Sed0005774 (gene) Chayote v1

Overview


Name	Sed0005774
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	LG08: 1778573 .. 1781679 (+)
RNA-Seq Expression	Sed0005774
Synteny	Sed0005774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAATGAATTTTCAGATTTTGTAGTTGACGATTTGCGTAAAGGCCGAAGCATGGCGAAGAACAAATGGAAAGTTGATGATGTTGAGTCATTTAAGAAACGAACCTATATTGTACAAGAGAGTGAATATGGGCCTAGTGAATCAGAAGCGACAGGAGAAAGAATGAGACATTATTCCTTGAAGAGCTCGATCAAGAGTTCAATCGACGAAGAGTTGCCTAAGCTTGTTGTTTTCCTTCAGGAAACCAACTATGGATTTGTGAAAGACATATGCATTGACAAGGTAGTGACTTCACGTGAAAAGTGCTTTGAGGAGAATTGTGACACAGAAAATGGTTGTGTCCCTAGCACGCTTAAATATAAAGTAGAAGAAAGCGAAGGTGAATCAACTGAAGAATCCGAGGACTTGGATTCGTCAATTTCAAGTACTGAATCAACATGGATCGTTAAGAAGGACTTATTTAACGAAGTAGATGAGAAACAAAAGGTTCATTCTGGGGCCATAGGTGAAATCAATGAGAAAGTTGTTCCTAAATTGTATCTTGATAGAAAGGTGAGAGTAAAGTTAGCTTAGCGTACTTCTTCATGCGCCCGTGTGTGAGTGTTTTTTTTTTATATATTTTCATAATCGTTGAAATGTCTTGAACTATGTTGCGCTATGGACATTCAATATGTTAGGGTTCAGGGAAAATACCTCCAAAACCCACAAAAATACGTTAGGCTTTTATGAGAGAAGCACTATATAAACTCTCTTAAAACTTTCGCCCCCTTTACCTAGTATTTGTATTCTTATCTCTTAATAAAACAGTCTCTCTCATCTGCCCATGAACGTAGCTAACACGACGTTAGTGAACTACATAAATTTTTGTCGCGTTTTCTTATTCTTGTCTTGATTGTTGTTGACAATTATTTCTTGACTGGTTGACTTAATTTGATTGTCTGGAAACTTTTTAGGTTACAGGTAAAAGGGTAGCAGCCTCTACCAACTCTGTTGCAATATCACTGGCTAAGATACTTGATGAAAACAAACACAGAGGAAAAGGAGTTGCTGGAAGCAACATTGAACAGAGGAGTGTTTTTTGCAACTCCGGTTTATCAGCAATCACAATTGGGGGCGGAGGCAGCGGCTGCGGCTGGACAGGAGGTTATGGACAATGTCATGACTGTGGAAGCACATCTGCAGCCGAGGGCTATGCACCGAAAAACCAAACGAAACTATACCGAAGCCATTTTGGCTTTGTTTATCAGTGTGAAGGTGGTTCCTCTGCAGTTGATCCTGCTTTCAGCACAGTCAGAAGACCCTCATTGTCATCTTATTTGAGCAGTGCATCACTTCGGTCGAATAGCAGCACTAACAGCTCACATTCTTTTGCTTTTCCAATGTAAATGCTAGTCTTCCTGTTAGCTTTTCCTACCATATTTGTTGAAAATTAAAACATATAGCTCATTGTCTTTGCCTTTCTTGAATTCACAGTTTGCAGGCAGAATGGAACGGAAGTCCTGTAAGAATGGCAAGCGCTGTTCTGGTGCGAACGCGATGGCAGCAACTGTGGAGGCTATGTCTTCCTTGCTGTAATTTTTTAGCATCTTATTACCCAATCTGTCAGTGCTCTCCAATTTTTGTTTTGTTTTTTCTCACTTGGGTTTATTATCATTTTGTATAAGATACGTAGAACAGCTCTGAGCCCAAAAATTTAAGTATGAATACATTATTTGCGTTCTCACTTTTAGCCTCAGACATTAGCTTAGACTATAAATACCAATAAAAAAATCATTAAGACACTTAGGAGTTGACTTACTAGTCTAGTATTATGTTAAAAACCACTTAACTCAAAAGTCAATAAGGAAAAAACTCCATTGGTAGGATATGCCTAGCTCAATGGTTAAAAAATAAATCAAGAAGGTTAAAGTCCCGTTTGATAACCATTTTGTTTTTGGTTTTTAGTTTTTAAAAATTAAGTCTAGAACAACTCTAATTATGTTTTTTTTTTACTTTGATATTTATATCTTACCTATATTTTTTAAAACCAAACAAAATTTGAAAACTAAAGCCCACTTTGATAACCATATGCTTTTTTGTTTTGGGTTTTTGAAATTGAAGCTTGAATTCTCTATATTCTCTTGATGAAATATATGAATCCAAACCAAATTCTGTAAATCAAAACAAGTATTTGGAAGCTATTTTTTTAGCTTTCAAATTTTGGTTTGGATTTTAAAAACACAAGTAGAGTGCATATATCAAAGTAATGAAAATCATGTGTTGGAGTAGAAGTTATAGGCTTACATTTCAAAAACTAAAAACAAAAAATTAAATGGTTATCAAACGGAACCTAACAAAGTTGCTTCCAAAAACTTATTTTGGTTTTTGAGTTTGGTTAGGATTGAACTACTTTATTAATGTAAGATGAAACTATTTGTAGAGAATTTGAGTCGAGCTTAAATCTCAAAACAAAAGTATTACAACTGAACCTACCCCTTCCATTTAGTACTTGACACATCATAATATACAATTTAATTTAATAGACCCAAACAGTTTTTAATGCTATTGATGTGGTAAGCTATGAAAATATGCAGTACTAAAATTTTTCTCTCTGTTAGGTGAGTTTTTATTTTGAGAAAAATTTACCTAACTCATAGGGAGCCATGTGAGAGAAATGTGTTAAAAAATCATAATTTAGTTTTTAAAAAATACAAAAAATAAACTTGGCCTATTTTAAATCTCACACTTAGTAAGCTTTATAGTCAAAATATACCTACAAGTTAGTAAGTTCCCCTTTTATTTTTACTGTGAGGTTTTCTACTGTGTTTTCTAGATGATAACCCAAATTTCTATGGAGTTTCTACTGTGTAATCACTTTACTTTACGCTTAAACTCAAAAAAAAGTTTTTTTTATTAGTAAGATAGCATTAAAGTATCACGTTCTAAGCTTAGTCATTATCATTTCATATTAATGATCTATCCGTTAGACCTCTTATATGGGTAATATTGGGACCCCACACATGAAGCGATTGTTAAGGAGTAAATTAATACATTAAACTCATACGTCTGAATCTGATACTGATTTGTTTGTTGGTTTGTTTTTTTGATTTTTTTTTAGAATCTGA

mRNA sequence

ATGAGGAATGAATTTTCAGATTTTGTAGTTGACGATTTGCGTAAAGGCCGAAGCATGGCGAAGAACAAATGGAAAGTTGATGATGTTGAGTCATTTAAGAAACGAACCTATATTGTACAAGAGAGTGAATATGGGCCTAGTGAATCAGAAGCGACAGGAGAAAGAATGAGACATTATTCCTTGAAGAGCTCGATCAAGAGTTCAATCGACGAAGAGTTGCCTAAGCTTGTTGTTTTCCTTCAGGAAACCAACTATGGATTTGTGAAAGACATATGCATTGACAAGGTAGTGACTTCACGTGAAAAGTGCTTTGAGGAGAATTGTGACACAGAAAATGGTTGTGTCCCTAGCACGCTTAAATATAAAGTAGAAGAAAGCGAAGGTGAATCAACTGAAGAATCCGAGGACTTGGATTCGTCAATTTCAAGTACTGAATCAACATGGATCGTTAAGAAGGACTTATTTAACGAAGTAGATGAGAAACAAAAGGTTCATTCTGGGGCCATAGGTGAAATCAATGAGAAAGTTGTTCCTAAATTGTATCTTGATAGAAAGGTTACAGGTAAAAGGGTAGCAGCCTCTACCAACTCTGTTGCAATATCACTGGCTAAGATACTTGATGAAAACAAACACAGAGGAAAAGGAGTTGCTGGAAGCAACATTGAACAGAGGAGTGTTTTTTGCAACTCCGGTTTATCAGCAATCACAATTGGGGGCGGAGGCAGCGGCTGCGGCTGGACAGGAGGTTATGGACAATGTCATGACTGTGGAAGCACATCTGCAGCCGAGGGCTATGCACCGAAAAACCAAACGAAACTATACCGAAGCCATTTTGGCTTTGTTTATCAGTGTGAAGGTGGTTCCTCTGCAGTTGATCCTGCTTTCAGCACAGTCAGAAGACCCTCATTGTCATCTTATTTGAGCAGTGCATCACTTCGGTCGAATAGCAGCACTAACAGCTCACATTCTTTTGCTTTTCCAATCTCATTGTCTTTGCCTTTCTTGAATTCACAGTTTGCAGGCAGAATGGAACGGAAGTCCTGTAAGAATGGCAAGCGCTGTTCTGGTGCGAACGCGATGGCAGCAACTGTGGAGGCTATGTCTTCCTTGCTAATCTGA

Coding sequence (CDS)

ATGAGGAATGAATTTTCAGATTTTGTAGTTGACGATTTGCGTAAAGGCCGAAGCATGGCGAAGAACAAATGGAAAGTTGATGATGTTGAGTCATTTAAGAAACGAACCTATATTGTACAAGAGAGTGAATATGGGCCTAGTGAATCAGAAGCGACAGGAGAAAGAATGAGACATTATTCCTTGAAGAGCTCGATCAAGAGTTCAATCGACGAAGAGTTGCCTAAGCTTGTTGTTTTCCTTCAGGAAACCAACTATGGATTTGTGAAAGACATATGCATTGACAAGGTAGTGACTTCACGTGAAAAGTGCTTTGAGGAGAATTGTGACACAGAAAATGGTTGTGTCCCTAGCACGCTTAAATATAAAGTAGAAGAAAGCGAAGGTGAATCAACTGAAGAATCCGAGGACTTGGATTCGTCAATTTCAAGTACTGAATCAACATGGATCGTTAAGAAGGACTTATTTAACGAAGTAGATGAGAAACAAAAGGTTCATTCTGGGGCCATAGGTGAAATCAATGAGAAAGTTGTTCCTAAATTGTATCTTGATAGAAAGGTTACAGGTAAAAGGGTAGCAGCCTCTACCAACTCTGTTGCAATATCACTGGCTAAGATACTTGATGAAAACAAACACAGAGGAAAAGGAGTTGCTGGAAGCAACATTGAACAGAGGAGTGTTTTTTGCAACTCCGGTTTATCAGCAATCACAATTGGGGGCGGAGGCAGCGGCTGCGGCTGGACAGGAGGTTATGGACAATGTCATGACTGTGGAAGCACATCTGCAGCCGAGGGCTATGCACCGAAAAACCAAACGAAACTATACCGAAGCCATTTTGGCTTTGTTTATCAGTGTGAAGGTGGTTCCTCTGCAGTTGATCCTGCTTTCAGCACAGTCAGAAGACCCTCATTGTCATCTTATTTGAGCAGTGCATCACTTCGGTCGAATAGCAGCACTAACAGCTCACATTCTTTTGCTTTTCCAATCTCATTGTCTTTGCCTTTCTTGAATTCACAGTTTGCAGGCAGAATGGAACGGAAGTCCTGTAAGAATGGCAAGCGCTGTTCTGGTGCGAACGCGATGGCAGCAACTGTGGAGGCTATGTCTTCCTTGCTAATCTGA

Protein sequence

MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYSLKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLKYKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEINEKVVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAITIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAFSTVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMERKSCKNGKRCSGANAMAATVEAMSSLLI

Homology

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BLAST of Sed0005774 vs. NCBI nr
Match: XP_031742010.1 (uncharacterized protein LOC105434534 [Cucumis sativus] >XP_031742012.1 uncharacterized protein LOC105434534 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-100
Identity = 215/333 (64.56%), Postives = 255/333 (76.58%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VVD+++K R + KNK KVDD+E FK+R Y+VQES+ GPSESEA+G+RM  YS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
            KSS+KSSI++ELP+LVVFLQETNY FVKDICID+ VTSREKCFEE+C TEN  VP  LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
           Y   E++ ESTEES D +S+ISST+ST  + K+ FNEV EKQK HS AI E+     ++K
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKN-FNEVYEKQKFHSDAIDEVPSEVPHKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGK+ A+STNS+AISL KILDENK++GK VA SNIE  S+  NSGLS  
Sbjct: 181 SVPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
           T+ GG S   WT G G C DC   + AE Y P+N+T LY SH      C   SSA DP+ 
Sbjct: 241 TVEGGSS--NWTAGCGHCRDC---TMAEYYTPENETGLYSSH------C---SSAGDPSL 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPI 329
           ++VRRPSLSSYL S SLRSNSSTNSSHSFAFPI
Sbjct: 301 NSVRRPSLSSYLGSGSLRSNSSTNSSHSFAFPI 318

[Close]

BLAST of Sed0005774 vs. NCBI nr
Match: XP_008453313.1 (PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo] >XP_008453315.1 PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo] >XP_008453316.1 PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-100
Identity = 212/332 (63.86%), Postives = 254/332 (76.51%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VVD+++K R + KNK KVDD+E FK+R Y+VQE + GPSESEA+G+RM  YS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
            KSS+KSSI++ELP+LVVFLQETNY FVKDICID+ VTSR+KCF+E+C TEN  VP  LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEINE----KV 180
           Y   E++ ESTEES D DS+ISS EST  ++++ FNEV EKQKVHS AI   +E    K 
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEEN-FNEVYEKQKVHSDAIDVPSEVPRKKS 180

Query: 181 VPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAIT 240
           VPKL+LDRKVTGK+ A+STNS+AISL KILDEN+++GK VA SNIE    FCNSGLS  T
Sbjct: 181 VPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNIEHGKNFCNSGLSQST 240

Query: 241 IGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAFS 300
           I GG S   WT G G CHDC + +  + Y P+N+T LY SH      C   SSA DP+ +
Sbjct: 241 IEGGSS--NWTAGCGHCHDC-TMAEYKDYTPENETGLYSSH------C---SSAGDPSLN 300

Query: 301 TVRRPSLSSYLSSASLRSNSSTNSSHSFAFPI 329
           +VRRPS+SSYL S SLRSNSSTNSSHSFAFPI
Sbjct: 301 SVRRPSMSSYLGSGSLRSNSSTNSSHSFAFPI 319

[Close]

BLAST of Sed0005774 vs. NCBI nr
Match: XP_022135556.1 (uncharacterized protein LOC111007481 [Momordica charantia])

HSP 1 Score: 372.9 bits (956), Expect = 3.3e-99
Identity = 213/352 (60.51%), Postives = 254/352 (72.16%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           M NEFS  VVD+L+K R   KNKWKVD VESF++R+Y+VQES+ G  ESE +G+    + 
Sbjct: 1   MMNEFSSLVVDNLQKSRFTEKNKWKVDGVESFRRRSYMVQESDDGLGESEPSGDGRSRF- 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
              S  SSID+ELP+ VVFLQETNY FVKDICIDK  TS EKCFEE+CD ENG VP  LK
Sbjct: 61  ---SSMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
           Y +  S+G +TEESEDL+SSISS ES  +++KD FN+V+EK+KVH   I E+      +K
Sbjct: 121 YNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQR--SVFCNSGLS 240
            VPKL LDRKVTGK+ AASTNS+AISL+KILDENKH+GK  A SN E    S++CNS LS
Sbjct: 181 TVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLS 240

Query: 241 AITIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDP 300
              I GG S C      G CH+CGSTS  E YAP++Q   +RSH GFVYQ E GSS +DP
Sbjct: 241 MSKIRGGASSC------GHCHECGSTSIPENYAPEDQMGSHRSH-GFVYQREDGSSELDP 300

Query: 301 AFSTVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           AF+ VR+PSLSSYL S SLRSNSSTNSS SFAFPI      L +++ G  ER
Sbjct: 301 AFNPVRKPSLSSYLGSTSLRSNSSTNSSQSFAFPI------LQTEWNGSPER 335

[Close]

BLAST of Sed0005774 vs. NCBI nr
Match: XP_022969028.1 (uncharacterized protein LOC111468138 [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 5.3e-97
Identity = 217/350 (62.00%), Postives = 254/350 (72.57%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VV+++ K  SM KNK KVDDVESFK+R  IVQESE  P ESEA+G+RM  Y 
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRY- 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
              S  SSI++ELP+LVVFLQETNY FVKDICIDK  TS E+CFEENCDT+NG VP  LK
Sbjct: 61  ---SSTSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
             V  S+ E+TEESED++SSI ST+ST +V+K+L N+V+E QK    A  EI     N+K
Sbjct: 121 SNVAASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGKRVAAS+NS+AISL KILDENK +GKGVAGSNIE  +VF NSGLS  
Sbjct: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNIEHGNVFRNSGLSPS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
            +GG                 G TS A+ YAP+NQT  YRS +GFVYQ + GSS VDPAF
Sbjct: 241 GVGGS----------------GRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAF 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           +TVRRPS SSY+ S SL SN STNSSHSFAFPI      L +++ G  ER
Sbjct: 301 NTVRRPSFSSYVGSDSLGSNDSTNSSHSFAFPI------LQTEWNGSPER 324

[Close]

BLAST of Sed0005774 vs. NCBI nr
Match: XP_023531769.1 (uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-97
Identity = 217/350 (62.00%), Postives = 255/350 (72.86%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VV+++ K  SM KNK KVDDVESFK+R  IVQESE  P ESEA+G+RM  Y 
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRY- 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
              S  SSI++ELP+LVVFLQETNY FVKDICIDK  TS E+CFEENCDT+NG VP  LK
Sbjct: 61  ---SSTSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
             V ES+ ++TEESEDL+SSI ST+ST +V+K+L N+V+E QK    A  +I     N+K
Sbjct: 121 SDVAESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGKRVAAS+NS+AISL KILDENK +GKGVAGSN E  +VF +SGLS  
Sbjct: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNEHGNVFHDSGLSPS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
            +GGG                G TS AE YAP+NQT  YRS +GFVYQ + GSS VDPAF
Sbjct: 241 GVGGG----------------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAF 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           +TVRRPS SSY+ S SL SN STNSSHSFAFPI      L +++ G  ER
Sbjct: 301 NTVRRPSFSSYVGSDSLGSNDSTNSSHSFAFPI------LQTEWNGSPER 324

[Close]

BLAST of Sed0005774 vs. ExPASy TrEMBL
Match: A0A0A0LRX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015630 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 5.0e-101
Identity = 215/333 (64.56%), Postives = 255/333 (76.58%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VVD+++K R + KNK KVDD+E FK+R Y+VQES+ GPSESEA+G+RM  YS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
            KSS+KSSI++ELP+LVVFLQETNY FVKDICID+ VTSREKCFEE+C TEN  VP  LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
           Y   E++ ESTEES D +S+ISST+ST  + K+ FNEV EKQK HS AI E+     ++K
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKN-FNEVYEKQKFHSDAIDEVPSEVPHKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGK+ A+STNS+AISL KILDENK++GK VA SNIE  S+  NSGLS  
Sbjct: 181 SVPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNIEHGSICRNSGLSQS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
           T+ GG S   WT G G C DC   + AE Y P+N+T LY SH      C   SSA DP+ 
Sbjct: 241 TVEGGSS--NWTAGCGHCRDC---TMAEYYTPENETGLYSSH------C---SSAGDPSL 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPI 329
           ++VRRPSLSSYL S SLRSNSSTNSSHSFAFPI
Sbjct: 301 NSVRRPSLSSYLGSGSLRSNSSTNSSHSFAFPI 318

[Close]

BLAST of Sed0005774 vs. ExPASy TrEMBL
Match: A0A1S3BVX8 (uncharacterized protein LOC103494068 OS=Cucumis melo OX=3656 GN=LOC103494068 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 2.5e-100
Identity = 212/332 (63.86%), Postives = 254/332 (76.51%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VVD+++K R + KNK KVDD+E FK+R Y+VQE + GPSESEA+G+RM  YS
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
            KSS+KSSI++ELP+LVVFLQETNY FVKDICID+ VTSR+KCF+E+C TEN  VP  LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEINE----KV 180
           Y   E++ ESTEES D DS+ISS EST  ++++ FNEV EKQKVHS AI   +E    K 
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEEN-FNEVYEKQKVHSDAIDVPSEVPRKKS 180

Query: 181 VPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAIT 240
           VPKL+LDRKVTGK+ A+STNS+AISL KILDEN+++GK VA SNIE    FCNSGLS  T
Sbjct: 181 VPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNIEHGKNFCNSGLSQST 240

Query: 241 IGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAFS 300
           I GG S   WT G G CHDC + +  + Y P+N+T LY SH      C   SSA DP+ +
Sbjct: 241 IEGGSS--NWTAGCGHCHDC-TMAEYKDYTPENETGLYSSH------C---SSAGDPSLN 300

Query: 301 TVRRPSLSSYLSSASLRSNSSTNSSHSFAFPI 329
           +VRRPS+SSYL S SLRSNSSTNSSHSFAFPI
Sbjct: 301 SVRRPSMSSYLGSGSLRSNSSTNSSHSFAFPI 319

[Close]

BLAST of Sed0005774 vs. ExPASy TrEMBL
Match: A0A6J1C133 (uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007481 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.6e-99
Identity = 213/352 (60.51%), Postives = 254/352 (72.16%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           M NEFS  VVD+L+K R   KNKWKVD VESF++R+Y+VQES+ G  ESE +G+    + 
Sbjct: 1   MMNEFSSLVVDNLQKSRFTEKNKWKVDGVESFRRRSYMVQESDDGLGESEPSGDGRSRF- 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
              S  SSID+ELP+ VVFLQETNY FVKDICIDK  TS EKCFEE+CD ENG VP  LK
Sbjct: 61  ---SSMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
           Y +  S+G +TEESEDL+SSISS ES  +++KD FN+V+EK+KVH   I E+      +K
Sbjct: 121 YNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQR--SVFCNSGLS 240
            VPKL LDRKVTGK+ AASTNS+AISL+KILDENKH+GK  A SN E    S++CNS LS
Sbjct: 181 TVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLS 240

Query: 241 AITIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDP 300
              I GG S C      G CH+CGSTS  E YAP++Q   +RSH GFVYQ E GSS +DP
Sbjct: 241 MSKIRGGASSC------GHCHECGSTSIPENYAPEDQMGSHRSH-GFVYQREDGSSELDP 300

Query: 301 AFSTVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           AF+ VR+PSLSSYL S SLRSNSSTNSS SFAFPI      L +++ G  ER
Sbjct: 301 AFNPVRKPSLSSYLGSTSLRSNSSTNSSQSFAFPI------LQTEWNGSPER 335

[Close]

BLAST of Sed0005774 vs. ExPASy TrEMBL
Match: A0A6J1HZT3 (uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 217/350 (62.00%), Postives = 254/350 (72.57%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VV+++ K  SM KNK KVDDVESFK+R  IVQESE  P ESEA+G+RM  Y 
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRY- 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
              S  SSI++ELP+LVVFLQETNY FVKDICIDK  TS E+CFEENCDT+NG VP  LK
Sbjct: 61  ---SSTSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
             V  S+ E+TEESED++SSI ST+ST +V+K+L N+V+E QK    A  EI     N+K
Sbjct: 121 SNVAASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGKRVAAS+NS+AISL KILDENK +GKGVAGSNIE  +VF NSGLS  
Sbjct: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNIEHGNVFRNSGLSPS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
            +GG                 G TS A+ YAP+NQT  YRS +GFVYQ + GSS VDPAF
Sbjct: 241 GVGGS----------------GRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAF 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           +TVRRPS SSY+ S SL SN STNSSHSFAFPI      L +++ G  ER
Sbjct: 301 NTVRRPSFSSYVGSDSLGSNDSTNSSHSFAFPI------LQTEWNGSPER 324

[Close]

BLAST of Sed0005774 vs. ExPASy TrEMBL
Match: A0A6J1F648 (uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC111441174 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 9.7e-97
Identity = 215/350 (61.43%), Postives = 254/350 (72.57%), Query Frame = 0


Query: 1   MRNEFSDFVVDDLRKGRSMAKNKWKVDDVESFKKRTYIVQESEYGPSESEATGERMRHYS 60
           MRNEFSD VV+++ K  SM KNK  VDDVESFK+R  IVQESE  P ESEA+G+RM  YS
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  LKSSIKSSIDEELPKLVVFLQETNYGFVKDICIDKVVTSREKCFEENCDTENGCVPSTLK 120
                 SSI++ELP+LVVFLQETNY FVKDICIDK  TS E+CFEENCDT+NG VP  LK
Sbjct: 61  -----SSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLK 120

Query: 121 YKVEESEGESTEESEDLDSSISSTESTWIVKKDLFNEVDEKQKVHSGAIGEI-----NEK 180
             V ES+ E+TEESED++SSI ST+ST +V+K+L N+V+E QK    A  +I     N+K
Sbjct: 121 SNVAESDIETTEESEDVESSIMSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKK 180

Query: 181 VVPKLYLDRKVTGKRVAASTNSVAISLAKILDENKHRGKGVAGSNIEQRSVFCNSGLSAI 240
            VPKL+LDRKVTGKRVAAS+NS+AISL KILDENK +GKGVAGSN E+ +VF +SGL   
Sbjct: 181 SVPKLHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNNERGNVFHDSGLPPS 240

Query: 241 TIGGGGSGCGWTGGYGQCHDCGSTSAAEGYAPKNQTKLYRSHFGFVYQCEGGSSAVDPAF 300
            +GGG                G TS AE YAP+NQT  YRS +GFVYQ + GSS VDPAF
Sbjct: 241 GVGGG----------------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAF 300

Query: 301 STVRRPSLSSYLSSASLRSNSSTNSSHSFAFPISLSLPFLNSQFAGRMER 346
           +TVRRPS SSY+ S SL SN STNSSHSFAFPI      L +++ G  ER
Sbjct: 301 NTVRRPSFSSYVGSDSLGSNDSTNSSHSFAFPI------LQTEWNGSPER 323

The following BLAST results are available for this feature:

BLAST of Sed0005774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742010.1	1.0e-100	64.56	uncharacterized protein LOC105434534 [Cucumis sativus] >XP_031742012.1 uncharact...	[more]
XP_008453313.1	5.1e-100	63.86	PREDICTED: uncharacterized protein LOC103494068 [Cucumis melo] >XP_008453315.1 P...	[more]
XP_022135556.1	3.3e-99	60.51	uncharacterized protein LOC111007481 [Momordica charantia]	[more]
XP_022969028.1	5.3e-97	62.00	uncharacterized protein LOC111468138 [Cucurbita maxima]	[more]
XP_023531769.1	6.9e-97	62.00	uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0005774 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRX2	5.0e-101	64.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015630 PE=4 SV=1	[more]
A0A1S3BVX8	2.5e-100	63.86	uncharacterized protein LOC103494068 OS=Cucumis melo OX=3656 GN=LOC103494068 PE=...	[more]
A0A6J1C133	1.6e-99	60.51	uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1HZT3	2.6e-97	62.00	uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138...	[more]
A0A6J1F648	9.7e-97	61.43	uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]

BLAST of Sed0005774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33914:SF4	SUBFAMILY NOT NAMED	coord: 7..328
IPR040378	Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE	PANTHER	PTHR33914	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN	coord: 7..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005774.1	Sed0005774.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009786	regulation of asymmetric cell division