Sed0005979 (gene) Chayote v1

Overview


Name	Sed0005979
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein ALP1-like protein
Location	LG11: 19890600 .. 19893995 (-)
RNA-Seq Expression	Sed0005979
Synteny	Sed0005979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAAATGTTACTTGGAGAAAGATATTTTTGGACATACCCGATGCAAGGAAGAGAGATTTGATTTATAGTCTTTAGATCTTACTATGAGATTTTGTAGCCATCTCATTCATAGGAAGAATTTTTTTTTAGAATGATATCTTTTGTATTTTTTATATAACTTACTTTCTCACGTACTAAACTTATGCATTTTGCTATGTGGTTTCATTATATAATGTCATGTTGTCCATGTTTTATTCAAGGATATCTCTATGGATTTAATTGAAGAGAATGACTTGGATTATGATTCTGACGGCGATGATGATGTTGTGTACATCTTTTTTGGTTTAATAAATGGTTTTCACAAGATGCACTCTTCAAGACAACTATGTAGAACGTCTTTACTCAAAGGTCATGATTATGTGATTGAGTTATTAAATGGGAATGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGTTACATTCGTAGCTTTTTGTGAGGATTTAAAGGCGAAGACGAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTTGTAACAGCCCAGGTTTTCATCCCGGTCTTCCAGGTATGCCCTAGGGGTATTTTGGTAATTTGGTCGGGCCGTCAGAGCCGTTTATGTCTTTTCCAGTTGTTAAAAATTATTGGATGGTCTTTTGTAGGTTTTTGAGGCTTTGTGGATGTGTTTGGGCATGGAGAGATGCAAAAGTAAAATAGAGAATTAATTGTGTACAGCTGGGATTCGAGCCCGAGTCTTCTGGAAGCCTGTTGGGATGCATGCCAGTTGAGCTATTGGGAGCTCTTGTTACTCTTTCCGCGACATATCTTGATTAGCCTTGGATCCTTAGAGTTTTGGTGCTTTTGATTAAAAGAAGAGAAAATAGGGCTTTAGGTATTCTTCTCCAAAAGCCCCTTGGCCGCCCAAGCATTTCTCCCTAGCTCCCAAGCCGAGTCCCTTCTCCTTAGTAGCCCCGAGGTCCGATCGTCGTTCTGGTAAGGTTCTTCGTCTTCTTCTTCTTCTTCTTCTTTGATTGACACTCTTGCTGGCCGAAGTGAAAAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGTTGCAGCTAGCCGAGAGAAGCCCAGCAGCCAGCAGCCAGATCGAGCCCAGCTCCATCGTCCCCCTGTCGCACGCACCAGCAGGCATCAGATCGCCCAGCAGCAGGCCCGTCGCCCGGTCGCACGCCCAGATTGCCTAGCGGACTGCCGCAGCCGTCGCCGCGACGCCAGATCGCCGCCGCGCGTTATGTCACTCGCTCGCTGCGCGTCGGATCTCGTTGCTCGCCCAGCGCACCACCTGTTCTCTCGCTCGCGACGCGCGCTGAGCGCCGTGCAAGACTTCCACCCGCCCCACCAGCACACCTGGCGTGCGATCCTGCCGCCCATCAGCGCCCAACAACAGCCTCACCCATGCAGCCTGTCCGTCCGCGCGTCAGCCGTGCCGCGTGAGTTGCTCCCGAGCCGAGTCCTGTTTATTTTATTATATTTAGGCCTATGGATTGTGATTATTATTGTGTTTGTTAGGCTCTTGTTAGCTAGCTCGGGAGTGATCGCAGCTTAGGATTCTTGTGTGTAGTTGCCTCCCGACCAAGGTAAGGATTTCTTACCGGAGTTGTGTGGGCCCTGCGATATTATATGTGATTGCTGTTTGTATGCTTGTTGTGTGTATCAGCATGTTTAGTGATAGGTGCTCTGTTCTGAATTTCTGACTGGCATGATTTCTTATGTTGTTTCTCATGTTAGTCCATGCTAGGTTGTTCCGTTCTGGCATGGTCATTATCTGTTCTTGCTTCGTAGTATCATGCTAGGTTCGTTGTATTTGTTGAGCACGTATTAGATTGTTTGTTGTATCTGTTTATAGGTTTGAGATATGGTAGGTAGCATCATCCGGGCCAGGATGCATAACGTAACTTGCATCCATGGCAGGGACGTACGAGACAATACTCCGTCCCTGATCCCCCGTTAGGGTTTAGCTAACCTTAACGGCAGGCCCTGCAATCTTGGGTGAGGGTGGCAGACTGTTAAATGCCCCAACGGTCGGGATGATGACATGGCATTGCCTTGTCCCCGGCAGTCGGCACGTCCTCAGCGTGTTCGGCCGTAGCCTTTGATTGCCACCTGTTAGGGTAAGGACGACTTCCTGGTGTAAGCCTACCACGACCGGTTCCTTAGCCTCAAAAAGCGGTGGTTCAGCCGACATAGTTCACGTGTCCAGGTCTCACACCCCTATGTCAGTGACACCGATCCAGAGATTTAGTTAGGCATGGTGACTGGACCTGGGCAACTTGCCACTAGACCCGGCACCCCCCATGGTTTACAGTAGCATGCGGTGCGCGCATACGCTCATTACAGCGCCGACCGGAGAGCTCCTCGGGATCTTGAGCCAGTGCACCTTTCGTGATCGATGATGATGCCGAGGCCGAGACTTGTTTCTCGTATAGGATCGTATCATGAGGTGGATTATTCTGGAGTAAGACCCTGAGTTGGCATCCAAAGATTATGTGTGGATTTAAGCTATGTGCTCTCTTCTGTGTTTATATTCATAGCTTGCATACCTTTCTGCTAGATGACCATGTATATCGTATTGTACCCCGGTTGGGGATTCTTTCTAAGTAATTCGTTACTCACCCTTATTTTTGTGGTTTTCCACAGGTAACCAAGGTGCGAGACTGGATGGCTGAAGGAGGAGCTATGATCATGGAAAACAGCTGTCGAACTCTGAATTTTATCTATGATTCTTTATGTATTATTTTTCCTCTGAATGCATGTAGTTGGGCACAGAGCCCTAGGTTGTTTTCTGAATGCTTTTCCGGATTCTAGCACTATTGTAACTTTTGGATGTTTTGAATGTTTTAAATAAATCTCTGATCAGAGTAAGTTTTGAAAATGTATTTTTCTTGGAACAGGTGCTTGGAAACAGGGACAGGTTTCAGGAATCTATGTTGACTTTTAAATGGATGTTATGTGTTTTAGTTTTTACTTAGAATCTGAAACACCATTCTTGCATATTGACTTTTGTTTTGAATGCATGCATTGAGGTAAAGACCTATTTTAGGACCCCATTCGGGTCGGGTCTTTACAAAGTTGCCATTTTTTTTATTAGTCATATCACATAATGAGAGAAATCGTATAGTAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAGAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCAAATGGAGATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTTAAAGTAATATCTTAA

mRNA sequence

ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAAATGTTACTTGGAGAAAGATATTTTTGGACATACCCGATGCAAGGAAGAGAGATTTGATTTATAGTCATGATTATGTGATTGAGTTATTAAATGGGAATGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGTTACATTCGTAGCTTTTTGTGAGGATTTAAAGGCGAAGACGAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTTGTAACAGCCCAGGTTTTCATCCCGGACCCCATTCGGGTCGGGTCTTTACAAAGTTGCCATTTTTTTTATTAGTCATATCACATAATGAGAGAAATCGTATAGTAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAGAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCAAATGGAGATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTTAAAGTAATATCTTAA

Coding sequence (CDS)

ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAAATGTTACTTGGAGAAAGATATTTTTGGACATACCCGATGCAAGGAAGAGAGATTTGATTTATAGTCATGATTATGTGATTGAGTTATTAAATGGGAATGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGTTACATTCGTAGCTTTTTGTGAGGATTTAAAGGCGAAGACGAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTTGTAACAGCCCAGGTTTTCATCCCGGACCCCATTCGGGTCGGGTCTTTACAAAGTTGCCATTTTTTTTATTAGTCATATCACATAATGAGAGAAATCGTATAGTAGCTGAAAGGTTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAGAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCAAATGGAGATAATATACCACAAGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTTAAAGTAATATCTTAA

Protein sequence

MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDNIPQEIRSKSKYFPFFKVIS

Homology

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BLAST of Sed0005979 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis])

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-43
Identity = 97/208 (46.63%), Postives = 124/208 (59.62%), Query Frame = 0


Query: 1   MDELDGETYAKVLKLLHGNVTW------RKIFLDIPDAR--------------------- 60
           MDE+DG++Y+K +KLLH +V          +F D  D                       
Sbjct: 509 MDEIDGDSYSKAIKLLHDDVYMDLGDVDLSLFEDDDDDELIFIFLYLVCNEYAQIDSLRQ 568

Query: 61  --KRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKV 120
             +  L+  HDYV+ELLNG+++RC+DCFRM K  F+ FCE+LK+KTNLK SR+++VQE+V
Sbjct: 569 PCRTSLLRGHDYVLELLNGHESRCYDCFRMDKSVFITFCEELKSKTNLKNSRFVTVQEQV 628

Query: 121 CNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKL 180
                                FLL I HNERNR+VAERFQHSG+TISR FN VLK+VC L
Sbjct: 629 A-------------------IFLLTICHNERNRLVAERFQHSGETISRYFNHVLKKVCML 688

[Close]

BLAST of Sed0005979 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 97/228 (42.54%), Postives = 124/228 (54.39%), Query Frame = 0


Query: 1   MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR--------------------------- 60
           MD+LD ++Y KVL+ LHG+V WR++F+D+P+ R                           
Sbjct: 222 MDDLDEDSYNKVLEKLHGDVLWRQMFMDMPERRRIAWIKKFNFCNMDPISDSDDDSEDEE 281

Query: 61  ----------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCE 120
                                 +  ++  HDYV+E+LNG++ RC   FRMK   F+AFCE
Sbjct: 282 VVVLLSLALYEYYDMYIDHRPCRTSMLRGHDYVLEVLNGHEDRCHQNFRMKPQVFIAFCE 341

Query: 121 DLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQ 180
            LK   NLK SRYL++QE+VC                    FLL I HNERNR+V ERFQ
Sbjct: 342 ALKLHANLKHSRYLTLQEQVC-------------------IFLLTIGHNERNRVVQERFQ 401

[Close]

BLAST of Sed0005979 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-41
Identity = 96/229 (41.92%), Postives = 124/229 (54.15%), Query Frame = 0


Query: 1   MDELDGETYAKVLKLLHGNVTWRKIFLDIPDAR--------------------------- 60
           MD+LD ++Y KVL+ LHG++ WR++F+D+P+ R                           
Sbjct: 574 MDDLDEDSYNKVLEKLHGDILWRQMFMDMPEKRRIAWIKKFNFCNMDPICDHSDDDSEDE 633

Query: 61  -----------------------KRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFC 120
                                  +  ++  HDYV+E+LNG++ RC   FRMK   F+AFC
Sbjct: 634 EVVVLLSLALYEYYNMYIDHRPCRTSILRGHDYVVEVLNGHEDRCHQNFRMKPQVFIAFC 693

Query: 121 EDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERF 180
           E LK   NLK SRYL++QE+VC                    FLL I HNERNR+V ERF
Sbjct: 694 EALKLHANLKHSRYLTLQEQVC-------------------IFLLTIGHNERNRVVQERF 753

[Close]

BLAST of Sed0005979 vs. NCBI nr
Match: XP_028094390.1 (uncharacterized protein LOC114294454 [Camellia sinensis])

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-31
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 30  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQE 89
           P   +  ++  HDYV+E+LNG++ R  + FRM+   F+  CE LK    L+ SRYL+VQE
Sbjct: 38  PRPCRTSILQGHDYVLEILNGHERRSKENFRMEPDVFINLCESLKVYGKLEHSRYLTVQE 97

Query: 90  KVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVC 149
           +VC                    FLL I HNERNR+V ERFQHSGQTIS+ FN VLK VC
Sbjct: 98  QVC-------------------IFLLTIGHNERNRVVQERFQHSGQTISKYFNRVLKAVC 157

Query: 150 KLGVEIICPPNGDNIPQEIRSKSKYFPFFK 180
           +LG ++I PP+ D +P EIR   +++PFFK
Sbjct: 158 RLGKQVIRPPDFDEVPAEIRHNPRFYPFFK 168

[Close]

BLAST of Sed0005979 vs. NCBI nr
Match: XP_028100667.1 (uncharacterized protein LOC114300013 [Camellia sinensis] >XP_028120812.1 uncharacterized protein LOC114318158 [Camellia sinensis])

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-31
Identity = 71/150 (47.33%), Postives = 94/150 (62.67%), Query Frame = 0


Query: 30  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQE 89
           P   +  ++  HDYV+E+LNG++ R  + FRM+   F+  CE LK    L+ SRYL+VQE
Sbjct: 38  PRPCRTSILQGHDYVLEILNGHERRSKENFRMEPDVFINLCEALKVYGKLEHSRYLTVQE 97

Query: 90  KVCNSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVC 149
           +VC                    FLL I HNERNR+V ERFQHSGQTIS+ FN VLK VC
Sbjct: 98  QVC-------------------IFLLTIGHNERNRVVQERFQHSGQTISKYFNRVLKAVC 157

Query: 150 KLGVEIICPPNGDNIPQEIRSKSKYFPFFK 180
           +LG ++I PP+ D +P EIR   +++PFFK
Sbjct: 158 RLGKQVIRPPDFDEVPAEIRHNPRFYPFFK 168

[Close]

BLAST of Sed0005979 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.1e-40
Identity = 95/178 (53.37%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 1   MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDLIYSHDYVIELLNGNDTRCFDCFR 60
           MD++DGE Y K+LKL HG                      HDYVIELLNGND+RCFDCFR
Sbjct: 1   MDDVDGEAYFKILKLFHG----------------------HDYVIELLNGNDSRCFDCFR 60

Query: 61  MKKVTFVAFCEDLKAKTNL-KASRYLSVQEKVC-----NSPGFHPGPHSGRVF------- 120
            ++VTFV FCEDLK+KTNL KASRYL+VQEKV       +  +        +F       
Sbjct: 61  RRRVTFVRFCEDLKSKTNLKKASRYLTVQEKVAIFLLIKASRYLTVQEKVAIFLLIKASR 120

Query: 121 -----TKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPN 161
                 K+  FLL+ISHNE NRIV ERFQHSG TIS  FN VL++VCKLG+EII PPN
Sbjct: 121 YLTVQEKVAIFLLIISHNESNRIVVERFQHSGHTISLAFNRVLRKVCKLGLEIISPPN 156

[Close]

BLAST of Sed0005979 vs. ExPASy TrEMBL
Match: A0A6A4KNZ4 (Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22962 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MDELDGETYAKVLKLLHGNVTWRKIFLDIPDARKRDL---------------IYSHDYVI 60
           M++L  ++Y  VL+ LHG+V WR++FLD+P+ ++  L                  HDYV+
Sbjct: 260 MEDLGEDSYNMVLEKLHGDVLWRQMFLDMPEKKENRLDQNTLDNLKFXKGLEFLGHDYVL 319

Query: 61  ELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGR 120
           E+LNG++ RC   FRMK   F+AFCE LK   NLK SRYL++QE+VC             
Sbjct: 320 EVLNGHEDRCHQNFRMKPQVFIAFCEALKLHANLKHSRYLTLQEQVC------------- 379

Query: 121 VFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVL 146
                  FLL I HNER+R+V E FQHSG TIS  F IV+
Sbjct: 380 ------IFLLTIGHNERDRVVQEIFQHSGHTISIYFLIVM 400

[Close]

BLAST of Sed0005979 vs. ExPASy TrEMBL
Match: A0A2N9GND4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-23
Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 33  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVC 92
           +++D    H+Y++E+LNG D+ C++ FRM+K  F++ C+ LK+   L+ SR++SVQEKV 
Sbjct: 312 QRQDGHEGHNYLMEVLNGADSVCYELFRMRKNVFISLCDRLKSSHLLEDSRWVSVQEKVA 371

Query: 93  NSPGFHPGPHSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLG 152
                               F+L I H+ RNR++ +RFQHSG+TISR FN VL  + KL 
Sbjct: 372 -------------------IFVLAIGHSHRNRVLQDRFQHSGETISRHFNDVLLALAKLS 431

Query: 153 VEIICPPNG-DNIPQEIRSKSKYFPFFK 180
            ++I P      IP  IR K KY+P+FK
Sbjct: 432 TDLIKPHTPLTEIPIHIRDKPKYYPYFK 440

[Close]

BLAST of Sed0005979 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 42  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGP 101
           ++V E+LNG++T CFD FRMKK  F+ FC +L+ K  L  SR + V+EKV          
Sbjct: 57  EFVAEVLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVAT-------- 116

Query: 102 HSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNG 161
                      FL +I HN R+R+ + RFQHS +TISR F  VL+ VC+LG E+I     
Sbjct: 117 -----------FLFIIGHNVRHRVASNRFQHSTETISRNFKEVLRAVCRLGKELI-KQES 174

Query: 162 DNIPQEIRSKSKYFPFFK 180
             +P+ I++ SKY+P+FK
Sbjct: 177 IELPERIKNNSKYYPWFK 174

[Close]

BLAST of Sed0005979 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 42  DYVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGP 101
           ++V E+LNG++T CFD FRMKK  F+ FC +L+ K  L  SR + V+EKV          
Sbjct: 67  EFVAEVLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVAT-------- 126

Query: 102 HSGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNG 161
                      FL +I HN R+R+ + RFQHS +TISR F  VL+ VC+LG E+I     
Sbjct: 127 -----------FLFIIGHNVRHRVASNRFQHSTETISRNFKEVLRAVCRLGKELI-KQES 184

Query: 162 DNIPQEIRSKSKYFPFFK 180
             +P+ I++ SKY+P+FK
Sbjct: 187 IELPERIKNNSKYYPWFK 184

[Close]

BLAST of Sed0005979 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 43  YVIELLNGNDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPH 102
           +V ++LNG + +CF+ FRM K  F   C+ L+ +  L+ +  + ++              
Sbjct: 30  FVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIE-------------- 89

Query: 103 SGRVFTKLPFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICP-PNG 162
                 +L  FL +I HN R R V E F +SG+TISR FN VL  V  +  +   P  N 
Sbjct: 90  -----AQLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNS 136

Query: 163 DNIPQE 168
           D +  +
Sbjct: 150 DTLEND 136

[Close]

BLAST of Sed0005979 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 38/130 (29.23%), Postives = 59/130 (45.38%), Query Frame = 0


Query: 51  NDTRCFDCFRMKKVTFVAFCEDLKAKTNLKASRYLSVQEKVCNSPGFHPGPHSGRVFTKL 110
           N+  C    RM    F   CE L  K  L++S  +S+ E V                   
Sbjct: 20  NEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVA------------------ 79

Query: 111 PFFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKRVCKLGVEIICPPNGDN---IPQE 170
             FL++ + N+  R +A RF H+ +TI R F+ VLK + +L VE I P   +    I   
Sbjct: 80  -IFLIICASNDTQRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNR 130

Query: 171 IRSKSKYFPF 178
           ++  ++Y+PF
Sbjct: 140 LQDDTRYWPF 130

The following BLAST results are available for this feature:

BLAST of Sed0005979 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3433792.1	2.8e-43	46.63	hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]	[more]
KAF7123090.1	1.2e-41	42.54	hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]	[more]
KAF7148819.1	1.5e-41	41.92	hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]	[more]
XP_028094390.1	1.9e-31	47.33	uncharacterized protein LOC114294454 [Camellia sinensis]	[more]
XP_028100667.1	3.2e-31	47.33	uncharacterized protein LOC114300013 [Camellia sinensis] >XP_028120812.1 unchara...	[more]

BLAST of Sed0005979 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCZ7	9.1e-40	53.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1	[more]
A0A6A4KNZ4	1.4e-27	43.75	Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianu...	[more]
A0A2N9GND4	3.5e-23	41.22	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1	[more]
A0A1S3E695	1.3e-22	42.75	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=...	[more]
A0A3Q7Y331	1.3e-22	42.75	protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=...	[more]

BLAST of Sed0005979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.0e-11	30.95	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	2.8e-09	29.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 111..168
None	No IPR available	PANTHER	PTHR22930:SF218	DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEIN	coord: 111..168 coord: 32..91
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 32..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005979.1	Sed0005979.1	mRNA