Sed0005932 (gene) Chayote v1

Overview


Name	Sed0005932
Type	gene
Organism	Sechium edule (Chayote v1)
Description	nitrogen regulatory protein P-II homolog
Location	LG09: 37305809 .. 37310582 (-)
RNA-Seq Expression	Sed0005932
Synteny	Sed0005932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATTAAAAATGTAATTTTCTCTTTTTTTTTATGGGGCGCTATTTGGGGGTTTCAATCAATCAGCTAATAAAAACTGTGCTCTCAAATCCAACAACAATGGCGGCAACAACAAACCCCACGGTTCTTCTTCTTCGGTTCCACTCTCCTCTTCCACAGCTCCCTCTCTTCCCTCCGATCACTCCCAATTCCGCCGCCGGCCGATTCGCCCGGTTCTGCCTCGCCGGCAAGCCTTCCGATCGCCAAATCCGTCCACTGATCAAAGCTCACGGCTCTCACGGTAGGTACCGTTCTCCATCTTTCCTTCGCACTCTCGGATTTGATCTCTGTTTGTGATCCTTTTGGTTTCTTGTAGATTATGCGCCTGATTCGAAATTCTACAAGGTGGAGGCGATCCTTAGGTATGTGTACGTTTCTAGGGTTTTGGAGTGTTTCTTTTTTTCTTTTTTTAGTGATTTTGATGTATTTTATTGGTTCTGATGTCTGATCTGTTGGAGTGTTTGGACGGGATAGGCCCTGGAGGGTTCAAAATGTTTCTTCGGTAAGTGCTCTAGTTAAAACCTTTGATATGATCACTTGTTTCTGATTTTACGAATTGGAATATCACTTGTTTGGTTCTATTGTTGAATTATGAATTAATTGTGAATGGATGGTCGATACGGTGAAAGAAATAAGGGGTGTTTGTCGCATGGGGATGAAATGGAGGAGAATGAGAATGAGAAAGTTGATGATCGGTGGTGTTTGGGCCGTTGGGGATCATTCTCCCCACAATCACATTTTCGTGTAAACAAATTTTTGGTTATGTGGTTGGGGGAAAGGAAATAAGAATGATTATAGCCTTATTGGGGGATGATAATTAAGGGGAGACTAGGAAGAAGAATGATTATTCGTGTTTGAGGTGAAATGTATGATTATGAGGAGCATGATTATTTGTGTTTGGGTTGTGAAGGGAATGATTATGGAGAAAATAAAATAATGAGAGTGAAAAATAGTTACGGGGAGATTAAAATGTGGTTAGGAGAAGAATAAAAGATAGTTGGGTCAGGTAGAGAATGAATAGGGGATTTTGGGGAAATTTGATTATGGGGGAATGACTGCCATCAGAGGAAGCTTAATTTAGGACTAAAATACCATGGTGATTATGGGAGGGAAAATTAGCAGCTGCTAACTTGCTATCATACATTTTTTGTTCAATAATCTATGGGGGTTGGGATCCCAAGGGGTGGCCGAGTGGTTGAAAACTTGGGGTTTGAAGGTATGTTCTCTTCAAGGTCTCAGGTTCGAGACTCACTTGTGACATTACTCCTTCGATGTCTAGGGTGTCTGGCCTAGGGATGGGCGTGGTTACCCTTGTTTCACAACATATGGGGTTGGAGAATGCAAATCAGTAATCTCTTGATTGAGGATATATGCTTTAAAAAGTGGAGTATGCTCAAATTTGCTACTTGCATTTCTAGATTGGTTGCATCATCGCATGCTATCTTGTCATTGTTATATAGAATAAAAAGGCTAATCTACTTTATGAAGTCTAGCTTTAATGCTCGTCCATAGGTTAAAGAATCAATTCAAGATATATGCTAACACTAGTGACTTACATTTTCTTAAAAACTTTTTGAACTTTAATCTGTCATACCTTTCAAAGACGCGTTTTCACTGTCCAACCGAAAGCATAGCCTACATTTTATGTGTTCGAATGGTAGCAAAAGGGAGGAAATGGTGAAAATTATGCAATTTTTTCTGTTTTGTTTTAAAGATCCTATTCGTATTAAATTGTTCTTTTGTTCCTTGGAAAAAATGAAGGCATTGCTGAAAATGGGTATTCGAGGTGTAACAGTATCTGATGTGAGGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCAGGGTGGTAAGATCACATCGTTCAGGATTCTATCTGCTTAGGTGCATGGTTAGGGAATATATATGTACATGCTATTCTGTTTCTAGACTCATATGCTTTCTATCAGTCATTAGTGGTGTTTGCTTATGATTCCATTTAACTTTATTCTCTTTTATTTACTGTTCAGGGTCTGAATTTTATGAAGACAATTTTGTAGCTAAAGTTAAGATGGAAATTGTGGTCATCAAAGACCAGGTAAAAGAAATGCAAGTGTGTTTTACTTTTTCCATTGTGAGAAGAATCGAAATTTGTTGAATATATATCGTAAGCTAATTACTGCATTAGAATTTGTTGATTAAATTTAAGTATCTATCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGTAAATGATAATTCTATTTTATTAATAGCTCAGCTCCTTATATGATTATTTCTAAACTTTTTTGCTAAATGTCTATTCTCTGTATCTGCTGTCTTGTTTATTATGCGGTTGATTCCATTTGTTTTTTTTTTTTTTTTTGAATAAGAAACGATTTCATTGATGCATGAAATTACAATATAGATATATATTATTAAAGATCAAATAAGCGATCTCCAGTAATTAAGTAGAGTTTCATAACTAAAAGTATAAAATAACGGAGTAAGTTTACACCAAGATATAACGTGATGAATAATGGTGTAAAAAAAATCATGGTATTTTGATCTTTTATCATGGAAATTCGTCCTATTTCGTTCCAACCACATGATCCAACAAAATACCTTGATAAAAATTGTGGAAATTATGAAACCAACATTTTTTATGTTTTCCATTGTTTTCAGATTTTGAACTTGAAATTCTTAAGTGGTTTAATATTAAAAATTAAACTCTTTAATAAATATAATATTTCATATCATAAACTCAATTTATTTTTATTAAATTAAATATGGATGATAGAATATATTATAAATTATATTATATTGTATTGTATAACAAAAATGGTACGAAATTTATTACATAAAAATGTTCATAAATGAATTAATAATAGTTTATATTTAACCTAATTTTTAGTTTTCAACTTAGAACACATTTTGAACAATTATTTAATTTAGAATTCAATTTCTGAATTTGCCATTAAATACTTATCCGAAAACATGAAATACAACTTTATTTTCAAATGATTTTCTGCATTGTTTATTTGGGATGGATGGCATAAATGCGCCATCTGACATCATGTTTTGGTTAAGCGTAAAAGAAAGAGTGTTGTTTCAATGGACTAATCATGTGAAGTTGTTGGCTGAAGAGTAGTTTAAATTGCCACTTTATAGCTGATTGTATGATGATTTTTAATGCAAAGTACGTGGACTTTGCCAAAAAAAAAATTTCTTATTGGGTTCCATTTCACAACCAATTTTTCTTGTGATATTTCCAAGTTTGAGACAATTTGCACATATCTCGACTATTATCACGGGACATACCACCTATTGAGGATTTCACATTGATTAAGTGAGAATATCTCCTAGGGTGTGTTTGAGCCCCCGTTTATGTAAACGGCCGGATTGGTTATAATAACACAATTGATGTTTGCCCCACCGTTTATTATAAACGATGGTTACCTAAACCTCCGTGCCTGTTTATCTAAATCTACGTGCTTGTTTATCTTAACCTTACATATATTACTTTTTGTTACATAACCAGCCTCTCAAACACTGTTTATCATAATTCCATGTTATAATAACATGCCTCTCAAACACCACTTATAATAACTCACCGTTTATCATAACTTTCCATCTATCATAACCAAACCGGTGCTCCAAACGCACCCCTAGTGTTTATAAGGTAGGTGAACTACTCATCTCATCACCAATTGTTTTGAGATGGATATCCATTCTATCTAATACCATGTGACCCTACAATATTTGGATGTCAAAGAAATTTATAGGAAATTAGTTCCTAAGTAGATGGTTATTATGGATTGAACTCATAACTCTTATCATAGTTAATTGACAATGAGTGGAATAGCCCACCTGTCTTATAAATGTTAGAAAATCTCTTTACATTACTGGAGATCATTACTCATTACCAGATTGAAGGAAAAGCATAGCTCTGCGTTCAATTTTCACATGTAATGAAGCCTTTTTAGGCTCTTAACAAACTTCTGACAAAATTTTCATTTCACACAGTGATACCAGTCTCCGACGTTATTAGAGTCCGTACAGGTATCTTGTCAGCTTCAAACTATCAAAATTTATAGTTAGATCATTTCACGACTCGTGCCTTATACGATGCCTAACTCACAGGCGAACGTGGAGAAAAGGCGGAGAGGATGACCGGAGGGCGATACGACATGTGTGTCAATCAAGTGTAAGACAGATGAAGCTGTTTCGAGTTTTCAACCTTTTTCCCCAGGGTATTGCTGCTACCTTCCTCAGATTGGTCCTGTGGAGAAGAAATAAAAGAGCTTGTAACCTGTAAGTCAGGTCAGTTTCTTTCTCTTGAAATCATTAGACATGTAAATATGTAACTTGCTAATGTTGTTGTCATAAAAATGAAGCCAAATTTGGCCATAATTTATGTGCAAGCTACCATACCATCTTCTAATGTATCTCTGATTTGGTAGTGAATCCAAGGAGAGGAGTTGTCTTTTTGTTGGTATTGTGCCAAACCGACAATTGAACTAATACCCTTGATTTTTTAACAATTAGATCCAAACTGTTGTCCAATAAAAAACAAAACTATTGGTTCGGAACGGTTTTTTGTTTTAATTTTAAACACAATTTGGTTTATTTTTCAATTTTTGTAATAACATTTTTCATGAATATAGCATAATATTTATAATGCTTGTGCTTAATATTTATATCTAAATTTATT

mRNA sequence

AAATAATTAAAAATGTAATTTTCTCTTTTTTTTTATGGGGCGCTATTTGGGGGTTTCAATCAATCAGCTAATAAAAACTGTGCTCTCAAATCCAACAACAATGGCGGCAACAACAAACCCCACGGTTCTTCTTCTTCGGTTCCACTCTCCTCTTCCACAGCTCCCTCTCTTCCCTCCGATCACTCCCAATTCCGCCGCCGGCCGATTCGCCCGGTTCTGCCTCGCCGGCAAGCCTTCCGATCGCCAAATCCGTCCACTGATCAAAGCTCACGGCTCTCACGATTATGCGCCTGATTCGAAATTCTACAAGGTGGAGGCGATCCTTAGGCCCTGGAGGGTTCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACAGTATCTGATGTGAGGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCAGGGTGGGTCTGAATTTTATGAAGACAATTTTGTAGCTAAAGTTAAGATGGAAATTGTGGTCATCAAAGACCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGTGATACCAGTCTCCGACGTTATTAGAGTCCGTACAGGCGAACGTGGAGAAAAGGCGGAGAGGATGACCGGAGGGCGATACGACATGTGTGTCAATCAAGTGTAAGACAGATGAAGCTGTTTCGAGTTTTCAACCTTTTTCCCCAGGGTATTGCTGCTACCTTCCTCAGATTGGTCCTGTGGAGAAGAAATAAAAGAGCTTGTAACCTGTAAGTCAGGTCAGTTTCTTTCTCTTGAAATCATTAGACATGTAAATATGTAACTTGCTAATGTTGTTGTCATAAAAATGAAGCCAAATTTGGCCATAATTTATGTGCAAGCTACCATACCATCTTCTAATGTATCTCTGATTTGGTAGTGAATCCAAGGAGAGGAGTTGTCTTTTTGTTGGTATTGTGCCAAACCGACAATTGAACTAATACCCTTGATTTTTTAACAATTAGATCCAAACTGTTGTCCAATAAAAAACAAAACTATTGGTTCGGAACGGTTTTTTGTTTTAATTTTAAACACAATTTGGTTTATTTTTCAATTTTTGTAATAACATTTTTCATGAATATAGCATAATATTTATAATGCTTGTGCTTAATATTTATATCTAAATTTATT

Coding sequence (CDS)

ATGGGGCGCTATTTGGGGGTTTCAATCAATCAGCTAATAAAAACTGTGCTCTCAAATCCAACAACAATGGCGGCAACAACAAACCCCACGGTTCTTCTTCTTCGGTTCCACTCTCCTCTTCCACAGCTCCCTCTCTTCCCTCCGATCACTCCCAATTCCGCCGCCGGCCGATTCGCCCGGTTCTGCCTCGCCGGCAAGCCTTCCGATCGCCAAATCCGTCCACTGATCAAAGCTCACGGCTCTCACGATTATGCGCCTGATTCGAAATTCTACAAGGTGGAGGCGATCCTTAGGCCCTGGAGGGTTCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACAGTATCTGATGTGAGGGGCTTTGGTTCTCAAGGTGGATCCACAGAGAGGCAGGGTGGGTCTGAATTTTATGAAGACAATTTTGTAGCTAAAGTTAAGATGGAAATTGTGGTCATCAAAGACCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGTGATACCAGTCTCCGACGTTATTAGAGTCCGTACAGGCGAACGTGGAGAAAAGGCGGAGAGGATGACCGGAGGGCGATACGACATGTGTGTCAATCAAGTGTAA

Protein sequence

MGRYLGVSINQLIKTVLSNPTTMAATTNPTVLLLRFHSPLPQLPLFPPITPNSAAGRFARFCLAGKPSDRQIRPLIKAHGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKAERMTGGRYDMCVNQV

Homology

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BLAST of Sed0005932 vs. NCBI nr
Match: XP_038899657.1 (nitrogen regulatory protein P-II homolog [Benincasa hispida])

HSP 1 Score: 304.7 bits (779), Expect = 6.4e-79
Identity = 160/197 (81.22%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 24  AATTNPTVLLLRFHSPLPQLPLF---PPITPNSAAGRFARFCLAGKPSDRQIRPLIK-AH 83
           A TTNPT LLL F+SPLPQ   F     IT +S A RF+ F LA KPS+RQI PL+K A 
Sbjct: 3   AITTNPTALLLHFYSPLPQFHHFTSSSSITSSSTAVRFSHFHLANKPSNRQILPLVKAAQ 62

Query: 84  GSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSE 143
           GS DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVSDV+GFGSQGGSTER GGSE
Sbjct: 63  GSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGSE 122

Query: 144 FYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGE 203
           F EDNFVAKVKMEIVV+KDQVEAVI+KIIEEARTGEIGDGKIFVIP+SDVIR+RTGERGE
Sbjct: 123 FSEDNFVAKVKMEIVVVKDQVEAVINKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGE 182

Query: 204 KAERMTGGRYDMCVNQV 217
           +AERMTGGRYDM VNQV
Sbjct: 183 RAERMTGGRYDMSVNQV 199

[Close]

BLAST of Sed0005932 vs. NCBI nr
Match: XP_023548897.1 (nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 9.3e-78
Identity = 160/197 (81.22%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 23  MAAT-TNPTVLLLRFHSPLPQLPLF--PPITPNSAAGRFARFCLAGKPSDRQIRPLIKAH 82
           MAAT TNPT LLL FHSPLP+LP F    ITPN A  RF++F LA KPS+R+I PL+KA 
Sbjct: 1   MAATATNPTALLLPFHSPLPKLPHFASSSITPNFAV-RFSQFNLAYKPSNRRILPLVKAQ 60

Query: 83  GSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSE 142
            S DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGSE
Sbjct: 61  ASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSE 120

Query: 143 FYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGE 202
           F EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERGE
Sbjct: 121 FSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGE 180

Query: 203 KAERMTGGRYDMCVNQV 217
           +AERMTGGR DM V++V
Sbjct: 181 RAERMTGGRSDMAVDRV 196

[Close]

BLAST of Sed0005932 vs. NCBI nr
Match: KAG6575740.1 (Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014290.1 Nitrogen regulatory protein P-II-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-76
Identity = 159/198 (80.30%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 23  MAAT-TNPTVLLLRFHSPLPQLPLF---PPITPNSAAGRFARFCLAGKPSDRQIRPLIKA 82
           MAAT TNPT LLL F SPLP+LP F     ITPN A  RF++F LA KPS+R+I PL+KA
Sbjct: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFAV-RFSQFNLAYKPSNRRILPLVKA 60

Query: 83  HGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGS 142
             S DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGS
Sbjct: 61  QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGS 120

Query: 143 EFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERG 202
           EF EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERG
Sbjct: 121 EFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERG 180

Query: 203 EKAERMTGGRYDMCVNQV 217
           E+AERMTGGR DM V++V
Sbjct: 181 ERAERMTGGRSDMAVDRV 197

[Close]

BLAST of Sed0005932 vs. NCBI nr
Match: XP_022954086.1 (nitrogen regulatory protein P-II homolog [Cucurbita moschata])

HSP 1 Score: 294.3 bits (752), Expect = 8.7e-76
Identity = 158/198 (79.80%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 23  MAAT-TNPTVLLLRFHSPLPQLPLF---PPITPNSAAGRFARFCLAGKPSDRQIRPLIKA 82
           MAAT T PT LLL F SPLP+LP F     ITPN A  RF++F LA KPS+R+I PL+KA
Sbjct: 1   MAATATKPTALLLPFPSPLPKLPHFASSSSITPNFAV-RFSQFNLAYKPSNRRILPLVKA 60

Query: 83  HGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGS 142
             S DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGS
Sbjct: 61  QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGS 120

Query: 143 EFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERG 202
           EF EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERG
Sbjct: 121 EFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERG 180

Query: 203 EKAERMTGGRYDMCVNQV 217
           E+AERMTGGR DM V++V
Sbjct: 181 ERAERMTGGRSDMAVDRV 197

[Close]

BLAST of Sed0005932 vs. NCBI nr
Match: XP_022991627.1 (nitrogen regulatory protein P-II homolog [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 9.6e-75
Identity = 153/195 (78.46%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 24  AATTNPTVLLLRFHSPLPQLPLF--PPITPNSAAGRFARFCLAGKPSDRQIRPLIKAHGS 83
           A TT PT LLL F SPLP+LP F     TPN A  RF++F L  KPS+R+I PL+KA  S
Sbjct: 3   ATTTKPTALLLPFPSPLPKLPHFASSSFTPNFAV-RFSQFNLVYKPSNRRILPLVKAQAS 62

Query: 84  HDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFY 143
            DY PD KFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGSEF 
Sbjct: 63  LDYVPDFKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFS 122

Query: 144 EDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 203
           EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERGE+A
Sbjct: 123 EDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERA 182

Query: 204 ERMTGGRYDMCVNQV 217
           ERMTGGR DM V++V
Sbjct: 183 ERMTGGRSDMAVDRV 196

[Close]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot
Match: Q9ZST4 (Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-56
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 68  SDRQIRPLIKAHGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGS 127
           ++ ++ P++ A  S DY PDSKFYKVEAI+RPWR+Q VSSALLK+GIRGVTVSDVRGFG+
Sbjct: 52  NNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGA 111

Query: 128 QGGSTERQGGSEFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVS 187
           QGGSTER GGSEF ED FVAKVKMEIVV KDQVE+VI+ IIE ARTGEIGDGKIFV+PVS
Sbjct: 112 QGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVS 171

Query: 188 DVIRVRTGERGEKAERMTG 207
           DVIRVRTGERGEKAE+MTG
Sbjct: 172 DVIRVRTGERGEKAEKMTG 190

[Close]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot
Match: Q6AUR2 (Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GLB PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.4e-54
Identity = 126/210 (60.00%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 17  LSNPTTMAATTNPTVLLLRFHSPLPQLPLFPPITPNSAAGRFARFCLAGKPSDRQIRPLI 76
           +S+P T AA    +  +LR H P P  P  PP T  +     +R  LA +    Q RPL 
Sbjct: 1   MSSPATAAAAA-ASCGVLRHHHP-PASPRPPPTTTTTT----SRLLLASRSRGLQ-RPLR 60

Query: 77  KAH----------------GSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVS 136
             H                 +  Y P+S+FYKVEAILRPWRV  VSS LL+MGIRGVTVS
Sbjct: 61  VNHAPPRRLPPTAARAQSAAAAGYQPESEFYKVEAILRPWRVPYVSSGLLQMGIRGVTVS 120

Query: 137 DVRGFGSQGGSTERQGGSEFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGK 196
           DVRGFG+QGGSTER  GSEF ED F+ KVKMEIVV KDQVEAV+DKIIE+ARTGEIGDGK
Sbjct: 121 DVRGFGAQGGSTERHEGSEFAEDTFIDKVKMEIVVSKDQVEAVVDKIIEKARTGEIGDGK 180

Query: 197 IFVIPVSDVIRVRTGERGEKAERMTGGRYD 211
           IF+IPVSDVIR+RTGERGE+AERM GG  D
Sbjct: 181 IFLIPVSDVIRIRTGERGERAERMAGGLAD 203

[Close]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot
Match: O30794 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=glnB PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 92  KVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFYEDNFVAKVKM 151
           KVEAI+RP+++  V  AL+  GI G+TVS+VRGFG Q G TER  GSE Y   F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSE-YTVEFLQKLKV 62

Query: 152 EIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 202
           EIVV  +QV+ V+DKII  ARTGEIGDGKIF+ PV  VIR+RTGE+  +A
Sbjct: 63  EIVVDDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVIRIRTGEKNTEA 111

[Close]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot
Match: Q47894 (Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 0


Query: 92  KVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFYEDNFVAKVKM 151
           KVEAI+RP+++  V  AL+  GI G+TVS+VRGFG Q G TER  GSE Y   F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSE-YTVEFLQKLKV 62

Query: 152 EIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 202
           EIVV  +QV+ V+DKII  ARTGEIGDGKIF+ PV  V+R+RTGE+  +A
Sbjct: 63  EIVVEDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVVRIRTGEKNTEA 111

[Close]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot
Match: O66513 (Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glnB PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.9e-27
Identity = 59/110 (53.64%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 92  KVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFYEDNFVAKVKM 151
           K+EAI++P+++  V  AL+++GI G+TV++V+GFG Q G TE   G+E+  D F+ KVK+
Sbjct: 3   KIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGFGQQKGHTEIYRGTEYVID-FLPKVKI 62

Query: 152 EIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 202
           E+VV  + VE V++ I++ A+TG +GDGKIF+IPV DVIR+RTGERGE+A
Sbjct: 63  EVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQA 111

[Close]

BLAST of Sed0005932 vs. ExPASy TrEMBL
Match: A0A6J1GPW8 (nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111456457 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.2e-76
Identity = 158/198 (79.80%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 23  MAAT-TNPTVLLLRFHSPLPQLPLF---PPITPNSAAGRFARFCLAGKPSDRQIRPLIKA 82
           MAAT T PT LLL F SPLP+LP F     ITPN A  RF++F LA KPS+R+I PL+KA
Sbjct: 1   MAATATKPTALLLPFPSPLPKLPHFASSSSITPNFAV-RFSQFNLAYKPSNRRILPLVKA 60

Query: 83  HGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGS 142
             S DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGS
Sbjct: 61  QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGS 120

Query: 143 EFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERG 202
           EF EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERG
Sbjct: 121 EFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERG 180

Query: 203 EKAERMTGGRYDMCVNQV 217
           E+AERMTGGR DM V++V
Sbjct: 181 ERAERMTGGRSDMAVDRV 197

[Close]

BLAST of Sed0005932 vs. ExPASy TrEMBL
Match: A0A6J1JMD1 (nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC111488188 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.7e-75
Identity = 153/195 (78.46%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 24  AATTNPTVLLLRFHSPLPQLPLF--PPITPNSAAGRFARFCLAGKPSDRQIRPLIKAHGS 83
           A TT PT LLL F SPLP+LP F     TPN A  RF++F L  KPS+R+I PL+KA  S
Sbjct: 3   ATTTKPTALLLPFPSPLPKLPHFASSSFTPNFAV-RFSQFNLVYKPSNRRILPLVKAQAS 62

Query: 84  HDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFY 143
            DY PD KFYKVEAILRPWR+QNVSSALLKMGIRGVTVS+V+GFGSQGGSTER GGSEF 
Sbjct: 63  LDYVPDFKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHGGSEFS 122

Query: 144 EDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 203
           EDNFVAKVKMEIVV+K+QVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIRVRTGERGE+A
Sbjct: 123 EDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERA 182

Query: 204 ERMTGGRYDMCVNQV 217
           ERMTGGR DM V++V
Sbjct: 183 ERMTGGRSDMAVDRV 196

[Close]

BLAST of Sed0005932 vs. ExPASy TrEMBL
Match: A0A6J1DC20 (nitrogen regulatory protein P-II homolog OS=Momordica charantia OX=3673 GN=LOC111018713 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.1e-71
Identity = 153/201 (76.12%), Postives = 163/201 (81.09%), Query Frame = 0


Query: 23  MAATTNPTVLLLRFHSPLPQLPLFPP-------ITPNSAAGRFARFCLAGKPSDRQIRPL 82
           MAAT      LL   SP P+L L          ITPN    RF+ F +A K   RQI P+
Sbjct: 1   MAATVIKPAALLPL-SPFPELLLSTSTSTSTAIITPNFT--RFSHFTVAKKRPTRQILPV 60

Query: 83  IKAHGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQ 142
           +KA GS +Y PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQ
Sbjct: 61  VKAQGSLEYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQ 120

Query: 143 GGSEFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTG 202
           GGSEF EDNFVAKVKME+VVIKDQVEAVIDKIIEEARTGEIGDGKIFV PV+DVIRVRTG
Sbjct: 121 GGSEFSEDNFVAKVKMEVVVIKDQVEAVIDKIIEEARTGEIGDGKIFVTPVADVIRVRTG 180

Query: 203 ERGEKAERMTGGRYDMCVNQV 217
           ERGEKAERMTGGRYDM VN+V
Sbjct: 181 ERGEKAERMTGGRYDMSVNEV 198

[Close]

BLAST of Sed0005932 vs. ExPASy TrEMBL
Match: A0A5A7UU45 (Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00060 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 146/193 (75.65%), Postives = 155/193 (80.31%), Query Frame = 0


Query: 24  AATTNPTVLLLRFHSPLPQLPLFPPITPNSAAGRFARFCLAGK-PSDRQIRPLIKA-HGS 83
           A TTN TVLLL           F  ITP       + F LA   PS+RQI PL+KA  GS
Sbjct: 5   ATTTNLTVLLLPPRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVKATQGS 64

Query: 84  HDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFY 143
            DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVSDV+GFGSQGGS ER GGSEF 
Sbjct: 65  LDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFS 124

Query: 144 EDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 203
           EDNFVAKVKMEIVV+KDQVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIR+RTGERGE+A
Sbjct: 125 EDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERA 184

Query: 204 ERMTGGRYDMCVN 215
           ERMTGGR DM  N
Sbjct: 185 ERMTGGRSDMSDN 197

[Close]

BLAST of Sed0005932 vs. ExPASy TrEMBL
Match: A0A1S3CEB3 (nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 146/193 (75.65%), Postives = 155/193 (80.31%), Query Frame = 0


Query: 24  AATTNPTVLLLRFHSPLPQLPLFPPITPNSAAGRFARFCLAGK-PSDRQIRPLIKA-HGS 83
           A TTN TVLLL           F  ITP       + F LA   PS+RQI PL+KA  GS
Sbjct: 5   ATTTNLTVLLLPPRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVKATQGS 64

Query: 84  HDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGSQGGSTERQGGSEFY 143
            DY PDSKFYKVEAILRPWR+QNVSSALLKMGIRGVTVSDV+GFGSQGGS ER GGSEF 
Sbjct: 65  LDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFS 124

Query: 144 EDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVSDVIRVRTGERGEKA 203
           EDNFVAKVKMEIVV+KDQVEAVIDKIIEEARTGEIGDGKIFVIP+SDVIR+RTGERGE+A
Sbjct: 125 EDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERA 184

Query: 204 ERMTGGRYDMCVN 215
           ERMTGGR DM  N
Sbjct: 185 ERMTGGRSDMSDN 197

[Close]

BLAST of Sed0005932 vs. TAIR 10
Match: AT4G01900.1 (GLNB1 homolog )

HSP 1 Score: 221.1 bits (562), Expect = 8.7e-58
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 68  SDRQIRPLIKAHGSHDYAPDSKFYKVEAILRPWRVQNVSSALLKMGIRGVTVSDVRGFGS 127
           ++ ++ P++ A  S DY PDSKFYKVEAI+RPWR+Q VSSALLK+GIRGVTVSDVRGFG+
Sbjct: 52  NNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGA 111

Query: 128 QGGSTERQGGSEFYEDNFVAKVKMEIVVIKDQVEAVIDKIIEEARTGEIGDGKIFVIPVS 187
           QGGSTER GGSEF ED FVAKVKMEIVV KDQVE+VI+ IIE ARTGEIGDGKIFV+PVS
Sbjct: 112 QGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVS 171

Query: 188 DVIRVRTGERGEKAERMTG 207
           DVIRVRTGERGEKAE+MTG
Sbjct: 172 DVIRVRTGERGEKAEKMTG 190

The following BLAST results are available for this feature:

BLAST of Sed0005932 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899657.1	6.4e-79	81.22	nitrogen regulatory protein P-II homolog [Benincasa hispida]	[more]
XP_023548897.1	9.3e-78	81.22	nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6575740.1	1.8e-76	80.30	Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_022954086.1	8.7e-76	79.80	nitrogen regulatory protein P-II homolog [Cucurbita moschata]	[more]
XP_022991627.1	9.6e-75	78.46	nitrogen regulatory protein P-II homolog [Cucurbita maxima]	[more]

BLAST of Sed0005932 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZST4	1.2e-56	79.86	Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1...	[more]
Q6AUR2	7.4e-54	60.00	Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=3994...	[more]
O30794	2.0e-27	60.00	Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC ...	[more]
Q47894	2.7e-27	59.09	Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3...	[more]
O66513	5.9e-27	53.64	Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=g...	[more]

BLAST of Sed0005932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPW8	4.2e-76	79.80	nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JMD1	4.7e-75	78.46	nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1DC20	3.1e-71	76.12	nitrogen regulatory protein P-II homolog OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7UU45	1.2e-67	75.65	Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CEB3	1.2e-67	75.65	nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000...	[more]

BLAST of Sed0005932 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01900.1	8.7e-58	79.86	GLNB1 homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002187	Nitrogen regulatory protein PII	PRINTS	PR00340	PIIGLNB	coord: 112..130 score: 48.81 coord: 173..193 score: 63.96 coord: 142..165 score: 34.72 coord: 91..106 score: 34.56
IPR002187	Nitrogen regulatory protein PII	SMART	SM00938	P_II_3	coord: 93..195 e-value: 9.8E-46 score: 167.9
IPR002187	Nitrogen regulatory protein PII	PFAM	PF00543	P-II	coord: 93..195 e-value: 4.7E-34 score: 117.1
IPR002187	Nitrogen regulatory protein PII	PANTHER	PTHR30115	NITROGEN REGULATORY PROTEIN P-II	coord: 69..211
IPR002187	Nitrogen regulatory protein PII	PROSITE	PS51343	PII_GLNB_DOM	coord: 90..202 score: 36.245872
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 79..212 e-value: 8.4E-58 score: 196.2
None	No IPR available	PANTHER	PTHR30115:SF11	NITROGEN REGULATORY PROTEIN P-II HOMOLOG	coord: 69..211
IPR017918	Nitrogen regulatory protein PII, conserved site	PROSITE	PS00638	PII_GLNB_CTER	coord: 173..186
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 91..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005932.1	Sed0005932.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0042304	regulation of fatty acid biosynthetic process
biological_process	GO:0006808	regulation of nitrogen utilization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
molecular_function	GO:0010307	acetylglutamate kinase regulator activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030234	enzyme regulator activity