Sed0006000 (gene) Chayote v1

Overview


Name	Sed0006000
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WRKY protein
Location	LG03: 10532981 .. 10536004 (+)
RNA-Seq Expression	Sed0006000
Synteny	Sed0006000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTTTCCTTGTCTGTCACTTCCTCTACATTTGAAATTCTTCCCTTCTTCTACAATGAAAACCTCACTAACCACCAATACTTCTCTCGACCTTAATTGCAATCCTCCGCCGTACGCCGCCGACGATTCCCCGGCCAGTGACGCAGTTACTCCGCTCGAAGAACAGGTCGGTGTACGAATTAAACCTAAATTACATTTTACTCTTCCGAAACCTAGATGCTTATTTCTCTGTTCTTCATTCTGCAGGCTCCTTCCGTTCTTGACGAGAAATTGAATCGGATCAGTTCGGAGAATCAGAATCTGAATCGGATGCTAGGCGTTGTGTTCGAAAAATACAGTGTTCTGCTAAATCAGGTAACCGATTTGATGATCAATTCGATGAAGCGAAAGGCAGGGTGCGATCATTGCAATTTCTTAGATCGGAGCGGCTCTGGCGCCGATGCGTTCACCGATCGGTATTGCGGCTGCTGTAGCGACGATGATTCGTGTCACAAAAGGCCTAGAGAAAGCAGTAAGACTAAGGTCACGAGAGTTTTGGTTCCGACGCCGATTTCTGATTCAAGCCTGGTATGTAAGCGACATTTCGTTTCGCGATTCGTGTTTTCTGTTGTATGATTCTGTTAGATTGTGGAAAGCAAATCACGAGTCTGTTTCTTGATTTTGTTAGAAGAATTGGAAATGAAATTGAAATCTCGCGATTATATCATAATTGAATAAACTGTTAGTTGATTCGCCAGAATTTGGATGTTACAATTTATGCTGATCAATTTTAGTTTGCAGAAGGAAGAGAGTGTGTAAAGACATTTTGCTTCTGTTATGATTCTCTGTTAGACTGTTGTGGAAGTGGAATCGAAATTGAATCAATAGTTCGTTCGTTCATTGATTTTGTTAGAAGAATTGGAATTGAAATCTCGTGATTATAATGGAACAGTCTGTTGAATTGTTAGTTGATTGGCCCAAATTTTGATGTGTTAAAATTTGTGCTGAATTTTAGTTTGGTGAAAACGAGTATTCTTAACAGAGTCTGTAATTGTAGGTTGTTAAGGATGGATATCAATGGAGAAAATACGGTCAAAAGGTCACTAAAGACAATCCGTCGCCTAGAGCTTACTATAAATGCTCCTTTGCCCCAAGCTGCCCGGTGAAGAGGAAGGTAATTTCCTCGAAGTTTCTTTGGTCTATTTACAGCTCATTTTTTAAATCTTTTTTCTTCCCTCGTTTAATTTTCAACTCGATTGGTTTAATATCATATTCAGCTTTATTTAGACTTCTTCAATACAATTCAAATCATTACGTAAGAAATGTTATCCTCAAATGCTCTTTGACAATATATTCCTAATTGAAATGGATTATCTTGCCAACTAAAGATGAAATCAAGACATCATGTATGACTAGATAACCCTAGCATGTTACTAATTTGAATTTCCTCTCTTCCAAAGTTTTATTGATACCAATAAACTTGACTATCATGGAGTGACTTAGTAGAGCCTTGGGCACGATGGATTCAATTTTGATGGCAATCTAAATAAGAATCAATTTTCTATTGTTTTAAGTCAAACTGTATGTCCCGAGATGGGTGTAAGCTGGTCCAGACAGTCAAGAATATCATTTAAAAAAATGGTACCAATAAAATTATAAAATAAGCCTATTACAACCGTTCTTATATTCTCAACAAAGATTGAGATCATGCATTTTAAAGGTTTGGTATAAGATTGTGTACATGACCAAGAGGCTATAGGTTCCAATGTTTCCTCTTATCTATTTTCTAACTAAAGAAAGTTGAGCAGAAGATTCAACCATTCATATCTAAAACTAATGATTGCATTTGTGCCCTATTTATTGAGCTATGCTGAAATCAGCCCCATCTCTATTTGTTAAATGCTAAAAAAAGAACCAACTAAGTTGCATGCCGTTTGCATGTAATTTGCTTATTCTTTTGTTTTTCCTTGAATAGTACCTACTTATTGATTGTTTTTAGTTAAATAAAATTTGGGGTTATGGAAATTTGAATATGTGTAACAGACTCATTCTCAAGTCACTAAAGTTATTGCTCTATAATTTTAAATAACGTTTTTATTAGATAATATGATTTTTCACCTCTAAATCTATTAGCAACGAAGGAGTAATCTATATTAAATGATGCTTATCAATCCTAGATTGAATCTCAATTTCATTTTATTTTTATTGGATTGATATCTATTTGGACTTTATGAACTCTGTACTTTGTGAATGAGTCCTATAATTATGAGATCCTAACCGTTTTTTCTTGTGTAGTAACTATTTCTTTTGTAGGAAACAAAGGACTCGTATGACGAGTAAATAATGTATTGTTTAAAATCTTTTTCATTCCTTTCCTGAATATTGTTTAAAATCATAATTTGTATATACTACCTTACGCATAAGTAGAGAGCATAACTCAAAGGAGTAATTAGTTTTATTTCCTATATATTTTTATATATTATTTTGATTGAATTGAACATTATGTTTTTTCTTTGGGGGAAACATTTACTATAGGTGCAAAGAAGTGCTGAAGACACATCCTATTTAGTTGTCACGTACGAAGGAGAGCACAATCACATGAAACCTAATTCTGGTGAGATTGAATATCAATTGGTTGAACGACCAATTCAGTTGAATTCAAAGCTGGATTCGTCTATTTCATCACCCCCGTCGTCGGTCATTTCTCATAATTTCGATTTAGCACAGTACCAAAAATGTTCAGTCCCAAAACTTGAATTAAGACCCTCAGCTTCAACCCACCACATCTTACTTCGGCAAATGGCTTCGGCTTTGACCAGCGACCCCAATTTCACAAGAGCTCTTGTCTCCGCCATTACTGAAAGCATGGTCTGAACAAATGTATCGGGCAATGATCATTATTGTTAATTTTATTCAGAATATATTTAGTACTAATAAGTAAATTTTGCTGCTGAAGATAAATTTTCTATTTTTTTTTTAATTTTTGTTTCAATCGTGTTTGGATGTATATGGACGCATTTTTGTTTGTATACCATGGAACAATA

mRNA sequence

ATTTGTTTCCTTGTCTGTCACTTCCTCTACATTTGAAATTCTTCCCTTCTTCTACAATGAAAACCTCACTAACCACCAATACTTCTCTCGACCTTAATTGCAATCCTCCGCCGTACGCCGCCGACGATTCCCCGGCCAGTGACGCAGTTACTCCGCTCGAAGAACAGGCTCCTTCCGTTCTTGACGAGAAATTGAATCGGATCAGTTCGGAGAATCAGAATCTGAATCGGATGCTAGGCGTTGTGTTCGAAAAATACAGTGTTCTGCTAAATCAGGTAACCGATTTGATGATCAATTCGATGAAGCGAAAGGCAGGGTGCGATCATTGCAATTTCTTAGATCGGAGCGGCTCTGGCGCCGATGCGTTCACCGATCGGTATTGCGGCTGCTGTAGCGACGATGATTCGTGTCACAAAAGGCCTAGAGAAAGCAGTAAGACTAAGGTCACGAGAGTTTTGGTTCCGACGCCGATTTCTGATTCAAGCCTGGTTGTTAAGGATGGATATCAATGGAGAAAATACGGTCAAAAGGTCACTAAAGACAATCCGTCGCCTAGAGCTTACTATAAATGCTCCTTTGCCCCAAGCTGCCCGGTGAAGAGGAAGGTGCAAAGAAGTGCTGAAGACACATCCTATTTAGTTGTCACGTACGAAGGAGAGCACAATCACATGAAACCTAATTCTGGTGAGATTGAATATCAATTGGTTGAACGACCAATTCAGTTGAATTCAAAGCTGGATTCGTCTATTTCATCACCCCCGTCGTCGGTCATTTCTCATAATTTCGATTTAGCACAGTACCAAAAATGTTCAGTCCCAAAACTTGAATTAAGACCCTCAGCTTCAACCCACCACATCTTACTTCGGCAAATGGCTTCGGCTTTGACCAGCGACCCCAATTTCACAAGAGCTCTTGTCTCCGCCATTACTGAAAGCATGGTCTGAACAAATGTATCGGGCAATGATCATTATTGTTAATTTTATTCAGAATATATTTAGTACTAATAAGTAAATTTTGCTGCTGAAGATAAATTTTCTATTTTTTTTTTAATTTTTGTTTCAATCGTGTTTGGATGTATATGGACGCATTTTTGTTTGTATACCATGGAACAATA

Coding sequence (CDS)

ATGAAAACCTCACTAACCACCAATACTTCTCTCGACCTTAATTGCAATCCTCCGCCGTACGCCGCCGACGATTCCCCGGCCAGTGACGCAGTTACTCCGCTCGAAGAACAGGCTCCTTCCGTTCTTGACGAGAAATTGAATCGGATCAGTTCGGAGAATCAGAATCTGAATCGGATGCTAGGCGTTGTGTTCGAAAAATACAGTGTTCTGCTAAATCAGGTAACCGATTTGATGATCAATTCGATGAAGCGAAAGGCAGGGTGCGATCATTGCAATTTCTTAGATCGGAGCGGCTCTGGCGCCGATGCGTTCACCGATCGGTATTGCGGCTGCTGTAGCGACGATGATTCGTGTCACAAAAGGCCTAGAGAAAGCAGTAAGACTAAGGTCACGAGAGTTTTGGTTCCGACGCCGATTTCTGATTCAAGCCTGGTTGTTAAGGATGGATATCAATGGAGAAAATACGGTCAAAAGGTCACTAAAGACAATCCGTCGCCTAGAGCTTACTATAAATGCTCCTTTGCCCCAAGCTGCCCGGTGAAGAGGAAGGTGCAAAGAAGTGCTGAAGACACATCCTATTTAGTTGTCACGTACGAAGGAGAGCACAATCACATGAAACCTAATTCTGGTGAGATTGAATATCAATTGGTTGAACGACCAATTCAGTTGAATTCAAAGCTGGATTCGTCTATTTCATCACCCCCGTCGTCGGTCATTTCTCATAATTTCGATTTAGCACAGTACCAAAAATGTTCAGTCCCAAAACTTGAATTAAGACCCTCAGCTTCAACCCACCACATCTTACTTCGGCAAATGGCTTCGGCTTTGACCAGCGACCCCAATTTCACAAGAGCTCTTGTCTCCGCCATTACTGAAAGCATGGTCTGA

Protein sequence

MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRMLGVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDSCHKRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVSAITESMV

Homology

[Close]

BLAST of Sed0006000 vs. NCBI nr
Match: XP_023537686.1 (probable WRKY transcription factor 40 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 2.4e-108
Identity = 220/307 (71.66%), Postives = 245/307 (79.80%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP V+ EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPGVIVEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQV DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQVVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSS+SSP SSVI
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSLSSPSSSVI 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  VP+LE RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSVTTFDLTKSQSIDTLKSLVPELE-RPSTSTQQMVCQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. NCBI nr
Match: XP_023002441.1 (probable WRKY transcription factor 40 [Cucurbita maxima])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 217/307 (70.68%), Postives = 245/307 (79.80%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP+VL EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPAVLAEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQ+ DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQMVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSS+SSP S ++
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSVSSPSSLLM 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  VP+LE RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSVTTFDLTKSQSIDTLKSLVPELE-RPSTSTQQMVFQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. NCBI nr
Match: KAG6585499.1 (putative WRKY transcription factor 40, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398.3 bits (1022), Expect = 5.8e-107
Identity = 217/307 (70.68%), Postives = 243/307 (79.15%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP V+ EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPGVIVEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQV DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQVVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTK NPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKGNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSSISSP SSV+
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSISSPSSSVM 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  +P+ E RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSITTFDLTKSQSIDTLKSPIPEFE-RPSTSTQRMVCQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. NCBI nr
Match: XP_022951183.1 (probable WRKY transcription factor 40 [Cucurbita moschata] >KAG7020415.1 putative WRKY transcription factor 40, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.9 bits (1021), Expect = 7.6e-107
Identity = 216/307 (70.36%), Postives = 243/307 (79.15%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP V+ EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPGVIVEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQV DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQVVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTK NPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKGNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSS+SSP SSV+
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSVSSPSSSVM 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  +P+ E RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSITTFDLTKSQSIDTLKSPIPEFE-RPSTSTQRMVCQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. NCBI nr
Match: XP_023545515.1 (probable WRKY transcription factor 40 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-102
Identity = 212/311 (68.17%), Postives = 236/311 (75.88%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S T NTSLDLN NPPPY  D+SPA+  +TPL+ + P+VL EKLNR+SSENQ LN+ML
Sbjct: 1   MEPSATINTSLDLNFNPPPYTDDESPATSTLTPLKAETPAVLAEKLNRMSSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDSCHK 120
           G V E YS+L NQV  LM  S KRKAGCD CNF +R+GS      D+YCGCCSDDDSC+K
Sbjct: 61  GRVVENYSLLQNQVIRLMFKSRKRKAGCDSCNF-NRNGS------DQYCGCCSDDDSCYK 120

Query: 121 RPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180
           RPRESSK KV RVLV TP+SDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV
Sbjct: 121 RPRESSKPKVMRVLVSTPVSDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180

Query: 181 KRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI- 240
           KRKVQRS ED SYLV TYEGEHNH KPNSG IEYQLV  PIQL S LDSS+SSP SSV+ 
Sbjct: 181 KRKVQRSVEDPSYLVATYEGEHNHPKPNSG-IEYQLV-GPIQLGSNLDSSVSSPSSSVVK 240

Query: 241 --------------SHNFDLAQYQKCSVPKLELRP-SASTHHILLRQMASALTSDPNFTR 296
                         S +       K SVP+LE  P S+ST  IL++QMAS LT DPNFTR
Sbjct: 241 GPSIMPSVVTYDYLSKSPSTTTTVKASVPELETPPASSSTQTILVQQMASLLTRDPNFTR 300

[Close]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot
Match: Q9SAH7 (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42
Identity = 120/306 (39.22%), Postives = 169/306 (55.23%), Query Frame = 0


Query: 3   TSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRMLGV 62
           +S   +TSLDL         ++ P +           S L E+LNR+S+EN+ L+ ML +
Sbjct: 5   SSSLVDTSLDLTIGVTRMRVEEDPPT-----------SALVEELNRVSAENKKLSEMLTL 64

Query: 63  VFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDS----- 122
           + + Y+VL  Q+ + +  S   +          +S +  DAF+    G  S+  S     
Sbjct: 65  MCDNYNVLRKQLMEYVNKSNITERDQISPPKKRKSPAREDAFSCAVIGGVSESSSTDQDE 124

Query: 123 --CHKRPRES-SKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSF 182
             C K+  E+  K KV+RV   T  SD++LVVKDGYQWRKYGQKVT+DNPSPRAY+KC+ 
Sbjct: 125 YLCKKQREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCAC 184

Query: 183 APSCPVKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQL---------VERPIQLNS 242
           APSC VK+KVQRS ED S LV TYEGEHNH  P+  +    L            P+  N 
Sbjct: 185 APSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRHISHGGSASTPVAANR 244

Query: 243 KLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSASTHHILLRQMASALTSDPNFTRA 292
           +  SS++ P ++V     D+ + +K + P   +        +L+ QMAS+LT DPNFT A
Sbjct: 245 R--SSLTVPVTTV-----DMIESKKVTSPTSRI-DFPQVQKLLVEQMASSLTKDPNFTAA 291

[Close]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot
Match: Q9C5T4 (WRKY transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 6.4e-40
Identity = 131/328 (39.94%), Postives = 167/328 (50.91%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASD-AVTPL------EEQAPSVLDEKLNRISSEN 60
           M  S   + SLDLN NP          S  A T L      ++++ S L E+LNR++SEN
Sbjct: 1   MDGSSFLDISLDLNTNPFSAKLPKKEVSVLASTHLKRKWLEQDESASELREELNRVNSEN 60

Query: 61  QNLNRMLGVVFEKYSVLLNQV-------------TDLMINSMKRKAGCDHCNFLDRSGSG 120
           + L  ML  V E Y+ L N +             TD+ I   K+    D   FL   G  
Sbjct: 61  KKLTEMLARVCESYNELHNHLEKLQSRQSPEIEQTDIPIKKRKQ----DPDEFL---GFP 120

Query: 121 ADAFTDRYCGCCSDDDSCH--------------KRPRESS--KTKVTRVLVPTPISDSSL 180
               + +     S++D  H              KRP   S  K KV+ V VPT  SD+SL
Sbjct: 121 IGLSSGKTENSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSL 180

Query: 181 VVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNH 240
            VKDG+QWRKYGQKVT+DNPSPRAY++CSFAPSCPVK+KVQRSAED S LV TYEG HNH
Sbjct: 181 TVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH 240

Query: 241 MKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSAST 292
           + PN+ E                  + S   SS ++    L     C    LE     +T
Sbjct: 241 LGPNASE----------------GDATSQGGSSTVT----LDLVNGCHRLALEKNERDNT 300

[Close]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot
Match: Q0DAJ3 (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY28 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-37
Identity = 118/329 (35.87%), Postives = 151/329 (45.90%), Query Frame = 0


Query: 7   TNTSLDLNCNPPPYAADDS-PASDAVTPLEEQAPS--------VLDEKLNRISSENQNLN 66
           T+ SLDLN   P  A   S PA+     +EE   S         L+ +L R S EN+ L 
Sbjct: 67  TSLSLDLNVGLPSTARRSSAPAAPIKVLVEENFLSFKKDHEVEALEAELRRASEENKKLT 126

Query: 67  RMLGVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDS 126
            ML  V  KY+ L  QV D+M  +        +       G        R     S DD+
Sbjct: 127 EMLRAVVAKYTELQGQVNDMMSAAAAAAVNAGNHQSSTSEGGSVSPSRKRIRSVDSLDDA 186

Query: 127 CHKRP-----------------------------------RESSKTKVTRVLVPTPISDS 186
            H R                                    RE  K KV++  V    SD 
Sbjct: 187 AHHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDL 246

Query: 187 SLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEH 246
           SLVVKDGYQWRKYGQKVTKDNP PRAY++CSFAP+CPVK+KVQRSA+D + LV TYEGEH
Sbjct: 247 SLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEH 306

Query: 247 NHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSA 292
           NH +P   +   +         +   S    PPS+  +      +    + P  E+    
Sbjct: 307 NHAQPPHHDAGSKTAA------AAKHSQHQPPPSAAAAVVRQQQEQAAAAGPSTEV---- 366

[Close]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot
Match: B8B0R8 (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY28 PE=3 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-37
Identity = 118/329 (35.87%), Postives = 150/329 (45.59%), Query Frame = 0


Query: 7   TNTSLDLNCNPPPYAADDS-PASDAVTPLEEQAPS--------VLDEKLNRISSENQNLN 66
           T+ SLDLN   P  A   S PA+     +EE   S         L+ +L R S EN+ L 
Sbjct: 67  TSLSLDLNVGLPSTARRSSAPAAPIKVLVEENFLSFKKDHEVEALEAELRRASEENKKLT 126

Query: 67  RMLGVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDS 126
            ML  V  KY  L  QV D+M  +        +       G        R     S DD+
Sbjct: 127 EMLRAVVAKYPELQGQVNDMMSAAAAAAVNAGNHQSSTSEGGSVSPSRKRIRSVDSLDDA 186

Query: 127 CHKRP-----------------------------------RESSKTKVTRVLVPTPISDS 186
            H R                                    RE  K KV++  V    SD 
Sbjct: 187 AHHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDL 246

Query: 187 SLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEH 246
           SLVVKDGYQWRKYGQKVTKDNP PRAY++CSFAP+CPVK+KVQRSA+D + LV TYEGEH
Sbjct: 247 SLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEH 306

Query: 247 NHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSA 292
           NH +P   +   +         +   S    PPS+  +      +    + P  E+    
Sbjct: 307 NHAQPPHHDAGSKTAA------AAKHSQHQPPPSAAAAVVRQQQEQAAAAGPSTEV---- 366

[Close]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot
Match: Q9SK33 (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana OX=3702 GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 96/265 (36.23%), Postives = 135/265 (50.94%), Query Frame = 0


Query: 34  LEEQAPSVLDEKLNRISSENQNLNRMLGVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNF 93
           ++++  ++L +++NR++SEN+ L  ML  V EKY  L N + +L            +   
Sbjct: 37  VKDEKRNMLQDEINRVNSENKKLTEMLARVCEKYYALNNLMEELQSRKSPESVNFQNKQL 96

Query: 94  LDRSGSGADAFTDRYCGCCSDDDSCHKRPRE---SSKTKVTRVLVPTPISDSSLVVKDGY 153
             +     D F     G           P E   + K  V+        SD+SL VKDGY
Sbjct: 97  TGKRKQELDEFVSSPIGLSLG-------PIENITNDKATVSTAYFAAEKSDTSLTVKDGY 156

Query: 154 QWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNHMKPNSG 213
           QWRKYGQK+T+DNPSPRAY++CSF+PSC VK+KVQRSAED S+LV TYEG HNH  P++ 
Sbjct: 157 QWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGPHAS 216

Query: 214 EIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSASTHHILLR 273
                                       +S    L   Q    P  E +   +   +L++
Sbjct: 217 ----------------------------VSRTVKLDLVQGGLEPVEEKKERGTIQEVLVQ 266

Query: 274 QMASALTSDPNFTRALVSAITESMV 296
           QMAS+LT DP FT AL +AI+  ++
Sbjct: 277 QMASSLTKDPKFTAALATAISGRLI 266

[Close]

BLAST of Sed0006000 vs. ExPASy TrEMBL
Match: A0A6J1KLB2 (probable WRKY transcription factor 40 OS=Cucurbita maxima OX=3661 GN=LOC111496280 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.3e-107
Identity = 217/307 (70.68%), Postives = 245/307 (79.80%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP+VL EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPAVLAEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQ+ DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQMVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSS+SSP S ++
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSVSSPSSLLM 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  VP+LE RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSVTTFDLTKSQSIDTLKSLVPELE-RPSTSTQQMVFQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. ExPASy TrEMBL
Match: A0A6J1GGZ9 (probable WRKY transcription factor 40 OS=Cucurbita moschata OX=3662 GN=LOC111454104 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.7e-107
Identity = 216/307 (70.36%), Postives = 243/307 (79.15%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S   NTSL LN NPPPY  D SPA+ +VTP +E+AP V+ EKLNRISSENQ LN+ML
Sbjct: 1   MEPSPAINTSLGLNFNPPPYTDDGSPANISVTPTKEEAPGVIVEKLNRISSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSG-SGADAFTDRYCGCCSDDDSCH 120
           GVV E YSVL NQV DLMI S KRKAGCD+CNF +RSG SGADA TD+YC C SDDDSCH
Sbjct: 61  GVVVENYSVLRNQVVDLMIKSRKRKAGCDNCNFFNRSGSSGADALTDQYCCCGSDDDSCH 120

Query: 121 KRPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCP 180
           KRPRESS+ K+ RVLV TPISDSSL VKDGYQWRKYGQKVTK NPSPRAYYKCSFAPSCP
Sbjct: 121 KRPRESSRPKIKRVLVQTPISDSSLAVKDGYQWRKYGQKVTKGNPSPRAYYKCSFAPSCP 180

Query: 181 VKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI 240
           VK+KVQRS +D+SYLV TYEGEHNH KPNSG IEYQLV  PI L SKLDSS+SSP SSV+
Sbjct: 181 VKKKVQRSVQDSSYLVATYEGEHNHKKPNSG-IEYQLV-GPIHLGSKLDSSVSSPSSSVM 240

Query: 241 SHN------FDLAQYQ-----KCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVS 296
           S +      FDL + Q     K  +P+ E RPS ST  ++ +QMAS LT DPNFT+ALV+
Sbjct: 241 SPSLPSITTFDLTKSQSIDTLKSPIPEFE-RPSTSTQRMVCQQMASLLTRDPNFTKALVT 300

[Close]

BLAST of Sed0006000 vs. ExPASy TrEMBL
Match: A0A6J1HD49 (probable WRKY transcription factor 40 OS=Cucurbita moschata OX=3662 GN=LOC111462413 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.0e-101
Identity = 212/311 (68.17%), Postives = 235/311 (75.56%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S T NTSLDLN NPPPY  D+SPA+  +TPL+ + P+VL EKLNR+SSENQ LN+ML
Sbjct: 1   MEPSATINTSLDLNFNPPPYTDDESPATSNLTPLKSETPAVLAEKLNRMSSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDSCHK 120
           G V E YS+L NQV  LM  S KRKAG D CNF +RSGS      D+YCGCCSDDDSC+K
Sbjct: 61  GRVVENYSLLQNQVIRLMFKSRKRKAGGDSCNF-NRSGS------DQYCGCCSDDDSCYK 120

Query: 121 RPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180
           RPRESSK KV RVLV TP+SDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV
Sbjct: 121 RPRESSKPKVMRVLVSTPVSDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180

Query: 181 KRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI- 240
           KRKVQRS ED SYLV TYEGEHNH KPNSG IEYQLV  PIQL S LDSS+SSP SSV+ 
Sbjct: 181 KRKVQRSVEDPSYLVATYEGEHNHPKPNSG-IEYQLV-GPIQLGSNLDSSVSSPSSSVVK 240

Query: 241 --------------SHNFDLAQYQKCSVPKLELRP-SASTHHILLRQMASALTSDPNFTR 296
                         S +       K SVP+LE  P S+ST  IL++QMAS LT DPNFTR
Sbjct: 241 GPSIMPSVVTYDYLSKSPSTTNTVKASVPELETPPASSSTQTILVQQMASLLTRDPNFTR 300

[Close]

BLAST of Sed0006000 vs. ExPASy TrEMBL
Match: A0A6J1K8R9 (probable WRKY transcription factor 40 OS=Cucurbita maxima OX=3661 GN=LOC111491698 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 4.0e-101
Identity = 210/311 (67.52%), Postives = 233/311 (74.92%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRML 60
           M+ S T NTSLDLN NPPPY  D+SPA+  +TPL+ + P+VL E LNR+SSENQ LN+ML
Sbjct: 1   MEPSATINTSLDLNFNPPPYTDDESPATSTLTPLKAETPAVLSEMLNRMSSENQKLNQML 60

Query: 61  GVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDSCHK 120
           G V E YS+L NQV  LM  S KRK GCD CNF +RSGS      D+YC CCSDDDSC+K
Sbjct: 61  GRVVENYSLLQNQVIRLMFKSRKRKTGCDGCNF-NRSGS------DQYCSCCSDDDSCYK 120

Query: 121 RPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180
           RPRESSK KV RVLV TP+SDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV
Sbjct: 121 RPRESSKPKVMRVLVLTPVSDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 180

Query: 181 KRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVI- 240
           KRKVQRS ED SYLV TYEGEHNH KPNSG IEYQLV  PIQL S LDSS+SSP SSV+ 
Sbjct: 181 KRKVQRSVEDPSYLVATYEGEHNHPKPNSG-IEYQLV-GPIQLGSNLDSSVSSPSSSVVK 240

Query: 241 --------------SHNFDLAQYQKCSVPKLELRP-SASTHHILLRQMASALTSDPNFTR 296
                         S +       K SVP+LE  P S+ST  IL++QMAS LT DPNFTR
Sbjct: 241 GPSIMPSVVTYDYLSKSPSTTNTVKASVPELETPPASSSTQTILVQQMASFLTRDPNFTR 300

[Close]

BLAST of Sed0006000 vs. ExPASy TrEMBL
Match: A0A6J1BQA8 (probable WRKY transcription factor 40 OS=Momordica charantia OX=3673 GN=LOC111004661 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.3e-96
Identity = 202/296 (68.24%), Postives = 234/296 (79.05%), Query Frame = 0


Query: 4   SLTTNTSLDLNCNPPPYAADDSPASDAV--TPLEEQAPSVLDEKLNRISSENQNLNRMLG 63
           S T NTSLDLN NPPP  ADDSPA+  +  +  E+QA  VL EKLNRISSEN  LN+++G
Sbjct: 6   SATINTSLDLNFNPPPPTADDSPANHTIYSSLKEDQAAGVLVEKLNRISSENAKLNQIIG 65

Query: 64  VVFEKYSVLLNQVTDLMINS-MKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDSCHK 123
           +V E YSVL NQV+DLMI S  KRKAGCD+CN  +RSG+ ++ FTD+YCGCCSDDDSC+K
Sbjct: 66  LVVENYSVLRNQVSDLMIKSRSKRKAGCDNCN-SNRSGNNSNVFTDQYCGCCSDDDSCYK 125

Query: 124 RPRESSKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 183
           RPRE+SK KV RVLVPTP+SDS+LVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV
Sbjct: 126 RPRENSKPKVKRVLVPTPLSDSTLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPV 185

Query: 184 KRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNS-KLDSSISSPPSSVI 243
           K+KVQRSA+D S+LV TYEGEHNHM+PNSG IEYQLV  PIQL S KL+SS+ SPP S+ 
Sbjct: 186 KKKVQRSAQDPSFLVATYEGEHNHMQPNSG-IEYQLV-GPIQLGSNKLESSVLSPP-SMR 245

Query: 244 SHNFDLAQYQKCSVPKLELRPSASTHHILLRQMASALTSDPNFTRALVSAITESMV 296
           S +       K S+P        ST  IL++QMAS LT DPNFT AL +AIT +MV
Sbjct: 246 SPSSSSVDTLKASLP--------STPQILVQQMASFLTRDPNFTTALATAITGTMV 289

[Close]

BLAST of Sed0006000 vs. TAIR 10
Match: AT1G80840.1 (WRKY DNA-binding protein 40 )

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-43
Identity = 120/306 (39.22%), Postives = 169/306 (55.23%), Query Frame = 0


Query: 3   TSLTTNTSLDLNCNPPPYAADDSPASDAVTPLEEQAPSVLDEKLNRISSENQNLNRMLGV 62
           +S   +TSLDL         ++ P +           S L E+LNR+S+EN+ L+ ML +
Sbjct: 5   SSSLVDTSLDLTIGVTRMRVEEDPPT-----------SALVEELNRVSAENKKLSEMLTL 64

Query: 63  VFEKYSVLLNQVTDLMINSMKRKAGCDHCNFLDRSGSGADAFTDRYCGCCSDDDS----- 122
           + + Y+VL  Q+ + +  S   +          +S +  DAF+    G  S+  S     
Sbjct: 65  MCDNYNVLRKQLMEYVNKSNITERDQISPPKKRKSPAREDAFSCAVIGGVSESSSTDQDE 124

Query: 123 --CHKRPRES-SKTKVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSF 182
             C K+  E+  K KV+RV   T  SD++LVVKDGYQWRKYGQKVT+DNPSPRAY+KC+ 
Sbjct: 125 YLCKKQREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCAC 184

Query: 183 APSCPVKRKVQRSAEDTSYLVVTYEGEHNHMKPNSGEIEYQL---------VERPIQLNS 242
           APSC VK+KVQRS ED S LV TYEGEHNH  P+  +    L            P+  N 
Sbjct: 185 APSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRHISHGGSASTPVAANR 244

Query: 243 KLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSASTHHILLRQMASALTSDPNFTRA 292
           +  SS++ P ++V     D+ + +K + P   +        +L+ QMAS+LT DPNFT A
Sbjct: 245 R--SSLTVPVTTV-----DMIESKKVTSPTSRI-DFPQVQKLLVEQMASSLTKDPNFTAA 291

[Close]

BLAST of Sed0006000 vs. TAIR 10
Match: AT4G31800.2 (WRKY DNA-binding protein 18 )

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-41
Identity = 130/327 (39.76%), Postives = 167/327 (51.07%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASDAVTPL------EEQAPSVLDEKLNRISSENQ 60
           M  S   + SLDLN NP         +  A T L      ++++ S L E+LNR++SEN+
Sbjct: 1   MDGSSFLDISLDLNTNPFSAKLPKEVSVLASTHLKRKWLEQDESASELREELNRVNSENK 60

Query: 61  NLNRMLGVVFEKYSVLLNQV-------------TDLMINSMKRKAGCDHCNFLDRSGSGA 120
            L  ML  V E Y+ L N +             TD+ I   K+    D   FL   G   
Sbjct: 61  KLTEMLARVCESYNELHNHLEKLQSRQSPEIEQTDIPIKKRKQ----DPDEFL---GFPI 120

Query: 121 DAFTDRYCGCCSDDDSCH--------------KRPRESS--KTKVTRVLVPTPISDSSLV 180
              + +     S++D  H              KRP   S  K KV+ V VPT  SD+SL 
Sbjct: 121 GLSSGKTENSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLT 180

Query: 181 VKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNHM 240
           VKDG+QWRKYGQKVT+DNPSPRAY++CSFAPSCPVK+KVQRSAED S LV TYEG HNH+
Sbjct: 181 VKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNHL 240

Query: 241 KPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSAST- 292
            PN+ E                  + S   SS ++    L     C    LE     +T 
Sbjct: 241 GPNASE----------------GDATSQGGSSTVT----LDLVNGCHRLALEKNERDNTM 300

[Close]

BLAST of Sed0006000 vs. TAIR 10
Match: AT4G31800.1 (WRKY DNA-binding protein 18 )

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-41
Identity = 131/328 (39.94%), Postives = 167/328 (50.91%), Query Frame = 0


Query: 1   MKTSLTTNTSLDLNCNPPPYAADDSPASD-AVTPL------EEQAPSVLDEKLNRISSEN 60
           M  S   + SLDLN NP          S  A T L      ++++ S L E+LNR++SEN
Sbjct: 1   MDGSSFLDISLDLNTNPFSAKLPKKEVSVLASTHLKRKWLEQDESASELREELNRVNSEN 60

Query: 61  QNLNRMLGVVFEKYSVLLNQV-------------TDLMINSMKRKAGCDHCNFLDRSGSG 120
           + L  ML  V E Y+ L N +             TD+ I   K+    D   FL   G  
Sbjct: 61  KKLTEMLARVCESYNELHNHLEKLQSRQSPEIEQTDIPIKKRKQ----DPDEFL---GFP 120

Query: 121 ADAFTDRYCGCCSDDDSCH--------------KRPRESS--KTKVTRVLVPTPISDSSL 180
               + +     S++D  H              KRP   S  K KV+ V VPT  SD+SL
Sbjct: 121 IGLSSGKTENSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSL 180

Query: 181 VVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNH 240
            VKDG+QWRKYGQKVT+DNPSPRAY++CSFAPSCPVK+KVQRSAED S LV TYEG HNH
Sbjct: 181 TVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH 240

Query: 241 MKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSAST 292
           + PN+ E                  + S   SS ++    L     C    LE     +T
Sbjct: 241 LGPNASE----------------GDATSQGGSSTVT----LDLVNGCHRLALEKNERDNT 300

[Close]

BLAST of Sed0006000 vs. TAIR 10
Match: AT2G25000.1 (WRKY DNA-binding protein 60 )

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-38
Identity = 96/265 (36.23%), Postives = 135/265 (50.94%), Query Frame = 0


Query: 34  LEEQAPSVLDEKLNRISSENQNLNRMLGVVFEKYSVLLNQVTDLMINSMKRKAGCDHCNF 93
           ++++  ++L +++NR++SEN+ L  ML  V EKY  L N + +L            +   
Sbjct: 37  VKDEKRNMLQDEINRVNSENKKLTEMLARVCEKYYALNNLMEELQSRKSPESVNFQNKQL 96

Query: 94  LDRSGSGADAFTDRYCGCCSDDDSCHKRPRE---SSKTKVTRVLVPTPISDSSLVVKDGY 153
             +     D F     G           P E   + K  V+        SD+SL VKDGY
Sbjct: 97  TGKRKQELDEFVSSPIGLSLG-------PIENITNDKATVSTAYFAAEKSDTSLTVKDGY 156

Query: 154 QWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSAEDTSYLVVTYEGEHNHMKPNSG 213
           QWRKYGQK+T+DNPSPRAY++CSF+PSC VK+KVQRSAED S+LV TYEG HNH  P++ 
Sbjct: 157 QWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGPHAS 216

Query: 214 EIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQYQKCSVPKLELRPSASTHHILLR 273
                                       +S    L   Q    P  E +   +   +L++
Sbjct: 217 ----------------------------VSRTVKLDLVQGGLEPVEEKKERGTIQEVLVQ 266

Query: 274 QMASALTSDPNFTRALVSAITESMV 296
           QMAS+LT DP FT AL +AI+  ++
Sbjct: 277 QMASSLTKDPKFTAALATAISGRLI 266

[Close]

BLAST of Sed0006000 vs. TAIR 10
Match: AT1G18860.1 (WRKY DNA-binding protein 61 )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 61/160 (38.12%), Postives = 82/160 (51.25%), Query Frame = 0


Query: 129 KVTRVLVPTPISDSSLVVKDGYQWRKYGQKVTKDNPSPRAYYKCSFAPSCPVKRKVQRSA 188
           K TRV V +     ++   DG QWRKYGQK+ K NP PRAYY+C+ A SCPV+++VQR +
Sbjct: 175 KKTRVSVRSRCETPTM--NDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCS 234

Query: 189 EDTSYLVVTYEGEHNHMKPNSGEIEYQLVERPIQLNSKLDSSISSPPSSVISHNFDLAQY 248
           ED S L+ TYEG HNH  P S             +     SS SS  + +   NF L+  
Sbjct: 235 EDMSILISTYEGTHNHPLPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGN 294

Query: 249 QKCSVPKLEL--RPSASTHHILLRQMASALTSDPNFTRAL 287
                PK      PS+S H  +   + ++ +S   F   L
Sbjct: 295 NITPKPKTHFLQSPSSSGHPTVTLDLTTSSSSQQPFLSML 332

The following BLAST results are available for this feature:

BLAST of Sed0006000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537686.1	2.4e-108	71.66	probable WRKY transcription factor 40 [Cucurbita pepo subsp. pepo]	[more]
XP_023002441.1	2.6e-107	70.68	probable WRKY transcription factor 40 [Cucurbita maxima]	[more]
KAG6585499.1	5.8e-107	70.68	putative WRKY transcription factor 40, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022951183.1	7.6e-107	70.36	probable WRKY transcription factor 40 [Cucurbita moschata] >KAG7020415.1 putativ...	[more]
XP_023545515.1	1.9e-102	68.17	probable WRKY transcription factor 40 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0006000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAH7	1.8e-42	39.22	Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 ...	[more]
Q9C5T4	6.4e-40	39.94	WRKY transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=WRKY18 PE=1 SV=2	[more]
Q0DAJ3	1.7e-37	35.87	WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRK...	[more]
B8B0R8	3.0e-37	35.87	WRKY transcription factor WRKY28 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY2...	[more]
Q9SK33	3.9e-37	36.23	Probable WRKY transcription factor 60 OS=Arabidopsis thaliana OX=3702 GN=WRKY60 ...	[more]

BLAST of Sed0006000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLB2	1.3e-107	70.68	probable WRKY transcription factor 40 OS=Cucurbita maxima OX=3661 GN=LOC11149628...	[more]
A0A6J1GGZ9	3.7e-107	70.36	probable WRKY transcription factor 40 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A6J1HD49	1.0e-101	68.17	probable WRKY transcription factor 40 OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A6J1K8R9	4.0e-101	67.52	probable WRKY transcription factor 40 OS=Cucurbita maxima OX=3661 GN=LOC11149169...	[more]
A0A6J1BQA8	1.3e-96	68.24	probable WRKY transcription factor 40 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Sed0006000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80840.1	1.3e-43	39.22	WRKY DNA-binding protein 40	[more]
AT4G31800.2	1.2e-41	39.76	WRKY DNA-binding protein 18	[more]
AT4G31800.1	4.5e-41	39.94	WRKY DNA-binding protein 18	[more]
AT2G25000.1	2.8e-38	36.23	WRKY DNA-binding protein 60	[more]
AT1G18860.1	1.4e-21	38.13	WRKY DNA-binding protein 61	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 146..206 e-value: 8.0E-34 score: 128.4
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 147..204 e-value: 6.3E-24 score: 84.0
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 141..207 score: 27.163624
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 132..208 e-value: 2.1E-29 score: 103.1
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 143..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31429:SF3	WRKY TRANSCRIPTION FACTOR 40-RELATED	coord: 2..294
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31429	WRKY TRANSCRIPTION FACTOR 36-RELATED	coord: 2..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006000.1	Sed0006000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding