
           + G  I    FVSE +LDE +K R E  E               Y  R L+E LQE KD+
Sbjct: 5   DDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQEQKDR 64

Query: 64  RDAEFNERFKHR-PPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSI 123
           +  E+ E+FK +   + LDEDET FLD++   +   E+Q  + + +EL+ ++  +    I
Sbjct: 65  KQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLKKVGI 124

Query: 124 MLNELKEITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQA-------KKARIEPRSPEK 183
                KE+           P+  + + ++   +   VK ++       K+ + +P   +K
Sbjct: 125 SQENKKEVEKKLTV----KPIETKNKFSQAKLLAGAVKHKSSESGNSVKRLKPDPEPDDK 184

Query: 184 AGSKAESAKTPDTISDGP---LEAATI------GLVSYSDESEDE 201
               +      +T   GP     +A +      GL +YS  S+ E
Sbjct: 185 NQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGAYSGSSDSE 225

[Close]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match: A0A6J1FKA5 (uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC111444804 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 182/213 (85.45%), Postives = 192/213 (90.14%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+L+E++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLSEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKAGS+A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSRAEILNAKAEESS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT SD PLEAA TIGLVSYSDESEDED
Sbjct: 181 ESVRTHDTSSDRPLEAATTIGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match: A0A6J1JZC4 (protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.4e-83
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLMSFVSEEQLDEAKKTRGERVEDGTA RDRPL+EIL+ENKDKRDAEFNER
Sbjct: 1   MEDESARAIRLMSFVSEEQLDEAKKTRGERVEDGTAQRDRPLYEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDK E SKREYERQMADADEQELRSFQAAVAAQSI+LNE++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKYETSKREYERQMADADEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKA----------- 180
           PPAPAAQEKAPVR+ET VTRPPSMII+VKPQAKKARIEPRSPEKA  +A           
Sbjct: 121 PPAPAAQEKAPVRKETPVTRPPSMIIRVKPQAKKARIEPRSPEKAVCRAEIPNAKAEESS 180

Query: 181 ESAKTPDTISDGPLEAA-TIGLVSYSDESEDED 202
           ES +T DT +D PLEAA TIGLVSYSDESEDED
Sbjct: 181 ESVRTHDTSNDRPLEAATTIGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match: A0A6J1CXV7 (protein FAM192A OS=Momordica charantia OX=3673 GN=LOC111015581 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDESGRAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL+ENKDKRDAEFNER
Sbjct: 1   MEDESGRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDKLE SKREYERQMADA+E+ELRSFQAAVAAQS ML+ELKE+T
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEEELRSFQAAVAAQSTMLHELKEVT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSK-AESAKTPDTIS 180
           PPAP AQEK  VRRET  TR PSMIIKVKPQAKKARIEPRSPEKA ++ +ES KTP++I 
Sbjct: 121 PPAPTAQEKTSVRRETPATRAPSMIIKVKPQAKKARIEPRSPEKASNEPSESEKTPNSIG 180

Query: 181 DGPLEAATIGLVSYSDESEDED 202
           D P EAATIGLVSYS ESEDED
Sbjct: 181 DRPHEAATIGLVSYSGESEDED 202

[Close]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match: A0A5D3BGC9 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00120 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.0e-81
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL++NKDKRDAEFNER
Sbjct: 31  MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 90

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDKLE SKREYERQMADA+EQELRSFQAAVAAQSI+LNE++EIT
Sbjct: 91  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 150

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE--- 180
           PPAPAAQEKA VRRET V+RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE   
Sbjct: 151 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 210

Query: 181 -SAKTPDTISDGPLEAATI-GLVSYSDESEDED 202
            S KT DT SD PLEAA I GLVSYSDESEDED
Sbjct: 211 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 243

[Close]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match: A0A5A7U2Y6 (Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G001250 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.0e-81
Identity = 180/213 (84.51%), Postives = 190/213 (89.20%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           MEDES RAIRLM+FVSEEQLDEAKKTRGERVEDGTA RDRPLFEIL++NKDKRDAEFNER
Sbjct: 1   MEDESSRAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKDNKDKRDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKEIT 120
           FKHRPPKALDEDETEFLDKLE SKREYERQMADA+EQELRSFQAAVAAQSI+LNE++EIT
Sbjct: 61  FKHRPPKALDEDETEFLDKLETSKREYERQMADAEEQELRSFQAAVAAQSILLNEVREIT 120

