Sed0005747 (gene) Chayote v1

Overview


Name	Sed0005747
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box domain-containing protein
Location	LG06: 31562616 .. 31564293 (-)
RNA-Seq Expression	Sed0005747
Synteny	Sed0005747

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCCAAAAATGGAAGAAGAAGAAGAAGAAATGGAGTTTCTCAATGATAATGACAGAATCAGCCTTCTACCCGATTCTCTTCTCCTCCACATTCTCTCCTCATTGAACACGAAGGGGGTTGTTCAGACCTGTGTGATTTCAAAGCGATGGAAAACCCTCTGGACTCGGATTCCATCTCTCAACTTCGATGCCAATTCCAATCCCTATATGGGGGAGAGTTCCCCCACCATCGAGGAAAAATCAAGAACGTTCAAGAAATTCGTCGCCAGATTCGTATCTCAACATCAAGGTACGCACATTCGAAACCTCTATCACTTTGGATGTACCAACGAGCTGTCGTTGATTGATTTCTTGATAAGATACGCACAGCGCTGTAATGTTCAACAACTCAGCATCAATACTCGTTACATGGGTTATTATGACTGGATGTATTTGTATTCCTCTTGTTCTTCGCTCCTTTCTCTGACCATGATTTGTGGGTTTGTGGACGATTGGGGAGCTTTGGTTTCGCCCTCCTTGAAGGTTTTAGAGATTGATTGTGGATGGACGAATGGGACTTTTCAACAAACTCCACATACCGGGATTAAGACCTTTTCGGGGTGCCCAAATTTGGAATCCTTGGTTTTGGTTGATTATCATGTTCATACTCTCACTATTTGTGCTCCTAAACTTAAGAATTTGGAATTATGTGCTTTTCTGGGAAGGTGGATGTTTTTATCCGCAAGTTGAATTGCTCACACCATGTCTTGAAAACGTCTATTTTAGCAACGTTTTGCCCACTGTCAAGTCCACCAGTTCCGAATTTTTGTCCATACACAAAGTTAATGTTGAAGTTGAACTCTCTGGTATTAGAGGTAGTCGCACTTGCAGGCAAAAGTCAGCTGCGAGCCTCTTTGAGTTACTTGGAGTGTTTCATAATGCAAGGTCTTTAACCCTGCCTTTAAAGGAAATGCAGGTATCGATAAACTAGTTCCGCCCTATTTGATAACCATTTGAGTTTTTGTAGAATTTAGCCTATTTCAGTATCATGATTTTCATCTCATTTAAGGAAGCATTGGAATTTCTAGCCAAATTCTTAAAACAAAAATAAGTTAATAGTTACTTTTTTTAGTTTTCAAAATGTGACATGGTTGTTATAAATATAGGCAAAAAAATGGATAACACAACAATGCAATAGATTTATAGGGCTGAAGGTGGTTTGAACAACCTCCTTCGTGTTCAATTGTAACTACTGTTTGTGTACTAATTTCTCAGGTCTACAAGGTGGTTTCATCGGTTCCTTCTTTGAGTGGAATTACGTTTCATAATTTGAAACATTTGAAGATTAAAACAGGGACAACTAAGCGGATGAAAAGGCTAGACATGCCGATTAGTTTAATGGCGCTAAAATGCCCCAATTTAGAAACGTTGGATGTTATCAATGAGGTAACCATGCATGTCTAAGTTTTTTTCTGTTATATATAAAAGTAGGAATTAATTATTTTATTAGGTAATTGCAGTTTCTTTCATTTTTCAACGTCTAACCTTTTTGTCAACTGTATATACTTTAACCAGTTGAGCTGTGTTCGGGTTGACCATTATTTCAATTGTTTGTATCTTTAATGTATAAATTCTTCTCATTCATTTACAGGCCAACTATAGTAGAGCTTTAACAGACGCTTGTTATGACTGA

mRNA sequence

ATGAAGAAGCCAAAAATGGAAGAAGAAGAAGAAGAAATGGAGTTTCTCAATGATAATGACAGAATCAGCCTTCTACCCGATTCTCTTCTCCTCCACATTCTCTCCTCATTGAACACGAAGGGGGTTGTTCAGACCTGTGTGATTTCAAAGCGATGGAAAACCCTCTGGACTCGGATTCCATCTCTCAACTTCGATGCCAATTCCAATCCCTATATGGGGGAGAGTTCCCCCACCATCGAGGAAAAATCAAGAACGTTCAAGAAATTCGTCGCCAGATTCGTATCTCAACATCAAGGTACGCACATTCGAAACCTCTATCACTTTGGATGTACCAACGAGCTGTCGTTGATTGATTTCTTGATAAGATACGCACAGCGCTGTAATGTTCAACAACTCAGCATCAATACTCGTTACATGGGTTATTATGACTGGATGTATTTGTATTCCTCTTGTTCTTCGCTCCTTTCTCTGACCATGATTTGTGGGTTTGTGGACGATTGGGGAGCTTTGGTTTCGCCCTCCTTGAAGGTTTTAGAGATTGATTGTGGATGGACGAATGGGACTTTTCAACAAACTCCACATACCGGGATTAAGACCTTTTCGGGGTGCCCAAATTTGGAATCCTTGGTTTTGGTTGATTATCATGTTCATACTCTCACTATTTGTGCTCCTAAACTTAAGAATTTGGAATTATTTGAATTGCTCACACCATGTCTTGAAAACGTCTATTTTAGCAACGTTTTGCCCACTGTCAAGTCCACCAGTTCCGAATTTTTGTCCATACACAAAGTTAATGTTGAAGTTGAACTCTCTGGTATTAGAGGTAGTCGCACTTGCAGGCAAAAGTCAGCTGCGAGCCTCTTTGAGTTACTTGGAGTGTTTCATAATGCAAGGTCTTTAACCCTGCCTTTAAAGGAAATGCAGGTGGTTTCATCGGTTCCTTCTTTGAGTGGAATTACGTTTCATAATTTGAAACATTTGAAGATTAAAACAGGGACAACTAAGCGGATGAAAAGGCTAGACATGCCGATTAGTTTAATGGCGCTAAAATGCCCCAATTTAGAAACGTTGGATGTTATCAATGAGGCCAACTATAGTAGAGCTTTAACAGACGCTTGTTATGACTGA

Coding sequence (CDS)

ATGAAGAAGCCAAAAATGGAAGAAGAAGAAGAAGAAATGGAGTTTCTCAATGATAATGACAGAATCAGCCTTCTACCCGATTCTCTTCTCCTCCACATTCTCTCCTCATTGAACACGAAGGGGGTTGTTCAGACCTGTGTGATTTCAAAGCGATGGAAAACCCTCTGGACTCGGATTCCATCTCTCAACTTCGATGCCAATTCCAATCCCTATATGGGGGAGAGTTCCCCCACCATCGAGGAAAAATCAAGAACGTTCAAGAAATTCGTCGCCAGATTCGTATCTCAACATCAAGGTACGCACATTCGAAACCTCTATCACTTTGGATGTACCAACGAGCTGTCGTTGATTGATTTCTTGATAAGATACGCACAGCGCTGTAATGTTCAACAACTCAGCATCAATACTCGTTACATGGGTTATTATGACTGGATGTATTTGTATTCCTCTTGTTCTTCGCTCCTTTCTCTGACCATGATTTGTGGGTTTGTGGACGATTGGGGAGCTTTGGTTTCGCCCTCCTTGAAGGTTTTAGAGATTGATTGTGGATGGACGAATGGGACTTTTCAACAAACTCCACATACCGGGATTAAGACCTTTTCGGGGTGCCCAAATTTGGAATCCTTGGTTTTGGTTGATTATCATGTTCATACTCTCACTATTTGTGCTCCTAAACTTAAGAATTTGGAATTATTTGAATTGCTCACACCATGTCTTGAAAACGTCTATTTTAGCAACGTTTTGCCCACTGTCAAGTCCACCAGTTCCGAATTTTTGTCCATACACAAAGTTAATGTTGAAGTTGAACTCTCTGGTATTAGAGGTAGTCGCACTTGCAGGCAAAAGTCAGCTGCGAGCCTCTTTGAGTTACTTGGAGTGTTTCATAATGCAAGGTCTTTAACCCTGCCTTTAAAGGAAATGCAGGTGGTTTCATCGGTTCCTTCTTTGAGTGGAATTACGTTTCATAATTTGAAACATTTGAAGATTAAAACAGGGACAACTAAGCGGATGAAAAGGCTAGACATGCCGATTAGTTTAATGGCGCTAAAATGCCCCAATTTAGAAACGTTGGATGTTATCAATGAGGCCAACTATAGTAGAGCTTTAACAGACGCTTGTTATGACTGA

Protein sequence

MKKPKMEEEEEEMEFLNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSPTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTNELSLIDFLIRYAQRCNVQQLSINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLELFELLTPCLENVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLTLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVINEANYSRALTDACYD

Homology

[Close]

BLAST of Sed0005747 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-76
Identity = 177/365 (48.49%), Postives = 230/365 (63.01%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS- 77
           ++DRISLLPDSLL HILS+ NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS 
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSF 74

Query: 78  --PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQL 137
                E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL
Sbjct: 75  NYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQL 134

Query: 138 SINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
            +NT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++ 
Sbjct: 135 CVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERA 194

Query: 198 PHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCLE 257
            + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L             ELLTP L+
Sbjct: 195 NYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTPTLK 254

Query: 258 NVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSL 317
            V F NVLP ++S  SEF  I KV+++++ S      +  Q+  +   +LL V HNA S 
Sbjct: 255 AVNFVNVLPVLES-DSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSF 314

Query: 318 TLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVI 366
           TLP+K  QV+SS   LS   FHN++HL++KT      K  D+ +  + LK P LET+ V+
Sbjct: 315 TLPMKATQVISSYKELS---FHNMRHLRLKT------KESDLLLKHL-LKAPKLETIVVL 365

[Close]

BLAST of Sed0005747 vs. NCBI nr
Match: XP_038890214.1 (F-box/LRR-repeat protein At3g26922-like [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 8.9e-76
Identity = 181/360 (50.28%), Postives = 221/360 (61.39%), Query Frame = 0


Query: 20  DRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDAN--SNPYMGESSP 79
           DRISLLPD LL HILS+LNTK VVQTCV+SKRWKTLWT IP+LNFD N  S+        
Sbjct: 5   DRISLLPDVLLHHILSTLNTKCVVQTCVLSKRWKTLWTHIPTLNFDYNSYSSSLSSFKDN 64

Query: 80  TIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQLSIN 139
             E K ++FK F+ R +S+H  T+I  L +    N  EL L++FLI YA   NVQQL IN
Sbjct: 65  DDEAKEKSFKYFIFRVLSKHCTTNIHKLTYTTSQNEDELVLVEFLICYAGSRNVQQLCIN 124

Query: 140 T-RYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQTPH 199
           T   +G YDW Y +S CSSL+ L M+C FV DWG L  PSLK+LEI+C W     ++  +
Sbjct: 125 TYDTIGIYDWNYCFSVCSSLIGLKMVCAFVHDWGVLAIPSLKILEIECDWYERD-KEANY 184

Query: 200 TGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCLENV 259
            GI  F GCPNLESLVLVDY   + TI APKLKNL+L             EL TP LE V
Sbjct: 185 KGITMFPGCPNLESLVLVDYLFESSTISAPKLKNLKLCASPRMELTFPEVELFTPTLETV 244

Query: 260 YFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLTL 319
            F NVLP VKS  SEF  IHKV+++++ S      +  QK  ++  ELL VFHNARS TL
Sbjct: 245 NFINVLPIVKS-DSEFSCIHKVDIQLKDSIFERVGSQTQKLKSNFRELLSVFHNARSFTL 304

Query: 320 PLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVINE 363
           PLK   V+S    L    FHN+ HL++KT  +  +           LK P L+T  V+NE
Sbjct: 305 PLKATLVISLYDEL---FFHNMSHLRLKTKESGLLLE-------HLLKAPKLKTFVVLNE 352

[Close]

BLAST of Sed0005747 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-75
Identity = 182/377 (48.28%), Postives = 232/377 (61.54%), Query Frame = 0


Query: 17  NDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDAN-SNPYMGES 76
           N  D+IS +PD +L  ILS+LNTK VVQTCV+SKRWK LWT IP+LNF  N  +  +   
Sbjct: 346 NREDKISHVPDCVLHEILSTLNTKFVVQTCVLSKRWKNLWTHIPTLNFHYNIYSSLLSSK 405

Query: 77  SPTIEEKSRTFKKFVARFVSQHQGTHIRNLYH--FGCTNELSLIDFLIRYAQRCNVQQLS 136
           +   E K R FK F+ R +S+H  T+I+ L +   G  +EL L++FLI YA   NVQQL 
Sbjct: 406 NEDEESKQRYFKYFIIRVLSKHCATNIQKLTYTSSGDEDELVLVEFLICYAGSHNVQQLC 465

Query: 137 INTRYMGYYD--WMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQ 196
           IN  Y+G  D  W Y +S+CSSL+ L MICGFVD+W  L  PSLK LEI   W +   ++
Sbjct: 466 INATYIGVDDHVWNYCFSTCSSLIRLKMICGFVDNWAFLALPSLKFLEIQWDWLHWD-EK 525

Query: 197 TPHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCL 256
             + G   F GCPNLESLV VDY   + TI APKL+NLEL             EL TP L
Sbjct: 526 ANYNGTTMFPGCPNLESLVFVDYLFESATISAPKLENLELCSFSDFGLTFPEVELFTPIL 585

Query: 257 ENVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRG--SRTCRQKSAASLFELLGVFHNA 316
           ++V F NVLP +KS  SEFL IHKVN+++E S      S   +QK  ++  ELL VFHNA
Sbjct: 586 KSVNFINVLPILKS-DSEFLCIHKVNIQLEDSVFEREYSGPNKQKFNSNFGELLRVFHNA 645

Query: 317 RSLTLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETL 375
           RS TLPLK  QVV S    +G++FHN++HL++KT  T  + +         LK PNLET 
Sbjct: 646 RSFTLPLKATQVVLS-NYFNGLSFHNIRHLRLKTNDTGILFK-------HLLKAPNLETF 705

[Close]

BLAST of Sed0005747 vs. NCBI nr
Match: XP_008459618.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-68
Identity = 162/353 (45.89%), Postives = 212/353 (60.06%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS- 77
           ++DRISLLPDSLL HILS+ NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS 
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSF 74

Query: 78  --PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQL 137
                E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL
Sbjct: 75  NYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQL 134

Query: 138 SINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
            +NT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++ 
Sbjct: 135 CVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERA 194

Query: 198 PHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLELFELLTPCLENVYFSNVLPTVK 257
            + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L                     
Sbjct: 195 NYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-------------------CA 254

Query: 258 STSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLTLPLKEMQVVSS 317
           S   E     KV+++++ S      +  Q+  +   +LL V HNA S TLP+K  QV+SS
Sbjct: 255 SHDMELTFPQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQVISS 314

Query: 318 VPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVINEANY 366
              LS   FHN++HL++KT      K  D+ +  + LK P LET+ V+NE  Y
Sbjct: 315 YKELS---FHNMRHLRLKT------KESDLLLKHL-LKAPKLETIVVLNEDIY 335

[Close]

BLAST of Sed0005747 vs. NCBI nr
Match: KAA0039267.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 3.4e-67
Identity = 155/309 (50.16%), Postives = 196/309 (63.43%), Query Frame = 0


Query: 19  NDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS-- 78
           +DRISLLPD+LL HILSS NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS  
Sbjct: 16  DDRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSFN 75

Query: 79  -PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQLS 138
               E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL 
Sbjct: 76  YDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQLC 135

Query: 139 INTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQTP 198
           INT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++  
Sbjct: 136 INTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERAN 195

Query: 199 HTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCLEN 258
           + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L             ELLTP L+ 
Sbjct: 196 YDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTPTLKA 255

Query: 259 VYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLT 311
           V F NVLP ++S  SEF  I KV+++++ S      +  Q+  +   +LL V HNA S T
Sbjct: 256 VNFVNVLPVLES-DSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFT 315

[Close]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot
Match: Q9LJF9 (F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana OX=3702 GN=At3g26920 PE=2 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 97/370 (26.22%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 16  LNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGES 75
           L++ DRIS LP++LLL ILS L TK VV   V++KRW+ LW  +PSL F           
Sbjct: 13  LSNEDRISQLPEALLLQILSLLPTKEVVAVSVLAKRWRFLWKMVPSLEF----------- 72

Query: 76  SPTIEEKSRTFKKFVARFVSQHQGTHIRNLY---HFGCTNELSLIDFLIRYAQRCNVQQL 135
                     F   V++ +  HQ   +++L+   +FGC   +   + LI  A    +++L
Sbjct: 73  FYYFTNDLERFSYNVSKCLFSHQAPFLQSLHLNMNFGCDPRIMDFEILIGIAFGRQLRKL 132

Query: 136 SINTRYMGYYDWMYLYSSCSSLLSLTMI----CGFVDDWGALVSPSLKVLEI-DCGWTNG 195
            +   Y G  DW    +S  +  +L  +    C  +D    +   SL+ L + +  + N 
Sbjct: 133 VLKV-YSG--DWFKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLNLHEVEFVN- 192

Query: 196 TFQQTPHTGIKTFSGCPNLESLVL---VDYHVHTLTICAPKLKNLELFELLTPCLENVYF 255
                  + +   +GC +LE+LV+    D +V T TI  P L+ L +       +   Y 
Sbjct: 193 -----DESVVNLLAGCISLENLVIHQTTDLNVKTFTIAVPSLQRLTV-------IVEYYE 252

Query: 256 SNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFE-------------LL 315
              +  V + S ++L I  + V+         RTC  ++   L E             +L
Sbjct: 253 EFSVFVVNTPSLKYLKIEGIIVD--------DRTCIIENTPELVEASIIDVSFKVFESIL 312

Query: 316 GVFHNARSLTLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKC 362
           G   + + L+L +  +++  S+P +S  TF++L +L++ T   K    L    +LM    
Sbjct: 313 GSLASVQRLSLKVSLVEIF-SLPPISN-TFYHLTYLELSTYKPKWWNLL----TLMLDTS 341

[Close]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot
Match: Q6NKX3 (F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana OX=3702 GN=At2g04230 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-15
Identity = 74/237 (31.22%), Postives = 120/237 (50.63%), Query Frame = 0


Query: 8   EEEEEMEFLNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDAN 67
           E++ + + +N+ DRIS LPD+LLL ILSSL T+  + T V+SKRW++LWT +P L FD+N
Sbjct: 2   EQKFKTDSMNE-DRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSN 61

Query: 68  SNPYMGESS--PTIEEKSRTFKKFVARFVSQHQGTHIRNLY-HFGCTNELSLIDFLIRYA 127
            NP   + +  PT+      F + V + +S H+   + +L+  F    +   +   I  A
Sbjct: 62  FNPVFDDDNIDPTM------FSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGIWIATA 121

Query: 128 QRCNVQQLSINTRYMGYYDW---MYLYSSCSSLLSLTMICGFVDDWGALVS-PSLKVLEI 187
               V++L +++ Y           L+S   SL  L + C    D+ + V   SL+ L +
Sbjct: 122 FARGVRKLVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYL 181

Query: 188 DCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDY---HVHTLTICAPKLKNLELFEL 235
           D         +   +      GCP+L+ LV+  Y    V T TI +P L+ L + +L
Sbjct: 182 D-----QVHFKDEESVCNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDL 226

[Close]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot
Match: Q3EA38 (Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis thaliana OX=3702 GN=At4g13965 PE=4 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 7.7e-14
Identity = 95/352 (26.99%), Postives = 154/352 (43.75%), Query Frame = 0


Query: 20  DRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSPTI 79
           DRIS LP++L++ ILS L T+  V T V+SK+W+ LW  +P LNFD+             
Sbjct: 14  DRISQLPEALIIQILSLLPTEVAVTTSVLSKQWQFLWKMLPKLNFDSLDQ---------- 73

Query: 80  EEKSRTFKKFVARFVSQHQGTHIRNLY---HFGCTNELSLIDFLIRYAQRCNVQQLSINT 139
             + +TF K V R +  H+   + +L+   H    N ++    LI  A  CN+++L +  
Sbjct: 74  RHEFKTFSKNVKRALLSHKAPVLHSLHLIVHLHLCNSMNTAK-LIGIAFACNLRKLVLEV 133

Query: 140 RYMGYYDWMYLYSSCSSLLSLTMICGFVDDW-GALVSPSLKVLEIDCGWTNGTFQQTPHT 199
               +     LY +C +L +L +    + D   ++   SL+ L +     +    +   +
Sbjct: 134 DGGRFSIPESLY-NCETLDTLELKYSILMDVPSSICLKSLRTLHL-----HYVDFKDNES 193

Query: 200 GIKTFSGCPNLESLVLVDY---HVHTLTICAPKLKNLELFELLT--PCLENVYFSNVLPT 259
            +   SGCPNLE+LV+  Y    V T TI    LK L ++   T  P    V  S  L  
Sbjct: 194 ALNLLSGCPNLENLVVHRYPFSSVKTYTIAVSSLKRLTIYTSSTVDPRAGYVINSPSLTY 253

Query: 260 VKSTSS-EFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLTLPLKEMQV 319
           +K      F  I  V   VE S I  S+   +    SL  +  +F     L +       
Sbjct: 254 LKIVGQIGFCLIENVPELVEASMIVSSQIINKNLLESLTSVKRLFLEFSPLMIKFP---- 313

Query: 320 VSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVIN 362
                  +G  F+ L +L++ T   + +  L    +LM    P L+ L +++
Sbjct: 314 -------AGSIFYQLVYLELLTHEAECLNLL----TLMLNSSPKLQILKLLS 333

[Close]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot
Match: Q9LJF8 (F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-13
Identity = 66/224 (29.46%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSP 77
           + DRIS LP++LLL ILS L  K VV T V+SK W++LW  +P+L FD  +N        
Sbjct: 12  NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENN-------- 71

Query: 78  TIEEKSRTFKKFVARFVSQHQGTHIRNL---YHFGCTNELSLIDFL-IRYAQRCNVQQLS 137
             + +  T+ + V R +  ++   + +L   + FG    + +  ++ I YA+      L 
Sbjct: 72  --QSEDETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLH 131

Query: 138 INTRYMGYYDWMYLYSSCSSLLSLTMICG-FVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
           + +    +     LY +C +L SLT+     VD        SL+ L ++         + 
Sbjct: 132 VESVKGSFIFPTGLY-NCETLESLTLRSWVLVDVPSPACLKSLRTLRLE-----NVDYKY 191

Query: 198 PHTGIKTFSGCPNLESLVLVD---YHVHTLTICAPKLKNLELFE 234
             +     SGCPNLE+LV+       V T TI  P L+ L +++
Sbjct: 192 DDSVYNLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTIYD 219

[Close]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot
Match: Q9FYF4 (Putative F-box protein At1g67390 OS=Arabidopsis thaliana OX=3702 GN=At1g67390 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.9e-13
Identity = 75/249 (30.12%), Postives = 120/249 (48.19%), Query Frame = 0


Query: 19  NDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSPT 78
           +DRIS LPD +L+ IL+SL+T+  ++T V+S RWK +W ++P L+FD  S  Y    S  
Sbjct: 40  DDRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFDLLSATY---ESGL 99

Query: 79  IEEKSRTFKKFVARFVSQHQGTHIR--NLYHFG--CTNE-----------------LSLI 138
           I   S +  + + + ++ H G H+   +++HF   C N                  LSL 
Sbjct: 100 IAALSNSVAESITQVINNHNG-HLMGCSIHHFAHHCVNGVLENWIRLLTLEKNTRFLSLC 159

Query: 139 DFLIRYAQRCNVQQLSIN--------TRYMGYYDWM--YLYSSCSSL--LSLTMICGFVD 198
           + L +  +R NV + S N        T ++  YD +  + +  C +L  L L  I   VD
Sbjct: 160 NKLGK-GRRTNVLRFSPNTFSHPKLATLFLRRYDLVTAHAFKECENLKILKLEGILAEVD 219

Query: 199 DWGALVS--PSLKVLEIDCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDYHVHTLTICA 233
            +  +++  PSLKVL ++C W N        T +K  +   NL+ L L   HV  + + A
Sbjct: 220 VFNTVIASCPSLKVLVLNCMWYN------EKTCLKIHNN--NLKVLHLDCPHVDCIDVSA 275

[Close]

BLAST of Sed0005747 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 6.6e-77
Identity = 177/365 (48.49%), Postives = 230/365 (63.01%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS- 77
           ++DRISLLPDSLL HILS+ NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS 
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSF 74

Query: 78  --PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQL 137
                E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL
Sbjct: 75  NYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQL 134

Query: 138 SINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
            +NT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++ 
Sbjct: 135 CVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERA 194

Query: 198 PHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCLE 257
            + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L             ELLTP L+
Sbjct: 195 NYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTPTLK 254

Query: 258 NVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSL 317
            V F NVLP ++S  SEF  I KV+++++ S      +  Q+  +   +LL V HNA S 
Sbjct: 255 AVNFVNVLPVLES-DSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSF 314

Query: 318 TLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVI 366
           TLP+K  QV+SS   LS   FHN++HL++KT      K  D+ +  + LK P LET+ V+
Sbjct: 315 TLPMKATQVISSYKELS---FHNMRHLRLKT------KESDLLLKHL-LKAPKLETIVVL 365

[Close]

BLAST of Sed0005747 vs. ExPASy TrEMBL
Match: A0A1S3CBU6 (F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.7e-69
Identity = 162/353 (45.89%), Postives = 212/353 (60.06%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS- 77
           ++DRISLLPDSLL HILS+ NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS 
Sbjct: 15  EDDRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSF 74

Query: 78  --PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQL 137
                E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL
Sbjct: 75  NYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQL 134

Query: 138 SINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
            +NT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++ 
Sbjct: 135 CVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERA 194

Query: 198 PHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLELFELLTPCLENVYFSNVLPTVK 257
            + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L                     
Sbjct: 195 NYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-------------------CA 254

Query: 258 STSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLTLPLKEMQVVSS 317
           S   E     KV+++++ S      +  Q+  +   +LL V HNA S TLP+K  QV+SS
Sbjct: 255 SHDMELTFPQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFTLPMKATQVISS 314

Query: 318 VPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLETLDVINEANY 366
              LS   FHN++HL++KT      K  D+ +  + LK P LET+ V+NE  Y
Sbjct: 315 YKELS---FHNMRHLRLKT------KESDLLLKHL-LKAPKLETIVVLNEDIY 335

[Close]

BLAST of Sed0005747 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 155/309 (50.16%), Postives = 196/309 (63.43%), Query Frame = 0


Query: 19  NDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESS-- 78
           +DRISLLPD+LL HILSS NTK VVQTC++SKRWKTLWT IP+LNFD NS  +   SS  
Sbjct: 16  DDRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNS--FSSSSSFN 75

Query: 79  -PTIEEKSRTFKKFVARFVSQHQGTHIRNLYHFGCTN--ELSLIDFLIRYAQRCNVQQLS 138
               E K R+FK F+ R +S+H  T I+ L +    N  E  L++ LI YA   NVQQL 
Sbjct: 76  YDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAGSHNVQQLC 135

Query: 139 INTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQTP 198
           INT  +G Y+W Y +  CSSL+ L M+CGFVDDWG L  PSLK+LEI C W +   ++  
Sbjct: 136 INTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDW-SARDERAN 195

Query: 199 HTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLTPCLEN 258
           + GI  FSGCPNLESLVLVDY   + TI AP+L+N +L             ELLTP L+ 
Sbjct: 196 YDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCASHDMELTFPQVELLTPTLKA 255

Query: 259 VYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARSLT 311
           V F NVLP ++S  SEF  I KV+++++ S      +  Q+  +   +LL V HNA S T
Sbjct: 256 VNFVNVLPVLES-DSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVLHNASSFT 315

[Close]

BLAST of Sed0005747 vs. ExPASy TrEMBL
Match: A0A0A0KSW6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 164/371 (44.20%), Postives = 213/371 (57.41%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSP 77
           + DRISLLPD LL  ILS LNTK VVQTCV+SKRWKTLWT IP+LNFD NS+ Y      
Sbjct: 10  EEDRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSS-YSFSIFK 69

Query: 78  TIEE---KSRTFKKFVARFVSQHQGTHIRNLYHFGCTNELS---LIDFLIRYAQRCNVQQ 137
           T E+   K  +FK F+ R +S+ +   IR L +    N      L DFLI YA+  +VQQ
Sbjct: 70  TEEDDISKQTSFKNFIIRVLSKLRTKSIRKLAYTSSKNRYDLTILADFLISYARSHSVQQ 129

Query: 138 LSINTRYM---GYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGT 197
           L +NT  +    ++D+    ++CSSL+ L ++C F D+   L  PSLK+LEI+  W    
Sbjct: 130 LFLNTFNVIESHFWDFCINVNTCSSLVHLKLVCVFADNLDVLALPSLKILEIESLWLERP 189

Query: 198 FQQTPHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLEL------------FELLT 257
            ++  H  I  F GCPNLESLV   +   T TI APKLKNL+L             +LLT
Sbjct: 190 DKRANHKEITMFPGCPNLESLVFFVHLFQTATISAPKLKNLKLCASPDNDPTFSEVQLLT 249

Query: 258 PCLENVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHN 317
           P LEN+ F NVLPTVKS   EF  I KV++++     R  R  R+   +   ELL VFH 
Sbjct: 250 PTLENISFVNVLPTVKS-DYEFSRIDKVDIQLVSRFERDDRNSRK---SKFRELLSVFHM 309

Query: 318 ARSLTLPLKEMQVVSSVPSLSGITFHNLKHLKIKTGTTKRMKRLDMPISLMALKCPNLET 368
           ARS TLPLK    V S+ +   + FHN+KHL+++T  T  +           LK PNLE 
Sbjct: 310 ARSFTLPLKLTMQVMSLDNFDALCFHNMKHLRLRTKETGLLLE-------QLLKAPNLEN 368

[Close]

BLAST of Sed0005747 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-63
Identity = 148/303 (48.84%), Postives = 189/303 (62.38%), Query Frame = 0


Query: 20  DRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSPTI 79
           DRISLLPD LL HILS++NTK VVQTCV+SKRWKTLWT IP+LNF+  S P+   S    
Sbjct: 118 DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNAC 177

Query: 80  EEKSRTFKKFVARFVSQHQGTHIRNLYH--FGCTNELSLIDFLIRYAQRCNVQQLSINTR 139
             K  +FK F+ R +S+   T I+ L +   G  +E+ L++ LI +A+R NV++L ++T 
Sbjct: 178 RSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLVELLICFARRHNVRELYLDTY 237

Query: 140 YMGYYDWMYLYSSCSSLLSLTMICGFVDDWGALVSPSLKVLEIDCGWTNGTFQQTPHTGI 199
           Y+  YDW Y  S+CSSL  L M+CGFV DWG L  PSL++LEI+            + GI
Sbjct: 238 YISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIE---XEDCEDDADYKGI 297

Query: 200 KTFSGCPNLESLVLVDYHVHTLTICAPKLKNLELF---ELL--------TPCLENVYFSN 259
           + FSGCPNL+SLVL++Y   + TICAPKL+NL L    EL+        T  L NV FSN
Sbjct: 298 RMFSGCPNLKSLVLINYLFESATICAPKLENLVLCSGNELVFSEVELTCTSSLRNVTFSN 357

Query: 260 VLPTVKSTSSEFLSIHKVNVEV-ELSGIRGSRTCRQKSAASLFELLGVFHNARSLTLPLK 309
           +LPTV S + EF  I KVN+EV       G+    Q   A+  EL  VFHNARS  LPL 
Sbjct: 358 MLPTVNS-ALEFSCIQKVNIEVHNYQFSSGNGYFCQNKIAAFSELFRVFHNARSFILPLT 416

[Close]

BLAST of Sed0005747 vs. TAIR 10
Match: AT2G04230.1 (FBD, F-box and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.9e-16
Identity = 74/237 (31.22%), Postives = 120/237 (50.63%), Query Frame = 0


Query: 8   EEEEEMEFLNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDAN 67
           E++ + + +N+ DRIS LPD+LLL ILSSL T+  + T V+SKRW++LWT +P L FD+N
Sbjct: 2   EQKFKTDSMNE-DRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSN 61

Query: 68  SNPYMGESS--PTIEEKSRTFKKFVARFVSQHQGTHIRNLY-HFGCTNELSLIDFLIRYA 127
            NP   + +  PT+      F + V + +S H+   + +L+  F    +   +   I  A
Sbjct: 62  FNPVFDDDNIDPTM------FSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGIWIATA 121

Query: 128 QRCNVQQLSINTRYMGYYDW---MYLYSSCSSLLSLTMICGFVDDWGALVS-PSLKVLEI 187
               V++L +++ Y           L+S   SL  L + C    D+ + V   SL+ L +
Sbjct: 122 FARGVRKLVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYL 181

Query: 188 DCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDY---HVHTLTICAPKLKNLELFEL 235
           D         +   +      GCP+L+ LV+  Y    V T TI +P L+ L + +L
Sbjct: 182 D-----QVHFKDEESVCNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDL 226

[Close]

BLAST of Sed0005747 vs. TAIR 10
Match: AT3G26922.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 7.1e-15
Identity = 66/224 (29.46%), Postives = 107/224 (47.77%), Query Frame = 0


Query: 18  DNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSP 77
           + DRIS LP++LLL ILS L  K VV T V+SK W++LW  +P+L FD  +N        
Sbjct: 12  NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENN-------- 71

Query: 78  TIEEKSRTFKKFVARFVSQHQGTHIRNL---YHFGCTNELSLIDFL-IRYAQRCNVQQLS 137
             + +  T+ + V R +  ++   + +L   + FG    + +  ++ I YA+      L 
Sbjct: 72  --QSEDETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLH 131

Query: 138 INTRYMGYYDWMYLYSSCSSLLSLTMICG-FVDDWGALVSPSLKVLEIDCGWTNGTFQQT 197
           + +    +     LY +C +L SLT+     VD        SL+ L ++         + 
Sbjct: 132 VESVKGSFIFPTGLY-NCETLESLTLRSWVLVDVPSPACLKSLRTLRLE-----NVDYKY 191

Query: 198 PHTGIKTFSGCPNLESLVLVD---YHVHTLTICAPKLKNLELFE 234
             +     SGCPNLE+LV+       V T TI  P L+ L +++
Sbjct: 192 DDSVYNLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTIYD 219

[Close]

BLAST of Sed0005747 vs. TAIR 10
Match: AT1G67390.1 (F-box family protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-14
Identity = 75/249 (30.12%), Postives = 120/249 (48.19%), Query Frame = 0


Query: 19  NDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDANSNPYMGESSPT 78
           +DRIS LPD +L+ IL+SL+T+  ++T V+S RWK +W ++P L+FD  S  Y    S  
Sbjct: 40  DDRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFDLLSATY---ESGL 99

Query: 79  IEEKSRTFKKFVARFVSQHQGTHIR--NLYHFG--CTNE-----------------LSLI 138
           I   S +  + + + ++ H G H+   +++HF   C N                  LSL 
Sbjct: 100 IAALSNSVAESITQVINNHNG-HLMGCSIHHFAHHCVNGVLENWIRLLTLEKNTRFLSLC 159

Query: 139 DFLIRYAQRCNVQQLSIN--------TRYMGYYDWM--YLYSSCSSL--LSLTMICGFVD 198
           + L +  +R NV + S N        T ++  YD +  + +  C +L  L L  I   VD
Sbjct: 160 NKLGK-GRRTNVLRFSPNTFSHPKLATLFLRRYDLVTAHAFKECENLKILKLEGILAEVD 219

Query: 199 DWGALVS--PSLKVLEIDCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDYHVHTLTICA 233
            +  +++  PSLKVL ++C W N        T +K  +   NL+ L L   HV  + + A
Sbjct: 220 VFNTVIASCPSLKVLVLNCMWYN------EKTCLKIHNN--NLKVLHLDCPHVDCIDVSA 275

[Close]

BLAST of Sed0005747 vs. TAIR 10
Match: AT5G44960.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.5e-14
Identity = 100/360 (27.78%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 16  LNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFDA--NSNPYMG 75
           + + D I+ LPDSLL  IL  L TK  V+T V SKRW+ LW  +P L+  +   +NP+  
Sbjct: 1   MEECDYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQFTNPHHE 60

Query: 76  ESSPTIEEKSRTFKKFVARFVSQHQGTHIRN--LYHFGCTNELSLIDFLIRYAQRCNVQQ 135
           E             KF+ RF+  +  + ++   + +F C         LI     C +Q 
Sbjct: 61  EG----------LIKFMDRFMESNCRSRLQKFMIRYFECNGYRDRFMELIGTVVDCGIQH 120

Query: 136 LSINTRYMGYYDWM--YLYSSCSSLLSLTMICGFVDDWGALVS-PSLKVLEI--DCGWTN 195
           L +        D++   +Y S  +L+SL +    + +   +VS P LK+L++   C   +
Sbjct: 121 LYVYMHTCNRVDFIRQNIYKS-KTLVSLKLYNVELKNPDFVVSLPCLKILKLMKICYGED 180

Query: 196 GTFQQTPHTGIKTFSGCPNLESLVLV-DYHVHT------LTICAPKLKNLELFELLTPCL 255
           G     P    K  SGCP LE L L+  + + T      L I AP+LK +  +E      
Sbjct: 181 G-----PLVVEKLISGCPVLEDLELIKPFDILTQDVILFLRIDAPRLKYMTFYE------ 240

Query: 256 ENVYFSNVLPTVKSTSSEFLSIHKVNVEVELSGIRGSRTCRQKSAASLFELLGVFHNARS 315
               F  ++  VK+ SS F    +     E  G+  +   R++  A + + L V  + R 
Sbjct: 241 --SRFDRIM--VKNMSSLFSIEIRAKSSFEYGGLLKAEDPRKR--AIICDFLTVISSVRH 300

Query: 316 LTLPLKEMQVVSSVPSLSGI-TFHNLKHLKIK-TGTTKRMKRLDMPISLMALKCPNLETL 358
           + +    ++ + S   L  I  F NL HL+    GT+ ++    +P  L +  CPNL+ L
Sbjct: 301 MIISGSILEELHSYSKLGWIPQFRNLYHLQASFFGTSLQL----LPTFLES--CPNLKNL 326

[Close]

BLAST of Sed0005747 vs. TAIR 10
Match: AT1G16930.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 75.9 bits (185), Expect = 7.9e-14
Identity = 71/271 (26.20%), Postives = 122/271 (45.02%), Query Frame = 0


Query: 6   MEEEEEEMEFLNDNDRISLLPDSLLLHILSSLNTKGVVQTCVISKRWKTLWTRIPSLNFD 65
           M++E    E   ++DRIS LPDSLL  ILS L+TK  V T V+SKRW+ LW  +P L+ D
Sbjct: 1   MDDETSVKEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLD 60

Query: 66  ANS-----------NPYMGESSPTIEEKSRTFKKF----VARFVSQHQGTHIRNLYHFGC 125
           +N+           N ++G  +    E+ +   +      +RF S       R + HF  
Sbjct: 61  SNNFPDDDVFVSFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNV 120

Query: 126 TNELSLIDFLIRYAQRCNVQQLSINTRYMGYYDWMYLYSSCSSLLSLTMICGFVDDWGAL 185
            NE+   D L++                      + LY SC  L++L +    +D   ++
Sbjct: 121 HNEVDDDDELVKMP--------------------LSLY-SCERLVNLQLYRVALDHPESV 180

Query: 186 VSPSLKVLEIDCGWTNGTFQQTPHTGIKTFSGCPNLESLVLVDYHVHTLTICAPKLKNLE 245
             P +K++ +D             T     SGCP LE L +V     +L +   + ++L+
Sbjct: 181 SLPCVKIMHLDM-----VKYDADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLK 240

Query: 246 LFELLTPCLENVYFSNVLPTVKSTSSEFLSI 262
            F++ +   E+    N + T+ +   E++++
Sbjct: 241 SFKIDSERYES---QNHVVTIDAPRLEYMNL 242

The following BLAST results are available for this feature:

BLAST of Sed0005747 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459617.1	1.4e-76	48.49	PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]	[more]
XP_038890214.1	8.9e-76	50.28	F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]	[more]
XP_038890213.1	1.2e-75	48.28	uncharacterized protein LOC120079853 [Benincasa hispida]	[more]
XP_008459618.1	1.8e-68	45.89	PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]	[more]
KAA0039267.1	3.4e-67	50.16	F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat...	[more]

BLAST of Sed0005747 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJF9	1.1e-15	26.22	F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana OX=3702 GN=At3g26...	[more]
Q6NKX3	4.1e-15	31.22	F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana OX=3702 GN=At2g04...	[more]
Q3EA38	7.7e-14	26.99	Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LJF8	1.0e-13	29.46	F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 ...	[more]
Q9FYF4	2.9e-13	30.12	Putative F-box protein At1g67390 OS=Arabidopsis thaliana OX=3702 GN=At1g67390 PE...	[more]

BLAST of Sed0005747 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB41	6.6e-77	48.49	F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3CBU6	8.7e-69	45.89	F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7TCF1	1.6e-67	50.16	F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KSW6	2.9e-64	44.20	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 ...	[more]
A0A6J1CKA9	2.4e-63	48.84	LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica ch...	[more]

BLAST of Sed0005747 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04230.1	2.9e-16	31.22	FBD, F-box and Leucine Rich Repeat domains containing protein	[more]
AT3G26922.1	7.1e-15	29.46	F-box/RNI-like superfamily protein	[more]
AT1G67390.1	2.1e-14	30.12	F-box family protein	[more]
AT5G44960.1	3.5e-14	27.78	F-box/RNI-like/FBD-like domains-containing protein	[more]
AT1G16930.1	7.9e-14	26.20	F-box/RNI-like/FBD-like domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 6..63 e-value: 3.0E-7 score: 32.3
None	No IPR available	PANTHER	PTHR34223:SF51	OS11G0201299 PROTEIN	coord: 7..364
None	No IPR available	PANTHER	PTHR34223	OS11G0201299 PROTEIN	coord: 7..364
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 121..359
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 21..60 e-value: 6.4E-6 score: 25.9
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 19..67 score: 9.179537
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 19..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005747.1	Sed0005747.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding