Sed0005818 (gene) Chayote v1

Overview


Name	Sed0005818
Type	gene
Organism	Sechium edule (Chayote v1)
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	LG14: 2599830 .. 2600717 (-)
RNA-Seq Expression	Sed0005818
Synteny	Sed0005818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATAATACAAGAGGTAGAATATGGCGCTGATGGTAAATTCTCTTATTTTAATTGATTTAAAACAAATGATTAAAATTTATTAAATAATTAAAAAGAGTTTTTTTTACTCAGGTTTTTAGGTTTTTCAGAGTTATTAATTCTTAAAACTAAATCATATGTAAATATAAACCCTAATCCCTTATTCCTCCTCCGCCGAAGATGTGGGCCGCATTCTCCTCCGCAACAGCGCTCGTCCGGTCCATAGCCACCAAGCTCCTCGCCTTCGTCGACTCCGCGTTTCCATCTGAAACCAAATTCGTAATCGCCGAACAATCCCCATTCGCGTACGTTTTCCAAGCCGCCGAGATCTATCTCCGCCCCAAAATCGTCCAGACCGACAACCAAGTAATCGCCGATGAATTCGAAACTGTCCCCCTCCGGTGGCAACTCATCTCCACCGGAGAGAACAATCGCCGTTTCGAACTCACTTTCCCCACCAAATTCAGCACCCTAATCACCGATTCCTATATTCCTTATTTGATGGTAAGAGCAGAGGAGAAAAAAATTGTGGTGATACCCACTACCCACTACTGGGATTTAATTGATCCGCCGACTTTGGATACTCTGGGAATGCATCCGGGGTTGAAGCGAAATATAATCACGGATTTGGATCTATTCGTTGGGGGAAGGGATTTGTACAGGAAGATCGGGGAGCCTTGGAGGAGGAGCTATTTGGTGTCTACTTACTTCGTCAGAGCCACCTTAATCGCCGTCTTTGCTTCACCTGGATTGGATTGATATTCATATATACCTGTCGCGAATGATCAAGATATTCAATCAAAAACCACTGGAATAATTTACTAACAGGGACTGGAAGCTGGGTCAGAGAATTTGATGATATATAATAG

mRNA sequence

ATATAATACAAGAGGTAGAATATGGCGCTGATGGTAAATTCTCTTATTTTAATTGATTTAAAACAAATGATTAAAATTTATTAAATAATTAAAAAGAGTTTTTTTTACTCAGGTTTTTAGGTTTTTCAGAGTTATTAATTCTTAAAACTAAATCATATGTAAATATAAACCCTAATCCCTTATTCCTCCTCCGCCGAAGATGTGGGCCGCATTCTCCTCCGCAACAGCGCTCGTCCGGTCCATAGCCACCAAGCTCCTCGCCTTCGTCGACTCCGCGTTTCCATCTGAAACCAAATTCGTAATCGCCGAACAATCCCCATTCGCGTACGTTTTCCAAGCCGCCGAGATCTATCTCCGCCCCAAAATCGTCCAGACCGACAACCAAGTAATCGCCGATGAATTCGAAACTGTCCCCCTCCGGTGGCAACTCATCTCCACCGGAGAGAACAATCGCCGTTTCGAACTCACTTTCCCCACCAAATTCAGCACCCTAATCACCGATTCCTATATTCCTTATTTGATGGTAAGAGCAGAGGAGAAAAAAATTGTGGTGATACCCACTACCCACTACTGGGATTTAATTGATCCGCCGACTTTGGATACTCTGGGAATGCATCCGGGGTTGAAGCGAAATATAATCACGGATTTGGATCTATTCGTTGGGGGAAGGGATTTGTACAGGAAGATCGGGGAGCCTTGGAGGAGGAGCTATTTGGTGTCTACTTACTTCGTCAGAGCCACCTTAATCGCCGTCTTTGCTTCACCTGGATTGGATTGATATTCATATATACCTGTCGCGAATGATCAAGATATTCAATCAAAAACCACTGGAATAATTTACTAACAGGGACTGGAAGCTGGGTCAGAGAATTTGATGATATATAATAG

Coding sequence (CDS)

ATGTGGGCCGCATTCTCCTCCGCAACAGCGCTCGTCCGGTCCATAGCCACCAAGCTCCTCGCCTTCGTCGACTCCGCGTTTCCATCTGAAACCAAATTCGTAATCGCCGAACAATCCCCATTCGCGTACGTTTTCCAAGCCGCCGAGATCTATCTCCGCCCCAAAATCGTCCAGACCGACAACCAAGTAATCGCCGATGAATTCGAAACTGTCCCCCTCCGGTGGCAACTCATCTCCACCGGAGAGAACAATCGCCGTTTCGAACTCACTTTCCCCACCAAATTCAGCACCCTAATCACCGATTCCTATATTCCTTATTTGATGGTAAGAGCAGAGGAGAAAAAAATTGTGGTGATACCCACTACCCACTACTGGGATTTAATTGATCCGCCGACTTTGGATACTCTGGGAATGCATCCGGGGTTGAAGCGAAATATAATCACGGATTTGGATCTATTCGTTGGGGGAAGGGATTTGTACAGGAAGATCGGGGAGCCTTGGAGGAGGAGCTATTTGGTGTCTACTTACTTCGTCAGAGCCACCTTAATCGCCGTCTTTGCTTCACCTGGATTGGATTGA

Protein sequence

MWAAFSSATALVRSIATKLLAFVDSAFPSETKFVIAEQSPFAYVFQAAEIYLRPKIVQTDNQVIADEFETVPLRWQLISTGENNRRFELTFPTKFSTLITDSYIPYLMVRAEEKKIVVIPTTHYWDLIDPPTLDTLGMHPGLKRNIITDLDLFVGGRDLYRKIGEPWRRSYLVSTYFVRATLIAVFASPGLD

Homology

[Close]

BLAST of Sed0005818 vs. NCBI nr
Match: TYK12592.1 (AAA-ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 5.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. NCBI nr
Match: XP_008440759.1 (PREDICTED: AAA-ATPase At2g18193-like [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 5.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. NCBI nr
Match: KAA0025718.1 (AAA-ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 5.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. NCBI nr
Match: XP_022132942.1 (AAA-ATPase At2g18193-like, partial [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-22
Identity = 88/230 (38.26%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIATKLL-----AFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   LVRS+  +LL     +F+ S F        S+TKFVI E S F +  VFQA
Sbjct: 20  YASFATTMMLVRSVTNELLPPKFISFLSSIFFYFFGSVSSQTKFVIEESSGFTFNQVFQA 79

Query: 62  AEIYLRPKI-VQTD-------------------NQVIADEFETVPLRWQLI-STGENN-- 121
           AE+YLR KI   TD                   +Q I D FE   L+W+ + S  E N  
Sbjct: 80  AEVYLRTKISPSTDTLKVSKTPRQKKVTLSIDKDQEITDYFENFRLQWRFVCSQDERNGN 139

Query: 122 ----RRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVIPTTH----------YWD 174
               R FEL FP KF   + D Y+PY++ RA    EE K+V I +             W 
Sbjct: 140 SREKRHFELIFPKKFRDRVVDFYLPYVLRRAKEIKEEDKVVKIYSQECQFDDDGGGGNWG 199

[Close]

BLAST of Sed0005818 vs. NCBI nr
Match: XP_038877872.1 (AAA-ATPase At2g18193-like [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-22
Identity = 82/230 (35.65%), Postives = 116/230 (50.43%), Query Frame = 0


Query: 2   WAAFSSATALVRSIATKLL-----AFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+  +LL     +F+ S F        S+TKFVI E S F    VFQA
Sbjct: 20  YASFATTMMLIRSVTNELLPAKFISFLSSIFVYFFGSIASQTKFVIEENSGFTINEVFQA 79

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 80  AEFYLRTKISPSIDTLKVSKTPRQKKVRLSIDKDQEIIDYFENIRLQWRFVCSVDERNGG 139

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R FEL+FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 140 GGREKRHFELSFPKKFRDRVVDFYLPYVLKRAKEIKEEHKVVKIFSQECQYDDDSGGNWG 199

[Close]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot
Match: Q9FN77 (AAA-ATPase At5g17740 OS=Arabidopsis thaliana OX=3702 GN=At5g17740 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 55  KIVQTDNQVIADEFETVPLRWQLISTGENN----------------RRFELTFPTKFSTL 114
           K+  +D +V++D +  + L+W+ ++  +NN                   EL+F  K   L
Sbjct: 105 KLYLSDGEVVSDVYNGIKLKWRFLARNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDL 164

Query: 115 ITDSYIPYLMVRAEE----KKIVVIPTTHY----WDLID---PPTLDTLGMHPGLKRNII 174
           + +SYIPY+  +A+E    ++I+ +    +    W  ++   P T DT+ M+  LKR++I
Sbjct: 165 VVNSYIPYVESKAKEVNNKRRILKMHCYSHMAQTWQSVNFKHPSTFDTMAMNDDLKRSMI 224

[Close]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot
Match: Q9LJJ5 (AAA-ATPase At3g28610 OS=Arabidopsis thaliana OX=3702 GN=At3g28610 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.0e-14
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 56  IVQTDNQVIADEFETVPLRWQLISTGENNRRFELTFPTKFSTLITDSYIPYLM-----VR 115
           +++ D   + DE+E + + W++ +     +  +LTF  +   ++T+SYI Y++     + 
Sbjct: 107 VLKRDETKVRDEYEGIRVWWEMETDSAGYKTLKLTFHRRSRDIVTNSYIKYVVEEGKSID 166

Query: 116 AEEKKIVVI---PTTH-------YWDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGR 174
           A+ KK+ +    P++H       +W  ID   P T +TL M P  K  I+ DL  F  G+
Sbjct: 167 AKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGK 226

[Close]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot
Match: F4J0C0 (AAA-ATPase At3g28600 OS=Arabidopsis thaliana OX=3702 GN=At3g28600 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 0


Query: 30  ETKFVIAEQSPFAYVFQAAEIYLRPK-------------------IVQTDNQVIADEFET 89
           E  F   E   F + F A E YL  K                   +++ D   + DE+E 
Sbjct: 63  EISFSQYEDYQFNHAFAAIETYLGAKATDKAKHLRASQVKESKGLVLKRDETKVRDEYEG 122

Query: 90  VPLRWQLISTGENNRRFELTFPTKFSTLITDSYIPYLM-----VRAEEKKIVVI---PTT 149
             + W++ +     R F+LTF  +   ++TDSYI Y+      ++A+ K++ +    P++
Sbjct: 123 GTVWWEMETDSTGYRTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSS 182

Query: 150 H-------YWDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGRDLYRKIGEPWRRSYL 174
           H       +W  ID   P +  TL M    K  I+ DL  F  G++ Y+KIG+ W+R YL
Sbjct: 183 HWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYL 242

[Close]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot
Match: F4IQG2 (AAA-ATPase At2g18190 OS=Arabidopsis thaliana OX=3702 GN=At2g18190 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 50/175 (28.57%), Postives = 78/175 (44.57%), Query Frame = 0


Query: 44  VFQAAEIYLRPK--------------------IVQTDNQVIADEFETVPLRWQLI----- 103
           VF AAE+YLR K                    I     + I D FE   LRW  +     
Sbjct: 75  VFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWTYVESENE 134

Query: 104 STGENNRRFELTFPTKFSTLITDSYIPYLMVRAEEKKIVVIPTTHY-------------- 163
           ++ +  R +ELTF  K    + +SY+ +++  +EE K  +     Y              
Sbjct: 135 ASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMA 194

Query: 164 ---WDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGRDLYRKIGEPWRRSYLV 174
              W  I+   P T +TL M PG K+ II D++ F+  R+ Y+++G+ W+R YL+
Sbjct: 195 GAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLL 249

[Close]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot
Match: Q9FN75 (AAA-ATPase At5g17760 OS=Arabidopsis thaliana OX=3702 GN=At5g17760 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 41/150 (27.33%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 59  TDNQVIADEFETVPLRWQLISTGENNR--------------------------RFELTFP 118
           +D +++ D +E V L W+ ++ G + +                           FEL+F 
Sbjct: 109 SDGEIVNDVYEDVQLVWRFVTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFD 168

Query: 119 TKFSTLITDSYIPYLMVRA----EEKKIVVIPTTH--YWD---LIDPPTLDTLGMHPGLK 174
            K   LI +SY+PY+  +A    +E++I+++ + +   W+   L  P T +T+ M   LK
Sbjct: 169 KKHKDLILNSYVPYIESKAKEIRDERRILMLHSLNSLRWESVILEHPSTFETMAMEDDLK 228

[Close]

BLAST of Sed0005818 vs. ExPASy TrEMBL
Match: A0A5D3CMN5 (AAA-ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001760 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. ExPASy TrEMBL
Match: A0A5A7SHS5 (AAA-ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002150 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. ExPASy TrEMBL
Match: A0A1S3B2H6 (AAA-ATPase At2g18193-like OS=Cucumis melo OX=3656 GN=LOC103485078 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 84/230 (36.52%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIA-----TKLLAFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   L+RS+       KL++F+ S F        S+TKFVI E S FA   VFQA
Sbjct: 19  YASFATTMMLIRSVTNELLPAKLISFLSSIFVYFFGSISSQTKFVIEENSGFAMNEVFQA 78

Query: 62  AEIYLRPKIVQT--------------------DNQVIADEFETVPLRWQLIST------- 121
           AE YLR KI  +                     +Q I D FE + L+W+ + +       
Sbjct: 79  AEFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGG 138

Query: 122 -GENNRRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW- 174
            G   R+FEL FP KF   + D Y+PY++ RA    EE K+V I          +   W 
Sbjct: 139 GGREKRQFELLFPKKFRDRVVDFYLPYVLKRAKEIKEENKVVKIFSQECQYDDDSGGNWG 198

[Close]

BLAST of Sed0005818 vs. ExPASy TrEMBL
Match: A0A6J1BV86 (AAA-ATPase At2g18193-like OS=Momordica charantia OX=3673 GN=LOC111005662 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 88/230 (38.26%), Postives = 117/230 (50.87%), Query Frame = 0


Query: 2   WAAFSSATALVRSIATKLL-----AFVDSAF-------PSETKFVIAEQSPFAY--VFQA 61
           +A+F++   LVRS+  +LL     +F+ S F        S+TKFVI E S F +  VFQA
Sbjct: 20  YASFATTMMLVRSVTNELLPPKFISFLSSIFFYFFGSVSSQTKFVIEESSGFTFNQVFQA 79

Query: 62  AEIYLRPKI-VQTD-------------------NQVIADEFETVPLRWQLI-STGENN-- 121
           AE+YLR KI   TD                   +Q I D FE   L+W+ + S  E N  
Sbjct: 80  AEVYLRTKISPSTDTLKVSKTPRQKKVTLSIDKDQEITDYFENFRLQWRFVCSQDERNGN 139

Query: 122 ----RRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVIPTTH----------YWD 174
               R FEL FP KF   + D Y+PY++ RA    EE K+V I +             W 
Sbjct: 140 SREKRHFELIFPKKFRDRVVDFYLPYVLRRAKEIKEEDKVVKIYSQECQFDDDGGGGNWG 199

[Close]

BLAST of Sed0005818 vs. ExPASy TrEMBL
Match: A0A0A0KGJ8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504460 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 84/229 (36.68%), Postives = 115/229 (50.22%), Query Frame = 0


Query: 2   WAAFSSATALVRSIATKLL-----------AFVDSAFPSETKFVIAEQSPFAY--VFQAA 61
           +A+F++   L+RS+  +LL            +   +  S+TK VI E S FA   VFQAA
Sbjct: 19  YASFATTMMLIRSLTNELLPAKLISFSSIFVYFFGSISSQTKLVIEENSGFAMNEVFQAA 78

Query: 62  EIYLRPKIVQT--------------------DNQVIADEFETVPLRWQ-LISTGENN--- 121
           E YLR KI  +                     +Q I D FE + L+W+ L S  E N   
Sbjct: 79  EFYLRTKISPSIDTLKVTKTPRQKKVTLSIDKDQEIIDYFENIRLQWRFLCSVDERNGGG 138

Query: 122 ----RRFELTFPTKFSTLITDSYIPYLMVRA----EEKKIVVI---------PTTHYW-- 174
               R+FEL+FP KF   I D Y+PY++ RA    EE K+V I          +   W  
Sbjct: 139 SREKRQFELSFPKKFRDRIVDFYLPYVLRRAKEIKEENKVVKIFSQECQYDDDSGGNWGS 198

[Close]

BLAST of Sed0005818 vs. TAIR 10
Match: AT5G17740.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-17
Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 55  KIVQTDNQVIADEFETVPLRWQLISTGENN----------------RRFELTFPTKFSTL 114
           K+  +D +V++D +  + L+W+ ++  +NN                   EL+F  K   L
Sbjct: 105 KLYLSDGEVVSDVYNGIKLKWRFLARNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDL 164

Query: 115 ITDSYIPYLMVRAEE----KKIVVIPTTHY----WDLID---PPTLDTLGMHPGLKRNII 174
           + +SYIPY+  +A+E    ++I+ +    +    W  ++   P T DT+ M+  LKR++I
Sbjct: 165 VVNSYIPYVESKAKEVNNKRRILKMHCYSHMAQTWQSVNFKHPSTFDTMAMNDDLKRSMI 224

[Close]

BLAST of Sed0005818 vs. TAIR 10
Match: AT3G28610.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 56  IVQTDNQVIADEFETVPLRWQLISTGENNRRFELTFPTKFSTLITDSYIPYLM-----VR 115
           +++ D   + DE+E + + W++ +     +  +LTF  +   ++T+SYI Y++     + 
Sbjct: 107 VLKRDETKVRDEYEGIRVWWEMETDSAGYKTLKLTFHRRSRDIVTNSYIKYVVEEGKSID 166

Query: 116 AEEKKIVVI---PTTH-------YWDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGR 174
           A+ KK+ +    P++H       +W  ID   P T +TL M P  K  I+ DL  F  G+
Sbjct: 167 AKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGK 226

[Close]

BLAST of Sed0005818 vs. TAIR 10
Match: AT3G28600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 51/181 (28.18%), Postives = 83/181 (45.86%), Query Frame = 0


Query: 30  ETKFVIAEQSPFAYVFQAAEIYLRPK-------------------IVQTDNQVIADEFET 89
           E  F   E   F + F A E YL  K                   +++ D   + DE+E 
Sbjct: 63  EISFSQYEDYQFNHAFAAIETYLGAKATDKAKHLRASQVKESKGLVLKRDETKVRDEYEG 122

Query: 90  VPLRWQLISTGENNRRFELTFPTKFSTLITDSYIPYLM-----VRAEEKKIVVI---PTT 149
             + W++ +     R F+LTF  +   ++TDSYI Y+      ++A+ K++ +    P++
Sbjct: 123 GTVWWEMETDSTGYRTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSS 182

Query: 150 H-------YWDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGRDLYRKIGEPWRRSYL 174
           H       +W  ID   P +  TL M    K  I+ DL  F  G++ Y+KIG+ W+R YL
Sbjct: 183 HWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYL 242

[Close]

BLAST of Sed0005818 vs. TAIR 10
Match: AT2G18190.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-14
Identity = 50/175 (28.57%), Postives = 78/175 (44.57%), Query Frame = 0


Query: 44  VFQAAEIYLRPK--------------------IVQTDNQVIADEFETVPLRWQLI----- 103
           VF AAE+YLR K                    I     + I D FE   LRW  +     
Sbjct: 75  VFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWTYVESENE 134

Query: 104 STGENNRRFELTFPTKFSTLITDSYIPYLMVRAEEKKIVVIPTTHY-------------- 163
           ++ +  R +ELTF  K    + +SY+ +++  +EE K  +     Y              
Sbjct: 135 ASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMA 194

Query: 164 ---WDLID---PPTLDTLGMHPGLKRNIITDLDLFVGGRDLYRKIGEPWRRSYLV 174
              W  I+   P T +TL M PG K+ II D++ F+  R+ Y+++G+ W+R YL+
Sbjct: 195 GAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLL 249

[Close]

BLAST of Sed0005818 vs. TAIR 10
Match: AT3G50930.1 (cytochrome BC1 synthesis )

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-14
Identity = 62/204 (30.39%), Postives = 91/204 (44.61%), Query Frame = 0


Query: 27  FPSETKFVIAEQSPFAY--VFQAAEIYLRPKI---------------------VQTDNQV 86
           F S+   +I E   FA+  VF+AAE YL  KI                     V+ D +V
Sbjct: 102 FSSQMTIIIEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEV 161

Query: 87  IADEFETVPLRW----------------QLISTGENN-RRFELTFPTKFSTLITDSYIPY 146
           + D +  V  +W                 L ST  +  R FEL F  KF  +  +SY+P+
Sbjct: 162 V-DTYNGVKFQWILHCRHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPF 221

Query: 147 LMVRA----EEKKIVVI----PTTHYWDLID---------PPTLDTLGMHPGLKRNIITD 174
           ++ RA    +EKK + I    P   Y +  D         P T  TL M   +K +++ D
Sbjct: 222 MVKRATLMKQEKKTLKIFTLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMED 281

The following BLAST results are available for this feature:

BLAST of Sed0005818 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12592.1	5.8e-23	36.52	AAA-ATPase [Cucumis melo var. makuwa]	[more]
XP_008440759.1	5.8e-23	36.52	PREDICTED: AAA-ATPase At2g18193-like [Cucumis melo]	[more]
KAA0025718.1	5.8e-23	36.52	AAA-ATPase [Cucumis melo var. makuwa]	[more]
XP_022132942.1	3.8e-22	38.26	AAA-ATPase At2g18193-like, partial [Momordica charantia]	[more]
XP_038877872.1	8.4e-22	35.65	AAA-ATPase At2g18193-like [Benincasa hispida]	[more]

BLAST of Sed0005818 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN77	1.2e-15	30.14	AAA-ATPase At5g17740 OS=Arabidopsis thaliana OX=3702 GN=At5g17740 PE=3 SV=1	[more]
Q9LJJ5	3.0e-14	30.88	AAA-ATPase At3g28610 OS=Arabidopsis thaliana OX=3702 GN=At3g28610 PE=2 SV=1	[more]
F4J0C0	1.9e-13	28.18	AAA-ATPase At3g28600 OS=Arabidopsis thaliana OX=3702 GN=At3g28600 PE=2 SV=1	[more]
F4IQG2	5.7e-13	28.57	AAA-ATPase At2g18190 OS=Arabidopsis thaliana OX=3702 GN=At2g18190 PE=2 SV=1	[more]
Q9FN75	5.7e-13	27.33	AAA-ATPase At5g17760 OS=Arabidopsis thaliana OX=3702 GN=At5g17760 PE=3 SV=1	[more]

BLAST of Sed0005818 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CMN5	2.8e-23	36.52	AAA-ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001760 PE...	[more]
A0A5A7SHS5	2.8e-23	36.52	AAA-ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002150 PE...	[more]
A0A1S3B2H6	2.8e-23	36.52	AAA-ATPase At2g18193-like OS=Cucumis melo OX=3656 GN=LOC103485078 PE=3 SV=1	[more]
A0A6J1BV86	1.8e-22	38.26	AAA-ATPase At2g18193-like OS=Momordica charantia OX=3673 GN=LOC111005662 PE=3 SV...	[more]
A0A0A0KGJ8	1.2e-21	36.68	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504460 PE=3 SV...	[more]

BLAST of Sed0005818 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17740.1	8.7e-17	30.14	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G28610.1	2.1e-15	30.88	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G28600.1	1.4e-14	28.18	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G18190.1	4.0e-14	28.57	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G50930.1	4.0e-14	30.39	cytochrome BC1 synthesis	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23070:SF140	BNAA06G25360D PROTEIN	coord: 3..173
None	No IPR available	PANTHER	PTHR23070	BCS1 AAA-TYPE ATPASE	coord: 3..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005818.1	Sed0005818.1	mRNA