Query: 121 PPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGS-------KAE--- 180
           PPAPAAQEKA VRRET V+RPPSMII+VKPQAKKARIEPRSP+ AGS       KAE   
Sbjct: 121 PPAPAAQEKASVRRETPVSRPPSMIIRVKPQAKKARIEPRSPKIAGSITEIPVAKAEEPS 180

Query: 181 -SAKTPDTISDGPLEAATI-GLVSYSDESEDED 202
            S KT DT SD PLEAA I GLVSYSDESEDED
Sbjct: 181 KSVKTLDTNSDRPLEAAAITGLVSYSDESEDED 213

[Close]
BLAST of Sed0006054 vs. TAIR 10
Match: AT3G62140.1 (CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-54
Identity = 124/214 (57.94%), Postives = 155/214 (72.43%), Query Frame = 0 

Query: 1   MEDESGRAIRLMSFVSEEQLDEAKKTRGERVEDGTAYRDRPLFEILQENKDKRDAEFNER 60
           M DE+ + IRL++FVSEEQLDE+KK RGERVEDGT  RDR L+EIL+ENKDK+DAEFNER
Sbjct: 1   MVDETEKPIRLLNFVSEEQLDESKKERGERVEDGTFQRDRALYEILKENKDKKDAEFNER 60

Query: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQMADADEQELRSFQAAVAAQSIMLNELKE-- 120
           FKHRPPKALDEDETEFLDKLEMSKREYERQ+A+ ++++LR+FQAAVAA+S +L+E KE  
Sbjct: 61  FKHRPPKALDEDETEFLDKLEMSKREYERQLANEEDEQLRNFQAAVAARSAILHEPKEAA 120

Query: 121 ITPPAPAAQEKAPVRRETRVTRPPSMIIKVKPQAKKARIEPRSPEKAGSKAESAKTPDTI 180
           + PPAP  +E+ P+ +    TRP   IIKVKPQ KKA+   +  ++     + A   D  
Sbjct: 121 LPPPAPVTKEQKPIGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQA 180

Query: 181 SDGPLEAATIG-----------LVSYSDESEDED 202
           S   ++    G           LVSYSDESED+D
Sbjct: 181 SLDSVKGNVTGKTTEGLQTGLALVSYSDESEDDD 214

The following BLAST results are available for this feature:
BLAST of Sed0006054 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023549588.16.2e-8485.45protein FAM192A [Cucurbita pepo subsp. pepo][more]
XP_022938625.16.2e-8485.45uncharacterized protein LOC111444804 [Cucurbita moschata][more]
KAG7016669.11.2e-8284.51hypothetical protein SDJN02_21779 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022993730.11.5e-8284.51protein FAM192A [Cucurbita maxima][more]
KAG6579151.13.4e-8284.04hypothetical protein SDJN03_23599, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Sed0006054 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q91WE21.3e-0736.52PSME3-interacting protein OS=Mus musculus OX=10090 GN=Psme3ip1 PE=1 SV=1[more]
Q9GZU85.0e-0425.78PSME3-interacting protein OS=Homo sapiens OX=9606 GN=PSME3IP1 PE=1 SV=1[more]
BLAST of Sed0006054 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FKA53.0e-8485.45uncharacterized protein LOC111444804 OS=Cucurbita moschata OX=3662 GN=LOC1114448... [more]
A0A6J1JZC47.4e-8384.51protein FAM192A OS=Cucurbita maxima OX=3661 GN=LOC111489642 PE=4 SV=1[more]
A0A6J1CXV72.1e-8286.63protein FAM192A OS=Momordica charantia OX=3673 GN=LOC111015581 PE=4 SV=1[more]
A0A5D3BGC99.0e-8184.51Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G0012... [more]
A0A5A7U2Y69.0e-8184.51Protein FAM192A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G0012... [more]
BLAST of Sed0006054 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62140.13.2e-5457.94CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..170
NoneNo IPR availablePANTHERPTHR13495:SF1BNAC06G18360D PROTEINcoord: 1..201
IPR019331FAM192A/Fyv6, N-terminalPFAMPF10187FAM192A_Fyv6_Ncoord: 22..102
e-value: 3.9E-16
score: 59.3
IPR039845PSME3-interacting proteinPANTHERPTHR13495NEFA-INTERACTING NUCLEAR PROTEIN NIP30coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006054.1Sed0006054.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus