Sed0005691 (gene) Chayote v1

Overview
NameSed0005691
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG03: 2854093 .. 2854386 (+)
RNA-Seq ExpressionSed0005691
SyntenySed0005691
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTTCAGCAGCCAATCTAGCTTGTGCTGTTTTGATAGCATATATTACTCTTAGCCTGCTGCCGAAAACCACTGTAAGCTTTGTCGAAACTTCTTCTGCGCCGCCTCTCGAGAAGTCGTTTGAAACCGTAAATGTTGGTTCGAACCACAAGCTGCACCTTTCTGCTTCAACGCACAAAAATGGAGATGATCATGAATTTGAATATCCACCATTATCGAAGCTTTTTCTTAAGCCAAGATATCCATGGCCTAAACGTTACGTACCTAAATCGTCGCCACCTCCATTCTAG

mRNA sequence

ATGGGGTGTTCAGCAGCCAATCTAGCTTGTGCTGTTTTGATAGCATATATTACTCTTAGCCTGCTGCCGAAAACCACTGTAAGCTTTGTCGAAACTTCTTCTGCGCCGCCTCTCGAGAAGTCGTTTGAAACCGTAAATGTTGGTTCGAACCACAAGCTGCACCTTTCTGCTTCAACGCACAAAAATGGAGATGATCATGAATTTGAATATCCACCATTATCGAAGCTTTTTCTTAAGCCAAGATATCCATGGCCTAAACGTTACGTACCTAAATCGTCGCCACCTCCATTCTAG

Coding sequence (CDS)

ATGGGGTGTTCAGCAGCCAATCTAGCTTGTGCTGTTTTGATAGCATATATTACTCTTAGCCTGCTGCCGAAAACCACTGTAAGCTTTGTCGAAACTTCTTCTGCGCCGCCTCTCGAGAAGTCGTTTGAAACCGTAAATGTTGGTTCGAACCACAAGCTGCACCTTTCTGCTTCAACGCACAAAAATGGAGATGATCATGAATTTGAATATCCACCATTATCGAAGCTTTTTCTTAAGCCAAGATATCCATGGCCTAAACGTTACGTACCTAAATCGTCGCCACCTCCATTCTAG

Protein sequence

MGCSAANLACAVLIAYITLSLLPKTTVSFVETSSAPPLEKSFETVNVGSNHKLHLSASTHKNGDDHEFEYPPLSKLFLKPRYPWPKRYVPKSSPPPF
Homology
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BLAST of Sed0005691 vs. ExPASy TrEMBL
Match: A0A0A0KBD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058730 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.6e-06
Identity = 45/93 (48.39%), Postives = 51/93 (54.84%), Query Frame = 0 

Query: 19 LSLLPKTTVSFVETSS--APPLE------------KSFETVNVGSNHKLHLSASTHKNGD 78
          LS+ P  TVS V  S   +PPL               F+ V V S  KLH+  S  KNGD
Sbjct: 5  LSMRPAITVSSVNLSPRLSPPLPPLPARISGEALVNRFDCVKVRS--KLHV-GSLGKNGD 64

Query: 79 DHEFEYPPLSKLFLKPRYPWPKRYVPKSSPPPF 98
            EF+ P LSKL L PR PWP+RY PKS PPPF
Sbjct: 65 G-EFKLPLLSKLLLMPRLPWPRRYAPKSPPPPF 93

The following BLAST results are available for this feature:
BLAST of Sed0005691 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0005691 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0005691 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBD34.6e-0648.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058730 PE=4 SV=1[more]
BLAST of Sed0005691 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0005691.1Sed0005691.1mRNA