Sed0005840 (gene) Chayote v1

Overview


Name	Sed0005840
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA topoisomerase
Location	LG12: 4178914 .. 4192313 (-)
RNA-Seq Expression	Sed0005840
Synteny	Sed0005840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTCTTCTCCTCGTTCATCGCGTCCATGTTTATTCGCACTTGAGCTCGAAGCTTTTGCCCAGCGATTGCGAAGTTTCAGTCGCCGTTGAGAAGAAGAATCCTCAATTCACTCAGAAATTCGCCGGATTCTGCCGTGTAAGCTCCGGCGACAGTCGTCATCATGGTGGCTTCATCGGTTCTCATGGTGTGTGTTTAAACCTGTTAATCGTTTTCCGAACTTCAGCCAAGTTCTTCGTCTACAGCTTTTTTTTGCTATCTAGGTTGTGTGTAACTGCTTCTAATCGCTGTTTCAGGTGGCGGAGAAGCCGAGCATTGCGCTCTCGATTGCTTCGGCTCTCTCTCATGGCCAAGTAAGTTGTTGATACACTTTTTGAAGCTCGTAGCGTTTGATAATTGTAGGTTGGCGATCACTGTAGGGTTTTGAATCCATTTTTCAGGCCGTTTTTGTTTTTCGCTAGGCCGGACGACTTAGACAGTAGAGTATATGTAGGTTTTAGAGGACGAACAACGGTTCTCAGTAGGTAGAGTTGATTAGCATTCATAGGATAGCCTGCACAAGCTATTCTTGGAATGTATAATTCGGTGTAATTGTACATTAGCTTGCTCGTATCATTTTGCTTATTCTAGGATATGTAATTTGAACATTACAATGTTTAATTTTGGCATGTGTGGCGTCTCATTGACTGCTCGTGCATATATAAAGAAGGCCTAACCACGGCAAAAAGTTTCATGGAAAGCCTGTTTTTATTTTGATGTAGGGTTTTTTAGATTTGAGTTATCATTATTATTATTTTGTGTTGGGCTATTAAAGAAATTGGGTTCAATGGGCAGGCTTTCACGTCTCCAAATTGTTTTTTTTTCTATACTTTTCATTTTATTGATGTAAGGTGTTGTTTCATTGTCAAAAAAGAAAAAAAAAAGAAAAGAAGAAGACAGTTTTGGAAGCAATACTGCTATGTAAGCTCAAATATTAATTTTACAGATGTCTACAAGAAAGGGTAGCACAGATGTACATGAATTTGATGGGAAATTTCTTGGGCTTCATGCCCATTATAAAGTGACATCGGCGATCGGACATATTTTCAGGTGCATTTTTCATTTAATTACATTTAGAGTTGTGAATGCTATTTTGTTCCTTATAAATCATATATGCGAGAGTGTGAAGACTGAAGAAAATTCAATGATTTTGCAGCCTATGGTGAATGGATATTTCTTTGTTTCTGCATTGAACTTTGTACTTTGTATTTAATCTTTTCTACTCCGATAACATTTAGTCCTCCAGCCTGTCTTTTACAATTGTGCATGCTTTTCCTCTATCACTCTGACATGCTTTAATATTTTTCTTGCAATTGGAATCTTGGATGTGATAGGATTGACCTTTAAGAGGAATTAGGATTATTATAGAGGTATATGGGCAATTAGTTGAGAGTTAATTAGGATATTTTGTTATAAACAAGAGAGGATACGTGAGAGGAAATTACACAATTATTGAGTGGAGTTATTTTGGGCTTGGAGGTTATTCTCAAGAATGGGAGGTTCAAGTACCGATCAAATTCTTGGGTAATTTGTATTTTTCTTTTCATTTTATATTTCAATATATCTTGGATCATTTCACGATGTTGTGTGGGTGTTTATTAACATGTGATTGGAATCAACCATGAGCTGACGTAGTGGAGGGCTTTGGAAAACTAAGAGACGTTGAATGAGTTCAATCTATAGTGACCGTCTACCTAGGAATTAATTTCCTACGAGTTCTCTTGGCAACTAAATGTAGTAGGGTCAGACGATTTTCTCATAACTTGTAAGTGTCAAGATGCACATAAGCTGGATTGAATTCTCACAAATATAAAACAAACATATGATTGAATCTCTATGCATTAAATGATTGTTTGTCTAGAGCCCAAAGCTGGGCATGTTGTTTTTCATTGATAAATGGAATTTTCTGAATTGCATGATATTCCTTGTATGAATTTCTTTTTTTCTCTTTTCTTTTCTTTTACCTTTTTTCACTCGCTCTCGGAGTTTGTTTGTATCATTTCTACAATTTTGCATCTTTCATTTATCTGTGAGAACTGAGAAGTTTTTGTAGGCCCCTTCCATTCTTTTGTGGGCATTTGAGTATTTTTTTGTTGGCTTCTCCCCCCCTTTTTTGTATGCCCTTGTATCCTTTCTTCAAGAGTTTGGATAACTATACAAAAATATGAGAAGTCAAATTTTGTGAAGTTACTCTTTTTTTTATAGCTATGACTCTTTACTGAATAGTTGGAGATCCCTTTTGTAATTGGCTCTAGCCATATAATTTCATACTTATAATGAAATTGTTTCTTATCCAGAAAAAAAGAGAAGTCATTAACATCATATGGTTGTCTTAAAAGACTATTATTCTTTTTTATTTTTAATATCCATGAGTGCCCGAGCCAACTTACTTCTCACGAACAATTGCTTGACCCTTCTACTCTACATTTGGTTGTCAAGGAAATTCATAGGGAATTAATTCCTAGGCAGTTTGCTACCGTGGAGTGAACCTATAGCCTCTTAATTCCTTAAGGCTTTCTTGATCAGTGGACCAACTTACAGTGGTTGTCCTACAAGTTAGTTGGAGTGGGCATAAATTGACTTGGATAGTAATTAGTCATTTGGAAGTGATAAATAGTGTTATATGGTTGTCCTATGAGATTAGTATAAGTGGGCATAAGTTGACTTAGATGCTTCTGTATAACAAAGACAGAAAGGAACACGCTAGAGTAATGGTGTGGATTATGGGGGAACTTAGCAACCTTGAAGGGCCTAATAATAATGGAAGTGGAAGTCAGTTTGAAATAAAGAACCCTAACAGAAAGGGACAATGGATTCCTTTGTGTCTTTCTAAGGTCGTGGACAACATATTTGAAAAATATAGCAAAAGGACTGTATTTCTTGAATTTTTATGATCCTTTTTCATGTCTCTTCTTTGCTATCTATCTATGTCATTTTAAGCAATACATTTCTTATTAATGATTGGTCTTCTTATTTAATGATAAAGGTTTGATTATTATTTTATTCAACAATTTATCCAATTGCACAAGGAAAATGATCTAATTGTTGTTCCAAGGTTGTCATAATACTATTAATATGGCTATAGTATAAATTTGCGAACACTGGGTTTGTTCCTATCAATTTTCAAGAATGCAATTGACAAAGCTTACTTGCGTGGTTGTTCATGATGATGCACTGGTCCTTTTCTCTCTGACCCATTTTTGTAGTGTATTTCTCCTTTGTCTTTTCGTGGGTTTAGTGTAGATTTCCCAGCTAAATTTCAAGATTGGAAGACCACTGATCCTTTGGATCTTTTTCAAGCTTCAGTAATTAAGACGGAATCAAATCCAAAGGTATGAGTTCTTCTGTTGTTTTGTTTGTACGGCTACTCGCTCATCATGTAGGAAATTGGAGTTGGTAAAAAATTAACGAGGATAAATACTCCACCTTAGTTAACTAAACACATTTTTTTCTTGATAACTAATTTTATTTGGTTGGTCTAGGGGTCAATAGGTCATTAGGGAAATAATAGAGTATGAGTTCAACATATGGTAACCACCTATCTATGATTTAATATCCTATGGGGCTGTTTGTTTGACATATTTAGGTAGTTTTTGGGGTTAAGGAGTTATATTGAGGAGTTATATTAAGTAGTTAAAAATTGAGAGTTGTGTCAAAAACTTGTTTGTATGTAGTTTTTGTGTAGAGGAGTTAGAGTCAAAACCTTGTTTGGATGTAGATTTAAAAACGAGTAATTATTTTTAGTAGTTAAAAAAGAAATGATTAAAAGTGAATGGTTAAAAATGGGTTATTTTGATTGATTTGAAAGGAATGATTAAAAATAAGTTGTTAGAAATGATTGATTAGTTATAAGTGAATGATTAAAAATGAATGGTTAGAAATGAGAGCTATTTTTAAAAGTAAAAATGAGGAGGAATTAATAAAAACTCGTTTGGATGTAGGTTTTCGAGGAGGAGTTGATAAAACCTAATACTAACTCCTACCTAAGTATGTCAAACAAACAGCCCCTATGTTTTTCTATCAACTAAATGTAATAGAGTTTGACAGTTGACCGGTAAGATTAGTCGAGGTGTGCCTAACTGACCTATAAATAAACAAAAAAGATTTATGAAAAAACTCACAAGCTCCTCACTCTAGCAAAAACCTAAATAAAGGAAGACATTATGCAAAGGAGAAAATATATAAAAAAAAACAACATTAAGGAAATAAAACGAGAGATGGATTAATGAGTAACACTTGTAAATGAAAGTACATGAATTTTATGTAATGAATAAAAAGGCAACTTTTACTACTTTAAACTTCCACTGGAAGAGTTTTCTGTAACTATTTGATATGCCCTTATGTAACTTTTCATAAGTTAATGGAAGTCTTTTGTTTCCTAGAAAAAAAAAGAATAAAGAGGCAACCAAGAAAAAGGCACTGTATCATGCACTGTTTTGTTTTTAAAATGGCGTTCAATGTGATTTGTTTAGTTTTATCACATTTCTTGTTAAGAAAATATTAACTACTTTTGTTGGTTCTAAGGCTCACATACGTCAACATTTAAATCGAGAAGCTCGTGGTTGTGATTGTTTGGTTTTATGGTTGGATTGTGATCGCGAAGGTGAAAATATTTGTTTTGAAGGTATTATTCCCCAATGAAATCATTTATTCCTACTTTTTTTTTCTTTTTCTTTGAAGCCATATTTGATCTATTTATTCTTGTTTTGGGTTTGCCTTCATCTCCTTTGGTTCTAAATTTTCCGGGCCTTAAAAGGTTCAGATTCTACACCCTGAGGTGACTTCCATGCATAAATGACAGAATACCAAGTTTTGACTTTTGAGGCAAGAGCAAGCTTCCCTTCATTTAAAGTAGGCCTGGCCGAGCAAGCAATTACTCTAGGAAATCATCATGTTTTGTAGTTTTTTTTTTAATGAAATAAAGGAGAGAACTTGGTGATTACAAGAAAAATCTTCAATTAGAGATGAAAAATGATGAGCTAAAAGAGTCAACGGATAAACATGTTTGCACCAAAGAAAAACATTTGAAAAAACACTATCAATCAAATGATTAAATTTTATTTACATCCTTGAAAACTCTTATGTTCCTTTCCAACCAAAAGCTTACATTATAACATTATGAGCCGTTCATAGCATTCATTTACTTTGTAATTTTATTGCCATCATATATTGTACTATTTCAATAATTACAAAAATAGGTGGGATTTTTAAAAATATTTATTTATTTATTTATTATTATTATTTATTTAGTTTCATTTGATTCATTGTCATATCATATGATATTATTTGTTTATTATCAGGAAAATATTAACATTGGTTCTGGTTGCAGTTATTGACTGCACTGGATTTGGCGGCAACGATTTTAGAAAAAAAGTGTATCGTGCAAGGTTTTCTTCCGTTACTGAAAAAGATATTTTGAAGGCTTTAGATAACCTTGTTCAACCTAATAGAAATGAGGCACTGGCTGTAGATGCTCGACAAGAGATAGATTTGAAAGTTGGAGTAGCGTTTACACGATATCAAACCACCTTTTTTCAGGGAAAATATGGAAACCTTGATTCTCGACTCATCTCGTCAGTTTTCTTCTTGCTCACTCTCTTGAGGCATTTGCATAACATTTACATATACACACATTAATACCAAAAGCTGTATATGAATTCAAAATATAACAGGGGTGAATCATATGTACACATTGTATTAACATATTCGTCACCCATTTATGCATACAATGTGTATGTATGATCGTTATCTATTGTATTCATTTATAGCTTTTGGTGCATTGCTGGAAACATTTTATGCTTCTAAATTCTCACCTCTTTGAGATATCGTTCTAATGTTTCTAGGAATTACTAATAAGTTTGTCTTTCACAATAACATATAAAAAATTAGAAGCTAGAAAGGGATGCTTATTCTTTATTTGCCTTCTATGTATGTTTTCTTGTTTTTCTAATCGATCTAGAAATAAAATCATTGAAATCCATATCTTGTTCTTTATACTGTTTAAGGCTTAATTGAAATAAGATATCATTGTTCTTTATATTGTTGTACAATATCTTTTCATTTTATCAATGAAAGTTTTCTGTTTCCTATTAAAAAATATATATTTTTGTACAATCTGCACTTGCTAATACTTATATTATTCACTTGTTCAGCTATGGTCCATGCCAAACCCCCACACTTGGGTTTTGTGTACAACGGCATTTGCAAATAACTACTTTTAAGCCAGAGAAATATTGGTCTGTGTGCCCTTATATTATGCTAAATGGCTATGAACTTAACCTAGATTGGGAGCGTGGCAAGTTATTCGACTCTGATGTGAGATTTTTTTAGCCTTGATAAACATTCTTAATATCTTCTTTGCAATGCTTACTGTCTTATTATACCTTTTCCCCATGTTTCAGGTTGCTGTAATGTTTGAAAAGCGAGTAACGGAAGATGGAATTGCAGAAGTGACAGAAATAATTGAGAAGCAAGAAACCAAAGCTCGTCCTTCTGGACTAAATACAGTTAACCTTCTGAAGGTATAAATGATTATGAGAATTGTCACCTCGTAAGATTTTGAAAATAAAACAGAGTTTGGAATGACTAGGCCCTGAGGTGGAGCGTGGTTTCCTAGATGACCTACTATTATGACCATTTAAAGTTTTGTAAGAATGTTGGATCAAGTAAGGAGTCTGAGGATTTGAGTCATCTTTTGGAGGTACCGGCTAGAATCTTCAATTACAGTTTGCTTTTTGGAGGTTATCTAGCGTGTGAAGAGACTTTTGTATTTTAATGGAGGAGGTTTGGCCATGTTCTCAGGAGGGGTTTTTGAAAGGATAAATAGAACATTTAAGGGGGTAGAGGTAGGCCTTGGGAGGAGGTTTAGTTTCTTGCTGTTACTTTCTCGCTTTTGACATTTGTGTGTAAAGACTTCTATATTTATTTGCTAAGCCAGTCTTTTGGATTGAAGTCCTTTCTTCTTTTGTTAGTCTAGTTCCTATTTGGCTCCTTTTTTGGGCAGCTTTTTTCACAGGCCTATCATTTGTTGATCCTTTTTCGGCTGGTTCTCATGGGAGATGTTGTCTTTGTTTCTTAGGATTTTTTTTTTAACTCACCTTCATCTTTTTTTAAACAGCTTTTAGCCCTTCTTGAATCCTAGTATTGTTTTTTCTTCTTCTTTCATCGATCATAATATGACCTTAGTTTTTCATTAAAAGATATATTAAAAGAAAAGAGAAGCTGCTTTAATTTGAAATTATGGTTGGAAATAATTTCAATAAATCTGTTTCTTATCCAAAAAAAAAAAATCAATAAATCTTCAATAGAAAATGTTGTGTTGTGATCTTATATTGATTTAAGATATCGTTGTGCCTTATTCAGGTTGCTTCAAGCGCACTAGGGTTTGGACCTCAAATGGCAATGCAGCTAGCTGAACGATTGTATACACAAGGTTACATCAGGTTTTCTTCTTCTTTTTTCCTGAAAATCTGTCCTTTTGGAAACCTTTATTCTTTTACGTTTTATTTTTGGTATGGGGAAAGTTTCATGCACTCTGATTGCAAACAGAGATTAGACTCACAATTATTATTCATTACTCCTTATTTTGCTGCTTTGGACAACTTGGGAAGAAAGAAAAAGAGACACGATGAAATTTCATCCTCACTTTCCCTTTATGGCTCGAAATTAAAAATTTCTTGCTTTCTTCTCATGTTCGTGAAAGCCCTTTCATTTTTATATAAAATGGAAAGGGAAAAATATGTAGGGGGCTCACTGAAGTGTCATTTCAAGTAGCAAAAACAAACAAAGAGAGTGGTAGCAGGCCTCTGTTGGAAGAATTTTTCTAGCTTGTTTATCTTGTTCTTTGGGGGGTTTTTTTTCTCTAAATTTTAAATCACCAATCAACCCAAAAATGTAAGCCAATGAATGTTAATGAATTTAATTATATATCAACACTCCAACACTCTCCTTCACTAGCAGGCATGGAAATTTGTGGAAGGCCCAACAAATGGCAACAAATATTAATTGGGCATGAAACGACTTAAAAAATGGTGAACATAGGACCTCCTACTCTAATACTAGTTAAGTCATCAATCCACCCAAAAGATTAAGCTGGTCGGTTGGTAAATTTAATTATTTGTCAACACTCAAATAATCTATATCATTCTTTCAATCTCATTTCCTTTCTTTTTAGAAAAAGAAAAATATTTCATTCTCCTTATTTGCTCTAAAAAGAAAAGGGAAAAGTTGTCTTCTTTGTTACTGTATCTAGATTCTTCTACACAGGTTGGTGTTATGTCTCTATATCTAGATTCCACCTGCCTGTTGAAGTCTTCAATAAAAGTTTAGTGAATATTCATCCTGTGGAGCACATAATGAAAGATAATGTCCCCATTAAGACATAAAACATCAAAGGAGAAGTTAATGTAGATAAATGCACTTTATATGTATCAAAGATTGGGCAGTGAACCTCAATGTTATCAGAAGTGACAAGAATAAATTTGCAGATATACTTCTGCTTGGTGAATCTTTTTCAATTCTGCTCTTATCTTCTTTGAATAATATGAAGACATTTTATATCTTTTCCTTCAACTCGTTAACATTTTACCACCTTGATATCCTATTTCTTTTCATGTAATCTGAAGACATCTCTTTCTCTATGTTTATATTTTGTTTTTGTTTTCCTTCTTATTGTAGCTATCCACGTACAGAAAGTACAGCATATCCTTCCTCATTTGACTTCAAAGGCACTCTACATTCCTTAGTGAAAAATCCAGAATGGGGCGATTATGTACGGATGCTTCTATCTGATGGATACAGTAAGCCACGGTCAGGAACTGATGCAGGTGATCATCCTCCTATTACTCCAATGTGTTCAGCAACTGAAGATATGCTAGGGAGAGATGCTTGGAGATTGTACCAATATGTGTGCCAGCACTTCATTGGGTCTCTGTCGTCTGATTGCAAATATATTAGGTAAGGTACTCTGTCTTGTTTCTTTCTTTCTTTCTTTATTTTGATTAATTGGATCTCAATTACTGGTCCACAACAATGGTGGAAATAACTATGATCTGTTATAAACTAAAAGTCCTTGAGAATAGGAAAAGAAACTAAATTTGATTGGTGAATTTTTTTGCAACTTGTTTCGTTCTTTTGTGTCTACGTTTTTTAATCATTGATTCACATTTCAAATTGCCGTTAAAGGACAAAGATACAGTTTTCAATTGCTGGAGAAATATTCCATTGTACTGGGTCGCATGTAATGGTAAAAGGGTTCACCTCCATTATGCCATGGTTGGCAGTAAGTGAAAAAAAACTGCCTCAGTTTCTGAAGGGTGAGAAAATAGAAGTTTCAAGAGTCGATCTTTATCAGGTAGCTTCTGAAAACAGTACTAAATTGTTGACAATTTTTGTGCATTTGTGTTATTTCTGTATAAGATTTTGAAATTCTGCTTCTCTCTGATATTCATTTCTATTAGTTATTAATTTAAGGAGTTAATAAAAAAATTGAGCCATGCTCTTGGTTTTATAACGAGAAGTGTAATTAGAGATGGATGGAAAACCACCTGTTAGCTATCATTCGTACTAAAAATTCTGAAATTATTTACCCAAAATTGATTAATGAAAAGAACATATTTCGAGAGTGATTTGCAAATAAACTAATAAAATATGAATCTGAAGATTTAATCTTTACTGAATCAAACTGTTCTCGCCAAGCTAGATGCTTGTCTAGAGAATCCCTCTCATGAATTCAATAACATTTTGTTATGATAAAGATTCTTTGATAGACTTTTTGGAGGAAATTCTCCTCTATCGACCCTTAGGCTACACCACTATAACCGCTGAGTGATGTTATCTCTAGAACCATGATTAGAAACCCACTGTAATTTAAAGGTTCTAAATAGGAGATGCCAGTAATCTAATGTCTAAGGACAATGTAAGAACAAGTGATTTTGGCCCTCATCAGGCATCAAACACAAGTAATGGATATTCCTATTAAGCATCATTTTTCAGAAGTATTAATGATTCGTACTTAATCTCAAAAAAAAGAAAAAATGATTCGTACTTCTTCCTGGTAAACATTTGTCTTCAGTTACAGTACCTTCCTGTTGAATTATTAAGAAATCAAGTATAACGACCGTACTTGAATAGGATCTGTTCTATAGGTTTTACATTTGTATTTAGAAAACAAGTATGTCCAAAGTTTTCAGATGTAGGATATACATTTTCTTTAACATGGATGATCCACATGCATTTGTATCAATGGCATAGACTAATGCTACATTTTGCATCATAATGCTTTTTAAAATTCTCAGGGGAACACCATGCCTCCTGACTATTTAAGTGAGAGTGAGTTGATTTCTCTCATGGAGAAGCATGGAATAGGCACAGATGCATCAATACCTGTACACATTAACAACATTGGGGAGCGCAACTATGTGCAGGTTTGTAATGTTCTGCTATTGATATGACAGTTTGGCATGAAATATATATATATTTTTTCTCCCTGGTTATTTGGCTGCATTGTTACTTTGCAGGTTCAAGCTGGGAGGAAGTTAGTTCCAACTAACTTGGGCATCACCTTAATCAGAGGTTATCAATGTATTGATCCGGATCTCTGTTTACCAGATATTCGTAGTTTTATCGAGCAACAGATCACTCTTGTTGCCAAGGGTCAAGTAGAACATTTTAGTGTTGTGCAGAATGTACTGCAACAGTTCAAGCAAAAGTATAGCTACTTCGTTAAGAAGGTTATTTTCCACTGTGCATGTTTACTTTCTAGTACATGTTATCAAAGAAGCATTAGAGGCTTTCCGTTCTTTTGTTTTTCTTCTAGTTCTAAATAAAGTAAATCTCTTGACTTCTACTTATTTCCACCTACAAAAATTCGGTTGGAGATTGAGAGACGAGATTATATGTCTATTTTAATTGCCAACAAAAATTTGGTTGGATATTGAGAGACAAGATTTTTCTCTCTCCGATTTTTTAGGATAGGGGAGAAGATTTCCTATTTCGTGGAATGGATTCATGGAATAAAATTACTAAACTATGCTAACACATTTGGGTTGGAGAAGGAATCGATCTTTATCTTTGTGGTTCCCTGATCTTTTTGCGAAAAAAAAAATCTGTGGTGTTGGAAGGATAATTTAAGTCTTTGTTTGTATGCTTGAATGAGTGAAGAAGGCTAATTAAAAAAAATCTAGGGATGGAAATTACTCATTCCAAGTGATAGATCCATCCTCTTATGAGAGGGTTTCCTTTACTCTAGTTTTTAAGCTGTCTTTTCTGTTATGATGTCTATTTTGAATCTTTAACCGGCACTAATAATTGAGGCCACATCAGATGAAGTTTCCTCTTCTATTATTCTAATGCATAGTATCTGGAACCAGGCTTATTTACTTCTCCATCGTTGCAATTCAACTTTTCAATTAGCTTCTTATTTTGTTCAGATTGATCATATGGATGCTCTGTTTGAAGCACAATTTTCTCCTCTTGCCGACTCGGGACGTGCTTTGAGCAAATGTGGCAAATGCCTGCGGTATATGAAGTTTATTTCTTCCCAACCGCAGCGCCTGTACTGTGGTATATGTGAAGAGGTTTATTATCTTCCTCAAAAGGGAGCAATCAAGGTAAATATCCCACAAAATAGTGCCATTACTTTCCAGTGATTACACAAACTCTTGAGCTTCCTTGTTTCACCCTTTATGCATAGTCTGTGGAGGATATTTTCTTAATCATTTTCTCAAAGTACATGATAACTGCAGCACTGTCTGAATTACCTTTGGCTGACTTTTAGTAGTATTTCATATATATTGTCTATTTTACATGCATTTTTTGGAATATAAGCATTTGCAATGGTTGTTGCATGCCTTCAACTTCATTTTGTACAGTTTCTCTCTCTTCTTTTGATACGTGTCAATTTACGTTTAACTTGACTACTCTCACGAGACAATTTGACTTACCTTACAATATTAATTTTTACGTAGGAGGTCACCATAAATTGAACCCATAATCTTTTGGTTCTCTAGGCCCTCTTGACAACTAGGGTCGATGGTATTGTATATATTTTCTTTTCTGGTAGCTCTGTTTAGGAAGGATTCACCTTTATTTAATTAGCATCATGATTCCTAATTTTGTTTTAATTGCAACTGAAAATTCATTTCATATATTACTGTTAAGTGTTATCATTGATGGCTAGTACTCTTAAATATTTTGTGAAACTGACGTTAATGACTTGTGGAATGAATGCTTTTAAGATTTGCTTAGTGGACTATAAGACCTCTCTGATTATCCTCAGATTTTTTCTTTTAATGTACTTTTCAACAAATACCTCATTGTTCTTTTTTCAGCTGTACAAGGAACTCACGTGCCCTTTGGATAACTTCGAGCTCTTGCTTTTTTCCTTGCCCGGCCCAGAAGGCAAGTCATTTCCCCTTTGCCCATACTGCTACAATAGTCCTCCATTCGAGGGAATTGACTCATTATATGGTGCTTCTAAAACCGCCCCGGGTTCCGGAGCATCGAGCAAGGGAATAGGCATGCCATGCTTCCTGTGCCCGCACCCAACATGTCGACATTCTTTAATAACCCAAGGAGTTTGTGCTTGCCCGGAATGTAGCGGGACGCTTGTCCTAGATCCAGTGGGTGCACCCAACTGGAAACTTAACTGCAACAAGTGCAATTGTATTGTCTTCCTTCCTAAGGGCGCTCATAGGATTTCCACCACAAAAGAGAAGTGCACCGAATGCGACTCTACGATAATAGAAGTGGACTTCAACAAGAAAACTACACCATTGGAGGATGGAGCTACATTGTTTGTTGGTTGCATTCTTTGCGATGAGTTTCTCCATTCACTTCTGGAGATGAAGCATGGAAAATCATTTTTCAGAGGTAGAGGTTCGCGAGGAAGAGGGCAGGGAAGAGGAAGGGGAAGGGGAGGAAGAGGACGCGGTTCAGGAAAATCGATGGACCCGAAAATGAGTTTCCGAGATTTCTGAAGAAAGGCTAGGACCATCTTTCAGATGTTTAAGAGGAAAAGAGGAAGCACAATTTTGGTAGAGAACACCAAGATGAGCCACCAATGCCCTTATCTTATACATAATTCATCTTACCTTAGATGGTGCTAGCTCGTTTCTTTGGTTGGAATGTTCTGCAGAGCAGCCTTTTGTTTTTTTAATTTTATTTTCCTTGTATGGTCAAGATTTACTTTTAACACGTTTGTAGTTTCGGAAATTTTTGTGTGGTCCGATTGGTTTGCACCACATTAGTATGTAGTTCAACAATCTAGGGTGATTCGAACATTTAATTTTTCGGTTGAGAAGGTTATCCAATTACACATTAAGTTGGCGAAAATGAATAGTTATAATGTAGTTGTTTGTAA

mRNA sequence

ATTTTTTCTTCTCCTCGTTCATCGCGTCCATGTTTATTCGCACTTGAGCTCGAAGCTTTTGCCCAGCGATTGCGAAGTTTCAGTCGCCGTTGAGAAGAAGAATCCTCAATTCACTCAGAAATTCGCCGGATTCTGCCGTGTAAGCTCCGGCGACAGTCGTCATCATGGTGGCTTCATCGGTTCTCATGGTGGCGGAGAAGCCGAGCATTGCGCTCTCGATTGCTTCGGCTCTCTCTCATGGCCAAATGTCTACAAGAAAGGGTAGCACAGATGTACATGAATTTGATGGGAAATTTCTTGGGCTTCATGCCCATTATAAAGTGACATCGGCGATCGGACATATTTTCAGTGTAGATTTCCCAGCTAAATTTCAAGATTGGAAGACCACTGATCCTTTGGATCTTTTTCAAGCTTCAGTAATTAAGACGGAATCAAATCCAAAGGCTCACATACGTCAACATTTAAATCGAGAAGCTCGTGGTTGTGATTGTTTGGTTTTATGGTTGGATTGTGATCGCGAAGGTGAAAATATTTGTTTTGAAGTTATTGACTGCACTGGATTTGGCGGCAACGATTTTAGAAAAAAAGTGTATCGTGCAAGGTTTTCTTCCGTTACTGAAAAAGATATTTTGAAGGCTTTAGATAACCTTGTTCAACCTAATAGAAATGAGGCACTGGCTGTAGATGCTCGACAAGAGATAGATTTGAAAGTTGGAGTAGCGTTTACACGATATCAAACCACCTTTTTTCAGGGAAAATATGGAAACCTTGATTCTCGACTCATCTCCTATGGTCCATGCCAAACCCCCACACTTGGGTTTTGTGTACAACGGCATTTGCAAATAACTACTTTTAAGCCAGAGAAATATTGGTCTGTGTGCCCTTATATTATGCTAAATGGCTATGAACTTAACCTAGATTGGGAGCGTGGCAAGTTATTCGACTCTGATGTTGCTGTAATGTTTGAAAAGCGAGTAACGGAAGATGGAATTGCAGAAGTGACAGAAATAATTGAGAAGCAAGAAACCAAAGCTCGTCCTTCTGGACTAAATACAGTTAACCTTCTGAAGGTTGCTTCAAGCGCACTAGGGTTTGGACCTCAAATGGCAATGCAGCTAGCTGAACGATTGTATACACAAGGTTACATCAGCTATCCACGTACAGAAAGTACAGCATATCCTTCCTCATTTGACTTCAAAGGCACTCTACATTCCTTAGTGAAAAATCCAGAATGGGGCGATTATGTACGGATGCTTCTATCTGATGGATACAGTAAGCCACGGTCAGGAACTGATGCAGGTGATCATCCTCCTATTACTCCAATGTGTTCAGCAACTGAAGATATGCTAGGGAGAGATGCTTGGAGATTGTACCAATATGTGTGCCAGCACTTCATTGGGTCTCTGTCGTCTGATTGCAAATATATTAGGACAAAGATACAGTTTTCAATTGCTGGAGAAATATTCCATTGTACTGGGTCGCATGTAATGGTAAAAGGGTTCACCTCCATTATGCCATGGTTGGCAGTAAGTGAAAAAAAACTGCCTCAGTTTCTGAAGGGTGAGAAAATAGAAGTTTCAAGAGTCGATCTTTATCAGGGGAACACCATGCCTCCTGACTATTTAAGTGAGAGTGAGTTGATTTCTCTCATGGAGAAGCATGGAATAGGCACAGATGCATCAATACCTGTACACATTAACAACATTGGGGAGCGCAACTATGTGCAGGTTCAAGCTGGGAGGAAGTTAGTTCCAACTAACTTGGGCATCACCTTAATCAGAGGTTATCAATGTATTGATCCGGATCTCTGTTTACCAGATATTCGTAGTTTTATCGAGCAACAGATCACTCTTGTTGCCAAGGGTCAAGTAGAACATTTTAGTGTTGTGCAGAATGTACTGCAACAGTTCAAGCAAAAGTATAGCTACTTCGTTAAGAAGATTGATCATATGGATGCTCTGTTTGAAGCACAATTTTCTCCTCTTGCCGACTCGGGACGTGCTTTGAGCAAATGTGGCAAATGCCTGCGGTATATGAAGTTTATTTCTTCCCAACCGCAGCGCCTGTACTGTGGTATATGTGAAGAGGTTTATTATCTTCCTCAAAAGGGAGCAATCAAGCTGTACAAGGAACTCACGTGCCCTTTGGATAACTTCGAGCTCTTGCTTTTTTCCTTGCCCGGCCCAGAAGGCAAGTCATTTCCCCTTTGCCCATACTGCTACAATAGTCCTCCATTCGAGGGAATTGACTCATTATATGGTGCTTCTAAAACCGCCCCGGGTTCCGGAGCATCGAGCAAGGGAATAGGCATGCCATGCTTCCTGTGCCCGCACCCAACATGTCGACATTCTTTAATAACCCAAGGAGTTTGTGCTTGCCCGGAATGTAGCGGGACGCTTGTCCTAGATCCAGTGGGTGCACCCAACTGGAAACTTAACTGCAACAAGTGCAATTGTATTGTCTTCCTTCCTAAGGGCGCTCATAGGATTTCCACCACAAAAGAGAAGTGCACCGAATGCGACTCTACGATAATAGAAGTGGACTTCAACAAGAAAACTACACCATTGGAGGATGGAGCTACATTGTTTGTTGGTTGCATTCTTTGCGATGAGTTTCTCCATTCACTTCTGGAGATGAAGCATGGAAAATCATTTTTCAGAGGTAGAGGTTCGCGAGGAAGAGGGCAGGGAAGAGGAAGGGGAAGGGGAGGAAGAGGACGCGGTTCAGGAAAATCGATGGACCCGAAAATGAGTTTCCGAGATTTCTGAAGAAAGGCTAGGACCATCTTTCAGATGTTTAAGAGGAAAAGAGGAAGCACAATTTTGGTAGAGAACACCAAGATGAGCCACCAATGCCCTTATCTTATACATAATTCATCTTACCTTAGATGGTGCTAGCTCGTTTCTTTGGTTGGAATGTTCTGCAGAGCAGCCTTTTGTTTTTTTAATTTTATTTTCCTTGTATGGTCAAGATTTACTTTTAACACGTTTGTAGTTTCGGAAATTTTTGTGTGGTCCGATTGGTTTGCACCACATTAGTATGTAGTTCAACAATCTAGGGTGATTCGAACATTTAATTTTTCGGTTGAGAAGGTTATCCAATTACACATTAAGTTGGCGAAAATGAATAGTTATAATGTAGTTGTTTGTAA

Coding sequence (CDS)

ATGGTGGCTTCATCGGTTCTCATGGTGGCGGAGAAGCCGAGCATTGCGCTCTCGATTGCTTCGGCTCTCTCTCATGGCCAAATGTCTACAAGAAAGGGTAGCACAGATGTACATGAATTTGATGGGAAATTTCTTGGGCTTCATGCCCATTATAAAGTGACATCGGCGATCGGACATATTTTCAGTGTAGATTTCCCAGCTAAATTTCAAGATTGGAAGACCACTGATCCTTTGGATCTTTTTCAAGCTTCAGTAATTAAGACGGAATCAAATCCAAAGGCTCACATACGTCAACATTTAAATCGAGAAGCTCGTGGTTGTGATTGTTTGGTTTTATGGTTGGATTGTGATCGCGAAGGTGAAAATATTTGTTTTGAAGTTATTGACTGCACTGGATTTGGCGGCAACGATTTTAGAAAAAAAGTGTATCGTGCAAGGTTTTCTTCCGTTACTGAAAAAGATATTTTGAAGGCTTTAGATAACCTTGTTCAACCTAATAGAAATGAGGCACTGGCTGTAGATGCTCGACAAGAGATAGATTTGAAAGTTGGAGTAGCGTTTACACGATATCAAACCACCTTTTTTCAGGGAAAATATGGAAACCTTGATTCTCGACTCATCTCCTATGGTCCATGCCAAACCCCCACACTTGGGTTTTGTGTACAACGGCATTTGCAAATAACTACTTTTAAGCCAGAGAAATATTGGTCTGTGTGCCCTTATATTATGCTAAATGGCTATGAACTTAACCTAGATTGGGAGCGTGGCAAGTTATTCGACTCTGATGTTGCTGTAATGTTTGAAAAGCGAGTAACGGAAGATGGAATTGCAGAAGTGACAGAAATAATTGAGAAGCAAGAAACCAAAGCTCGTCCTTCTGGACTAAATACAGTTAACCTTCTGAAGGTTGCTTCAAGCGCACTAGGGTTTGGACCTCAAATGGCAATGCAGCTAGCTGAACGATTGTATACACAAGGTTACATCAGCTATCCACGTACAGAAAGTACAGCATATCCTTCCTCATTTGACTTCAAAGGCACTCTACATTCCTTAGTGAAAAATCCAGAATGGGGCGATTATGTACGGATGCTTCTATCTGATGGATACAGTAAGCCACGGTCAGGAACTGATGCAGGTGATCATCCTCCTATTACTCCAATGTGTTCAGCAACTGAAGATATGCTAGGGAGAGATGCTTGGAGATTGTACCAATATGTGTGCCAGCACTTCATTGGGTCTCTGTCGTCTGATTGCAAATATATTAGGACAAAGATACAGTTTTCAATTGCTGGAGAAATATTCCATTGTACTGGGTCGCATGTAATGGTAAAAGGGTTCACCTCCATTATGCCATGGTTGGCAGTAAGTGAAAAAAAACTGCCTCAGTTTCTGAAGGGTGAGAAAATAGAAGTTTCAAGAGTCGATCTTTATCAGGGGAACACCATGCCTCCTGACTATTTAAGTGAGAGTGAGTTGATTTCTCTCATGGAGAAGCATGGAATAGGCACAGATGCATCAATACCTGTACACATTAACAACATTGGGGAGCGCAACTATGTGCAGGTTCAAGCTGGGAGGAAGTTAGTTCCAACTAACTTGGGCATCACCTTAATCAGAGGTTATCAATGTATTGATCCGGATCTCTGTTTACCAGATATTCGTAGTTTTATCGAGCAACAGATCACTCTTGTTGCCAAGGGTCAAGTAGAACATTTTAGTGTTGTGCAGAATGTACTGCAACAGTTCAAGCAAAAGTATAGCTACTTCGTTAAGAAGATTGATCATATGGATGCTCTGTTTGAAGCACAATTTTCTCCTCTTGCCGACTCGGGACGTGCTTTGAGCAAATGTGGCAAATGCCTGCGGTATATGAAGTTTATTTCTTCCCAACCGCAGCGCCTGTACTGTGGTATATGTGAAGAGGTTTATTATCTTCCTCAAAAGGGAGCAATCAAGCTGTACAAGGAACTCACGTGCCCTTTGGATAACTTCGAGCTCTTGCTTTTTTCCTTGCCCGGCCCAGAAGGCAAGTCATTTCCCCTTTGCCCATACTGCTACAATAGTCCTCCATTCGAGGGAATTGACTCATTATATGGTGCTTCTAAAACCGCCCCGGGTTCCGGAGCATCGAGCAAGGGAATAGGCATGCCATGCTTCCTGTGCCCGCACCCAACATGTCGACATTCTTTAATAACCCAAGGAGTTTGTGCTTGCCCGGAATGTAGCGGGACGCTTGTCCTAGATCCAGTGGGTGCACCCAACTGGAAACTTAACTGCAACAAGTGCAATTGTATTGTCTTCCTTCCTAAGGGCGCTCATAGGATTTCCACCACAAAAGAGAAGTGCACCGAATGCGACTCTACGATAATAGAAGTGGACTTCAACAAGAAAACTACACCATTGGAGGATGGAGCTACATTGTTTGTTGGTTGCATTCTTTGCGATGAGTTTCTCCATTCACTTCTGGAGATGAAGCATGGAAAATCATTTTTCAGAGGTAGAGGTTCGCGAGGAAGAGGGCAGGGAAGAGGAAGGGGAAGGGGAGGAAGAGGACGCGGTTCAGGAAAATCGATGGACCCGAAAATGAGTTTCCGAGATTTCTGA

Protein sequence

MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHIFSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREGENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEIDLKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCPYIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDYVRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCPLDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFLCPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKEKCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRGQGRGRGRGGRGRGSGKSMDPKMSFRDF

Homology

[Close]

BLAST of Sed0005840 vs. NCBI nr
Match: XP_023528530.1 (DNA topoisomerase 3-beta isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1689.1 bits (4373), Expect = 0.0e+00
Identity = 806/868 (92.86%), Postives = 842/868 (97.00%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIK ESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKAESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGND+RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNDYRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           IRTKIQFSIAGEIF+CTGS VMVKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 IRTKIQFSIAGEIFNCTGSSVMVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDTLYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRG-GRGRGSGKSMDPKMSFRDF 868
           +GRGRGRG GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGRGRGRGRSSGKLMDPKMSFRDF 868

[Close]

BLAST of Sed0005840 vs. NCBI nr
Match: KAG6582102.1 (DNA topoisomerase 3-beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018517.1 DNA topoisomerase 3-beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1687.2 bits (4368), Expect = 0.0e+00
Identity = 804/867 (92.73%), Postives = 842/867 (97.12%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN++RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNEYRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           +RTKIQFSIAGEIF+CTGS VMVKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 LRTKIQFSIAGEIFNCTGSSVMVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDTLYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGR GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGR-GRGRSSGKLMDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. NCBI nr
Match: XP_022955609.1 (DNA topoisomerase 3-beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 1685.6 bits (4364), Expect = 0.0e+00
Identity = 803/867 (92.62%), Postives = 842/867 (97.12%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN++RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNEYRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VR+LLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRVLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           +RTKIQFSIAGEIF+CTGS VMVKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 LRTKIQFSIAGEIFNCTGSSVMVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDTLYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGR GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGR-GRGRSSGKLMDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. NCBI nr
Match: XP_022979706.1 (DNA topoisomerase 3-beta isoform X1 [Cucurbita maxima])

HSP 1 Score: 1684.5 bits (4361), Expect = 0.0e+00
Identity = 804/867 (92.73%), Postives = 841/867 (97.00%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN+ RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNENRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           IRTKIQFSIAGEIF+CTGS V+VKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 IRTKIQFSIAGEIFNCTGSSVLVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDALYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGR GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGR-GRGRSSGKLMDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. NCBI nr
Match: XP_022137893.1 (DNA topoisomerase 3-beta isoform X1 [Momordica charantia])

HSP 1 Score: 1682.5 bits (4356), Expect = 0.0e+00
Identity = 802/867 (92.50%), Postives = 836/867 (96.42%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVAS+VLMVAEKPSIALSIASALSHGQMSTRKGSTD+HEFDG+FLGLHAHYKVTS IGHI
Sbjct: 1   MVASTVLMVAEKPSIALSIASALSHGQMSTRKGSTDIHEFDGRFLGLHAHYKVTSVIGHI 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFP +FQ+W TTDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPDRFQNWTTTDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN+FRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNEFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGVAFTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERGKLFD DVAVMF+KRVTEDGI EVTEI EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGKLFDCDVAVMFQKRVTEDGIVEVTEISEKQESKHRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALGFGPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSL+KNPEWGDY
Sbjct: 301 LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLLKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VR+LLSDGYSKPRSGTDAGDHPP+TPMC ATEDMLGRDAWRLYQYVCQHFIGSLS DCKY
Sbjct: 361 VRVLLSDGYSKPRSGTDAGDHPPVTPMCLATEDMLGRDAWRLYQYVCQHFIGSLSPDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
            RTKIQFSIAGEIFHCTG HVM KGFTSIMPWLAV+EKKLPQFLKGEKIEV+RVDLYQGN
Sbjct: 421 TRTKIQFSIAGEIFHCTGVHVMAKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPT LGITLIRG
Sbjct: 481 TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTALGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDL LPDIRSFIEQQITLVAKGQV+HFSVVQN LQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLGLPDIRSFIEQQITLVAKGQVDHFSVVQNALQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLADSGR+ SKCGKCLRYMKFISSQPQR+YC  CEEVYYLPQKG IKLYKELTCP
Sbjct: 601 EAQFSPLADSGRSFSKCGKCLRYMKFISSQPQRMYCNTCEEVYYLPQKGTIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT   SG S+KGIGMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDALYGAAKTTQSSGKSTKGIGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPV APNW+LNCNKCN +VFLP+GAHRISTT +
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWRLNCNKCNFLVFLPQGAHRISTTND 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDS IIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGR 
Sbjct: 781 KCDECDSKIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRS 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGRGGRGRG+G+SMDPKMSFRDF
Sbjct: 841 RGRGRGRGGRGRGAGRSMDPKMSFRDF 867

[Close]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot
Match: F4ISQ7 (DNA topoisomerase 3-beta OS=Arabidopsis thaliana OX=3702 GN=At2g32000 PE=2 SV=1)

HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 659/862 (76.45%), Postives = 749/862 (86.89%), Query Frame = 0


Query: 6   VLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHIFSVDF 65
           VLMVAEKPSIALSIAS LSHGQMSTR+GST+VHEFDG F G  AHY+VTS IGH+FSVDF
Sbjct: 7   VLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDF 66

Query: 66  PAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREGENICF 125
           P K+Q+W T DP DLF A +IK ESNPKAHI +HL+ EARGC  +VLWLDCDREGENICF
Sbjct: 67  PEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENICF 126

Query: 126 EVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEIDLKVGV 185
           EVI+ TGF   D ++KVYRARFSSVTEKDI KA+DNLV+PNR+EALAVDARQEIDLKVGV
Sbjct: 127 EVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVGV 186

Query: 186 AFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCPYIMLN 245
           AF+R+QT++FQGKY NLD R+ISYGPCQTPTLGFCVQR++ I TFKPEK+W++ PYI  +
Sbjct: 187 AFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRKD 246

Query: 246 GYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNLLKVAS 305
           GYEL L+WER +LFD + A +F+K V E   A+V ++ EKQE K RP+GLNTVNLLKVAS
Sbjct: 247 GYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLLKVAS 306

Query: 306 SALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDYVRMLL 365
           SALGFGPQ AM LAERLYTQG+ISYPRTESTAYPSSFDF  TL + V NP WG YV+ LL
Sbjct: 307 SALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLL 366

Query: 366 SDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKI 425
           SDG+  P+SGTDAGDHPPITPM +ATE M+G DAWRLYQYVCQHF+G++S +CKYIRTK+
Sbjct: 367 SDGFHMPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCKYIRTKV 426

Query: 426 QFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGNTMPPD 485
           + SI GE FHCTG  V  KGFT+IMPW AV EKKLP FLKGE+IEV RV+LY+GNT PPD
Sbjct: 427 ELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPPD 486

Query: 486 YLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRGYQCID 545
           YL+ESELISLMEKHGIGTDASI VHINNIGERNYVQVQ+GRK+VPT LGITLIRGYQCID
Sbjct: 487 YLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCID 546

Query: 546 PDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALFEAQFS 605
           PDLCLPDIRSFIEQQITLVAKGQ +H  VVQ+V+QQF++K+SYFV++I+HMDALFEAQFS
Sbjct: 547 PDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFS 606

Query: 606 PLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCPLDNFE 665
           PLADSGRALSKCGKCLRYMK I++ P RL+CG CEEVYYLPQKG +KLYKELTCPLDNFE
Sbjct: 607 PLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFE 666

Query: 666 LLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFLCPHPT 725
           L+++S+PGPEGKSFPLCPYCYNSPPFEGID+L+GASKT      +  G GMPC LCPHPT
Sbjct: 667 LVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPT 726

Query: 726 CRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKEKCTEC 785
           C+HS+  QGVCACPEC GTLVLDPV  P WKLNCN C+CIV LP+GAHRI+TT  +C EC
Sbjct: 727 CQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPEC 786

Query: 786 DSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRGQGRGR 845
           DS IIE+DFNKKTTPLE+GATL  GC+LCDE L SL+E+KHG+SF R RG RGRG+GRGR
Sbjct: 787 DSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVR-RGGRGRGRGRGR 846

Query: 846 GRGGRGRGSGKSMDPKMSFRDF 868
           GRGGR RGS KS+DPKMSFRDF
Sbjct: 847 GRGGR-RGS-KSVDPKMSFRDF 865

[Close]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot
Match: Q0J0S6 (DNA topoisomerase 3-beta OS=Oryza sativa subsp. japonica OX=39947 GN=TOP3B PE=2 SV=1)

HSP 1 Score: 1330.1 bits (3441), Expect = 0.0e+00
Identity = 634/868 (73.04%), Postives = 734/868 (84.56%), Query Frame = 0


Query: 2   VASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHIF 61
           +A +VLMVAEKPSIALSIASALS G+MSTRKGSTDVHEFDG F G HA +KVTS IGH+ 
Sbjct: 1   MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVL 60

Query: 62  SVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREGE 121
           SVDFP  +Q+W+ TDP+DLF A V+++E NPKAHIR+HL +EARGC  LVLWLDCDREGE
Sbjct: 61  SVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGE 120

Query: 122 NICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEIDL 181
           NIC+EVIDCTG   ++  ++++RA+FSSVTEKDI+ A++NLV P+++EALAVDARQEIDL
Sbjct: 121 NICYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEIDL 180

Query: 182 KVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCPY 241
           KVGVAFTR+QT +FQGKYGNLDSR+ISYGPCQTPTLGFCVQR+ QITTFKPEK+WS+  Y
Sbjct: 181 KVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTY 240

Query: 242 IMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNLL 301
           ++ +G E+ L+W+R KLFD DV VMF+K V  DGI +VT+I  K+E KARP GLNTVNLL
Sbjct: 241 VIKDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGILKVTDISVKEECKARPPGLNTVNLL 300

Query: 302 KVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDYV 361
           KVASSALG GPQ AM LAERLYTQG+ISYPRTESTAYPSSFDF+  L +L  NP W + V
Sbjct: 301 KVASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSNDV 360

Query: 362 RMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYI 421
           R LL  G+ KP+ G DAGDHPPITPM  ATE+ LG DAWRLYQY+CQHFIG++S DC+Y 
Sbjct: 361 RTLLDTGFVKPKQGHDAGDHPPITPMRLATEEALGTDAWRLYQYICQHFIGTVSPDCRYT 420

Query: 422 RTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGNT 481
           RT I+F+  GE FHC G+ V  KGFTSIMPWLAVSE  +P + KG+ + + +VD+Y+G+T
Sbjct: 421 RTSIEFTSGGETFHCVGNRVTSKGFTSIMPWLAVSENNIPAYKKGDAVSIHKVDIYEGST 480

Query: 482 MPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRGY 541
            PPDYLSESELISLMEK+GIGTDASIPVH+NNI ERNYVQV +GR+LVPT LG TLIRGY
Sbjct: 481 TPPDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTLIRGY 540

Query: 542 QCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALFE 601
           QCID DLCLPDIR FIEQQITL+AKG+ +H  VVQ+VLQQF +KYSYFVKKI++MDALFE
Sbjct: 541 QCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMDALFE 600

Query: 602 AQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCPL 661
           AQFSPLADSGR LSKCGKC RYMK+IS+QP RLYC  CEEVYYLPQ G+IKLYKE+ CPL
Sbjct: 601 AQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPL 660

Query: 662 DNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFLC 721
           D FELLLFS+ GP+ KSFPLCP+CYNSPPFEGID L+GA K    +G   KG GMPCFLC
Sbjct: 661 DGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALK-LDDTGKVGKGAGMPCFLC 720

Query: 722 PHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKEK 781
            HPTC+ S+ITQGVCACPEC+GTL+LDPV AP W+L CN+CNCIV LP  AH+ISTT +K
Sbjct: 721 LHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTTDKK 780

Query: 782 CTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRGQ 841
           C  C+STIIEVDFNKKTTPL+DGATL  GCILCDE LHSL+EMKHGKSFF  RG RGRG+
Sbjct: 781 CPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRG-RGRGR 840

Query: 842 GRGRGRG-GRG-RGSGKSMDPKMSFRDF 868
           GRGRGRG  RG RGS +  DPKMSFRDF
Sbjct: 841 GRGRGRGSSRGRRGSSRHDDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot
Match: Q9Z321 (DNA topoisomerase 3-beta-1 OS=Mus musculus OX=10090 GN=Top3b PE=1 SV=1)

HSP 1 Score: 913.3 bits (2359), Expect = 2.1e-264
Identity = 457/868 (52.65%), Postives = 585/868 (67.40%), Query Frame = 0


Query: 5   SVLMVAEKPSIALSIASALSHGQMSTRK---GSTDVHEFDGKFLGLHAHYKVTSAIGHIF 64
           +VLMVAEKPS+A SIA  LS G MS+ K   G+  VH++ G F G   H+K+TS  GH+ 
Sbjct: 3   TVLMVAEKPSLAQSIAKILSRGNMSSHKGLNGACSVHKYTGTFAGQPVHFKMTSVCGHVM 62

Query: 65  SVDFPAKFQDWKTTDPLDLF-QASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 124
           ++DF  K+  W   DP +LF QA   K E+NPK ++ + L  E RGCD +VLWLDCD+EG
Sbjct: 63  TLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYVVLWLDCDKEG 122

Query: 125 ENICFEVIDC---TGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQ 184
           ENICFEV+D         ++  K V+RARFSS+T+ DI  A+  L +P+ NEAL+VDARQ
Sbjct: 123 ENICFEVLDAVLPVMNNAHNGEKTVFRARFSSITDTDICNAMTRLSEPDHNEALSVDARQ 182

Query: 185 EIDLKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWS 244
           E+DL++G AFTR+QT +FQGKYG+LDS LIS+GPCQTPTLGFCV+RH +I +FKPE YW 
Sbjct: 183 ELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWV 242

Query: 245 VCPYIMLNGYE-LNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLN 304
           +   +  +  E L LDW+R ++FD ++A MF      +  A V     K++ K RP  LN
Sbjct: 243 LQAKVHTDKEESLLLDWDRVRVFDWEIAQMFLNMTKLEKEAWVEATSRKEKAKQRPLALN 302

Query: 305 TVNLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPE 364
           TV +L+VASSALG GPQ AMQ+AERLYTQGYISYPRTE+T YP +FD KG+L     +P 
Sbjct: 303 TVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANHPY 362

Query: 365 WGDYVRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSS 424
           W D V+ LL++G ++PR G DAGDHPPITPM SATE  LG DAWRLY+Y+ +HFI ++S 
Sbjct: 363 WADSVKQLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGDAWRLYEYITRHFIATVSH 422

Query: 425 DCKYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVS-EKKLPQFLKGEKIEVSRVD 484
           DCKY+++ I F I  E F C G  V+  GFT IMPW +V  E+ LP   KG+   V  V 
Sbjct: 423 DCKYLQSTISFRIGPEHFTCMGKTVISPGFTEIMPWQSVPLEESLPTCQKGDTFTVGEVK 482

Query: 485 LYQGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGI 544
           + +  T PPDYL+E+ELI+LMEKHGIGTDASIPVHINNI +RNYV V++GR+L PTNLGI
Sbjct: 483 MLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGI 542

Query: 545 TLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDH 604
            L+ GY  ID +L LP IRS +E+Q+ L+A+G+ ++  V+ + L  FK+K+ YFV  I  
Sbjct: 543 VLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYHQVLGHTLDIFKRKFHYFVDSIAG 602

Query: 605 MDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYK 664
           MD L E  FSPLA +G+ LS+CGKC R+MK+I ++P RL+C  C+E Y LPQ G IKLYK
Sbjct: 603 MDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKLYK 662

Query: 665 ELTCPLDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIG 724
           EL CPLD+FEL+L+S  G  GKS+PLCPYCYN PPF  +                    G
Sbjct: 663 ELRCPLDDFELVLWS-SGSRGKSYPLCPYCYNHPPFRDMKK------------------G 722

Query: 725 MPCFLCPHPTCRHSLITQGVCACPEC-SGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHR 784
           M C  C HPTC+HSL   G+  C EC +G LVLDP   P WK+ CN CN +    + AHR
Sbjct: 723 MGCNECTHPTCQHSLSMLGIGQCVECENGVLVLDPTSGPKWKVACNTCNVVAHCFENAHR 782

Query: 785 ISTTKEKCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFF-RG 844
           +  + + C  C++ +++VDFNK  +PL    T   GCI CD     L+E+KH  S     
Sbjct: 783 VRVSADTCNTCEAALLDVDFNKAKSPLPGNETQHTGCIFCDPVFQELVELKHAASCHPMH 842

Query: 845 RGSRGRGQGRGRGRGGRGRGSGKSMDPK 862
           RG  GR QGRGRGRG R  G      PK
Sbjct: 843 RGGPGRRQGRGRGRGRRPPGKPNPRRPK 851

[Close]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot
Match: O95985 (DNA topoisomerase 3-beta-1 OS=Homo sapiens OX=9606 GN=TOP3B PE=1 SV=1)

HSP 1 Score: 907.9 bits (2345), Expect = 8.7e-263
Identity = 453/871 (52.01%), Postives = 587/871 (67.39%), Query Frame = 0


Query: 5   SVLMVAEKPSIALSIASALSHGQMSTRK---GSTDVHEFDGKFLGLHAHYKVTSAIGHIF 64
           +VLMVAEKPS+A SIA  LS G +S+ K   G+  VHE+ G F G    +K+TS  GH+ 
Sbjct: 3   TVLMVAEKPSLAQSIAKILSRGSLSSHKGLNGACSVHEYTGTFAGQPVRFKMTSVCGHVM 62

Query: 65  SVDFPAKFQDWKTTDPLDLF-QASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 124
           ++DF  K+  W   DP +LF QA   K E+NPK ++ + L  E RGCD +VLWLDCD+EG
Sbjct: 63  TLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYIVLWLDCDKEG 122

Query: 125 ENICFEVIDCT------GFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVD 184
           ENICFEV+D          GG    K V+RARFSS+T+ DI  A+  L +P+ NEAL+VD
Sbjct: 123 ENICFEVLDAVLPVMNKAHGG---EKTVFRARFSSITDTDICNAMACLGEPDHNEALSVD 182

Query: 185 ARQEIDLKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK 244
           ARQE+DL++G AFTR+QT +FQGKYG+LDS LIS+GPCQTPTLGFCV+RH +I +FKPE 
Sbjct: 183 ARQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPET 242

Query: 245 YWSVCPYIMLN-GYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPS 304
           YW +   +  +    L LDW+R ++FD ++A MF      +  A+V     K++ K RP 
Sbjct: 243 YWVLQAKVNTDKDRSLLLDWDRVRVFDREIAQMFLNMTKLEKEAQVEATSRKEKAKQRPL 302

Query: 305 GLNTVNLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVK 364
            LNTV +L+VASS+LG GPQ AMQ AERLYTQGYISYPRTE+T YP +FD KG+L     
Sbjct: 303 ALNTVEMLRVASSSLGMGPQHAMQTAERLYTQGYISYPRTETTHYPENFDLKGSLRQQAN 362

Query: 365 NPEWGDYVRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGS 424
           +P W D V+ LL++G ++PR G DAGDHPPITPM SATE  LG DAWRLY+Y+ +HFI +
Sbjct: 363 HPYWADTVKRLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGDAWRLYEYITRHFIAT 422

Query: 425 LSSDCKYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVS-EKKLPQFLKGEKIEVS 484
           +S DCKY+++ I F I  E+F C+G  V+  GFT +MPW +V  E+ LP   +G+   V 
Sbjct: 423 VSHDCKYLQSTISFRIGPELFTCSGKTVLSPGFTEVMPWQSVPLEESLPTCQRGDAFPVG 482

Query: 485 RVDLYQGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTN 544
            V + +  T PPDYL+E+ELI+LMEKHGIGTDASIPVHINNI +RNYV V++GR+L PTN
Sbjct: 483 EVKMLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTN 542

Query: 545 LGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKK 604
           LGI L+ GY  ID +L LP IRS +E+Q+ L+A+G+ ++  V+ + L  FK+K+ YFV  
Sbjct: 543 LGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYRQVLGHTLDVFKRKFHYFVDS 602

Query: 605 IDHMDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIK 664
           I  MD L E  FSPLA +G+ LS+CGKC R+MK+I ++P RL+C  C+E Y LPQ G IK
Sbjct: 603 IAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIK 662

Query: 665 LYKELTCPLDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSK 724
           LYKEL CPLD+FEL+L+S  G  GKS+PLCPYCYN PPF  +                  
Sbjct: 663 LYKELRCPLDDFELVLWS-SGSRGKSYPLCPYCYNHPPFRDMKK---------------- 722

Query: 725 GIGMPCFLCPHPTCRHSLITQGVCACPEC-SGTLVLDPVGAPNWKLNCNKCNCIVFLPKG 784
             GM C  C HP+C+HSL   G+  C EC SG LVLDP   P WK+ CNKCN +    + 
Sbjct: 723 --GMGCNECTHPSCQHSLSMLGIGQCVECESGVLVLDPTSGPKWKVACNKCNVVAHCFEN 782

Query: 785 AHRISTTKEKCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFF 844
           AHR+  + + C+ C++ +++VDFNK  +PL    T  +GC+ CD     L+E+KH  S  
Sbjct: 783 AHRVRVSADTCSVCEAALLDVDFNKAKSPLPGDETQHMGCVFCDPVFQELVELKHAASCH 842

Query: 845 -RGRGSRGRGQGRGRGRGGRGRGSGKSMDPK 862
              RG  GR QGRGRGR  R  G      PK
Sbjct: 843 PMHRGGPGRRQGRGRGRARRPPGKPNPRRPK 851

[Close]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot
Match: O96651 (DNA topoisomerase 3-beta OS=Drosophila melanogaster OX=7227 GN=Top3beta PE=2 SV=2)

HSP 1 Score: 831.2 bits (2146), Expect = 1.0e-239
Identity = 423/864 (48.96%), Postives = 565/864 (65.39%), Query Frame = 0


Query: 5   SVLMVAEKPSIALSIASALSHGQMSTRKGS---TDVHEFDGKFLGL-HAHYKVTSAIGHI 64
           SVLMVAEKPS+A S+A  LS+G+ + ++G+      HE+ G F      H+++TS  GH+
Sbjct: 3   SVLMVAEKPSLAASLAGILSNGRCTAKRGTGNGCSTHEWTGNFRNEGSVHFRMTSVCGHV 62

Query: 65  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 124
            S+DF  K+  W   DP+ LF  +  K E+NPK ++R+ L  EARGCD LVLWLDCD+EG
Sbjct: 63  MSLDFNKKYNCWDKVDPIQLFGCATEKKETNPKQNMRKFLAHEARGCDYLVLWLDCDKEG 122

Query: 125 ENICFEVIDCTGFGGNDF--RKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQE 184
           ENICFEV+D      N+    +  YRA FS++TEKDI KA++ L  PN NEA +VDARQE
Sbjct: 123 ENICFEVMDAVKHVINNVYSDQVTYRAHFSAITEKDIKKAMETLGHPNENEAKSVDARQE 182

Query: 185 IDLKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSV 244
           +DL++G AFTR+QT FFQ +YG+LDS LISYGPCQTPTLGFCV+RH  I TFKPE +W +
Sbjct: 183 LDLRIGCAFTRFQTKFFQDRYGDLDSSLISYGPCQTPTLGFCVKRHDDIQTFKPESFWHL 242

Query: 245 CPYIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTV 304
              ++    E+ L+W RG++F  D+A+M   RV E   A V  +  K+  K++P  LNTV
Sbjct: 243 --QLLAGQPEVTLEWARGRVFKKDIAIMLLNRVKEHKKATVESVASKEAYKSKPQALNTV 302

Query: 305 NLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWG 364
            L+++ SS LG GP  AMQ+AERLYTQGYISYPRTE+  YP++FD    LH L  + ++G
Sbjct: 303 ELMRICSSGLGIGPFQAMQIAERLYTQGYISYPRTETNQYPTNFDLPAVLHVLKPSADFG 362

Query: 365 DYVRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDC 424
           +  R +L D    PR G DAGDHPPITPM         RD WR+Y+++C+HF+G++S D 
Sbjct: 363 EEARSILGD-IQTPRKGKDAGDHPPITPMKLGNRSDFDRDTWRVYEFICRHFMGTVSRDL 422

Query: 425 KYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAV-SEKKLPQFLKGEKIEVSRVDLY 484
           KY  T  + S+  E F CT S ++  GFT +M W A   ++  P F++G ++ ++ V L 
Sbjct: 423 KYRVTTAKLSVGMETFSCTASVLIDAGFTKVMTWSAFGKDEPQPPFVQGTQVAINDVRLI 482

Query: 485 QGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITL 544
           +  T PPDYL+ESELI+LME+HGIGTDASIPVHINNI +RNYV ++ GRKL+PT LGI L
Sbjct: 483 ESQTGPPDYLTESELITLMEEHGIGTDASIPVHINNICQRNYVHIENGRKLMPTTLGIVL 542

Query: 545 IRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMD 604
           + GYQ IDP+L LP +R+ +E+ +TL+A+G      V+++ ++ FK K+ YFVK ID MD
Sbjct: 543 VHGYQKIDPELVLPTMRTEVERMLTLIAQGSANFQDVLRHAIKIFKLKFMYFVKNIDSMD 602

Query: 605 ALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKEL 664
           ALFE  FSPLA+SG+A S+CGKC RYMK+I ++P RL+C  C+E Y LP  G +K+Y+E 
Sbjct: 603 ALFEVSFSPLAESGKAHSRCGKCRRYMKYIQTKPARLHCSHCDETYALP-IGNVKVYREF 662

Query: 665 TCPLDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMP 724
            CPLD+F+LL FS  G +G+S+P CPYCYN PPF  +  L G                  
Sbjct: 663 KCPLDDFDLLAFS-TGVKGRSYPFCPYCYNHPPFSDMPHLGG------------------ 722

Query: 725 CFLCPHPTCRHSLITQGVCACPEC-SGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRIS 784
           C  C +  C HSL T G+ +C EC +G LVLD   AP WKL CN+C+ I+   KGA +I+
Sbjct: 723 CNTCTNANCPHSLNTLGISSCVECPTGVLVLDCTLAPTWKLGCNRCDVIINCFKGATKIT 782

Query: 785 TTKEKCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKH----GKSFFR 844
             + KC EC +  + V +    +  +DG+    GCI C      L+E KH     +    
Sbjct: 783 VEEAKCQECGAQQVNVVYKSDKSKFKDGSEEKSGCIFCSADFSHLVE-KHRAVASRPVRS 842

Query: 845 GRGSRGRGQGR-GRGRGGRGRGSG 856
           G G RG   GR G G GG   GSG
Sbjct: 843 GGGFRGGKAGRGGGGMGGAAFGSG 842

[Close]

BLAST of Sed0005840 vs. ExPASy TrEMBL
Match: A0A6J1GWS0 (DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111457562 PE=3 SV=1)

HSP 1 Score: 1685.6 bits (4364), Expect = 0.0e+00
Identity = 803/867 (92.62%), Postives = 842/867 (97.12%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN++RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNEYRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VR+LLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRVLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           +RTKIQFSIAGEIF+CTGS VMVKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 LRTKIQFSIAGEIFNCTGSSVMVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDTLYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGR GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGR-GRGRSSGKLMDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. ExPASy TrEMBL
Match: A0A6J1IRJ0 (DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111479340 PE=3 SV=1)

HSP 1 Score: 1684.5 bits (4361), Expect = 0.0e+00
Identity = 804/867 (92.73%), Postives = 841/867 (97.00%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVASSVLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HAHYKVTS IGH+
Sbjct: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAHYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFPA+FQDWK TDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPARFQDWKATDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN+ RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNENRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGV+FTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVSFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERG+LFD DVA MF+KRV EDGIAEVT+I EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGRLFDCDVATMFQKRVMEDGIAEVTQISEKQESKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALG+GPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY
Sbjct: 301 LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPM  ATEDM+GRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMSLATEDMVGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           IRTKIQFSIAGEIF+CTGS V+VKGFTSIMPWLAV+EKKLPQFLKG+KIEV++VDLYQGN
Sbjct: 421 IRTKIQFSIAGEIFNCTGSSVLVKGFTSIMPWLAVNEKKLPQFLKGQKIEVAKVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TSPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIEQQIT VAKGQ +HFSVVQNVLQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEQQITFVAKGQADHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLA+SGRALSKCGKCLRYMKFISSQPQRLYCG CEEVYYLPQ+GAIKLYKELTCP
Sbjct: 601 EAQFSPLAESGRALSKCGKCLRYMKFISSQPQRLYCGTCEEVYYLPQRGAIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT P SGASSKG+GMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDALYGAAKTNPSSGASSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNC+VFLP+GAHRI+TT E
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCLVFLPQGAHRIATTNE 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDSTIIEVDFNKKTTPLE GATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG
Sbjct: 781 KCAECDSTIIEVDFNKKTTPLEGGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGR GRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGR-GRGRSSGKLMDPKMSFRDF 866

[Close]

BLAST of Sed0005840 vs. ExPASy TrEMBL
Match: A0A6J1CBL5 (DNA topoisomerase OS=Momordica charantia OX=3673 GN=LOC111009207 PE=3 SV=1)

HSP 1 Score: 1682.5 bits (4356), Expect = 0.0e+00
Identity = 802/867 (92.50%), Postives = 836/867 (96.42%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVAS+VLMVAEKPSIALSIASALSHGQMSTRKGSTD+HEFDG+FLGLHAHYKVTS IGHI
Sbjct: 1   MVASTVLMVAEKPSIALSIASALSHGQMSTRKGSTDIHEFDGRFLGLHAHYKVTSVIGHI 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DFP +FQ+W TTDPLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFPDRFQNWTTTDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN+FRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNEFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGVAFTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERGKLFD DVAVMF+KRVTEDGI EVTEI EKQE+K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGKLFDCDVAVMFQKRVTEDGIVEVTEISEKQESKHRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALGFGPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLHSL+KNPEWGDY
Sbjct: 301 LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLLKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VR+LLSDGYSKPRSGTDAGDHPP+TPMC ATEDMLGRDAWRLYQYVCQHFIGSLS DCKY
Sbjct: 361 VRVLLSDGYSKPRSGTDAGDHPPVTPMCLATEDMLGRDAWRLYQYVCQHFIGSLSPDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
            RTKIQFSIAGEIFHCTG HVM KGFTSIMPWLAV+EKKLPQFLKGEKIEV+RVDLYQGN
Sbjct: 421 TRTKIQFSIAGEIFHCTGVHVMAKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPT LGITLIRG
Sbjct: 481 TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTALGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDL LPDIRSFIEQQITLVAKGQV+HFSVVQN LQQFKQKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLGLPDIRSFIEQQITLVAKGQVDHFSVVQNALQQFKQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLADSGR+ SKCGKCLRYMKFISSQPQR+YC  CEEVYYLPQKG IKLYKELTCP
Sbjct: 601 EAQFSPLADSGRSFSKCGKCLRYMKFISSQPQRMYCNTCEEVYYLPQKGTIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+FSLPGPEGKSFPLCPYCYNSPPFEGID+LYGA+KT   SG S+KGIGMPCFL
Sbjct: 661 LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDALYGAAKTTQSSGKSTKGIGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPV APNW+LNCNKCN +VFLP+GAHRISTT +
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWRLNCNKCNFLVFLPQGAHRISTTND 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC ECDS IIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGR 
Sbjct: 781 KCDECDSKIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRS 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGRGGRGRG+G+SMDPKMSFRDF
Sbjct: 841 RGRGRGRGGRGRGAGRSMDPKMSFRDF 867

[Close]

BLAST of Sed0005840 vs. ExPASy TrEMBL
Match: A0A0A0L9C7 (DNA topoisomerase OS=Cucumis sativus OX=3659 GN=Csa_3G172970 PE=3 SV=1)

HSP 1 Score: 1669.4 bits (4322), Expect = 0.0e+00
Identity = 797/867 (91.93%), Postives = 831/867 (95.85%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVA +VLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HA+YKVTS IGH+
Sbjct: 1   MVAPTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHV 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DF A FQDWK+TDPLDLFQASVIKTESNPKAHI QHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFQAGFQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN  RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGVAFTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YI+  GYELNLDWERGKLFD DV  MF+KRV EDGIAEVTEI EKQE K RPSGLNTVNL
Sbjct: 241 YILQTGYELNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALGFGPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLH+LVKNPEWGDY
Sbjct: 301 LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPMC ATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           IRTKIQFSIAGEIF+CTGS V VKGFTSIMPWLAV+EKKLPQFLKGEKIEV+RVDLYQGN
Sbjct: 421 IRTKIQFSIAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIE QITLVAKGQ +H SVVQ+VLQQF+QKYSYFVKKIDHMDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKG IKLYKELTCP
Sbjct: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL++SLPGPEGKSFPLCPYCYNSPPFEGI++LYGASK  P SG SSKG+GMPCF+
Sbjct: 661 LDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFM 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPV APNWKLNCNKCNC+VFLPKGAHRISTT++
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRD 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRG 840
           KC +CDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSF R RGSRGRG
Sbjct: 781 KCADCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRG 840

Query: 841 QGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           +GRGRGRGGRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGRGGRGRSSGKPMDPKMSFRDF 867

[Close]

BLAST of Sed0005840 vs. ExPASy TrEMBL
Match: A0A1S3AYH7 (DNA topoisomerase OS=Cucumis melo OX=3656 GN=LOC103483959 PE=3 SV=1)

HSP 1 Score: 1667.9 bits (4318), Expect = 0.0e+00
Identity = 802/869 (92.29%), Postives = 831/869 (95.63%), Query Frame = 0


Query: 1   MVASSVLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHI 60
           MVAS+VLMVAEKPSIALSIASALSHGQMSTRKGST+VHEFDG+FLG HA+YKVTS IGHI
Sbjct: 1   MVASTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHI 60

Query: 61  FSVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREG 120
           FS+DF A FQDWKTT+PLDLFQASVIKTESNPKAHIRQHL+REARGCDCLVLWLDCDREG
Sbjct: 61  FSIDFQAGFQDWKTTNPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG 120

Query: 121 ENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 180
           ENICFEVI+CTGFGGN  RKKVYRARFSSVTEKDILKALDNLV+PNRNEALAVDARQEID
Sbjct: 121 ENICFEVIECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEID 180

Query: 181 LKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCP 240
           LKVGVAFTR+QTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEK+WSVCP
Sbjct: 181 LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP 240

Query: 241 YIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNL 300
           YIM NGYELNLDWERGKLFD DV  MF+KRV EDGIAEVTEI EKQE K RPSGLNTVNL
Sbjct: 241 YIMQNGYELNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNL 300

Query: 301 LKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDY 360
           LKVASSALGFGPQMAMQLAERLYTQG+ISYPRTESTAYPSSFDFKGTLH+LVKNPEWGDY
Sbjct: 301 LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDY 360

Query: 361 VRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420
           VRMLLSDGYSKPRSGTD GDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY
Sbjct: 361 VRMLLSDGYSKPRSGTDVGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKY 420

Query: 421 IRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGN 480
           IRTKIQFSIAGEIF+CTGS V VKGFTSIMPWLAV+EKKLPQFLKGEKIEV+RVDLYQGN
Sbjct: 421 IRTKIQFSIAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN 480

Query: 481 TMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRG 540
           T PPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGR+LVPTNLGITLIRG
Sbjct: 481 TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRG 540

Query: 541 YQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALF 600
           YQCIDPDLCLPDIRSFIE QITLVAKGQ +H SVV++VLQQFKQKYSYFVKKID MDALF
Sbjct: 541 YQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVESVLQQFKQKYSYFVKKIDRMDALF 600

Query: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCP 660
           EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKG IKLYKELTCP
Sbjct: 601 EAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCP 660

Query: 661 LDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFL 720
           LDNFELL+ SLPGPEGKSFPLCPYCYNSPPFEGID+LYGASKT P SG SSKG+GMPCFL
Sbjct: 661 LDNFELLILSLPGPEGKSFPLCPYCYNSPPFEGIDTLYGASKTNPSSGTSSKGMGMPCFL 720

Query: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKE 780
           CPHPTCRHSLITQGVCACPECSGTLVLDPV APNWKLNCNKCNC+VFLP+GAHRISTT +
Sbjct: 721 CPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPQGAHRISTTSD 780

Query: 781 KCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGS--RG 840
           KC +CDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHG SF R R S  RG
Sbjct: 781 KCADCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGNSFIRNRFSRGRG 840

Query: 841 RGQGRGRGRGGRGRGSGKSMDPKMSFRDF 868
           RG+GRGRGRGGRGR SGK MDPKMSFRDF
Sbjct: 841 RGRGRGRGRGGRGRNSGKPMDPKMSFRDF 869

[Close]

BLAST of Sed0005840 vs. TAIR 10
Match: AT2G32000.1 (DNA topoisomerase, type IA, core )

HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 659/862 (76.45%), Postives = 749/862 (86.89%), Query Frame = 0


Query: 6   VLMVAEKPSIALSIASALSHGQMSTRKGSTDVHEFDGKFLGLHAHYKVTSAIGHIFSVDF 65
           VLMVAEKPSIALSIAS LSHGQMSTR+GST+VHEFDG F G  AHY+VTS IGH+FSVDF
Sbjct: 7   VLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGHVFSVDF 66

Query: 66  PAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREGENICF 125
           P K+Q+W T DP DLF A +IK ESNPKAHI +HL+ EARGC  +VLWLDCDREGENICF
Sbjct: 67  PEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDREGENICF 126

Query: 126 EVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEIDLKVGV 185
           EVI+ TGF   D ++KVYRARFSSVTEKDI KA+DNLV+PNR+EALAVDARQEIDLKVGV
Sbjct: 127 EVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEIDLKVGV 186

Query: 186 AFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKYWSVCPYIMLN 245
           AF+R+QT++FQGKY NLD R+ISYGPCQTPTLGFCVQR++ I TFKPEK+W++ PYI  +
Sbjct: 187 AFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALRPYIRKD 246

Query: 246 GYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGLNTVNLLKVAS 305
           GYEL L+WER +LFD + A +F+K V E   A+V ++ EKQE K RP+GLNTVNLLKVAS
Sbjct: 247 GYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVNLLKVAS 306

Query: 306 SALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNPEWGDYVRMLL 365
           SALGFGPQ AM LAERLYTQG+ISYPRTESTAYPSSFDF  TL + V NP WG YV+ LL
Sbjct: 307 SALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLL 366

Query: 366 SDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKI 425
           SDG+  P+SGTDAGDHPPITPM +ATE M+G DAWRLYQYVCQHF+G++S +CKYIRTK+
Sbjct: 367 SDGFHMPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCKYIRTKV 426

Query: 426 QFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVDLYQGNTMPPD 485
           + SI GE FHCTG  V  KGFT+IMPW AV EKKLP FLKGE+IEV RV+LY+GNT PPD
Sbjct: 427 ELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPPD 486

Query: 486 YLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGITLIRGYQCID 545
           YL+ESELISLMEKHGIGTDASI VHINNIGERNYVQVQ+GRK+VPT LGITLIRGYQCID
Sbjct: 487 YLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCID 546

Query: 546 PDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDHMDALFEAQFS 605
           PDLCLPDIRSFIEQQITLVAKGQ +H  VVQ+V+QQF++K+SYFV++I+HMDALFEAQFS
Sbjct: 547 PDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFS 606

Query: 606 PLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYKELTCPLDNFE 665
           PLADSGRALSKCGKCLRYMK I++ P RL+CG CEEVYYLPQKG +KLYKELTCPLDNFE
Sbjct: 607 PLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFE 666

Query: 666 LLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIGMPCFLCPHPT 725
           L+++S+PGPEGKSFPLCPYCYNSPPFEGID+L+GASKT      +  G GMPC LCPHPT
Sbjct: 667 LVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPT 726

Query: 726 CRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRISTTKEKCTEC 785
           C+HS+  QGVCACPEC GTLVLDPV  P WKLNCN C+CIV LP+GAHRI+TT  +C EC
Sbjct: 727 CQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPEC 786

Query: 786 DSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRGQGRGR 845
           DS IIE+DFNKKTTPLE+GATL  GC+LCDE L SL+E+KHG+SF R RG RGRG+GRGR
Sbjct: 787 DSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVR-RGGRGRGRGRGR 846

Query: 846 GRGGRGRGSGKSMDPKMSFRDF 868
           GRGGR RGS KS+DPKMSFRDF
Sbjct: 847 GRGGR-RGS-KSVDPKMSFRDF 865

[Close]

BLAST of Sed0005840 vs. TAIR 10
Match: AT2G32000.2 (DNA topoisomerase, type IA, core )

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 614/812 (75.62%), Postives = 701/812 (86.33%), Query Frame = 0


Query: 59  HIFSV---DFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLD 118
           H+ SV   DFP K+Q+W T DP DLF A +IK ESNPKAHI +HL+ EARGC  +VLWLD
Sbjct: 30  HLLSVMFSDFPEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLD 89

Query: 119 CDREGENICFEVIDCTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDA 178
           CDREGENICFEVI+ TGF   D ++KVYRARFSSVTEKDI KA+DNLV+PNR+EALAVDA
Sbjct: 90  CDREGENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDA 149

Query: 179 RQEIDLKVGVAFTRYQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKY 238
           RQEIDLKVGVAF+R+QT++FQGKY NLD R+ISYGPCQTPTLGFCVQR++ I TFKPEK+
Sbjct: 150 RQEIDLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKF 209

Query: 239 WSVCPYIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQETKARPSGL 298
           W++ PYI  +GYEL L+WER +LFD + A +F+K V E   A+V ++ EKQE K RP+GL
Sbjct: 210 WALRPYIRKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGL 269

Query: 299 NTVNLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVKNP 358
           NTVNLLKVASSALGFGPQ AM LAERLYTQG+ISYPRTESTAYPSSFDF  TL + V NP
Sbjct: 270 NTVNLLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNP 329

Query: 359 EWGDYVRMLLSDGYSKPRSGTDAGDHPPITPMCSATEDMLGRDAWRLYQYVCQHFIGSLS 418
            WG YV+ LLSDG+  P+SGTDAGDHPPITPM +ATE M+G DAWRLYQYVCQHF+G++S
Sbjct: 330 VWGGYVQRLLSDGFHMPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVS 389

Query: 419 SDCKYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEKIEVSRVD 478
            +CKYIRTK++ SI GE FHCTG  V  KGFT+IMPW AV EKKLP FLKGE+IEV RV+
Sbjct: 390 PNCKYIRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVE 449

Query: 479 LYQGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTNLGI 538
           LY+GNT PPDYL+ESELISLMEKHGIGTDASI VHINNIGERNYVQVQ+GRK+VPT LGI
Sbjct: 450 LYEGNTAPPDYLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGI 509

Query: 539 TLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKYSYFVKKIDH 598
           TLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQ +H  VVQ+V+QQF++K+SYFV++I+H
Sbjct: 510 TLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEH 569

Query: 599 MDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGAIKLYK 658
           MDALFEAQFSPLADSGRALSKCGKCLRYMK I++ P RL+CG CEEVYYLPQKG +KLYK
Sbjct: 570 MDALFEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYK 629

Query: 659 ELTCPLDNFELLLFSLPGPEGKSFPLCPYCYNSPPFEGIDSLYGASKTAPGSGASSKGIG 718
           ELTCPLDNFEL+++S+PGPEGKSFPLCPYCYNSPPFEGID+L+GASKT      +  G G
Sbjct: 630 ELTCPLDNFELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAG 689

Query: 719 MPCFLCPHPTCRHSLITQGVCACPECSGTLVLDPVGAPNWKLNCNKCNCIVFLPKGAHRI 778
           MPC LCPHPTC+HS+  QGVCACPEC GTLVLDPV  P WKLNCN C+CIV LP+GAHRI
Sbjct: 690 MPCSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRI 749

Query: 779 STTKEKCTECDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRG 838
           +TT  +C ECDS IIE+DFNKKTTPLE+GATL  GC+LCDE L SL+E+KHG+SF R RG
Sbjct: 750 TTTSNRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVR-RG 809

Query: 839 SRGRGQGRGRGRGGRGRGSGKSMDPKMSFRDF 868
            RGRG+GRGRGRGGR RGS KS+DPKMSFRDF
Sbjct: 810 GRGRGRGRGRGRGGR-RGS-KSVDPKMSFRDF 838

[Close]

BLAST of Sed0005840 vs. TAIR 10
Match: AT5G63920.1 (topoisomerase 3alpha )

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-108
Identity = 233/640 (36.41%), Postives = 346/640 (54.06%), Query Frame = 0


Query: 5   SVLMVAEKPSIALSIASALSHGQMSTRKGST---DVHEFDGKFLGLHAHYKVTSAIGHIF 64
           +VL VAEKPS+A S+A  LS G   TR+G +    + EFD    G      +TS IGH+ 
Sbjct: 10  TVLNVAEKPSVAKSVAGILSRGTFRTREGRSRYNKIFEFDYAINGQPCRMLMTSVIGHLM 69

Query: 65  SVDFPAKFQDWKTTDPLDLFQASVIKTESNPKAHIRQHLNREARGCDCLVLWLDCDREGE 124
            ++F  +++ W + DP DL+QA V+K     K  I++ L  EAR  D LVLWLDCDREGE
Sbjct: 70  ELEFADRYRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARKSDWLVLWLDCDREGE 129

Query: 125 NICFEVID-CTGFGGNDFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID 184
           NI FEV+D C     N F   + RA FS++ ++DI +A+ NL  PN+  A AVDARQEID
Sbjct: 130 NIAFEVVDVCRAVKHNLF---IRRAHFSALIDRDIHEAVQNLRDPNQLFAEAVDARQEID 189

Query: 185 LKVGVAFTRYQTTFFQGKY-----GNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKY 244
           L++G +FTR+QT   + ++     G   SR+ISYGPCQ PTLGF V+R+ +I   +PE++
Sbjct: 190 LRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 249

Query: 245 WSV-CPYIMLNGYELNLDWERGKLFDSDVAVMFEKRVTEDGIAEVTEIIEKQET-KARPS 304
           W++ C +    G     +W RG LFD   AV+  +   E+  A V  +   +E  K  P 
Sbjct: 250 WTINCSHQSEEGL-ATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKYPPY 309

Query: 305 GLNTVNLLKVASSALGFGPQMAMQLAERLYTQGYISYPRTESTAYPSSFDFKGTLHSLVK 364
            LNT+ L K AS       +  M++AE LY  G+ISYPRTE+ ++ S  D +  +    +
Sbjct: 310 PLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAMVEEQTR 369

Query: 365 NPEWGDYVRMLLSD----GYSKPRSGTDAGDHPPITP-MCSATEDMLGRDAWRLYQYVCQ 424
           +P WG Y + LL        +    G D   HPPI P   S+ E    RD   +Y+ V +
Sbjct: 370 HPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELVVR 429

Query: 425 HFIGSLSSDCKYIRTKIQFSIAGEIFHCTGSHVMVKGFTSIMPWLAVSEKKLPQFLKGEK 484
           H++  +S       T ++  IAGE F  +G  ++ K +  +  + +     +P + KG++
Sbjct: 430 HYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQ 489

Query: 485 IEVSRVDLYQGNTMPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKL 544
              + + L    T PP  L E++L+S M+K GIGTDA++  HI  + +R Y    A  + 
Sbjct: 490 FIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRF 549

Query: 545 VPTNLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVEHFSVVQNVLQQFKQKY-S 604
            PTNLG  L+ GY  +  +L  P++R+ +E  +  V+ G+     V++  LQQ K  +  
Sbjct: 550 SPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQMKACFLD 609

Query: 605 YFVKK---IDHMDALFE----AQFSPLADSGRALSKCGKC 621
             VKK   ++ M   FE       S    +G  + +C  C
Sbjct: 610 ARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLC 645

The following BLAST results are available for this feature:

BLAST of Sed0005840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528530.1	0.0e+00	92.86	DNA topoisomerase 3-beta isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6582102.1	0.0e+00	92.73	DNA topoisomerase 3-beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022955609.1	0.0e+00	92.62	DNA topoisomerase 3-beta isoform X1 [Cucurbita moschata]	[more]
XP_022979706.1	0.0e+00	92.73	DNA topoisomerase 3-beta isoform X1 [Cucurbita maxima]	[more]
XP_022137893.1	0.0e+00	92.50	DNA topoisomerase 3-beta isoform X1 [Momordica charantia]	[more]

BLAST of Sed0005840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4ISQ7	0.0e+00	76.45	DNA topoisomerase 3-beta OS=Arabidopsis thaliana OX=3702 GN=At2g32000 PE=2 SV=1	[more]
Q0J0S6	0.0e+00	73.04	DNA topoisomerase 3-beta OS=Oryza sativa subsp. japonica OX=39947 GN=TOP3B PE=2 ...	[more]
Q9Z321	2.1e-264	52.65	DNA topoisomerase 3-beta-1 OS=Mus musculus OX=10090 GN=Top3b PE=1 SV=1	[more]
O95985	8.7e-263	52.01	DNA topoisomerase 3-beta-1 OS=Homo sapiens OX=9606 GN=TOP3B PE=1 SV=1	[more]
O96651	1.0e-239	48.96	DNA topoisomerase 3-beta OS=Drosophila melanogaster OX=7227 GN=Top3beta PE=2 SV=...	[more]

BLAST of Sed0005840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWS0	0.0e+00	92.62	DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111457562 PE=3 SV=1	[more]
A0A6J1IRJ0	0.0e+00	92.73	DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111479340 PE=3 SV=1	[more]
A0A6J1CBL5	0.0e+00	92.50	DNA topoisomerase OS=Momordica charantia OX=3673 GN=LOC111009207 PE=3 SV=1	[more]
A0A0A0L9C7	0.0e+00	91.93	DNA topoisomerase OS=Cucumis sativus OX=3659 GN=Csa_3G172970 PE=3 SV=1	[more]
A0A1S3AYH7	0.0e+00	92.29	DNA topoisomerase OS=Cucumis melo OX=3656 GN=LOC103483959 PE=3 SV=1	[more]

BLAST of Sed0005840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32000.1	0.0e+00	76.45	DNA topoisomerase, type IA, core	[more]
AT2G32000.2	0.0e+00	75.62	DNA topoisomerase, type IA, core	[more]
AT5G63920.1	1.1e-108	36.41	topoisomerase 3alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013497	DNA topoisomerase, type IA, central	PRINTS	PR00417	PRTPISMRASEI	coord: 402..418 score: 22.14 coord: 325..334 score: 51.04 coord: 500..514 score: 31.41 coord: 207..225 score: 35.58 coord: 110..123 score: 53.58
IPR013497	DNA topoisomerase, type IA, central	PFAM	PF01131	Topoisom_bac	coord: 165..575 e-value: 3.3E-104 score: 349.2
IPR013497	DNA topoisomerase, type IA, central	CDD	cd00186	TOP1Ac	coord: 168..586 e-value: 1.58233E-116 score: 357.685
IPR006171	TOPRIM domain	SMART	SM00493	toprim5	coord: 5..136 e-value: 1.4E-17 score: 74.4
IPR006171	TOPRIM domain	PFAM	PF01751	Toprim	coord: 6..149 e-value: 3.2E-16 score: 59.4
IPR006171	TOPRIM domain	PROSITE	PS50880	TOPRIM	coord: 5..148 score: 18.959576
IPR003601	DNA topoisomerase, type IA, domain 2	SMART	SM00436	topIban2	coord: 141..237 e-value: 1.4E-33 score: 127.5
IPR003602	DNA topoisomerase, type IA, DNA-binding domain	SMART	SM00437	topIaneu2	coord: 283..538 e-value: 1.4E-70 score: 250.5
None	No IPR available	GENE3D	3.40.50.140		coord: 1..165 e-value: 1.4E-53 score: 183.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 832..867
None	No IPR available	PANTHER	PTHR11390:SF20	DNA TOPOISOMERASE 3-BETA-1	coord: 5..845
IPR013826	DNA topoisomerase, type IA, central region, subdomain 3	GENE3D	1.10.290.10	Topoisomerase I, domain 4	coord: 291..416 e-value: 2.1E-145 score: 486.4
IPR013825	DNA topoisomerase, type IA, central region, subdomain 2	GENE3D	2.70.20.10	Topoisomerase I, domain 3	coord: 231..484 e-value: 2.1E-145 score: 486.4
IPR013824	DNA topoisomerase, type IA, central region, subdomain 1	GENE3D	1.10.460.10	Topoisomerase I, domain 2	coord: 172..586 e-value: 2.1E-145 score: 486.4
IPR000380	DNA topoisomerase, type IA	PANTHER	PTHR11390	PROKARYOTIC DNA TOPOISOMERASE	coord: 5..845
IPR023406	DNA topoisomerase, type IA, active site	PROSITE	PS00396	TOPOISOMERASE_I_PROK	coord: 320..334
IPR034144	DNA topoisomerase 3-like, TOPRIM domain	CDD	cd03362	TOPRIM_TopoIA_TopoIII	coord: 6..162 e-value: 6.46921E-54 score: 182.048
IPR023405	DNA topoisomerase, type IA, core domain	SUPERFAMILY	56712	Prokaryotic type I DNA topoisomerase	coord: 6..625

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005840.1	Sed0005840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity
molecular_function	GO:0003916	DNA topoisomerase activity